lowQualScore : 111111111111111111111111111111111111111111111111 111111111111111111111111111111111111
lowQualScore : 111111111111111111111111111111111111111111111111 2 1 111111111111111111111111111111111111 3333333 2222222 55555 222 222222 2222222222222222 11111 111111 9999999999999999999999999 1 4
lowQualScore : 000000000000000000000000000000000000000000000000 0 6 1 44 5 3 777777777777777777777777777777777777 5 99 0000000 5 3 0000000 8 00000 2 66 1 66 1 666 66 3 5 999999 2222222222222222 00000 111111 4444444444444444444444444 3 5 6 0 6 6
lowQualScore : ................................................ . . . .. . . .................................... . .. ....... . . ....... . ..... . .. . .. . ... .. . . ...... ................ ..... ...... ......................... . . . . . .
lowQualScore : 000000000000000000000000000000000000000000000000 0 0 0 66 0 0 444444444444444444444444444444444444 0 00 4444444 2 8 2222222 0 99999 0 99 1 99 1 111 99 4 0 000000 8888888888888888 22222 555555 5555555555555555555555555 7 0 0 0 0 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATAAGGAAGCTTAAATATTCTTGAACTGTTTCAGCAANTTNTTTTTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA-----------A-AATT-T----T------------ANACAAATCACGCTCGAAGTNTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GTGGATAAAGTGTCTT--GCTCA--AGGACACCACAC-AT--AGCC-GTG--G-CGGAGG--A--T---CGA----ACCCAC-GA--CCCT-CCGA-TCCT--------TGGCCA---CT------CTACCACTNGACCATGCGATCCACA-ACTTCAA
Reference ( gi|1 ) : CTATAGAAAATAAACTACCGTAATCATGAAAAATTATAATTTTTTTGCAAAATTACTGTAAATATGTAGCAGCATCGGCTCCCTGAGAATTATTAGAATACAACGATTATTAAAAAAGCTATGGCAAAAGTCTACAAACTTTCCGATCCCCCTCGTATATGGTATCACTTAATATGTTTTTCTGTTACCGGTAATTAT-ATATTACCAAGCCCAAACAC-----AATTATACCAACACTTTATGTCTTT-GTTTTAAACTTATCTATTTTACATCGATTCTAA-----------ACAACT------T------------AGACAAATTGTGCTTGAGGTCTTTCTAGGTAGAACTTGTAC--TAAGCA-TATGAGGGGATAAAGTGTCTT--GCTCA--AGGACACCACCA-AT--AGCC-ATG--G-CTGAGG--A--T---TGA----ACCCAC-AA--CCCT-CTGA-TCCT--------TG-------CT------CTACCACTGGACCATGTGACCCACACATTCCAACATTTTATGTAAAACTTACCAGAAACCTGTAGATTCCCAGAAATGTTTCAATTCTCCTACTCTCT
gi|4 : ATTATGACATAAGGAAGCTTAAATATTCTTGAACTGTTTCAGCAAGTTTTTTTTTTAGTTTTAAACTTACTTATTTTACCTCAGTTGTGATG---------ATGAAT------G------------ACACAAATCACACTGAAGGTGTTTCTGGGTAGAACCAGTAA--TAAGCACTATGCAG--AT---GTGTCTA--GCTCA--AGTACACCACAC-AT--AGCA-GTG--G-TGGAGG--A--T---CTA----ACCTAC-GT--TCCT-CCCA-TCCTGGGTTCCATG-------CT------CTACCACTGGACCA
gi|3 : cttattaaggtatgtttatTTTAT---TTT-GTTCTAAACTTATTAATTTTACATAGATTGTGAAATAAGTTCTTACAACT------T------------AGACAACTCATGCT-------CCTGTAGGTAG-ACTAGTTCTGTAAGCA-TAT--GTAAATAACGTGTCTTTAACTTA--AGAACGTCATGC-GT--A--T-ATGTAG-CGGGGGAAA--T---TGA----ACCCAT-GG--CCcttgcttcagcaacaagtccatgatcatgattagtcagccagttgttcaagttcaataaagcaaa
gi|6 : ctcatattgaaccaagcagaatctgaTTGAAACTCATTTGTTTTACATAGATTGTAA-----------A--ATTAT----T------------ATACAAATTACGCTCAAA-TATTTCTTAGTGGAACTAATAC--TAAACA-TATTAAT--ACAAAGTGCCCT--GATCA--AGAACACTACAC-AT--AGCC-GTG--G-C-GAGG--AGAC---T-A----ACCCGC-AA--CCCT-TCGG-TCgtgctatctaatgatcttcacatcactgttttgtcaaatactttgctaagttatatttgaaaccaaattagcaggctgtaaagtggacagaagcaatagaaatgtaacaggagggggttacaaatagttacataaaaggttggcatgaacttttccatgcata
gi|2 : aaTTTAAATTTATTTGTTTTATTTCTATTATGA-----------A-AGTTGTTTCAT------------ATACAAATCACGCTCGCAGTCTTGCTGAGTAAAACTAAAAC--TAAGCA-TAT--GTGGAACAGGTAT-TT--GTTCA--AGGACACCACAC-AT--AGCCGAGG--G---GAGG--A--T---CGA----ACCTAC-GA--TCCT-CCAA-Tggtggtttgatgctttattactacgcctgtttcgttctgtcgtttccgtgatttgttttgacatgatccgttcaaaattataatattgct
gi|5 : aactgtaaaaaattaaaatacactgtattgtgacgaatgtacactacttgttttcaacaattactacaaatgttagagccagggtaacttccaaccatttataataaatacgattctttacaaaaatagaaatggaatgacattcactgaagtattttcagtctgtatgcatcagaaaacctcaaaaactgtacaggcatgtgactcattcagTTATTTATTACACATTAATTATGA-----------AAAATT------TCTTACATTACGTAGACAAATCATGCATGAAATTTTTCTGGCTTGGACAAGAAT--TAAGCA-TAT--GTGGATAAAATGTCTT--GTCCATTAGAACTTC-CCACAT--ATCC-AAG--A-CAGTGG--A--T---CAA----ACTCAC-AG--CCTT-
gi|7 : aaattaattcattcttGGATAAAGTACATT--GTCCA--ATGACACTACAC-AT--TGCT-GCG--A-TAGAGG--A--T---GGG----ACCAAC-GATCCCCTCCTGA-TCCT--------TGGC-----CTGATGACCTACCACAAGAACATGC-ATCCAtcacttaataataaatacattcactttaagtataaatttgttttaaaggtaacactaaattgaatattgaaagtgaataaagaaatgtgac
gi|8 : GATGAAATGTCTT--ATACA--AGGACACAACAT-AT--GATC-ATG--G-ACAAGGC-A--CAGATGACCTTACCCACTGA--TTCT--TCA-TCCC--------TGGACA---CT------CTATTACTCAACCATATGATCCACA-ACTTCAAatgttttgattatgatttagtggctcttttctctacgtcttctgttaggtctaatatattttttttatttcttgttttgattact
gi|11 : AAAATGCCTT--GCTCA--AAAACATCAGAA-ATAAAACC-ATG--ATCAGGGA--A--T---CCA----TCCCAG-AA--CCCT-CCAATTCCT--------TGTCCAAAACT------CTACCATTa
7 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): TAACTGATAAAATTAAAATAAAACATTGTATTGTTATATATGCGCAATATGTTTTGGACGGAACAACCACTACTGTTAATACTAGGATTTTCAACCATTTACAAGAAAC
Unaligned ( gi|10 ): AATTATAAGGCAATAAGTCGATAGAACCAATAGAAAAACAGTATGGGTACATAGGTAACCTATTCAAAAGTTGCTGTATGAATTGTTCCATGCATA
Unaligned ( gi|12 ): TTAATAGGCTTTAAAGTCGATAGAAGCAACAGAAAAAAAAACAGGAGGGTTACAAATAGGTAACCTACTAAAAAGTTGAAGT
Unaligned ( gi|13 ): TCGATAGAAGCAACTGAAAAGCAGGACAGGTACAAGTAGGTGATATACTTAAAAGTTACAGTATG
Unaligned ( gi|14 ): ATTCTACACTGATTGTGAAACAGGTTCATACAAATTAGACTCGAATCCTCCTGTAG
Unaligned ( gi|15 ): AAAATGAAAAACAGGAGGGGTACAAGTAGGTAACCTACTTAAAAATTGAAGTA
Unaligned ( gi|16 ): AAAGCAAAAGAAAAACAGGAGGGATACAAATAGGAAACCTACTTAAAAGT
Alignments
lowQualScore : 11 55555555 11111 7777777777777777777777777777777 1 2222222222 11 5555555555555 11 1 1 1
lowQualScore : 44 7 3 1 55555555 99 44 1 11111 5 1 7777777777777777777777777777777 1 0 1 0 3 1 99 6 99 1 0 66 66 66 5555555555 66 4 2 4 66 00 5 1111111111111 0 1 33 5 0 3
lowQualScore : .. . . . ........ .. .. . ..... . . ............................... . . . . . . .. . .. . . .. .. .. .......... .. . . . .. .. . ............. . . .. . . .
lowQualScore : 00 7 7 0 00000000 33 55 0 55555 6 7 3333333333333333333333333333333 0 4 7 1 0 7 22 7 22 8 8 11 11 11 1111111111 11 4 9 4 11 99 0 8888888888888 8 0 88 0 0 3
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCANNTTATTTTTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA---A--AG-TT--------T-----------TANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GCGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC--A--A--CTCTACCACTGGACCA--TGCGATCCA-CA-ACTCCAA
Reference ( family-1204 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATAAGGAAGCTTAAATATTCTTGAACTGTTTCAGCAANTTNTTTTTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA---A--AA-TT--------T-----------TANACAAATCACGCTCGAAGTNTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GTGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC-----A--CTCTACCACTNGACCA--TGCGATCCA-CA-ACTTCAA
gi|1 : ATTAT-ATATTACCAAGCCCAAACAC-----AATTATACCAACACTTTATGTCTTT-GTTTTAAACTTATCTATTTTACATCGATTCTAA---A--CA-AC--------T-----------TAGACAAATTGTGCTTGAGGTCTTTCTAGGTAGAACTTGTAC--TAAGCA-TATGAGGGGATAAAGTGTCTT--GCTCA--AGGACACCACCAAT--AGCCATGG--------CTGAGG--AT-TGAACCCAC-AA--CCCTCT-GA-TCCTTG-------------CTCTACCACTGGACCA--TGTGACCCA-CACATTCCAA
gi|11 : ctatagaaaataaactaccgtaatcatgaaaaattataatttttttgcaaaattactgtaaatatgtagcagcatcggctccctgagaattattagaatacaacgattattaaaaaagctatggcaaaagtctacaaactttccgatccccctcgtatatggtatcacttaatatgtttttctgttaccggtaAAAATGCCTT--GCTCA--AAAACATCAGAAATAAAACCATGAT-------CAGGGA--AT-CCATCCCAG-AA--CCCTCC-AATTCCTTGT--CCAAA--A--CTCTACCATTcattttatgtaaaacttaccagaaacctgtagattcccagaaatgtttcaattctcctactctct
gi|14 : aATTCTACACTGATTGTGA---AACAG-GT--------T-----------CATACAAATTAGACTCGAA-TCCTCCTGa
gi|2 : TATG-CATCAGAAAACCTCAA-------AAACTGTACAGGCATGTGACTCATTCAGTTT-AAATTTATTTGTTTTATTTCTATTATGA---A--AG-TTGTT-----TCA---------TATACAAATCACGCTCGCAGTCTTGCTGAGTAAAACTAAAAC--TAAGCA-TAT--GTGGAACAGGTAT-TT--GTTCA--AGGACACCACACAT--AGCCGAGG---------GGAGG--AT-CGAACCTAC-GA--TCCTCC-AA-Ttag
gi|3 : aactgtaaaaaattaaaatacactgtattgtgacgaatgtacactacttgttttcaacaattactacaaatgttagagccagggtaacttccaaccatttataataaatacgattctttacaaaaatagaaatggaatgacattcactgaagtattttcagtctgATTTATTTT----GTTCTAAACTTATTAATTTTACATAGATTGTGAAATA--AG-TTCTTACAACT-----------TAGACAACTCATGCTC-------CTGTAGGTAG-ACTAGTTCTGTAAGCA-TAT--GTAAATAACGTGTCTTTAACTTA--AGAACGTCATGCGT--ATATGTAG--------CGGGGGAAAT-TGAACCCAT-GG--CCGTGC-TA-TC
gi|4 : ctcatattgaaccaagcagaatctgATTATGACATAAGGAAGCTTAAATATTCTTGAACTGTTTCAGCAAGTTTTTTTTTTAGTTTTAAACTTACTTATTTTACCTCAGTTGTGA---T--GA-TGAA------T-----------GACACAAATCACACTGAAGGTGTTTCTGGGTAGAACCAGTAA--TAAGCACTAT--GCAGAT---GTGTCTA--GCTCA--AGTACACCACACAT--AGCAGTGG--------TGGAGG--AT-CTAACCTAC-GT--TCCTCC-CA-TCCTGGGTTCC-----ATGCTCTACCACTGGACCACTTGC--TTCAGCA-ACtaatgatcttcacatcactgttttgtcaaatactttgctaagttatatttgaaaccaaattagcaggctgtaaagtggacagaagcaatagaaatgtaacaggagggggttacaaatagttacataaaaggttggcatgaacttttccatgcata
gi|5 : cttattaaggtatgtttatTTATTTATTACACATTAATTATGA---A--AAATT--------TCTTACATTACGTAGACAAATCATGCATGAAATTTTTCTGGCTTGGACAAGAAT--TAAGCA-TAT--GTGGATAAAATGTCTT--GTCCATTAGAACTTCCCACAT--ATCCAAGA--------CAGTGG--AT-CAAACTCAC-AG--CCTTTC-aagtccatgatcatgattagtcagccagttgttcaagttcaataaagcaaa
gi|6 : aaattaattcattcttTTGAAACTCATTTGTTTTACATAGATTGT-A---A--AA-TTA-------T-----------TATACAAATTACGCTCAAA-TATTTCTTAGTGGAACTAATAC--TAAACA-TAT--TAATACAAAGTGCCCT--GATCA--AGAACACTACACAT--AGCCGTGG--------C-GAGG--AGACTAACCCGC-AA--CCCTTC-GG-TCacttaataataaatacattcactttaagtataaatttgttttaaaggtaacactaaattgaatattgaaagtgaataaagaaatgtgac
gi|7 : aaGGATAAAGTACATT--GTCCA--ATGACACTACACAT--TGCTGCGA--------TAGAGG--AT-GGGACCAAC-GATCCCCTCCTGA-TCCTTGG--CCTGATGA--C-CTACCACAAGAACA--TGC-ATCCA-ggtggtttgatgctttattactacgcctgtttcgttctgtcgtttccgtgatttgttttgacatgatccgttcaaaattataatattgct
gi|8 : GATGAAATGTCTT--ATACA--AGGACACAACATAT--GATCATGGACAAGGCACAGATG--AC-CTTACCCACTGA--TTCTTC--A-TCCCTGG--AC-----A--CTCTATTACTCAACCA--TATGATCCA-CA-ACTTCAAatgttttgattatgatttagtggctcttttctctacgtcttctgttaggtctaatatattttttttatttcttgttttgattact
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TAACTGATAAAATTAAAATAAAACATTGTATTGTTATATATGCGCAATATGTTTTGGACGGAACAACCACTACTGTTAATACTAGGATTTTCAACCATTTACAAGAAAC
Unaligned ( gi|10 ): AATTATAAGGCAATAAGTCGATAGAACCAATAGAAAAACAGTATGGGTACATAGGTAACCTATTCAAAAGTTGCTGTATGAATTGTTCCATGCATA
Unaligned ( gi|12 ): TTAATAGGCTTTAAAGTCGATAGAAGCAACAGAAAAAAAAACAGGAGGGTTACAAATAGGTAACCTACTAAAAAGTTGAAGT
Unaligned ( gi|13 ): TCGATAGAAGCAACTGAAAAGCAGGACAGGTACAAGTAGGTGATATACTTAAAAGTTACAGTATG
Unaligned ( gi|15 ): AAAATGAAAAACAGGAGGGGTACAAGTAGGTAACCTACTTAAAAATTGAAGTA
Unaligned ( gi|16 ): AAAGCAAAAGAAAAACAGGAGGGATACAAATAGGAAACCTACTTAAAAGT
Alignments
lowQualScore : 11 444444 7777777777777777777777777777777 1 2222222222 11 555555555555 11 1 1 1 222
lowQualScore : 44 1 1 7 444444 0 22 3 7 9 5 1 7777777777777777777777777777777 1 0 1 0 3 1 99 6 9999 0 66 66 66 5555555555 66 4 2 4 66 00 5 444444444444 0 0 33 5 0 3 333
lowQualScore : .. . . . ...... . .. . . . . . ............................... . . . . . . .. . .... . .. .. .. .......... .. . . . .. .. . ............ . . .. . . . ...
lowQualScore : 00 0 0 3 000000 7 00 0 8 8 6 7 9999999999999999999999999999999 0 4 7 1 0 7 22 7 7777 8 11 11 11 1111111111 11 4 9 4 11 99 0 444444444444 8 2 88 0 0 3 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCACGTNATTTNTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA---A--AG-TT--------T-----------TANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GCGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC----A-ACTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
Reference ( family-1204 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCANNTTATTTTTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA---A--AG-TT--------T-----------TANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GCGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC----A-ACTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
gi|1 : ATTAT-ATATTACCAAGCCCAAACAC-----AATTATACCAACACTTTATGTCTTT-GTTTTAAACTTATCTATTTTACATCGATTCTAA---A--CA-AC--------T-----------TAGACAAATTGTGCTTGAGGTCTTTCTAGGTAGAACTTGTAC--TAAGCA-TATGAGGGGATAAAGTGTCTT--GCTCA--AGGACACCACCAAT--AGCCATGG--------CTGAGG--AT-TGAACCCAC-AA--CCCTCT-GA-TCCTTG------------CTCTACCACTGGACCA--TGTGACCCA-CACAT---TCCAA
gi|11 : ctatagaaaataaactaccgtaatcatgaaaaattataatttttttgcaaaattactgtaaatatgtagcagcatcggctccctgagaattattagaatacaacgattattaaaaaagctatggcaaaagtctacaaactttccgatccccctcgtatatggtatcacttaatatgtttttctgttaccggtaAAAATGCCTT--GCTCA--AAAACATCAGAAATAAAACCATGAT-------CAGGGA--AT-CCATCCCAG-AA--CCCTCC-AATTCCTTGT--CCAA--A-ACTCTACCATTcattttatgtaaaacttaccagaaacctgtagattcccagaaatgtttcaattctcctactctct
gi|14 : aATTCTACACTGATTGTGA---AACAG-GT--------T-----------CATACAAATTAGACTCGAA-TCCTCCTGa
gi|2 : TATG-CATCAGAAAACCT---CAA----AAACTGTACAGGCATGTGACTCATTCAGTTT-AAATTTATTTGTTTTATTTCTATTATGA---A--AG-TTGTT-----TCA---------TATACAAATCACGCTCGCAGTCTTGCTGAGTAAAACTAAAAC--TAAGCA-TAT--GTGGAACAGGTAT-TT--GTTCA--AGGACACCACACAT--AGCCGAGG---------GGAGG--AT-CGAACCTAC-GA--TCCTCC-AA-Ttag
gi|3 : aactgtaaaaaattaaaatacactgtattgtgacgaatgtacactacttgttttcaacaattactacaaatgttagagccagggtaacttccaaccatttataataaatacgattctttacaaaaatagaaatggaatgacattcactgaagtattttcagtctgATCTGATTTATTTTGTTCTAAACTTATTAATTTTACATAGATTGTGAAATA--AG-TTCTTACAACT-----------TAGACAACTCATGCTC-------CTGTAGGTAG-ACTAGTTCTGTAAGCA-TAT--GTAAATAACGTGTCTTTAACTTA--AGAACGTCATGCGT--ATATGTAG--------CGGGGGAAAT-TGAACCCAT-GG--CCGTGC-TA-TC
gi|4 : ctcatattgaaccaagcagaATTATGACATAAGGAAGCTTAAATATTCTTGAACTGTTTCAGCAAGTTTTTTTTTTAGTTTTAAACTTACTTATTTTACCTCAGTTGTGATG-A--TG-AA--------T-----------GACACAAATCACACTGAAGGTGTTTCTGGGTAGAACCAGTAA--TAAGCACTAT--GCAGAT---GTGTCTA--GCTCA--AGTACACCACACAT--AGCAGTGG--------TGGAGG--AT-CTAACCTAC-GT--TCCTCC-CA-TCCTGGGTTCC----ATGCTCTACCACTGGACCACTTGC--TTCAGCA-ACAAGTCCAtaatgatcttcacatcactgttttgtcaaatactttgctaagttatatttgaaaccaaattagcaggctgtaaagtggacagaagcaatagaaatgtaacaggagggggttacaaatagttacataaaaggttggcatgaacttttccatgcata
gi|5 : cttattaaggtatgtttatTTATTTATTACACATTAATTATGA---A--AAATT--------TCTTACATTACGTAGACAAATCATGCATGAAATTTTTCTGGCTTGGACAAGAAT--TAAGCA-TAT--GTGGATAAAATGTCTT--GTCCATTAGAACTTCCCACAT--ATCCAAGA--------CAGTGG--AT-CAAACTCAC-AG--CCTTTC-tgatcatgattagtcagccagttgttcaagttcaataaagcaaa
gi|6 : aaattaattcattcttTTGAAACTCATTTGTTTTACATAGATTGTAA---A--AT-TA--------T-----------TATACAAATTACGCTCAAA-TATTTCTTAGTGGAACTAATAC--TAAACA-TAT--TAATACAAAGTGCCCT--GATCA--AGAACACTACACAT--AGCCGTGG--------C-GAGG--AGACTAACCCGC-AA--CCCTTC-GG-TCacttaataataaatacattcactttaagtataaatttgttttaaaggtaacactaaattgaatattgaaagtgaataaagaaatgtgac
gi|7 : aaGGATAAAGTACATT--GTCCA--ATGACACTACACAT--TGCTGCGA--------TAGAGG--AT-GGGACCAAC-GATCCCCTCCTGA-TCCTTGG--CCTGATG-AC-CTACCACAAGAACA--TGC-ATCCA-ggtggtttgatgctttattactacgcctgtttcgttctgtcgtttccgtgatttgttttgacatgatccgttcaaaattataatattgct
gi|8 : GATGAAATGTCTT--ATACA--AGGACACAACATAT--GATCATGGACAAGGCACAGATG--AC-CTTACCCACTGA--TTCTTC--A-TCCCTGG--AC----A--CTCTATTACTCAACCA--TATGATCCA-CA-AC---TTCAAatgttttgattatgatttagtggctcttttctctacgtcttctgttaggtctaatatattttttttatttcttgttttgattact
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TAACTGATAAAATTAAAATAAAACATTGTATTGTTATATATGCGCAATATGTTTTGGACGGAACAACCACTACTGTTAATACTAGGATTTTCAACCATTTACAAGAAAC
Unaligned ( gi|10 ): AATTATAAGGCAATAAGTCGATAGAACCAATAGAAAAACAGTATGGGTACATAGGTAACCTATTCAAAAGTTGCTGTATGAATTGTTCCATGCATA
Unaligned ( gi|12 ): TTAATAGGCTTTAAAGTCGATAGAAGCAACAGAAAAAAAAACAGGAGGGTTACAAATAGGTAACCTACTAAAAAGTTGAAGT
Unaligned ( gi|13 ): TCGATAGAAGCAACTGAAAAGCAGGACAGGTACAAGTAGGTGATATACTTAAAAGTTACAGTATG
Unaligned ( gi|15 ): AAAATGAAAAACAGGAGGGGTACAAGTAGGTAACCTACTTAAAAATTGAAGTA
Unaligned ( gi|16 ): AAAGCAAAAGAAAAACAGGAGGGATACAAATAGGAAACCTACTTAAAAGT
Alignments
lowQualScore : 11 444444 7777777777777777777777777777777 1 2222222222 11 555555555555 11 1 1 1 222
lowQualScore : 44 1 1 7 444444 0 3 1 1 9 5 1 7777777777777777777777777777777 1 0 1 0 3 1 99 6 9999 0 66 66 66 5555555555 66 4 2 4 66 00 5 444444444444 0 0 33 5 0 3 333
lowQualScore : .. . . . ...... . . . . . . . ............................... . . . . . . .. . .... . .. .. .. .......... .. . . . .. .. . ............ . . .. . . . ...
lowQualScore : 00 0 0 3 000000 7 7 0 0 8 6 7 9999999999999999999999999999999 0 4 7 1 0 7 22 7 7777 8 11 11 11 1111111111 11 4 9 4 11 99 0 444444444444 8 2 88 0 0 3 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCACGTNATTTNTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA---A--AG-TT--------T-----------TANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GCGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC----A-ACTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
Reference ( family-1204 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCACGTNATTTNTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA---A--AG-TT--------T-----------TANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GCGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC----A-ACTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
gi|1 : ATTAT-ATATTACCAAGCCCAAACAC-----AATTATACCAACACTTTATGTCTTT-GTTTTAAACTTATCTATTTTACATCGATTCTAA---A--CA-AC--------T-----------TAGACAAATTGTGCTTGAGGTCTTTCTAGGTAGAACTTGTAC--TAAGCA-TATGAGGGGATAAAGTGTCTT--GCTCA--AGGACACCACCAAT--AGCCATGG--------CTGAGG--AT-TGAACCCAC-AA--CCCTCT-GA-TCCTTG------------CTCTACCACTGGACCA--TGTGACCCA-CACAT---TCCAA
gi|11 : ctatagaaaataaactaccgtaatcatgaaaaattataatttttttgcaaaattactgtaaatatgtagcagcatcggctccctgagaattattagaatacaacgattattaaaaaagctatggcaaaagtctacaaactttccgatccccctcgtatatggtatcacttaatatgtttttctgttaccggtaAAAATGCCTT--GCTCA--AAAACATCAGAAATAAAACCATGAT-------CAGGGA--AT-CCATCCCAG-AA--CCCTCC-AATTCCTTGT--CCAA--A-ACTCTACCATTcattttatgtaaaacttaccagaaacctgtagattcccagaaatgtttcaattctcctactctct
gi|14 : aATTCTACACTGATTGTGA---AACAG-GT--------T-----------CATACAAATTAGACTCGAA-TCCTCCTGa
gi|2 : TATG-CATCAGAAAACCT---CAA----AAACTGTACAGGCATGTGACTCATTCAGTTT-AAATTTATTTGTTTTATTTCTATTATGA---A--AG-TTGTT-----TCA---------TATACAAATCACGCTCGCAGTCTTGCTGAGTAAAACTAAAAC--TAAGCA-TAT--GTGGAACAGGTAT-TT--GTTCA--AGGACACCACACAT--AGCCGAGG---------GGAGG--AT-CGAACCTAC-GA--TCCTCC-AA-Ttag
gi|3 : aactgtaaaaaattaaaatacactgtattgtgacgaatgtacactacttgttttcaacaattactacaaatgttagagccagggtaacttccaaccatttataataaatacgattctttacaaaaatagaaatggaatgacattcactgaagtattttcagtctgTGATTTATTTTGTTCTAAACTTATTAATTTTACATAGATTGTGAAATA--AG-TTCTTACAACT-----------TAGACAACTCATGCTC-------CTGTAGGTAG-ACTAGTTCTGTAAGCA-TAT--GTAAATAACGTGTCTTTAACTTA--AGAACGTCATGCGT--ATATGTAG--------CGGGGGAAAT-TGAACCCAT-GG--CCGTGC-TA-TC
gi|4 : ctcatattgaaccaagcagaatcATTATGACATAAGGAAGCTTAAATATTCTTGAACTGTTTCAGCAAGTTTTTTTTTTAGTTTTAAACTTACTTATTTTACCTCAGTTGTGATG-A--TG-AA--------T-----------GACACAAATCACACTGAAGGTGTTTCTGGGTAGAACCAGTAA--TAAGCACTAT--GCAGAT---GTGTCTA--GCTCA--AGTACACCACACAT--AGCAGTGG--------TGGAGG--AT-CTAACCTAC-GT--TCCTCC-CA-TCCTGGGTTCC----ATGCTCTACCACTGGACCACTTGC--TTCAGCA-ACAAGTCCAtaatgatcttcacatcactgttttgtcaaatactttgctaagttatatttgaaaccaaattagcaggctgtaaagtggacagaagcaatagaaatgtaacaggagggggttacaaatagttacataaaaggttggcatgaacttttccatgcata
gi|5 : cttattaaggtatgtttatTTATTTATTACACATTAATTATGA---A--AAATT--------TCTTACATTACGTAGACAAATCATGCATGAAATTTTTCTGGCTTGGACAAGAAT--TAAGCA-TAT--GTGGATAAAATGTCTT--GTCCATTAGAACTTCCCACAT--ATCCAAGA--------CAGTGG--AT-CAAACTCAC-AG--CCTTTC-tgatcatgattagtcagccagttgttcaagttcaataaagcaaa
gi|6 : aaattaattcattcttTTGAAACTCATTTGTTTTACATAGATTGTAA---A--AT-TA--------T-----------TATACAAATTACGCTCAAA-TATTTCTTAGTGGAACTAATAC--TAAACA-TAT--TAATACAAAGTGCCCT--GATCA--AGAACACTACACAT--AGCCGTGG--------C-GAGG--AGACTAACCCGC-AA--CCCTTC-GG-TCacttaataataaatacattcactttaagtataaatttgttttaaaggtaacactaaattgaatattgaaagtgaataaagaaatgtgac
gi|7 : aaGGATAAAGTACATT--GTCCA--ATGACACTACACAT--TGCTGCGA--------TAGAGG--AT-GGGACCAAC-GATCCCCTCCTGA-TCCTTGG--CCTGATG-AC-CTACCACAAGAACA--TGC-ATCCA-ggtggtttgatgctttattactacgcctgtttcgttctgtcgtttccgtgatttgttttgacatgatccgttcaaaattataatattgct
gi|8 : GATGAAATGTCTT--ATACA--AGGACACAACATAT--GATCATGGACAAGGCACAGATG--AC-CTTACCCACTGA--TTCTTC--A-TCCCTGG--AC----A--CTCTATTACTCAACCA--TATGATCCA-CA-AC---TTCAAatgttttgattatgatttagtggctcttttctctacgtcttctgttaggtctaatatattttttttatttcttgttttgattact
blockSeqs : GA C A A TTCTTG T G A A T T AAAATTTCTTACATTACG T G G C A TG C GT TA TT AA ACAAGGCACA AA A C T TC TG T GCCTGATGA CT G G . AAG
blockSeqs : G A G . AA A G A T T C AATAAGTTCTTACAACT T G G C A . . GT . . . TCA . . G . . A . GTTCCATG . . . . .
blockSeqs : T T A G A AAGTTGTTTCA G A A G G . . GC . . . CG . . G . . A . TCCAAAA . . .
blockSeqs : . C AACAGGTT C G . T A . . GT . . . TG . . T . . T . GACA
blockSeqs : T TGATGAAT G A . A . . . TA . . . CA . . A . . C .
blockSeqs : A AATTAT T . . . . . . TA . . T . . G .
blockSeqs : . . . G . . G . . . .
blockSeqs : . . . C . . T . .
blockSeqCons : AAAGTTTTACGAT****************** GT** GNCAA*******
originalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCACGTNATTTNTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGA---A--AG-TT--------T-----------TANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TAT--GCGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC----A-ACTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
finalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCACGTNATTTNTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGAAAAGTTTTACGAT------------------TANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TATGT--GGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGGNCAA-------CTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TAACTGATAAAATTAAAATAAAACATTGTATTGTTATATATGCGCAATATGTTTTGGACGGAACAACCACTACTGTTAATACTAGGATTTTCAACCATTTACAAGAAAC
Unaligned ( gi|10 ): AATTATAAGGCAATAAGTCGATAGAACCAATAGAAAAACAGTATGGGTACATAGGTAACCTATTCAAAAGTTGCTGTATGAATTGTTCCATGCATA
Unaligned ( gi|12 ): TTAATAGGCTTTAAAGTCGATAGAAGCAACAGAAAAAAAAACAGGAGGGTTACAAATAGGTAACCTACTAAAAAGTTGAAGT
Unaligned ( gi|13 ): TCGATAGAAGCAACTGAAAAGCAGGACAGGTACAAGTAGGTGATATACTTAAAAGTTACAGTATG
Unaligned ( gi|15 ): AAAATGAAAAACAGGAGGGGTACAAGTAGGTAACCTACTTAAAAATTGAAGTA
Unaligned ( gi|16 ): AAAGCAAAAGAAAAACAGGAGGGATACAAATAGGAAACCTACTTAAAAGT
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 11 444444 0000000000000000000000000 1 111 2222222222 11 555555555555 11 1 1 1 222
lowQualScore : 44 1 1 7 444444 0 3 1 1 9 5 1 2222222222222222222222222 1 0 1 0 3 1 99 6 111 0 66 66 66 5555555555 66 4 2 4 66 00 5 888888888888 0 0 33 5 0 3 333
lowQualScore : .. . . . ...... . . . . . . . ......................... . . . . . . .. . ... . .. .. .. .......... .. . . . .. .. . ............ . . .. . . . ...
lowQualScore : 00 0 0 3 000000 7 7 0 0 8 6 7 4444444444444444444444444 0 4 7 1 0 7 22 7 000 8 11 11 11 1111111111 11 4 9 4 11 99 0 222222222222 8 2 88 0 0 3 333
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCACGTNATTTNTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGAA--A-A--GTT-T-------TAC---TTANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TATG--CGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--CC----A-ACTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
Reference ( family-1204 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATGACATNAGNAAGCCTAAACAC----GAACTGTACCGGCACGTNATTTNTTTAGTTTTAAACTTATTTATTTTACATCGATTGTGAA--A-A--GTT-T-------TACGA-TTANACAAATCACGCTCGAAGTCTTTCTGGGTAGAACTAGTAC--TAAGCA-TATG--TGGATAAAGTGTCTT--GCTCA--AGGACACCACACAT--AGCCGTGG--------CGGAGG--AT-CGAACCCAC-GA--CCCTCC-GA-TCCTTGG--NC----A-ACTCTACCACTGGACCA--TGCGATCCA-CA-AC---TCCAA
gi|1 : ATTAT-ATATTACCAAGCCCAAACAC-----AATTATACCAACACTTTATGTCTTT-GTTTTAAACTTATCTATTTTACATCGATTCTAAA--C-A---------------AC---TTAGACAAATTGTGCTTGAGGTCTTTCTAGGTAGAACTTGTAC--TAAGCA-TATGAGGGGATAAAGTGTCTT--GCTCA--AGGACACCACCAAT--AGCCATGG--------CTGAGG--AT-TGAACCCAC-AA--CCCTCT-GA-TCCTTG------------CTCTACCACTGGACCA--TGTGACCCA-CACAT---TCCAA
gi|11 : ctatagaaaataaactaccgtaatcatgaaaaattataatttttttgcaaaattactgtaaatatgtagcagcatcggctccctgagaattattagaatacaacgattattaaaaaagctatggcaaaagtctacaaactttccgatccccctcgtatatggtatcacttaatatgtttttctgttaccggtaAAAATGCCTT--GCTCA--AAAACATCAGAAATAAAACCATGAT-------CAGGGA--AT-CCATCCCAG-AA--CCCTCC-AATTCCTTGT--CCAA--A-ACTCTACCATTcattttatgtaaaacttaccagaaacctgtagattcccagaaatgtttcaattctcctactctct
gi|14 : aATTCTACACTGATTGTGAA--ACA--GGT---------------TCATACAAATTAGACTCGAA-TCCTCCTGa
gi|2 : TATG-CATCAGAAAACCT---CAA----AAACTGTACAGGCATGTGACTCATTCAGTTT-AAATTTATTTGTTTTATTTCTATTATGAA--A-GTTGTT-T-------CA-----TATACAAATCACGCTCGCAGTCTTGCTGAGTAAAACTAAAAC--TAAGCA-TATG--TGGAACAGGTAT-TT--GTTCA--AGGACACCACACAT--AGCCGAGG---------GGAGG--AT-CGAACCTAC-GA--TCCTCC-AA-Ttag
gi|3 : aactgtaaaaaattaaaatacactgtattgtgacgaatgtacactacttgttttcaacaattactacaaatgttagagccagggtaacttccaaccatttataataaatacgattctttacaaaaatagaaatggaatgacattcactgaagtattttcagtctgTGATTTATTTTGTTCTAAACTTATTAATTTTACATAGATTGTGAAATA-A--GTTCT-------TACAACTTAGACAACTCATGCTC-------CTGTAGGTAG-ACTAGTTCTGTAAGCA-TATG--TAAATAACGTGTCTTTAACTTA--AGAACGTCATGCGT--ATATGTAG--------CGGGGGAAAT-TGAACCCAT-GG--CCGTGC-TA-TC
gi|4 : ctcatattgaaccaagcagaatcATTATGACATAAGGAAGCTTAAATATTCTTGAACTGTTTCAGCAAGTTTTTTTTTTAGTTTTAAACTTACTTATTTTACCTCAGTTGTGA------------T-------GATGAATGACACAAATCACACTGAAGGTGTTTCTGGGTAGAACCAGTAA--TAAGCACTATG--CAGAT---GTGTCTA--GCTCA--AGTACACCACACAT--AGCAGTGG--------TGGAGG--AT-CTAACCTAC-GT--TCCTCC-CA-TCCTGGGTTCC----ATGCTCTACCACTGGACCACTTGC--TTCAGCA-ACAAGTCCAtaatgatcttcacatcactgttttgtcaaatactttgctaagttatatttgaaaccaaattagcaggctgtaaagtggacagaagcaatagaaatgtaacaggagggggttacaaatagttacataaaaggttggcatgaacttttccatgcata
gi|5 : cttattaaggtatgtttatTTATTTATTACACATTAATTATGAA--A-A--ATT-TCTTACATTACG---TAGACAAATCATGCATGAAATTTTTCTGGCTTGGACAAGAAT--TAAGCA-TATG--TGGATAAAATGTCTT--GTCCATTAGAACTTCCCACAT--ATCCAAGA--------CAGTGG--AT-CAAACTCAC-AG--CCTTTC-tgatcatgattagtcagccagttgttcaagttcaataaagcaaa
gi|6 : aaattaattcattcttTTGAAACTCATTTGTTTTACATAGATTGTAAA--A--------T-------TA----TTATACAAATTACGCTCAAA-TATTTCTTAGTGGAACTAATAC--TAAACA-TATT--AATACAAAGTGCCCT--GATCA--AGAACACTACACAT--AGCCGTGG--------C-GAGG--AGACTAACCCGC-AA--CCCTTC-GG-TCacttaataataaatacattcactttaagtataaatttgttttaaaggtaacactaaattgaatattgaaagtgaataaagaaatgtgac
gi|7 : aaGGATAAAGTACATT--GTCCA--ATGACACTACACAT--TGCTGCGA--------TAGAGG--AT-GGGACCAAC-GATCCCCTCCTGA-TCCTTGG--CCTGATG-AC-CTACCACAAGAACA--TGC-ATCCA-ggtggtttgatgctttattactacgcctgtttcgttctgtcgtttccgtgatttgttttgacatgatccgttcaaaattataatattgct
gi|8 : GATGAAATGTCTT--ATACA--AGGACACAACATAT--GATCATGGACAAGGCACAGATG--AC-CTTACCCACTGA--TTCTTC--A-TCCCTGG--AC----A--CTCTATTACTCAACCA--TATGATCCA-CA-AC---TTCAAatgttttgattatgatttagtggctcttttctctacgtcttctgttaggtctaatatattttttttatttcttgttttgattact
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TAACTGATAAAATTAAAATAAAACATTGTATTGTTATATATGCGCAATATGTTTTGGACGGAACAACCACTACTGTTAATACTAGGATTTTCAACCATTTACAAGAAAC
Unaligned ( gi|10 ): AATTATAAGGCAATAAGTCGATAGAACCAATAGAAAAACAGTATGGGTACATAGGTAACCTATTCAAAAGTTGCTGTATGAATTGTTCCATGCATA
Unaligned ( gi|12 ): TTAATAGGCTTTAAAGTCGATAGAAGCAACAGAAAAAAAAACAGGAGGGTTACAAATAGGTAACCTACTAAAAAGTTGAAGT
Unaligned ( gi|13 ): TCGATAGAAGCAACTGAAAAGCAGGACAGGTACAAGTAGGTGATATACTTAAAAGTTACAGTATG
Unaligned ( gi|15 ): AAAATGAAAAACAGGAGGGGTACAAGTAGGTAACCTACTTAAAAATTGAAGTA
Unaligned ( gi|16 ): AAAGCAAAAGAAAAACAGGAGGGATACAAATAGGAAACCTACTTAAAAGT