lowQualScore : 1111111 11111 1 11 1 1 111 1
lowQualScore : 5 1 2 2 4 999999999999 7 1 44444 1 1 777777777 2 2 7777 0000000 2 2 11111 5 77777 2 2 2 4 22 2 55 0 333 2 8888888 22 2 22 2 2 22 0 4 44 44 2 2 1 5555 55555 0 2 22 2 333 000 22 0 1 6 5 1 333 1 22 1 1 1 1 1 444
lowQualScore : . . . . . ............ . . ..... . . ......... . . .... ....... . . ..... . ..... . . . . .. . .. . ... . ....... .. . .. . . .. . . .. .. . . . .... ..... . . .. . ... ... .. . . . . . ... . .. . . . . . ...
lowQualScore : 3 8 1 1 2 111111111111 8 6 88888 9 9 666666666 1 0 6666 2222222 1 1 44444 2 55555 1 1 2 4 99 0 55 5 555 0 5555555 88 1 99 5 1 99 2 1 66 00 2 1 8 0000 99999 1 4 99 7 777 999 88 8 9 8 4 8 222 7 44 7 7 7 7 8 999
consensus : GGTCTCACTNAACAATTACCTC-C-C-TTACAT--------GACGGTAGCAAGATTATTGC-----GCCCA-AGAAATTAGAGC-TG---------TGTAAAGCGGTTG-GG---CA--A--T-T-TTTT-TT-TN-AAAAATGC----ATAAA-A-T-G-T--CATATTTC-TTT--GTGC---ATA-TGGGAAC-------ATT--GGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA-TGAAGCT----ATAACAGTTTAAAGATGCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGTCATCAAACCA--TCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TAT--CCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
Reference ( gi|4 ) : GGTCTCACTGAACAATTACCTC-C-C-TTGCAT--------GACGGTAGCGAGATTATTAC-----GCCCA-AGAAATTAGAGC-TG---------TGTAAAGCGGTTG-GG---TA--A--T-T-TTTT-TT-TA-AAAAATGC----ATAAA-A-T-G-T--CATATTTC-TTT--GTGC---ATA-TGGGAAC-------ATT--GGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACCCTGGG-AACTGTTTGA-TGATGCT----ATAACAGTTTAAAGATGCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCA--TCCAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTTTAGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TAT--CCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGACG
gi|5 : GGTCTCACTGAACAATTACCTC-C-C-TTACAT--------GACGGTAGCAAGATTATTAC-----GTCAA-AGAAATAAGAGC-TG---------TGTAAAGCGGTTG-GG---TA--A--TAT-TTTT-TT-TA-AAAAATGC----ATAAA-A-T-G-TGTCATATTTC-TTT--GTGC---ATT-TGGGAAC-------ATT--GGAACATT-TTC--ATGATTTC-TG--AAAAGTTTGGGTGACCCTGGG-AACTGTTTGA-TGATGCT----ATAACAGTTTAAATATGCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCA--TCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTCT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TAT--CCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGA
gi|8 : GGTCTCTATGAAGAATTACCTC-C-C-TTACAT--------GACGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TG---------TGTAAAGCGGTTG-GG---CA--T--T-T-TTTT-TTGTT-AAAAATGC----ATAAA-A-T-G-T--CATATTCC-TTT--ATGC---ATA-TTGGAAC-------ATT--GGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACATTGGG-AACTGTTTGA-TGATGCT----ATAACAGTTTAAAGATGCGTAGTGATACACTGCA-----ATAAATGGGCAGAATTGTCAAAAACGACGGGGTGTCATAAAACCA--TCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA------ATTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TAT--CCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGAAGAACAG-TACAAAATTAATTG--GTATGTGAGAC
gi|15 : GGTCTCACTGAACAATTACCTC-C-C-TTACAT--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TG---------TGTAAAGCGGTTG-GG---CA--G--T-T-TTTT-TG-TT-AAAAATAC----CTCAA-A-T-G-T--CATATTGG-TTT--GTGC---ATA-TGGGAAC-------ATT--GGAGCATT-TTC--ATGATTTC-TG--CAAAGTCTGGGTGACACTGGG-AACTGTTTGT-TGATGGT----ATAACAGTTTAAAGATGCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCA--TCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAAAACCAT-C---CATAATG-TAT--CCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGCAGAAC
gi|11 : GGTTTCACTGAAGAATTGTCTC-C-C-TTACAT--------GACAGTAGCAAGATTCTTAT-----GCCAA-AGAAATTAGAAAATG---------TGTAAAGCGGTTG-GG---CA--T--T-T-TTTT-GT-TA-AAAA-TGC----ATAAA-T-T-G-T--CATATTTC-TTT--GTGC---ATA-TGG-AAC-------ATT--GGAACATT-TTC--ATGATTT-------------TGGGTGACATTGGG-AATTGTTTGA-TGATGCT----ATAACAGTTTAAAGATGCGTAGTGATACACTGCA-----ACAAATGGGCAGAACTGTCAAAAATGAA----TGCCATCAAACCA--TCGAAATTGTGAAAT-G---CAACCTGGTCAACCCAATG--TTTTTT--TCTGCATAATTAGACCAACAGAGGATTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---AGTAATG-TAT--CCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--TTGTGTGAGAC
gi|10 : GGTCTCACTAAAAAATTACCTC-C-C-TTACAT--------GACGGTAGCAAGATTCTTAC-----GCTCA-AGGAATAAGAGC-TG---------TTTAAAGTGGTTG-CG---CA--A--CAT-TTTT-GT-TA-AAAAATGC----ATAAA-A-T-T-T--CATATGTC-TTT--GTGT---GTA-TGGAAAC-------ACT--GGAACATT-TGT--ATGATTTA-TG--CCAAGTTTGGATGACATTTGG-AACTGTTTGA-TGAAGCT----ATAACAGTTTAAAGATGCATAGTGATACACTGCA-----ACAAATGAGCGCAGTTGTCATTAATGAAAGGGTGCCATCAAACCA--TCGAAA-TGTGAAAAAG---CAACCGGGTCTTCCCAATGTTTTTTTT--TCTGTATAATTGGACCAACAGAGGACTAT-CTATTGGAACATGGCACTTTTAGAACCGC-T---TGTAA------------TG-TTCCAGAAGTG-CATTT-A-TCTATATTTAGAACAG-TACAAAATTCATTG--TTGTGTGAGAC
gi|12 : GGTCTTACTTAAGAGTTACCTC-T-C-CTACAT--------GAAGGTAGCAAGATTATTA------GCCCG-ATAAACTAGAGC-TA---------TGAAAATTGGTTT-GG---TAT-A--T-T-TTTT-T-------AAATGC----TTTAA-A-T-ACT--TATGCAT--TTT--CTAC---ATA-TGATAAG-------GAT--GGAACGTT-GCT--ATGGGTTG-TG--CCAAGTTTGGCTGACACTGGG-TGCTGTTTGA-TGAAGAT----ATAACAGTTTGAAGATGCTTAGTGATACACTGCA-----AGAATTGAACAGAATTGTCAAAAATGAA-AGGTGTCCTCAAACCA--TGTATATTGTTAAAAAG---CAACCATATTAA--------------T--TATGTATATTTGGAGCAACAGATGGCGAT-CTATGGATACAAGATGATTTTAGAATCAT-C---AGTAATG-TGG--TCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATTTAGAACAG-TACAAAATTAATTG--TTGTTTAAGA
gi|16 : GTCTCACTGAACAATTACCTC-C-C-TTACAT--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TG---------TGTAAAGCGGTTG-GA---CA--G--T-T-TTTT-TG-TT-AAAAATGC----CTAAA-A-T-G-T--CATATTTC-TTT--GTGC---ATA-TGGGAAC-------ATT--GGAGCATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACACTGGG-AACTGTTTGA-TGATGGT----ATAACAGTTTAAAGATGCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCA--TCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-C---GGTAATG-TAT--CCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGCAGAACA
gi|6 : GTCTCACTTAAGAGTTACCTC-T-G-TTACAT--------GACGGTAGCAGGATTCTTAT-----GCCCA-AGAAATTACAGC-TG---------TGTAAAGCGGTTG-GG---CA--A--T-T-TGTT-TG-TT-AAAAATGC----ATAAA-A-T-G-T--CATATTCA-TTT--GTAC---ACA-TGGCAAC-------ATT--GGAACATT-TTA--GAAATTTT-TG--TCAAGTTTGGATAACATTGGG-AACTGTTTGA-TGAAGCT----ATAACAGTTTAAAGATGCATAGTGATAAACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGTGGTTGCATCACACCA--TGGAAATTGTGAAAAAG---CATCCTGGTCAACCTCATG--TATTTT--TCTGGATAGTTGGACTAACAGAGGACTAC-CTATGGTAATAAGGCACTTATCGAACCAT-T---GGTAATG-TAT--CCAGTA-TTCCAGAAGTA-CATGT-C-TCTATATGTAGAACAG-TACAATATTAATTG--TTGCGTGAGA
gi|27 : GTCTCACTTAAGAATTACCCC-T-C-TTACATTATAACATGACGGTAGCAAGGTTTTTAC-----GCCAA-AGAAGCTAGAGC-TG---------TGTAAAGCAGTTT-TG---CA--A--T-T-TTTT-TT-TGTTAAAATAC----ATAAA-A-T-G-T--CA-------TTT--GTGC---ATA-TG-----------------GGAACATT-TTT--ATTATTTC-TG--CTAAGTTTGGATGACATTGGG-AACTGTTTG
gi|34 : GTCTCACTTACCAATTACCTT-G-CATTG-GT--------GACGGTAGCAAGAGTATTGC-----GCCCA-AGAAATTAGAGC-TG---------TGTAATTCGGTTG-GGCCTTA--G--T-T-TTGG-T-----GAAAAGGC----TTAAA-A-g
gi|7 : TCTCACTTAAGAATTACATC-C-C-TTATAA--------GATGGCAGCAAGATTCTTGT-----GACCA-AGAAATTAGAGC-AG---------CGTAAATCTGTTG-GG---CA--T--T-A-TTTT-TT-TG-AAAG-TGC----ATAAA-AGT-G-T--CATATTTC-TTT--GTAT---ATA-TATGAAC-------ACT--GGAACATT-TTC--ATGATTTC-TGTGCCAGGTTAAGATGACATTGAG-AACTGTTTTA-TGAAGCT----ATAACAGTTTTAAAATGTGTAGCGATACACTGCA-----ACAAATCGGCAGAATTGCCAAAAGTTTAGGGGTGTCATCAAACTA--TCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA----TTTTTT--TCTAAATATTTGGAGTGACAGATGACTAT-TTATGGAAACAAGACATTTTTAGAACCAT-T---GGTAATG-TGT--TAAGTG-TTCCAGAAGTG-CATTT-C-TCTATATATAGAAAAG-TGTAAAATTAATTG--TTTCGTGAGA
gi|2 : TCTCACTTACCACATACCTCAC-C-TTG-GT--------GACTGTAGCGAAATTATTGC-----GTCCT-TGAAATTAGAGC-TG---------TGTAAATCGGTTA-GG---CA--T--G-T-TTTT-GT-TG-AAAA-TGC----TTGAA-A-TTA-T--CATATTAT-TTT--GTACTTAATAATGTGAAC-------ACT--GGCATATT-TTA--ATGAGTTC-TG--TCAAATTTGA-TGACATCGGG-TACTGTTTGA-TGAAGCTGTATATAGCGGTTTAAAGATGCGTAGTGATACACTGCA-----ACAAATGGGCAAAATTGTCAAAAATAAAGGGGTGTCATCAAACCA--TCGAACTTGTGAAAAA----TAACCTGGTCAACCTCATA---TTTTT--TCTGCTAACTTGGGCTCACAGAGGACTGT-TTATTGATATAAGATACTTTTAGA
gi|30 : TCTCACTGAAAAATTACCTC-C-C-TTACAT--------GATGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TG---------TGTAAAGCGGTTG-GG---CA--A--T-T-TTTT-TG-TT-AAAAATGC----ATAAA-A-T-G-T--CATATTTC-TTT--GTGC---ATA-TGGGAAC-------ATT--GGAAttgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcccattggcaatgtgttcagttttccagaagtgcatgtctctatatatagaacagtacaaaattaattggtgtgtgagac
gi|25 : TCTCACTCACCGATTGCCTC-CTC-TTA-GT--------GATGGAAGC---ATTTTTGC-----ACCCA-TGAAATTAAAGC-TG---------TGTCAATC---------------A--T-T-TCTG-TT----GAAAATGC-----TGAATT-T-G-T--CGTATTTC-TGT--GTAT---ATA-TGAAAGC-------ACT--GGAACGTT-TTC--ATTAGTTC-TG--CCAAATTTGGATGACATTGGT--ACTATTT
gi|42 : TCTCACTTACCAATTACCTC-C-C-CTTTGT--------GACAGTAGCAAGTGTATTGT-----GCCCA-AGAAATAAAAGC-TG---------TATAAtttcatcaaattggtttaataagcattgaactgtattaaatg
gi|9 : CTCACTTACCAATTGCCTC-C-C-CTTATT--------GACGAAAGCAAGATTATTAC-----GTCCA-AGAAATTAGAGT-TG---------TGTTAATCGACTT-GG---CA---------TTAT-TC-TA-AAAA-TGC----GTAAA-A-T-GGT--CATATCTA-TTTCTGTAC---ATA-TGGGAAC-------ATT--GGAACATCCTTCTAATGAGTTC-TG--TCAAGTTTGTATGACATTGGG-TACTGTTAGA-TAAAGAT----ATAATAGTTTAAAGATACGTTGTGATACACTGTA-----ATAAATGAGCA---------AAAATGAATGGGTATAATCAAAACA--TCAAAATTGTGAAAAAAAAACAATCTGGTTAACCCCATG--TGGTGT--ACTGCATATTTAGACTTGCAGGGGACAAC-ATATGGAAACAGGACACTTTTACAACCATAT---GA-AATG-TGT--TCAATG-TTCCAGAAGTG-CATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--ATGTATGAGAC
gi|14 : gaTCACTTAAGAATTACCTC-C-C-TTACAT--------GACGGTGGCAAGATTCTTAC-----GTCCG-AGAAATTAAAGC-TG---------TTTAAAGCGGTTG-GG---CA--AAAT-TGTTTTGTT-TA-AAC--TGC----ATAAA-A-T-G-T--CATATTTC-GTT--GTGT---ATA-TGGGAAC-------GTT--GGAACATT-TTC--ATGATTTC-TG--CTAAGTCTGGACAA---TGAG-AACTGTTTGA-TGA-------------------AA----CGTAGTGATACACTGCA-----ACAAATGAGCAGAATTGTCAAAAATGAAGGGGTGTCATCAAACCA--TCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG----TTAT--TCTGCATAATTTGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGT-ATG-TAT--CCAGTG-TTCCAGAAGTG-CATTT-C-TCTATATGTAGAACAG-AACAAAATTAATTG--TTGTTCGAGAC
gi|13 : aTCACTTACCAATTATCTC-C-T-CT-----------------TAG------TATTGT-----GCACA-GGAAATTAGAGC-TG---------TGTAAATCGGTTG-GG---CATTA--T-T-CTTG-TT-GA-AAATATG---------------G-T--CACATTTC-TTT--GTAC---ATA-TGAGAAC-------ATT--GCAACATT-TTC--ACAAGTCC-TG--CCAAGTTTGGATGACCTTGGA-TACTGTTGGA-TGAAGCT----ATAACAGTTTAAAGATGTGTAGTGATACACTGCA-----ACAAATGGGCATAAATGTCAAATATGAAGGGG-GTCATCAAACAA--TCGAAATTGTGAAAAAT---CAGTCTGGTCGAACCCATT--ATATTT--CCTGCATATTCGGACTACCAGAAGACTAT-ATATAGAAACAAGACACTTTTAGAACCAT-T---GGTAATG-TAT--CCAGTA-TTCCAGAAGTA-CATGT-C-TCTATATGTAGAACAG-TACAAAATGAACTG--GTGTTTGAGAC
gi|24 : aCTGAACAATTACCTC-C-CTTTGC-T--------AATGGTAGGAAAATTCTTGCTACATGTATATAGAAAATAGAAC-TGCATTAAATTTGTAAAA-GG--A-GA---TA--G--C-T-TATA-TT-------GATG-----GTACC-A-T-A-T--TA-ATTCCATTTCAGT-C---TTC-TGGTGTCA------ATTAAGGGACCTG-TTG--ATAAATTC-TG--CCAAATTTGGATGACGGTGGATGACTTTTAGA-TG
gi|18 : GGTAGCCAGAATGTTGC-----GCCCA-GGAAATTGAATC-TG---------AGTAAATTGGTTGTGG---AA--A--C-T-ATAT-CT-TA-AAAG-TGCTTTAATAA--------T--CATATTAT-ATT--CTAC---AGA-TGAGAACTGAGAATATT--G-AACATG-GTC--ATAAG--CGTG--TCAAGGTTAGATGACACGGGG-TCCTGTTTGA-TGAAGAT----ATAACAGTTTGATGATGCGTAGTGATATACTCCA-----A-AAATGACAAGAATTGTCAAAA---AACGCATA-CATCAAACAG--TATAAATTGTGAAACAG---TAtgaagtagataaacttcaaacatgta
gi|28 : atactaaagttctcactttgtTTGT-----GCCCA-ATAAATTAGAGA-TG---------TGTAAATCTGTTG-ttctatataatgctattatatatat
gi|17 : g--CATATTTC-TTT--GAAC---ATA-AGAAAAT-------ATT--GGAACATT--------GG------G--CCAAAATTGGATGACACAAAG-A----TATAA-AAA--------ATAA-AGTTCA------CGGCGTGATACACTGCACAAAAAAAAATAGGCAGAGTTGTAAAAAATGAAGGGGTGTCGTCAAATCA--TTGACATTGTGAAATAG---CAATCCGTTCAAAACCATG--TTATTCCATC-ATATATTT--ACTAACAGAGGACAAT-C--TATGGACCCGACACTTTTAGAACCAT-T---GGCAAAA-TGT--TCAGTG-TTCCAAAGGTG-CATGT-C-TC--TATGTATCACGG-TACAAAAACAATTG--GTGCGTGAGATGtgcattattccgtgtgttttttcctgcatatattgacaaacagaggacatgctattgaaacaaatcatttttacaaccatttgcaatgtgttcagtgttccagaagtgcatatgtagaacagtacaaaattatttggtgttt
gi|41 : TTC-TTT--GTAC---ATA-TGAGAAC-------ATC--AGAACATT-TTC--ATGATTTC-TA--CCAAGTTTGGATGACATTGGA-TACTGTTTG
gi|21 : GTTTGGATGACATTGGG-AACTGTTTGA-TGAAGCT----ATAACAGTTTAAATATGCGCAGTGATACACTGTA-----ACAAATGGGCAGAATTGTCAAAAATGAAAGGGTGCCATTAAACCA--TCGAAATTGTGAAAAAC---CAACCTGGTCAACCCAATG--TTTTTT--TATTCACAATTGGACCAGGAGAGTGCATT-CTATGGGAACAAGGCACTTTTAGAACCAT-C---GGTAATG-TAT--TCAGTG-TTCCAGAAGTG-CATGT-C-TCTATATGTAGAACAG-TACAACATTAATTG--TTGTGTGA
gi|23 : TTGAATGAAGAT----AAAACAGTTTAGCGAAGCATAGTGATAAGCGGCA-----ACAAATGGGCAGAATGGTCAAAAATGAAGGGGTGTCATTAAACCA--TCGAAATTGTAAAAAAT---CCACCTGGTCAATCACATG--TTTTTT---CTGCTTTATTAGACTAAGAGATGACTCT-CTATGGAAACAAGACAAGCATAGAACCAT-T---GGCAATG-TCT--TCAGTG-TTCCAGAAAGG-CATGT-C-TCTATATGTAGAACAG-TACAAAATTGATTG--GTGTGTGAGA
gi|35 : aataGGAGTGTCATCAG--CAATTTCAAATTGC-AAACCG---CAGTCTGGTAGATACCA-G--GCTTTC--TCTGTGTATTCGGATCGACTGATGACTAT-TTGCAG--ATAA
gi|19 : TGCCATCAAACCA--TTGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTA--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATACGGCACTTTTAGAACCAT-T---GGTAATG-TAT--CCAGTG-GTCCAGAAGTG-CATGT-C-TCTATATGTAGAACAG-TACAAAATAAATGG--GTGAATAAGGCGaaatcatt
gi|28 : TG--TTTTTT--CCTGCATATATTGACAAACAGAGGAC-ATGCTATTGAAACAAATCATTTTTACAACCAT-T---TGCAATG-TGT--TCAGTG-TTCCAGAAGTG-C----------ATATGTAGAACAG-TACAAAATTATTTG--GTGTtataggcatgctatattgaaaaaatttgtatttagccattctaaaatttgacaaatcctgatatatttcctttatatatgagatatactgtgtaaatcagtcgtgctattca
gi|31 : gttgtgcccaataaattagagatgtgtaaatctgttgtgcattattccgtgG--TTTTTT--CCCGCATAATTAACCCAACAGAGGACAAT-CTAAGGGAACAATGCACCTTTAGAACCAT-T---GATAATG-TAT--CCAGTG-ATCAAGGAGCG-CATGT-C-TTTATATACAGAACAG-TACAAAATTAATTGTTTTGTGCGAGAtt
gi|38 : CTGT-CTATGGAAACAAGACACTATTAGAACCAT-T---G-------------------TTCCAGAAGTG--ATTTACGTCTATATGAAGAATAG-TACAAAATTAATTG--GAGTGTGA
gi|13 : GTACTTCTGGAAT-AC-T---GG--ATA-CATTACCAATGGTTCTAAAAGTGTCTTGT-T-TCTATATATAGca
gi|40 : atcacttaccaattatctcctcttagtattgtgcacaggaaattagagctgtgtaaatcggttgggcattattcttgttgaaaatatggtcacatttctttgtacatatgagaacattgcaacattttcacaagtcctgccaagtttggatgaccttggatactgttggatgaagctataacagtttaaagatgtgtagtgatacactgcaacaaatgggcataaatgtcaaatatgaagggggtcatcaaacaatcgaaattgtgaaaaatcagtctggtcgaacccattatatttcctgcatattcggactaccagaagaTTTTAGAAC-AT-TAATGGTATTGATTT--TCAGTG-ATCTAGAATTG-AATTT-C-TTTATAATCAGAACAG-TTCAAAatgtctctatatgtagaacagtacaaaatgaactggtgtttgagac
gi|2 : taaCCAT-T---GGCAATG-TGT--TCAGTT-TTCCAGAAGTG-CATGT-C-TCTATATATAGAACAG-TACAAAATTAATTG--GTGTGTGAGACttgttat
gi|43 : tctcacttaccacatacctcaccttggtgactgtagcgaaattattgcgtccttgaaattagagctgtgtaaatcggttaggcatgtttttgttgaaaatgcttgaaattatcatattattttgtacttaataatgtgaacactggcatattttaatgagttctgtcaaatttgatgacatcgggtactgtttgatgaagctgtatatagcggtttaaagatgcgtagtgatacactgcaacaaatgggcaaaattgtcaaaaataaaggggtgtcatcaaaccatcgaacttgtgaaaaataacctggtcaacctcatattttttctgctaacttgggctcacagaggactgtttattgatataagatacttttagattgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcAATG-TGT--TCAATG-TTCCGGAAGTG-CATGT-C-TTTGTATGTATAACAG-TACAAAATAAGTTA--GTGTGTGAGACG
gi|44 : TG-ATCCAAAAGTG-CATTT-C-TCTACATGCAGAACTGTTACAGAAATAAGTT--ATGTG
gi|45 : ATGTAGAACAG-TAAAAAATTAATTT--TTGTGTGAGGCG
13 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|1 ): TATAAATCAGACCCATGGGCCTTAACGGACACCTGATTATCCAAAAAAACAGTCACATAAGTCTATTCAGTCATAAGAAATAATTTTTTTGTCAATTTCTCTTAAGAGATTCAGTAAAGTAGGCCCCACCCCCAGGACCAAACCGTGAGACCCCAGGGACATGCAATTCACAATTTTTATAAAAGACCGATATACGTCCATAATCATGCTCACCATTTGTTTCCCAGTGCTTCCTATATTGAGAAGACGATTTTTCAAATTTTTTGGGGGGGGGACGGATGGGGACCATGCAATGCACAATTTTGATTCACCCTTATGTACCAAAGCGGCATTTCATTACGACTGAGTTTAGTTTTTGAGAAGGAGTCGAAAATGTCAATTGTTTACGGACGCACGACGACTGACAAATGCGATCGCAAAAGGTCATTTGAGACAAAGTCTCTGGTTACCTAAAATCTAATCTAATATTCTAAGTAAAACAAATACAATACATTTTCAAGCAAATACCAAAAATATTTCATCAAATTCGAGCTTTATAAACCCTTTAGTAAAATTTTTATAAATATTGATTGATTGAATATCTAGCGTCATTTTTATGCCATCGAGGGCTAACAGACGATCAGTTAACCTAACCACTGTTTCCTGGAATTTACCAGTACTCGAGCACACCCCATCTCTGCAAGTAACTGATAACTTTCCCACTTGAATCAGCGGTGAGAGACGAATGATAATGAGACACAATGTCGTATATCAATCAAGCCGGGCAGGGATTTGAACTCAGGACCCCTGGACTGACAGTCAGACGCGTAACCAACTGAGCTATTTGGGCCTGGCTTCTATGAATTAAAGGGGCATCAGCCTAAAACTGACTTATTCCACTTGTACATATTAAAATAGACTTATTCCCCTT
Unaligned ( gi|3 ): GTTCATCAGTACTAGAGCACATGTATCGCTTTACCACTTAAATCAGCAATGAGAGACAAATAACAATGACAAGCAATCATCATGTAGGCTGGACAAACGGGGATTCATAATCATGACCCTTAGCTTGATAGTCAGACCGAGCCAACCAAACTCTAATGGTGTAGCTGTTTCTCATTAGAAGTGTCTGATTTCTCTACATGTACCAGATACTAAAATATGAGTAGCTCACCTTCTTTCAACATCCTAGATTCTGGGTTGTGTAGCTTCATTTTTCTTGTCCATCTCATGTCCATCCCTAAATATATGATATAAACATTACAGTGTAAAAATAACAATTAACATATTTGTACTGACTACCATGGAGATGCATTACACAGAATAACAACATTTAACATGTTGCATTATAATCGAGGTAAAACTCCTGTTGGTTTGATTTATTTTGGATAATTTGGGTCATTTTTTGCCATCAAGTTCTTACCTAACCTCTCTTTTCTGGATACTTAAAGGTTAACAAGTATTTGAGCACACCTGTCACTTTCCCACATGAATCAGCAATGGGAGATGAATAACGACACGTAATGTTGAATATCAATCATCAAGGAGATTGGACTTACATCCTTGGATTGACAGTTGGACTGAGCCAAACAAACTCTAATGATGTAGCTCATTAGAAGTGTTCCTGGCCCAA
Unaligned ( gi|20 ): TATGGAGACGACCTAAATGGGTCCATAATCATGCTCACCATTTGTTTTACCACTGCTTCCTTTACCTTGGATTTGAGTGTTTTGGTCCTGCTCCTAAGGGGGGTGGGGACAATGTAATTCACAATTTTGATTCGACCGTAGGTACAAAAGCTGCATCCAAAATTAAATGACGATTGAGCTAACAGTTTTTGAGAAAAAGTAACAATGTGAATTGTTAATGGACACACGACGTCAGACAAAATACAATCACAAAAGGTCACTTTTAGACAAAGTCTCAGGTGACCAAATTAATC
Unaligned ( gi|22 ): AATACAGACAGATGATCAGTTAATCTTAATCTTATCTTGACAAACGGAGATTCATAATCATGACCCTTGGATTAGTCAGACCAAGACACCAAACTGATTTCTCTGCATGTTTTACCAGATACTATAATACTAGTAGCTCACCTTCCTTGATTCCTGTTTGTGTCGCTTCATTTCTCATGTTCAACATGTCCGTCCCTAAATATATGATATAAAAATTATATTGTAGGAATAACATTCAACATATTTGTACAAACTTGTTTACGCATTATACAGAATAGCAAC
Unaligned ( gi|26 ): CAAGCCAACCAAATTCTAATGGTGTAGCCAATTTCTCATTAGAAGTATTCCAGGTCTTATTTCTCTGCAAGTTGTACCAGATACTGAAATATGAGTAGCTCACCTGACCTAACTTGATTCGGGGTGACATCATTTGTCATGTCATCTCATGTCCATCCCTAAATATGATGTAAACGTTATATTGTAGAAATAGCAACATTCAACATATCT
Unaligned ( gi|29 ): CTAGATGTCCATAACCTACCCCTAGTGACCGTATGATTATTCATGCACAAGGGAGACGACTAAAGCTATGTTAAACGGTCTGTCATTTTTTCAAAGCTAAAATTCTTCATTTTTTTATATCTGTTTGGAGATGACTGGAATCTGCTAAAGACTTTTACTAAATTTGGGATGTCAT
Unaligned ( gi|32 ): GAGCCATCCAAAGGTGCAGCCCAATTTTCATTAGATGTGCTCCAGGTCTTATTTCTCTGTATTTTGTACCAGATACTAAAATACAATATAGCTCACCTTACCTTCCTTGGTTCGGGGTGTGACTTCATTTGTCATGT
Unaligned ( gi|33 ): CATGGTATTAGATATTTTTATGAAACATTGATCCAATGTCTGTCAAATGAGTTTGTTTTGAATAGATCGGGTCATATTTATGCCATCTGGGGTTAGCAGACGATCAGTTACTCTGCCCAC
Unaligned ( gi|36 ): TTTATTATCGTCATTGAATGCCTAAGAGACGATCAGTTAATATATCAGTATATATAGTTTATCAGTACTTAGGCACGCCAATCTAATCTAGTAACCGATAA
Unaligned ( gi|37 ): CCAATCTTCACAGAAAATGAGTAAAGCAGGGTTTCAAACTAACGACTCCTTAATTCAAACGCATTGCAGAATAAGCTTGCCGCGCCCTTCTGCAAAGT
Unaligned ( gi|39 ): TTACAAGGCATTTTCAGTTTGAATGTAATGTATTTTCATTTTCAAACCTTACTGATGCGAATCTTTAATATTATTTCTGACTTTTA
Unaligned ( gi|46 ): ACAGTCAGACGCACTACCAACTGAGCTATCTGGGTATGGCTTATTTAAGTTAG
Unaligned ( gi|47 ): AAATATTGATCGATTAAATATTTAGCGTCATTTTCATGC
Alignments
lowQualScore : 1111 111
lowQualScore : 1 1 1 1 1 5 33 66666666 0 1 44444 1 44444 1 1 1 3333 4 2 22 77 55 77777 2 555 22 2 22 333 1 333 0 6666666 1 22 2 1 22 1 44 55 22 4444 2 55555 0 22 333 222 22 0 1 1 333 1 1 1 1 333
lowQualScore : . . . . . . .. ........ . . ..... . ..... . . . .... . . .. .. .. ..... . ... .. . .. ... . ... . ....... . .. . . .. . .. .. .. .... . ..... . .. ... ... .. . . . ... . . . . ...
lowQualScore : 0 2 9 9 9 7 44 99999999 6 7 33333 7 33333 7 5 9 2222 0 0 88 55 66 22222 0 444 88 0 66 333 9 333 1 2222222 9 66 1 9 66 8 55 00 22 5555 1 66666 7 88 555 333 66 3 8 8 222 7 7 7 7 555
consensus : GGTCTCACTNAACAATTACCT-C-C-C-TTACGT--------GACGGTAGCAAGATTATT-AC-----GCCCA-AGAAA-----TTAGAGC-TGTGTAAAGCGGTTG-GGCA-A--T-T-T--TTTTG-T-TAAAAATGC----ATAAAA-T-G-T--CAT-ATTTCTTT--GTGC---ATA-T---GGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTT-GGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCA--AACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
Reference ( family-862 ) : GGTCTCACTNAACAATTACCT-C-C-C-TTACAT--------GACGGTAGCAAGATTATT-GC-----GCCCA-AGAAA-----TTAGAGC-TGTGTAAAGCGGTTG-GGCA-A--T-T-T--TTTTT-T-NAAAAATGC----ATAAAA-T-G-T--CAT-ATTTCTTT--GTGC---ATA-T---GGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTT-GGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGTCATCA--AACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
gi|10 : GGTCTCACTAAAAAATTACCT-C-C-C-TTACAT--------GACGGTAGCAAGATTCTT-AC-----GCTCA-AGGAA-----TAAGAGC-TGTTTAAAGTGGTTG-CGCA-A--CAT-T--TTTGT-T-AAAAAATGC----ATAAAA-T-T-T--CAT-ATGTCTTT--GTGT---GTA-T---GGAAAC-------ACTGGAACATT-TGT--ATGATTTA-TG--CCAAGTTT-GGATGACATTTGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAATGAGCGCAGTTGTCATTAATGAAAGGGTGCCATCA--AACCATCGAAA-TGTGAAAAAG---CAACCGGGTCTTCCCAATGTTTTTTTT--TCTGTATAATTGGACCAACAGAGGACTAT-CTATTGGAACATGGCACTTTTAGAACCGC-T---TGTAA----------TGTTCCAGAAGTGCATTT-A-TCTATATTTAGAACAG-TACAAAATTCATTG--TTGTGTGAGAC
gi|11 : GGTTTCACTGAAGAATTGTCT-C-C-C-TTACAT--------GACAGTAGCAAGATTCTT-AT-----GCCAA-AGAAA-----TTAGAAAATGTGTAAAGCGGTTG-GGCA----T-T-T--TTTTG-T-TAAAAATGC----ATAAAT-T-G-T--CAT-ATTTCTTT--GTGC---ATA-T---GG-AAC-------ATTGGAACATT-TTC--ATGATTT-------------T-GGGTGACATTGGG-AATTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAACTGTCAAAAATGAA----TGCCATCA--AACCATCGAAATTGTGAAAT-G---CAACCTGGTCAACCCAATG--TTTTTT--TCTGCATAATTAGACCAACAGAGGATTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---AGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--TTGTGTGAGAC
gi|12 : GGTCTTACTTAAGAGTTACCT-C-T-C-CTACAT--------GAAGGTAGCAAGATTATT-A------GCCCG-ATAAA-----CTAGAGC-TATGAAAATTGGTTT-GGTATA--T-T-T--TTTT-------AAATGC----TTTAAA-T-ACT--TAT-GCAT-TTT--CTAC---ATA-T---GATAAG-------GATGGAACGTT-GCT--ATGGGTTG-TG--CCAAGTTT-GGCTGACACTGGG-TGCTGTTTGA--TGAAGA-T----ATAACAGTTTGAAGAT-GCTTAGTGATACACTGCA-----AGAATTGAACAGAATTGTCAAAAATGAA-AGGTGTCCTCA--AACCATGTATATTGTTAAAAAG---CAACCATATTAA--------------T--TATGTATATTTGGAGCAACAGATGGCGAT-CTATGGATACAAGATGATTTTAGAATCAT-C---AGTAATG-TGGTCAGTGTTCCAGAAGTGCATGT-C-TCTATATTTAGAACAG-TACAAAATTAATTG--TTGTTTAAGA
gi|13 : TCACTTACCAATTATCT-C-C-T-CT-----------------TAG------TATT-GT-----GCACA-GGAAA-----TTAGAGC-TGTGTAAATCGGTTG-GGCA-T--T-A-T--TCTTG-T-TGAAAAT------ATG------G-T--CAC-ATTTCTTT--GTAC---ATA-T---GAGAAC-------ATTGCAACATT-TTC--ACAAGTCC-TG--CCAAGTTT-GGATGACCTTGGA-TACTGTTGGA--TGAAGC-T----ATAACAGTTTAAAGAT-GTGTAGTGATACACTGCA-----ACAAATGGGCATAAATGTCAAATATGAAGGGG-GTCATCA--AACAATCGAAATTGTGAAAAAT---CAGTCTGGTCGAACCCATT--ATATTT--CCTGCATATTCGGACTACCAGAAGACTAT-ATATAGAAACAAGACACTTTTAGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAAAATGAACTG--GTGTTTGAGAC
gi|14 : aTCACTTAAGAATTACCT-C-C-C-TTACAT--------GACGGTGGCAAGATTCTT-AC-----GTCCG-AGAAA-----TTAAAGC-TGTTTAAAGCGGTTG-GGCA-AAAT-T-G--TTTTG-T-TTAAACTGC----ATAAAA-T-G-T--CAT-ATTTCGTT--GTGT---ATA-T---GGGAAC-------GTTGGAACATT-TTC--ATGATTTC-TG--CTAAGTCT-GGA---CAATGAG-AACTGTTTGA--TGAAAC-------------------------GTAGTGATACACTGCA-----ACAAATGAGCAGAATTGTCAAAAATGAAGGGGTGTCATCA--AACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG----TTAT--TCTGCATAATTTGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGT-ATG-TATCCAGTGTTCCAGAAGTGCATTT-C-TCTATATGTAGAACAG-AACAAAATTAATTG--TTGTTCGAGAC
gi|15 : aGGTCTCACTGAACAATTACCT-C-C-C-TTACAT--------GACGGTAGCAAGATTATT-AT-----GCCCA-AGAAA-----TTAGAGC-TGTGTAAAGCGGTTG-GGCA-G--T-T-T--TTTTG-T-TAAAAATAC----CTCAAA-T-G-T--CAT-ATTGGTTT--GTGC---ATA-T---GGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTCT-GGGTGACACTGGG-AACTGTTTGT--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCA--AACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAAAACCAT-C---CATAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAAC
gi|16 : GTCTCACTGAACAATTACCT-C-C-C-TTACAT--------GACGGTAGCAAGATTATT-AT-----GCCCA-AGAAA-----TTAGAGC-TGTGTAAAGCGGTTG-GACA-G--T-T-T--TTTTG-T-TAAAAATGC----CTAAAA-T-G-T--CAT-ATTTCTTT--GTGC---ATA-T---GGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTTT-GGGTGACACTGGG-AACTGTTTGA--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCA--AACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-C---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAACA
gi|17 : --CAT-ATTTCTTT--GAAC---ATA-A---GAAAAT-------ATTGGAACATT--------GG------G--CCAAAATT-GGATGACAC------------------AAAGA-T----ATAAAAAAT-AAAGTTCACGGCGTGATACACTGCACAAAAAAAAATAGGCAGAGTTGTAAAAAATGAAGGGGTGTCGTCA--AATCATTGACATTGTGAAATAG---CAATCCGTTCAAAACCATG--TTATTCCATC-ATATATTT--ACTAACAGAGGACAAT-CTATGG--ACCCGACACTTTTAGAACCAT-T---GGCAAAA-TGTTCAGTGTTCCAAAGGTGCATGT-C-TC--TATGTATCACGG-TACAAAAACAATTG--GTGCGTGAGATG
gi|18 : GGTAGCCAGAATGTT-GC-----GCCCA-GGAAA-----TTGAATC-TGAGTAAATTGGTTGTGGAA-A--C-T-A--TATCT-T--AAAAGTGCTTTAATAA-------T--CAT-ATTATATT--CTAC---AGA-T---GAGAACTGAGAATATTG-AACATG-GTC--ATAAG--CGTG--TCAAGGTT-AGATGACACGGGG-TCCTGTTTGA--TGAAGA-T----ATAACAGTTTGATGAT-GCGTAGTGATATACTCCA-----A-AAATGACAAGAATTGTCAAAA---AACGCATA-CATCA--AACAGTATAAATTGTGAAACAG---TA
gi|19 : atactaaagttctcactttgtTGCCATCA--AACCATTGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTA--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATACGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGGTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATAAATGG--GTGAATAAGGCGttctatataatgctattatatatat
gi|2 : TCTCACTTACCACATACCT-CAC-C-TTG-GT--------GACTGTAGCGAAATTATT-GC-----GTCCT-TGAAA-----TTAGAGC-TGTGTAAATCGGTTA-GGCA----T-G-T--TTTTG-T-TGAAAATGC----TTGAAA-TTA-T--CAT-ATTATTTT--GTACTTAATAAT---GTGAAC-------ACTGGCATATT-TTA--ATGAGTTC-TG--TCAAATTT-G-ATGACATCGGG-TACTGTTTGA--TGAAGC-TGTATATAGCGGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAAAATTGTCAAAAATAAAGGGGTGTCATCA--AACCATCGAACTTGTGAAAAA----TAACCTGGTCAACCTCATA---TTTTT--TCTGCTAACTTGGGCTCACAGAGGACTGT-TTATTGATATAAGATACTTTTAGAtataggcatgctatattgaaaaaatttgtatttagccattctaaaatttgacaaatcctgatatatttcctttatatatgagatatactgtgtaaatcagtcgtgctattca
gi|2 : CCAT-T---GGCAATG-TGTTCAGTTTTCCAGAAGTGCATGT-C-TCTATATATAGAACAG-TACAAAATTAATTG--GTGTGTGAGACttgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcccattggcaatgtgttcagttttccagaagtgcatgtctctatatatagaacagtacaaaattaattggtgtgtgagac
gi|21 : tctcacttaccacatacctcaccttggtgactgtagcgaaattattgcgtccttgaaattagagctgtgtaaatcggttaggcatgtttttgttgaaaatgcttgaaattatcatattattttgtacttaataatgtgaacactggcatattttaatgagttctgtcaaatttgatgacatcgggtactgtttgatgaagctgtatatagcggtttaaagatgcgtagtgatacactgcaacaaatgggcaaaattgtcaaaaataaaggggtgtcatcaaaccatcgaacttgtgaaaaataacctggtcaacctcatattttttctgctaacttgggctcacagaggactgtttattgatataagatacttttagattgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcGTTT-GGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAATAT-GCGCAGTGATACACTGTA-----ACAAATGGGCAGAATTGTCAAAAATGAAAGGGTGCCATTA--AACCATCGAAATTGTGAAAAAC---CAACCTGGTCAACCCAATG--TTTTTT--TATTCACAATTGGACCAGGAGAGTGCATT-CTATGGGAACAAGGCACTTTTAGAACCAT-C---GGTAATG-TATTCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAACATTAATTG--TTGTGTGA
gi|23 : TTGAA-TGAAGA-T----AAAACAGTTTAGCGAA-GCATAGTGATAAGCGGCA-----ACAAATGGGCAGAATGGTCAAAAATGAAGGGGTGTCATTA--AACCATCGAAATTGTAAAAAAT---CCACCTGGTCAATCACATG---TTTTT--TCTGCTTTATTAGACTAAGAGATGACTCT-CTATGGAAACAAGACAAGCATAGAACCAT-T---GGCAATG-TCTTCAGTGTTCCAGAAAGGCATGT-C-TCTATATGTAGAACAG-TACAAAATTGATTG--GTGTGTGAGA
gi|24 : aataCTGAACAATTACCT-C-C-CTTTGC-T--------AATGGTAGGAAAATTCTT-GCTACATGTATATAGAAA-----ATAGAAC-TG
gi|24 : GGGACCTG-TTG--ATAAATTC-TG--CCAAATTT-GGATGACGGTGGATGACTTTTAGATGTGAAGTAG----ATAA-ACTTCAAACAT-Gcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaagggacctgttgataaattctgccaaatttggatgacggtggatgacttttagatgtgaagtagataaacttcaaacatgta
gi|25 : ctgaacaattacctccctttgctaatggtaggaaaattcttgctacatgtatatagaaaatagaactgcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaaTCTCACTCACCGATTGCCT-C-CTC-TTA-GT--------GATGGAAGCA---TTTTT-GC-----ACCCA-TGAAA-----TTAAAGC-TGTGT-------------CA-A--T-CAT--TTCTG-T-TGAAAATGC-----TGAAT-TTG-T--CGT-ATTTCTGT--GTAT---ATA-T---GAAAGC-------ACTGGAACGTT-TTC--ATTAGTTC-TG--CCAAATTT-GGATGACATTGGT--ACTATTTta
gi|27 : GTCTCACTTAAGAATTACCC-C-T-C-TTACATTATAACATGACGGTAGCAAGGTTTTT-AC-----GCCAA-AGAAG-----CTAGAGC-TGTGTAAAGCAGTTT-TGCA-A--T-T-T--TTTTT-TGTTAAAATAC----ATAAAA-T-G-T--CA-------TTT--GTGC---ATA-T---G---------------GGAACATT-TTT--ATTATTTC-TG--CTAAGTTT-GGATGACATTGGG-AACTGTTTGtttcatcaaattggtttaataagcattgaactgtattaaatg
gi|28 : TT-GT-----GCCCA-ATAAA-----TTAGAGA-TGTGTAAATCTGTTG-TGCA-g
gi|28 : gTG--TTTTTT--CCTGCATATATTGACAAACAGAGGAC-ATGCTATTGAAACAAATCATTTTTACAACCAT-T---TGCAATG-TGTTCAGTGTTCCAGAAGTGC----------ATATGTAGAACAG-TACAAAATTATTTG--GTGTttattccgtgtgttttttcctgcatatattgacaaacagaggacatgctattgaaacaaatcatttttacaaccatttgcaatgtgttcagtgttccagaagtgcatatgtagaacagtacaaaattatttggtgttt
gi|29 : gttgtgcccaataaattagagatgtgtaaatctgttgtgcattattccgtgATAACCTAC-C-C-CTA-GT--------GACCGTAT---GATTATTCAT-----GCACA-AGGGAGACGACTAAAGC-TATGTTAAACGGTCT-GTCA-----------TTTTT-T-CAAA---GC-----TAAAA-T---T--CTTCATTTTTTT--ATAT---CTG-TTTGGAGATG-------ACTGGAATCTG-CTA--AAGACTTT-TA--CTAAATTTGGGATGTCATtt
gi|30 : ctagatgtccTCTCACTGAAAAATTACCT-C-C-C-TTACAT--------GATGGTAGCAAGATTATT-AC-----GCCAA-AGAAA-----TTAGAGC-TGTGTAAAGCGGTTG-GGCA-A--T-T-T--TTTTG-T-TAAAAATGC----ATAAAA-T-G-T--CAT-ATTTCTTT--GTGC---ATA-T---GGGAAC-------ATTGGAA
gi|31 : G--TTTTTT--CCCGCATAATTAACCCAACAGAGGACAAT-CTAAGGGAACAATGCACCTTTAGAACCAT-T---GATAATG-TATCCAGTGATCAAGGAGCGCATGT-C-TTTATATACAGAACAG-TACAAAATTAATTGTTTTGTGCGAGA
gi|34 : GTCTCACTTACCAATTACCT-T-G-CATTG-GT--------GACGGTAGCAAGAGTATT-GC-----GCCCA-AGAAA-----TTAGAGC-TGTGTAATTCGGTTG-GGC-----C-T-TAGTTTTG-G-TGAAAAGGC----TTAAAA-
gi|35 : GGAGTGTCATCAGCAATT-TC-AAATTGC-AAACCG---CAGTCTGGTAGATACCA-G--GCTTTC--TCTGTGTATTCGGATCGACTGATGACTAT-TT
gi|38 : CTGT-CTATGGAAACAAGACACTATTAGAACCAT-T---G----------------TTCCAGAAGTG-ATTTACGTCTATATGAAGAATAG-TACAAAATTAATTG--GAGTGTGAgcagataaaaatcatt
gi|4 : GGTCTCACTGAACAATTACCT-C-C-C-TTGCAT--------GACGGTAGCGAGATTATT-AC-----GCCCA-AGAAA-----TTAGAGC-TGTGTAAAGCGGTTG-GGTA-A--T-T-T--TTTTT-T-AAAAAATGC----ATAAAA-T-G-T--CAT-ATTTCTTT--GTGC---ATA-T---GGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTT-GGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCA--AACCATCCAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTTTAGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGACGca
gi|40 : TTTTAGAAC-AT-TAATGGTATTGATTTTCAGTGATCTAGAATTGAATTT-C-TTTATAATCAGAACAG-TTCAAA
gi|41 : taaTTCTTT--GTAC---ATA-T---GAGAAC-------ATCAGAACATT-TTC--ATGATTTC-TA--CCAAGTTT-GGATGACATTGGA-TACTGTTTGttgttat
gi|42 : TCTCACTTACCAATTACCT-C-C-C-CTTTGT--------GACAGTAGCAAGTGTATT-GT-----GCCCA-AGAAA-----TAAAAGC-TGTATAA
gi|43 : AATG-TGTTCAATGTTCCGGAAGTGCATGT-C-TTTGTATGTATAACAG-TACAAAATAAGTTA--GTGTGTGAGACG
gi|44 : TGATCCAAAAGTGCATTT-C-TCTACATGCAGAACTGTTACAGAAATAA--G--TTATGTG
gi|45 : ATGTAGAACAG-TAAAAAATTAATTT--TTGTGTGAGGCG
gi|5 : gtttctatataagaaagGGTCTCACTGAACAATTACCT-C-C-C-TTACAT--------GACGGTAGCAAGATTATT-AC-----GTCAA-AGAAA-----TAAGAGC-TGTGTAAAGCGGTTG-GGTA-A--TAT-T--TTTTT-T-AAAAAATGC----ATAAAA-T-G-TGTCAT-ATTTCTTT--GTGC---ATT-T---GGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--AAAAGTTT-GGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAATAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCA--AACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTCT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGA
gi|6 : GTCTCACTTAAGAGTTACCT-C-T-G-TTACAT--------GACGGTAGCAGGATTCTT-AT-----GCCCA-AGAAA-----TTACAGC-TGTGTAAAGCGGTTG-GGCA-A--T-T-T--GTTTG-T-TAAAAATGC----ATAAAA-T-G-T--CAT-ATTCATTT--GTAC---ACA-T---GGCAAC-------ATTGGAACATT-TTA--GAAATTTT-TG--TCAAGTTT-GGATAACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATAAACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGTGGTTGCATCA--CACCATGGAAATTGTGAAAAAG---CATCCTGGTCAACCTCATG--TATTTT--TCTGGATAGTTGGACTAACAGAGGACTAC-CTATGGTAATAAGGCACTTATCGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAATATTAATTG--TTGCGTGAGA
gi|7 : TCTCACTTAAGAATTACAT-C-C-C-TTATAA--------GATGGCAGCAAGATTCTT-GT-----GACCA-AGAAA-----TTAGAGC-AGCGTAAATCTGTTG-GGCA----T-T-A--TTTTT-T-TGAAAGTGC----ATAAAAGT-G-T--CAT-ATTTCTTT--GTAT---ATA-T---ATGAAC-------ACTGGAACATT-TTC--ATGATTTC-TGTGCCAGGTTA-AGATGACATTGAG-AACTGTTTTA--TGAAGC-T----ATAACAGTTTTAAAAT-GTGTAGCGATACACTGCA-----ACAAATCGGCAGAATTGCCAAAAGTTTAGGGGTGTCATCA--AACTATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA----TTTTTT--TCTAAATATTTGGAGTGACAGATGACTAT-TTATGGAAACAAGACATTTTTAGAACCAT-T---GGTAATG-TGTTAAGTGTTCCAGAAGTGCATTT-C-TCTATATATAGAAAAG-TGTAAAATTAATTG--TTTCGTGAGA
gi|8 : GGTCTCTATGAAGAATTACCT-C-C-C-TTACAT--------GACGGTAGCAAGATTATT-AC-----GCCAA-AGAAA-----TTAGAGC-TGTGTAAAGCGGTTG-GGCA-T--T-T-T--TTTTTGT-TAAAAATGC----ATAAAA-T-G-T--CAT-ATTCCTTT--ATGC---ATA-T---TGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTT-GGGTGACATTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ATAAATGGGCAGAATTGTCAAAAACGACGGGGTGTCATAA--AACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA------ATTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGAAGAACAG-TACAAAATTAATTG--GTATGTGAGAC
gi|9 : CTCACTTACCAATTGCCT-C-C-CCTTAT-T--------GACGAAAGCAAGATTATT-AC-----GTCCA-AGAAA-----TTAGAGT-TGTGTTAATCGACTT-GGCA-----------TTATT-C-TAAAAATGC----GTAAAA-T-GGT--CAT-ATCTATTTCTGTAC---ATA-T---GGGAAC-------ATTGGAACATCCTTCTAATGAGTTC-TG--TCAAGTTT-GTATGACATTGGG-TACTGTTAGA--TAAAGA-T----ATAATAGTTTAAAGAT-ACGTTGTGATACACTGTA-----ATAAATGAGCA---------AAAATGAATGGGTATAATCA--AAACATCAAAATTGTGAAAAAAAAACAATCTGGTTAACCCCATG--TGGTGT--ACTGCATATTTAGACTTGCAGGGGACAAC-ATATGGAAACAGGACACTTTTACAACCATAT---GA-AATG-TGTTCAATGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--ATGTATGAGAC
12 sequences could not be aligned to this reference sequence:
Unaligned ( gi|1 ): TATAAATCAGACCCATGGGCCTTAACGGACACCTGATTATCCAAAAAAACAGTCACATAAGTCTATTCAGTCATAAGAAATAATTTTTTTGTCAATTTCTCTTAAGAGATTCAGTAAAGTAGGCCCCACCCCCAGGACCAAACCGTGAGACCCCAGGGACATGCAATTCACAATTTTTATAAAAGACCGATATACGTCCATAATCATGCTCACCATTTGTTTCCCAGTGCTTCCTATATTGAGAAGACGATTTTTCAAATTTTTTGGGGGGGGGACGGATGGGGACCATGCAATGCACAATTTTGATTCACCCTTATGTACCAAAGCGGCATTTCATTACGACTGAGTTTAGTTTTTGAGAAGGAGTCGAAAATGTCAATTGTTTACGGACGCACGACGACTGACAAATGCGATCGCAAAAGGTCATTTGAGACAAAGTCTCTGGTTACCTAAAATCTAATCTAATATTCTAAGTAAAACAAATACAATACATTTTCAAGCAAATACCAAAAATATTTCATCAAATTCGAGCTTTATAAACCCTTTAGTAAAATTTTTATAAATATTGATTGATTGAATATCTAGCGTCATTTTTATGCCATCGAGGGCTAACAGACGATCAGTTAACCTAACCACTGTTTCCTGGAATTTACCAGTACTCGAGCACACCCCATCTCTGCAAGTAACTGATAACTTTCCCACTTGAATCAGCGGTGAGAGACGAATGATAATGAGACACAATGTCGTATATCAATCAAGCCGGGCAGGGATTTGAACTCAGGACCCCTGGACTGACAGTCAGACGCGTAACCAACTGAGCTATTTGGGCCTGGCTTCTATGAATTAAAGGGGCATCAGCCTAAAACTGACTTATTCCACTTGTACATATTAAAATAGACTTATTCCCCTT
Unaligned ( gi|3 ): GTTCATCAGTACTAGAGCACATGTATCGCTTTACCACTTAAATCAGCAATGAGAGACAAATAACAATGACAAGCAATCATCATGTAGGCTGGACAAACGGGGATTCATAATCATGACCCTTAGCTTGATAGTCAGACCGAGCCAACCAAACTCTAATGGTGTAGCTGTTTCTCATTAGAAGTGTCTGATTTCTCTACATGTACCAGATACTAAAATATGAGTAGCTCACCTTCTTTCAACATCCTAGATTCTGGGTTGTGTAGCTTCATTTTTCTTGTCCATCTCATGTCCATCCCTAAATATATGATATAAACATTACAGTGTAAAAATAACAATTAACATATTTGTACTGACTACCATGGAGATGCATTACACAGAATAACAACATTTAACATGTTGCATTATAATCGAGGTAAAACTCCTGTTGGTTTGATTTATTTTGGATAATTTGGGTCATTTTTTGCCATCAAGTTCTTACCTAACCTCTCTTTTCTGGATACTTAAAGGTTAACAAGTATTTGAGCACACCTGTCACTTTCCCACATGAATCAGCAATGGGAGATGAATAACGACACGTAATGTTGAATATCAATCATCAAGGAGATTGGACTTACATCCTTGGATTGACAGTTGGACTGAGCCAAACAAACTCTAATGATGTAGCTCATTAGAAGTGTTCCTGGCCCAA
Unaligned ( gi|20 ): TATGGAGACGACCTAAATGGGTCCATAATCATGCTCACCATTTGTTTTACCACTGCTTCCTTTACCTTGGATTTGAGTGTTTTGGTCCTGCTCCTAAGGGGGGTGGGGACAATGTAATTCACAATTTTGATTCGACCGTAGGTACAAAAGCTGCATCCAAAATTAAATGACGATTGAGCTAACAGTTTTTGAGAAAAAGTAACAATGTGAATTGTTAATGGACACACGACGTCAGACAAAATACAATCACAAAAGGTCACTTTTAGACAAAGTCTCAGGTGACCAAATTAATC
Unaligned ( gi|22 ): AATACAGACAGATGATCAGTTAATCTTAATCTTATCTTGACAAACGGAGATTCATAATCATGACCCTTGGATTAGTCAGACCAAGACACCAAACTGATTTCTCTGCATGTTTTACCAGATACTATAATACTAGTAGCTCACCTTCCTTGATTCCTGTTTGTGTCGCTTCATTTCTCATGTTCAACATGTCCGTCCCTAAATATATGATATAAAAATTATATTGTAGGAATAACATTCAACATATTTGTACAAACTTGTTTACGCATTATACAGAATAGCAAC
Unaligned ( gi|26 ): CAAGCCAACCAAATTCTAATGGTGTAGCCAATTTCTCATTAGAAGTATTCCAGGTCTTATTTCTCTGCAAGTTGTACCAGATACTGAAATATGAGTAGCTCACCTGACCTAACTTGATTCGGGGTGACATCATTTGTCATGTCATCTCATGTCCATCCCTAAATATGATGTAAACGTTATATTGTAGAAATAGCAACATTCAACATATCT
Unaligned ( gi|32 ): GAGCCATCCAAAGGTGCAGCCCAATTTTCATTAGATGTGCTCCAGGTCTTATTTCTCTGTATTTTGTACCAGATACTAAAATACAATATAGCTCACCTTACCTTCCTTGGTTCGGGGTGTGACTTCATTTGTCATGT
Unaligned ( gi|33 ): CATGGTATTAGATATTTTTATGAAACATTGATCCAATGTCTGTCAAATGAGTTTGTTTTGAATAGATCGGGTCATATTTATGCCATCTGGGGTTAGCAGACGATCAGTTACTCTGCCCAC
Unaligned ( gi|36 ): TTTATTATCGTCATTGAATGCCTAAGAGACGATCAGTTAATATATCAGTATATATAGTTTATCAGTACTTAGGCACGCCAATCTAATCTAGTAACCGATAA
Unaligned ( gi|37 ): CCAATCTTCACAGAAAATGAGTAAAGCAGGGTTTCAAACTAACGACTCCTTAATTCAAACGCATTGCAGAATAAGCTTGCCGCGCCCTTCTGCAAAGT
Unaligned ( gi|39 ): TTACAAGGCATTTTCAGTTTGAATGTAATGTATTTTCATTTTCAAACCTTACTGATGCGAATCTTTAATATTATTTCTGACTTTTA
Unaligned ( gi|46 ): ACAGTCAGACGCACTACCAACTGAGCTATCTGGGTATGGCTTATTTAAGTTAG
Unaligned ( gi|47 ): AAATATTGATCGATTAAATATTTAGCGTCATTTTCATGC
Alignments
lowQualScore : 11111 111
lowQualScore : 1 1 2 2 4 888888888888 1 44444 1 1 1 2 33333 2 22 2 0 2 2 55555 2 4 4 22 22 333 2 6666666 2 22 2 2 22 44 55 22 4444 2 55555 0 1 333 222 22 0 1 1 333 1 1 1 1 333
lowQualScore : . . . . . ............ . ..... . . . . ..... . .. . . . . ..... . . . .. .. ... . ....... . .. . . .. .. .. .. .... . ..... . . ... ... .. . . . ... . . . . ...
lowQualScore : 0 2 0 0 0 888888888888 0 55555 8 8 2 0 99999 0 88 0 6 1 1 55555 1 4 4 99 88 555 0 5555555 0 88 0 0 88 55 00 22 5555 1 66666 1 5 777 222 88 8 9 8 222 7 7 7 7 555
consensus : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
Reference ( family-862 ) : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
gi|10 : GGTCTCACTAAAAAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTCTTAC-----GCTCA-AGGAATAAGAGC-TGTTTAAAGTGGTTG-CGCA--A--CA-T--T-TTTGTTAAAAAA-TGC----ATAAAA-T-T-T--CATATGTCTTT--GTGT---GTA-TGGAAAC-------ACTGGAACATT-TGT--ATGATTTA-TG--CCAAGTTTGGATGACATTTGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAATGAGCGCAGTTGTCATTAATGAAAGGGTGCCATCAAACCATCGAAA-TGTGAAAAAG---CAACCGGGTCTTCCCAATGTTTTTTTT--TCTGTATAATTGGACCAACAGAGGACTAT-CTATTGGAACATGGCACTTTTAGAACCGC-T---TGTAA----------TGTTCCAGAAGTGCATTT-A-TCTATATTTAGAACAG-TACAAAATTCATTG--TTGTGTGAGAC
gi|11 : GGTTTCACTGAAGAATTGTCTC-C-C-TTACA-T--------GACAGTAGCAAGATTCTTAT-----GCCAA-AGAAATTAGAAAATGTGTAAAGCGGTTG-GGCA-----TT-T--T-TTTGTTAAAA-A-TGC----ATAAAT-T-G-T--CATATTTCTTT--GTGC---ATA-TGG-AAC-------ATTGGAACATT-TTC--ATGATTT-------------TGGGTGACATTGGG-AATTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAACTGTCAAAAATGAA----TGCCATCAAACCATCGAAATTGTGAAAT-G---CAACCTGGTCAACCCAATG--TTTTTT--TCTGCATAATTAGACCAACAGAGGATTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---AGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--TTGTGTGAGAC
gi|12 : GGTCTTACTTAAGAGTTACCTC-T-C-CTACA-T--------GAAGGTAGCAAGATTATTA------GCCCG-ATAAACTAGAGC-TATGAAAATTGGTTT-GGTAT-A--TT-T--T-TTT-----AA-A-TGC----TTTAAA-T-ACT--TATGCAT-TTT--CTAC---ATA-TGATAAG-------GATGGAACGTT-GCT--ATGGGTTG-TG--CCAAGTTTGGCTGACACTGGG-TGCTGTTTGA--TGAAGA-T----ATAACAGTTTGAAGAT-GCTTAGTGATACACTGCA-----AGAATTGAACAGAATTGTCAAAAATGAA-AGGTGTCCTCAAACCATGTATATTGTTAAAAAG---CAACCATATTAA--------------T--TATGTATATTTGGAGCAACAGATGGCGAT-CTATGGATACAAGATGATTTTAGAATCAT-C---AGTAATG-TGGTCAGTGTTCCAGAAGTGCATGT-C-TCTATATTTAGAACAG-TACAAAATTAATTG--TTGTTTAAGA
gi|13 : TCACTTACCAATTATCTC-C-T-CT------------------TAG------TATTGT-----GCACA-GGAAATTAGAGC-TGTGTAAATCGGTTG-GGCA--T--TA-T--T-CTTGTTGAAA-A-T------ATG------G-T--CACATTTCTTT--GTAC---ATA-TGAGAAC-------ATTGCAACATT-TTC--ACAAGTCC-TG--CCAAGTTTGGATGACCTTGGA-TACTGTTGGA--TGAAGC-T----ATAACAGTTTAAAGAT-GTGTAGTGATACACTGCA-----ACAAATGGGCATAAATGTCAAATATGAAGGGG-GTCATCAAACAATCGAAATTGTGAAAAAT---CAGTCTGGTCGAACCCATT--ATATTT--CCTGCATATTCGGACTACCAGAAGACTAT-ATATAGAAACAAGACACTTTTAGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAAAATGAACTG--GTGTTTGAGAC
gi|14 : aTCACTTAAGAATTACCTC-C-C-TTACA-T--------GACGGTGGCAAGATTCTTAC-----GTCCG-AGAAATTAAAGC-TGTTTAAAGCGGTTG-GGCA--AAATT-G--T-TTTGTTTAAA-C-TGC----ATAAAA-T-G-T--CATATTTCGTT--GTGT---ATA-TGGGAAC-------GTTGGAACATT-TTC--ATGATTTC-TG--CTAAGTCTGGA---CAATGAG-AACTGTTTGA--TGAAAC-------------------------GTAGTGATACACTGCA-----ACAAATGAGCAGAATTGTCAAAAATGAAGGGGTGTCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG----TTAT--TCTGCATAATTTGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGT-ATG-TATCCAGTGTTCCAGAAGTGCATTT-C-TCTATATGTAGAACAG-AACAAAATTAATTG--TTGTTCGAGAC
gi|15 : aGGTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--G--TT-T--T-TTTGTTAAAA-A-TAC----CTCAAA-T-G-T--CATATTGGTTT--GTGC---ATA-TGGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTCTGGGTGACACTGGG-AACTGTTTGT--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAAAACCAT-C---CATAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAAC
gi|16 : GTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GACA--G--TT-T--T-TTTGTTAAAA-A-TGC----CTAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACACTGGG-AACTGTTTGA--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-C---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAACA
gi|17 : --CATATTTCTTT--GAAC---ATA-AGAAAAT-------ATTGGAACATT--------GG------G--CCAAAATTGGATGACAC------------------AAAGA-T----ATAAAAAAT-AAAGTTCACGGCGTGATACACTGCACAAAAAAAAATAGGCAGAGTTGTAAAAAATGAAGGGGTGTCGTCAAATCATTGACATTGTGAAATAG---CAATCCGTTCAAAACCATG--TTATTCCATC-ATATATTT--ACTAACAGAGGACAAT-CTATGG--ACCCGACACTTTTAGAACCAT-T---GGCAAAA-TGTTCAGTGTTCCAAAGGTGCATGT-C-TC--TATGTATCACGG-TACAAAAACAATTG--GTGCGTGAGATG
gi|18 : GGTAGCCAGAATGTTGC-----GCCCA-GGAAATTGAATC-TGAGTAAATTGGTTGTGGAA--A--CT-A--T-ATC-TTAAAA-G-TGCTTTAATAA-------T--CATATTATATT--CTAC---AGA-TGAGAACTGAGAATATTG-AACATG-GTC--ATAAG--CGTG--TCAAGGTTAGATGACACGGGG-TCCTGTTTGA--TGAAGA-T----ATAACAGTTTGATGAT-GCGTAGTGATATACTCCA-----A-AAATGACAAGAATTGTCAAAA---AACGCATA-CATCAAACAGTATAAATTGTGAAACAG---TA
gi|19 : atactaaagttctcactttgtTGCCATCAAACCATTGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTA--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATACGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGGTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATAAATGG--GTGAATAAGGCGttctatataatgctattatatatat
gi|2 : TCTCACTTACCACATACCTCAC-C-TTG-G-T--------GACTGTAGCGAAATTATTGC-----GTCCT-TGAAATTAGAGC-TGTGTAAATCGGTTA-GGCA-----TG-T--T-TTTGTTGAAA-A-TGC----TTGAAA-TTA-T--CATATTATTTT--GTACTTAATAATGTGAAC-------ACTGGCATATT-TTA--ATGAGTTC-TG--TCAAATTTG-ATGACATCGGG-TACTGTTTGA--TGAAGC-TGTATATAGCGGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAAAATTGTCAAAAATAAAGGGGTGTCATCAAACCATCGAACTTGTGAAAAA----TAACCTGGTCAACCTCATA---TTTTT--TCTGCTAACTTGGGCTCACAGAGGACTGT-TTATTGATATAAGATACTTTTAGAtataggcatgctatattgaaaaaatttgtatttagccattctaaaatttgacaaatcctgatatatttcctttatatatgagatatactgtgtaaatcagtcgtgctattca
gi|2 : CCAT-T---GGCAATG-TGTTCAGTTTTCCAGAAGTGCATGT-C-TCTATATATAGAACAG-TACAAAATTAATTG--GTGTGTGAGACttgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcccattggcaatgtgttcagttttccagaagtgcatgtctctatatatagaacagtacaaaattaattggtgtgtgagac
gi|21 : tctcacttaccacatacctcaccttggtgactgtagcgaaattattgcgtccttgaaattagagctgtgtaaatcggttaggcatgtttttgttgaaaatgcttgaaattatcatattattttgtacttaataatgtgaacactggcatattttaatgagttctgtcaaatttgatgacatcgggtactgtttgatgaagctgtatatagcggtttaaagatgcgtagtgatacactgcaacaaatgggcaaaattgtcaaaaataaaggggtgtcatcaaaccatcgaacttgtgaaaaataacctggtcaacctcatattttttctgctaacttgggctcacagaggactgtttattgatataagatacttttagattgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAATAT-GCGCAGTGATACACTGTA-----ACAAATGGGCAGAATTGTCAAAAATGAAAGGGTGCCATTAAACCATCGAAATTGTGAAAAAC---CAACCTGGTCAACCCAATG--TTTTTT--TATTCACAATTGGACCAGGAGAGTGCATT-CTATGGGAACAAGGCACTTTTAGAACCAT-C---GGTAATG-TATTCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAACATTAATTG--TTGTGTGA
gi|23 : TTGAA-TGAAGA-T----AAAACAGTTTAGCGAA-GCATAGTGATAAGCGGCA-----ACAAATGGGCAGAATGGTCAAAAATGAAGGGGTGTCATTAAACCATCGAAATTGTAAAAAAT---CCACCTGGTCAATCACATG---TTTTT--TCTGCTTTATTAGACTAAGAGATGACTCT-CTATGGAAACAAGACAAGCATAGAACCAT-T---GGCAATG-TCTTCAGTGTTCCAGAAAGGCATGT-C-TCTATATGTAGAACAG-TACAAAATTGATTG--GTGTGTGAGA
gi|24 : aataCTGAACAATTACCTC-C-C-TT-TGCT--------AATGGTAGGAAAATTCTTGCTACATGTATATAGAAAATAGAAC-TG
gi|24 : GGGACCTG-TTG--ATAAATTC-TG--CCAAATTTGGATGACGGTGGATGACTTTTAGATGTGAAGTAG----ATAA-ACTTCAAACAT-Gcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaagggacctgttgataaattctgccaaatttggatgacggtggatgacttttagatgtgaagtagataaacttcaaacatgta
gi|25 : ctgaacaattacctccctttgctaatggtaggaaaattcttgctacatgtatatagaaaatagaactgcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaaTCTCACTCACCGATTGCCTC-CTC-TTA-G-T--------GATGGAAGCA---TTTTTGC-----ACCCA-TGAAATTAAAGC-TGTGT-------------CA--A--TCAT--T-TCTGTTGAAA-A-TGC-----TGAAT-TTG-T--CGTATTTCTGT--GTAT---ATA-TGAAAGC-------ACTGGAACGTT-TTC--ATTAGTTC-TG--CCAAATTTGGATGACATTGGT--ACTATTTta
gi|27 : GTCTCACTTAAGAATTACCCC-T-C-TTACA-TTATAACATGACGGTAGCAAGGTTTTTAC-----GCCAA-AGAAGCTAGAGC-TGTGTAAAGCAGTTT-TGCA--ATTTT-T--T-TTTGTT-AAA-A-TAC----ATAAAA-T-G-T--CA------TTT--GTGC---ATA-TG---------------GGAACATT-TTT--ATTATTTC-TG--CTAAGTTTGGATGACATTGGG-AACTGTTTGtttcatcaaattggtttaataagcattgaactgtattaaatg
gi|28 : TTGT-----GCCCA-ATAAATTAGAGA-TGTGTAAATCTGTTG-TGC---A--TT-A--T-TCCGTg
gi|28 : gTG--TTTTTT--CCTGCATATATTGACAAACAGAGGAC-ATGCTATTGAAACAAATCATTTTTACAACCAT-T---TGCAATG-TGTTCAGTGTTCCAGAAGTGC----------ATATGTAGAACAG-TACAAAATTATTTG--GTGTgtgttttttcctgcatatattgacaaacagaggacatgctattgaaacaaatcatttttacaaccatttgcaatgtgttcagtgttccagaagtgcatatgtagaacagtacaaaattatttggtgttt
gi|30 : gttgtgcccaataaattagagatgtgtaaatctgttgtgcattattccgtgTCTCACTGAAAAATTACCTC-C-C-TTACA-T--------GATGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAAtt
gi|31 : G--TTTTTT--CCCGCATAATTAACCCAACAGAGGACAAT-CTAAGGGAACAATGCACCTTTAGAACCAT-T---GATAATG-TATCCAGTGATCAAGGAGCGCATGT-C-TTTATATACAGAACAG-TACAAAATTAATTGTTTTGTGCGAGA
gi|34 : GTCTCACTTACCAATTACCTT-G-CATTG-G-T--------GACGGTAGCAAGAGTATTGC-----GCCCA-AGAAATTAGAGC-TGTGTAATTCGGTTG-GGC------CT-TAGT-TTTGGTGAAA-A-GGC----TTAAAA-
gi|38 : CTGT-CTATGGAAACAAGACACTATTAGAACCAT-T---G----------------TTCCAGAAGTG-ATTTACGTCTATATGAAGAATAG-TACAAAATTAATTG--GAGTGTGA
gi|4 : GGTCTCACTGAACAATTACCTC-C-C-TTGCA-T--------GACGGTAGCGAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGTA--A--TT-T--T-TTTTTAAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCCAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTTTAGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGACGca
gi|40 : TTTTAGAAC-AT-TAATGGTATTGATTTTCAGTGATCTAGAATTGAATTT-C-TTTATAATCAGAACAG-TTCAAA
gi|41 : taaTTCTTT--GTAC---ATA-TGAGAAC-------ATCAGAACATT-TTC--ATGATTTC-TA--CCAAGTTTGGATGACATTGGA-TACTGTTTGttgttat
gi|42 : TCTCACTTACCAATTACCTC-C-C-CTTTG-T--------GACAGTAGCAAGTGTATTGT-----GCCCA-AGAAATAAAAGC-TGTATAA
gi|43 : AATG-TGTTCAATGTTCCGGAAGTGCATGT-C-TTTGTATGTATAACAG-TACAAAATAAGTTA--GTGTGTGAGACG
gi|44 : TGATCCAAAAGTGCATTT-C-TCTACATGCAGAACTGTTACAGAAATAA--G--TTATGTG
gi|45 : ATGTAGAACAG-TAAAAAATTAATTT--TTGTGTGAGGCG
gi|5 : gtttctatataagaaagGGTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAC-----GTCAA-AGAAATAAGAGC-TGTGTAAAGCGGTTG-GGTA--A--TA-T--T-TTTTTTAAAA-AATGC----ATAAAA-T-G-TGTCATATTTCTTT--GTGC---ATT-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--AAAAGTTTGGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAATAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTCT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGA
gi|6 : GTCTCACTTAAGAGTTACCTC-T-G-TTACA-T--------GACGGTAGCAGGATTCTTAT-----GCCCA-AGAAATTACAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--G-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTCATTT--GTAC---ACA-TGGCAAC-------ATTGGAACATT-TTA--GAAATTTT-TG--TCAAGTTTGGATAACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATAAACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGTGGTTGCATCACACCATGGAAATTGTGAAAAAG---CATCCTGGTCAACCTCATG--TATTTT--TCTGGATAGTTGGACTAACAGAGGACTAC-CTATGGTAATAAGGCACTTATCGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAATATTAATTG--TTGCGTGAGA
gi|7 : TCTCACTTAAGAATTACATC-C-C-TTATA-A--------GATGGCAGCAAGATTCTTGT-----GACCA-AGAAATTAGAGC-AGCGTAAATCTGTTG-GGCATTA--TT-T--T-TTTG---AAA-G-TGC----ATAAAAGT-G-T--CATATTTCTTT--GTAT---ATA-TATGAAC-------ACTGGAACATT-TTC--ATGATTTC-TGTGCCAGGTTAAGATGACATTGAG-AACTGTTTTA--TGAAGC-T----ATAACAGTTTTAAAAT-GTGTAGCGATACACTGCA-----ACAAATCGGCAGAATTGCCAAAAGTTTAGGGGTGTCATCAAACTATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA----TTTTTT--TCTAAATATTTGGAGTGACAGATGACTAT-TTATGGAAACAAGACATTTTTAGAACCAT-T---GGTAATG-TGTTAAGTGTTCCAGAAGTGCATTT-C-TCTATATATAGAAAAG-TGTAAAATTAATTG--TTTCGTGAGA
gi|8 : GGTCTCTATGAAGAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--T--TT-T--TTTTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTCCTTT--ATGC---ATA-TTGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACATTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ATAAATGGGCAGAATTGTCAAAAACGACGGGGTGTCATAAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA------ATTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGAAGAACAG-TACAAAATTAATTG--GTATGTGAGAC
gi|9 : CTCACTTACCAATTGCCTC-C-CCTTAT--T--------GACGAAAGCAAGATTATTAC-----GTCCA-AGAAATTAGAGT-TGTGTTAATCGACTT-GGCA--------T--T-ATT-CTAAAA-A-TGC----GTAAAA-T-GGT--CATATCTATTTCTGTAC---ATA-TGGGAAC-------ATTGGAACATCCTTCTAATGAGTTC-TG--TCAAGTTTGTATGACATTGGG-TACTGTTAGA--TAAAGA-T----ATAATAGTTTAAAGAT-ACGTTGTGATACACTGTA-----ATAAATGAGCA---------AAAATGAATGGGTATAATCAAAACATCAAAATTGTGAAAAAAAAACAATCTGGTTAACCCCATG--TGGTGT--ACTGCATATTTAGACTTGCAGGGGACAAC-ATATGGAAACAGGACACTTTTACAACCATAT---GA-AATG-TGTTCAATGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--ATGTATGAGAC
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|1 ): TATAAATCAGACCCATGGGCCTTAACGGACACCTGATTATCCAAAAAAACAGTCACATAAGTCTATTCAGTCATAAGAAATAATTTTTTTGTCAATTTCTCTTAAGAGATTCAGTAAAGTAGGCCCCACCCCCAGGACCAAACCGTGAGACCCCAGGGACATGCAATTCACAATTTTTATAAAAGACCGATATACGTCCATAATCATGCTCACCATTTGTTTCCCAGTGCTTCCTATATTGAGAAGACGATTTTTCAAATTTTTTGGGGGGGGGACGGATGGGGACCATGCAATGCACAATTTTGATTCACCCTTATGTACCAAAGCGGCATTTCATTACGACTGAGTTTAGTTTTTGAGAAGGAGTCGAAAATGTCAATTGTTTACGGACGCACGACGACTGACAAATGCGATCGCAAAAGGTCATTTGAGACAAAGTCTCTGGTTACCTAAAATCTAATCTAATATTCTAAGTAAAACAAATACAATACATTTTCAAGCAAATACCAAAAATATTTCATCAAATTCGAGCTTTATAAACCCTTTAGTAAAATTTTTATAAATATTGATTGATTGAATATCTAGCGTCATTTTTATGCCATCGAGGGCTAACAGACGATCAGTTAACCTAACCACTGTTTCCTGGAATTTACCAGTACTCGAGCACACCCCATCTCTGCAAGTAACTGATAACTTTCCCACTTGAATCAGCGGTGAGAGACGAATGATAATGAGACACAATGTCGTATATCAATCAAGCCGGGCAGGGATTTGAACTCAGGACCCCTGGACTGACAGTCAGACGCGTAACCAACTGAGCTATTTGGGCCTGGCTTCTATGAATTAAAGGGGCATCAGCCTAAAACTGACTTATTCCACTTGTACATATTAAAATAGACTTATTCCCCTT
Unaligned ( gi|3 ): GTTCATCAGTACTAGAGCACATGTATCGCTTTACCACTTAAATCAGCAATGAGAGACAAATAACAATGACAAGCAATCATCATGTAGGCTGGACAAACGGGGATTCATAATCATGACCCTTAGCTTGATAGTCAGACCGAGCCAACCAAACTCTAATGGTGTAGCTGTTTCTCATTAGAAGTGTCTGATTTCTCTACATGTACCAGATACTAAAATATGAGTAGCTCACCTTCTTTCAACATCCTAGATTCTGGGTTGTGTAGCTTCATTTTTCTTGTCCATCTCATGTCCATCCCTAAATATATGATATAAACATTACAGTGTAAAAATAACAATTAACATATTTGTACTGACTACCATGGAGATGCATTACACAGAATAACAACATTTAACATGTTGCATTATAATCGAGGTAAAACTCCTGTTGGTTTGATTTATTTTGGATAATTTGGGTCATTTTTTGCCATCAAGTTCTTACCTAACCTCTCTTTTCTGGATACTTAAAGGTTAACAAGTATTTGAGCACACCTGTCACTTTCCCACATGAATCAGCAATGGGAGATGAATAACGACACGTAATGTTGAATATCAATCATCAAGGAGATTGGACTTACATCCTTGGATTGACAGTTGGACTGAGCCAAACAAACTCTAATGATGTAGCTCATTAGAAGTGTTCCTGGCCCAA
Unaligned ( gi|20 ): TATGGAGACGACCTAAATGGGTCCATAATCATGCTCACCATTTGTTTTACCACTGCTTCCTTTACCTTGGATTTGAGTGTTTTGGTCCTGCTCCTAAGGGGGGTGGGGACAATGTAATTCACAATTTTGATTCGACCGTAGGTACAAAAGCTGCATCCAAAATTAAATGACGATTGAGCTAACAGTTTTTGAGAAAAAGTAACAATGTGAATTGTTAATGGACACACGACGTCAGACAAAATACAATCACAAAAGGTCACTTTTAGACAAAGTCTCAGGTGACCAAATTAATC
Unaligned ( gi|22 ): AATACAGACAGATGATCAGTTAATCTTAATCTTATCTTGACAAACGGAGATTCATAATCATGACCCTTGGATTAGTCAGACCAAGACACCAAACTGATTTCTCTGCATGTTTTACCAGATACTATAATACTAGTAGCTCACCTTCCTTGATTCCTGTTTGTGTCGCTTCATTTCTCATGTTCAACATGTCCGTCCCTAAATATATGATATAAAAATTATATTGTAGGAATAACATTCAACATATTTGTACAAACTTGTTTACGCATTATACAGAATAGCAAC
Unaligned ( gi|26 ): CAAGCCAACCAAATTCTAATGGTGTAGCCAATTTCTCATTAGAAGTATTCCAGGTCTTATTTCTCTGCAAGTTGTACCAGATACTGAAATATGAGTAGCTCACCTGACCTAACTTGATTCGGGGTGACATCATTTGTCATGTCATCTCATGTCCATCCCTAAATATGATGTAAACGTTATATTGTAGAAATAGCAACATTCAACATATCT
Unaligned ( gi|29 ): CTAGATGTCCATAACCTACCCCTAGTGACCGTATGATTATTCATGCACAAGGGAGACGACTAAAGCTATGTTAAACGGTCTGTCATTTTTTCAAAGCTAAAATTCTTCATTTTTTTATATCTGTTTGGAGATGACTGGAATCTGCTAAAGACTTTTACTAAATTTGGGATGTCAT
Unaligned ( gi|32 ): GAGCCATCCAAAGGTGCAGCCCAATTTTCATTAGATGTGCTCCAGGTCTTATTTCTCTGTATTTTGTACCAGATACTAAAATACAATATAGCTCACCTTACCTTCCTTGGTTCGGGGTGTGACTTCATTTGTCATGT
Unaligned ( gi|33 ): CATGGTATTAGATATTTTTATGAAACATTGATCCAATGTCTGTCAAATGAGTTTGTTTTGAATAGATCGGGTCATATTTATGCCATCTGGGGTTAGCAGACGATCAGTTACTCTGCCCAC
Unaligned ( gi|35 ): GGAGTGTCATCAGCAATTTCAAATTGCAAACCGCAGTCTGGTAGATACCAGGCTTTCTCTGTGTATTCGGATCGACTGATGACTATTTGCAGATAAAAATCATT
Unaligned ( gi|36 ): TTTATTATCGTCATTGAATGCCTAAGAGACGATCAGTTAATATATCAGTATATATAGTTTATCAGTACTTAGGCACGCCAATCTAATCTAGTAACCGATAA
Unaligned ( gi|37 ): CCAATCTTCACAGAAAATGAGTAAAGCAGGGTTTCAAACTAACGACTCCTTAATTCAAACGCATTGCAGAATAAGCTTGCCGCGCCCTTCTGCAAAGT
Unaligned ( gi|39 ): TTACAAGGCATTTTCAGTTTGAATGTAATGTATTTTCATTTTCAAACCTTACTGATGCGAATCTTTAATATTATTTCTGACTTTTA
Unaligned ( gi|46 ): ACAGTCAGACGCACTACCAACTGAGCTATCTGGGTATGGCTTATTTAAGTTAG
Unaligned ( gi|47 ): AAATATTGATCGATTAAATATTTAGCGTCATTTTCATGC
Alignments
lowQualScore : 11111 111
lowQualScore : 1 1 2 2 4 888888888888 1 44444 1 1 1 2 33333 2 22 2 0 2 2 55555 2 4 4 22 22 333 2 6666666 2 22 2 2 22 44 55 22 4444 2 55555 0 1 333 222 22 0 1 1 333 1 1 1 1 333
lowQualScore : . . . . . ............ . ..... . . . . ..... . .. . . . . ..... . . . .. .. ... . ....... . .. . . .. .. .. .. .... . ..... . . ... ... .. . . . ... . . . . ...
lowQualScore : 0 2 0 0 0 888888888888 0 55555 8 8 2 0 99999 0 88 0 6 1 1 55555 1 4 4 99 88 555 0 5555555 0 88 0 0 88 55 00 22 5555 1 66666 1 5 777 222 88 8 9 8 222 7 7 7 7 555
consensus : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
Reference ( family-862 ) : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
gi|10 : GGTCTCACTAAAAAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTCTTAC-----GCTCA-AGGAATAAGAGC-TGTTTAAAGTGGTTG-CGCA--A--CA-T--T-TTTGTTAAAAAA-TGC----ATAAAA-T-T-T--CATATGTCTTT--GTGT---GTA-TGGAAAC-------ACTGGAACATT-TGT--ATGATTTA-TG--CCAAGTTTGGATGACATTTGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAATGAGCGCAGTTGTCATTAATGAAAGGGTGCCATCAAACCATCGAAA-TGTGAAAAAG---CAACCGGGTCTTCCCAATGTTTTTTTT--TCTGTATAATTGGACCAACAGAGGACTAT-CTATTGGAACATGGCACTTTTAGAACCGC-T---TGTAA----------TGTTCCAGAAGTGCATTT-A-TCTATATTTAGAACAG-TACAAAATTCATTG--TTGTGTGAGAC
gi|11 : GGTTTCACTGAAGAATTGTCTC-C-C-TTACA-T--------GACAGTAGCAAGATTCTTAT-----GCCAA-AGAAATTAGAAAATGTGTAAAGCGGTTG-GGCA-----TT-T--T-TTTGTTAAAA-A-TGC----ATAAAT-T-G-T--CATATTTCTTT--GTGC---ATA-TGG-AAC-------ATTGGAACATT-TTC--ATGATTT-------------TGGGTGACATTGGG-AATTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAACTGTCAAAAATGAA----TGCCATCAAACCATCGAAATTGTGAAAT-G---CAACCTGGTCAACCCAATG--TTTTTT--TCTGCATAATTAGACCAACAGAGGATTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---AGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--TTGTGTGAGAC
gi|12 : GGTCTTACTTAAGAGTTACCTC-T-C-CTACA-T--------GAAGGTAGCAAGATTATTA------GCCCG-ATAAACTAGAGC-TATGAAAATTGGTTT-GGTAT-A--TT-T--T-TTT-----AA-A-TGC----TTTAAA-T-ACT--TATGCAT-TTT--CTAC---ATA-TGATAAG-------GATGGAACGTT-GCT--ATGGGTTG-TG--CCAAGTTTGGCTGACACTGGG-TGCTGTTTGA--TGAAGA-T----ATAACAGTTTGAAGAT-GCTTAGTGATACACTGCA-----AGAATTGAACAGAATTGTCAAAAATGAA-AGGTGTCCTCAAACCATGTATATTGTTAAAAAG---CAACCATATTAA--------------T--TATGTATATTTGGAGCAACAGATGGCGAT-CTATGGATACAAGATGATTTTAGAATCAT-C---AGTAATG-TGGTCAGTGTTCCAGAAGTGCATGT-C-TCTATATTTAGAACAG-TACAAAATTAATTG--TTGTTTAAGA
gi|13 : TCACTTACCAATTATCTC-C-T-CT------------------TAG------TATTGT-----GCACA-GGAAATTAGAGC-TGTGTAAATCGGTTG-GGCA--T--TA-T--T-CTTGTTGAAA-A-T------ATG------G-T--CACATTTCTTT--GTAC---ATA-TGAGAAC-------ATTGCAACATT-TTC--ACAAGTCC-TG--CCAAGTTTGGATGACCTTGGA-TACTGTTGGA--TGAAGC-T----ATAACAGTTTAAAGAT-GTGTAGTGATACACTGCA-----ACAAATGGGCATAAATGTCAAATATGAAGGGG-GTCATCAAACAATCGAAATTGTGAAAAAT---CAGTCTGGTCGAACCCATT--ATATTT--CCTGCATATTCGGACTACCAGAAGACTAT-ATATAGAAACAAGACACTTTTAGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAAAATGAACTG--GTGTTTGAGAC
gi|14 : aTCACTTAAGAATTACCTC-C-C-TTACA-T--------GACGGTGGCAAGATTCTTAC-----GTCCG-AGAAATTAAAGC-TGTTTAAAGCGGTTG-GGCA--AAATT-G--T-TTTGTTTAAA-C-TGC----ATAAAA-T-G-T--CATATTTCGTT--GTGT---ATA-TGGGAAC-------GTTGGAACATT-TTC--ATGATTTC-TG--CTAAGTCTGGA---CAATGAG-AACTGTTTGA--TGAAAC-------------------------GTAGTGATACACTGCA-----ACAAATGAGCAGAATTGTCAAAAATGAAGGGGTGTCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG----TTAT--TCTGCATAATTTGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGT-ATG-TATCCAGTGTTCCAGAAGTGCATTT-C-TCTATATGTAGAACAG-AACAAAATTAATTG--TTGTTCGAGAC
gi|15 : aGGTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--G--TT-T--T-TTTGTTAAAA-A-TAC----CTCAAA-T-G-T--CATATTGGTTT--GTGC---ATA-TGGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTCTGGGTGACACTGGG-AACTGTTTGT--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAAAACCAT-C---CATAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAAC
gi|16 : GTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GACA--G--TT-T--T-TTTGTTAAAA-A-TGC----CTAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACACTGGG-AACTGTTTGA--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-C---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAACA
gi|17 : --CATATTTCTTT--GAAC---ATA-AGAAAAT-------ATTGGAACATT--------GG------G--CCAAAATTGGATGACAC------------------AAAGA-T----ATAAAAAAT-AAAGTTCACGGCGTGATACACTGCACAAAAAAAAATAGGCAGAGTTGTAAAAAATGAAGGGGTGTCGTCAAATCATTGACATTGTGAAATAG---CAATCCGTTCAAAACCATG--TTATTCCATC-ATATATTT--ACTAACAGAGGACAAT-CTATGG--ACCCGACACTTTTAGAACCAT-T---GGCAAAA-TGTTCAGTGTTCCAAAGGTGCATGT-C-TC--TATGTATCACGG-TACAAAAACAATTG--GTGCGTGAGATG
gi|18 : GGTAGCCAGAATGTTGC-----GCCCA-GGAAATTGAATC-TGAGTAAATTGGTTGTGGAA--A--CT-A--T-ATC-TTAAAA-G-TGCTTTAATAA-------T--CATATTATATT--CTAC---AGA-TGAGAACTGAGAATATTG-AACATG-GTC--ATAAG--CGTG--TCAAGGTTAGATGACACGGGG-TCCTGTTTGA--TGAAGA-T----ATAACAGTTTGATGAT-GCGTAGTGATATACTCCA-----A-AAATGACAAGAATTGTCAAAA---AACGCATA-CATCAAACAGTATAAATTGTGAAACAG---TA
gi|19 : atactaaagttctcactttgtTGCCATCAAACCATTGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTA--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATACGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGGTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATAAATGG--GTGAATAAGGCGttctatataatgctattatatatat
gi|2 : TCTCACTTACCACATACCTCAC-C-TTG-G-T--------GACTGTAGCGAAATTATTGC-----GTCCT-TGAAATTAGAGC-TGTGTAAATCGGTTA-GGCA-----TG-T--T-TTTGTTGAAA-A-TGC----TTGAAA-TTA-T--CATATTATTTT--GTACTTAATAATGTGAAC-------ACTGGCATATT-TTA--ATGAGTTC-TG--TCAAATTTG-ATGACATCGGG-TACTGTTTGA--TGAAGC-TGTATATAGCGGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAAAATTGTCAAAAATAAAGGGGTGTCATCAAACCATCGAACTTGTGAAAAA----TAACCTGGTCAACCTCATA---TTTTT--TCTGCTAACTTGGGCTCACAGAGGACTGT-TTATTGATATAAGATACTTTTAGAtataggcatgctatattgaaaaaatttgtatttagccattctaaaatttgacaaatcctgatatatttcctttatatatgagatatactgtgtaaatcagtcgtgctattca
gi|2 : CCAT-T---GGCAATG-TGTTCAGTTTTCCAGAAGTGCATGT-C-TCTATATATAGAACAG-TACAAAATTAATTG--GTGTGTGAGACttgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcccattggcaatgtgttcagttttccagaagtgcatgtctctatatatagaacagtacaaaattaattggtgtgtgagac
gi|21 : tctcacttaccacatacctcaccttggtgactgtagcgaaattattgcgtccttgaaattagagctgtgtaaatcggttaggcatgtttttgttgaaaatgcttgaaattatcatattattttgtacttaataatgtgaacactggcatattttaatgagttctgtcaaatttgatgacatcgggtactgtttgatgaagctgtatatagcggtttaaagatgcgtagtgatacactgcaacaaatgggcaaaattgtcaaaaataaaggggtgtcatcaaaccatcgaacttgtgaaaaataacctggtcaacctcatattttttctgctaacttgggctcacagaggactgtttattgatataagatacttttagattgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAATAT-GCGCAGTGATACACTGTA-----ACAAATGGGCAGAATTGTCAAAAATGAAAGGGTGCCATTAAACCATCGAAATTGTGAAAAAC---CAACCTGGTCAACCCAATG--TTTTTT--TATTCACAATTGGACCAGGAGAGTGCATT-CTATGGGAACAAGGCACTTTTAGAACCAT-C---GGTAATG-TATTCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAACATTAATTG--TTGTGTGA
gi|23 : TTGAA-TGAAGA-T----AAAACAGTTTAGCGAA-GCATAGTGATAAGCGGCA-----ACAAATGGGCAGAATGGTCAAAAATGAAGGGGTGTCATTAAACCATCGAAATTGTAAAAAAT---CCACCTGGTCAATCACATG---TTTTT--TCTGCTTTATTAGACTAAGAGATGACTCT-CTATGGAAACAAGACAAGCATAGAACCAT-T---GGCAATG-TCTTCAGTGTTCCAGAAAGGCATGT-C-TCTATATGTAGAACAG-TACAAAATTGATTG--GTGTGTGAGA
gi|24 : aataCTGAACAATTACCTC-C-C-TT-TGCT--------AATGGTAGGAAAATTCTTGCTACATGTATATAGAAAATAGAAC-TG
gi|24 : GGGACCTG-TTG--ATAAATTC-TG--CCAAATTTGGATGACGGTGGATGACTTTTAGATGTGAAGTAG----ATAA-ACTTCAAACAT-Gcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaagggacctgttgataaattctgccaaatttggatgacggtggatgacttttagatgtgaagtagataaacttcaaacatgta
gi|25 : ctgaacaattacctccctttgctaatggtaggaaaattcttgctacatgtatatagaaaatagaactgcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaaTCTCACTCACCGATTGCCTC-CTC-TTA-G-T--------GATGGAAGCA---TTTTTGC-----ACCCA-TGAAATTAAAGC-TGTGT-------------CA--A--TCAT--T-TCTGTTGAAA-A-TGC-----TGAAT-TTG-T--CGTATTTCTGT--GTAT---ATA-TGAAAGC-------ACTGGAACGTT-TTC--ATTAGTTC-TG--CCAAATTTGGATGACATTGGT--ACTATTTta
gi|27 : GTCTCACTTAAGAATTACCCC-T-C-TTACA-TTATAACATGACGGTAGCAAGGTTTTTAC-----GCCAA-AGAAGCTAGAGC-TGTGTAAAGCAGTTT-TGCA--ATTTT-T--T-TTTGTT-AAA-A-TAC----ATAAAA-T-G-T--CA------TTT--GTGC---ATA-TG---------------GGAACATT-TTT--ATTATTTC-TG--CTAAGTTTGGATGACATTGGG-AACTGTTTGtttcatcaaattggtttaataagcattgaactgtattaaatg
gi|28 : TTGT-----GCCCA-ATAAATTAGAGA-TGTGTAAATCTGTTG-TGC---A--TT-A--T-TCCGTg
gi|28 : gTG--TTTTTT--CCTGCATATATTGACAAACAGAGGAC-ATGCTATTGAAACAAATCATTTTTACAACCAT-T---TGCAATG-TGTTCAGTGTTCCAGAAGTGC----------ATATGTAGAACAG-TACAAAATTATTTG--GTGTgtgttttttcctgcatatattgacaaacagaggacatgctattgaaacaaatcatttttacaaccatttgcaatgtgttcagtgttccagaagtgcatatgtagaacagtacaaaattatttggtgttt
gi|30 : gttgtgcccaataaattagagatgtgtaaatctgttgtgcattattccgtgTCTCACTGAAAAATTACCTC-C-C-TTACA-T--------GATGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAAtt
gi|31 : G--TTTTTT--CCCGCATAATTAACCCAACAGAGGACAAT-CTAAGGGAACAATGCACCTTTAGAACCAT-T---GATAATG-TATCCAGTGATCAAGGAGCGCATGT-C-TTTATATACAGAACAG-TACAAAATTAATTGTTTTGTGCGAGA
gi|34 : GTCTCACTTACCAATTACCTT-G-CATTG-G-T--------GACGGTAGCAAGAGTATTGC-----GCCCA-AGAAATTAGAGC-TGTGTAATTCGGTTG-GGC------CT-TAGT-TTTGGTGAAA-A-GGC----TTAAAA-
gi|38 : CTGT-CTATGGAAACAAGACACTATTAGAACCAT-T---G----------------TTCCAGAAGTG-ATTTACGTCTATATGAAGAATAG-TACAAAATTAATTG--GAGTGTGA
gi|4 : GGTCTCACTGAACAATTACCTC-C-C-TTGCA-T--------GACGGTAGCGAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGTA--A--TT-T--T-TTTTTAAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCCAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTTTAGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGACGca
gi|40 : TTTTAGAAC-AT-TAATGGTATTGATTTTCAGTGATCTAGAATTGAATTT-C-TTTATAATCAGAACAG-TTCAAA
gi|41 : taaTTCTTT--GTAC---ATA-TGAGAAC-------ATCAGAACATT-TTC--ATGATTTC-TA--CCAAGTTTGGATGACATTGGA-TACTGTTTGttgttat
gi|42 : TCTCACTTACCAATTACCTC-C-C-CTTTG-T--------GACAGTAGCAAGTGTATTGT-----GCCCA-AGAAATAAAAGC-TGTATAA
gi|43 : AATG-TGTTCAATGTTCCGGAAGTGCATGT-C-TTTGTATGTATAACAG-TACAAAATAAGTTA--GTGTGTGAGACG
gi|44 : TGATCCAAAAGTGCATTT-C-TCTACATGCAGAACTGTTACAGAAATAA--G--TTATGTG
gi|45 : ATGTAGAACAG-TAAAAAATTAATTT--TTGTGTGAGGCG
gi|5 : gtttctatataagaaagGGTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAC-----GTCAA-AGAAATAAGAGC-TGTGTAAAGCGGTTG-GGTA--A--TA-T--T-TTTTTTAAAA-AATGC----ATAAAA-T-G-TGTCATATTTCTTT--GTGC---ATT-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--AAAAGTTTGGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAATAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTCT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGA
gi|6 : GTCTCACTTAAGAGTTACCTC-T-G-TTACA-T--------GACGGTAGCAGGATTCTTAT-----GCCCA-AGAAATTACAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--G-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTCATTT--GTAC---ACA-TGGCAAC-------ATTGGAACATT-TTA--GAAATTTT-TG--TCAAGTTTGGATAACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATAAACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGTGGTTGCATCACACCATGGAAATTGTGAAAAAG---CATCCTGGTCAACCTCATG--TATTTT--TCTGGATAGTTGGACTAACAGAGGACTAC-CTATGGTAATAAGGCACTTATCGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAATATTAATTG--TTGCGTGAGA
gi|7 : TCTCACTTAAGAATTACATC-C-C-TTATA-A--------GATGGCAGCAAGATTCTTGT-----GACCA-AGAAATTAGAGC-AGCGTAAATCTGTTG-GGCATTA--TT-T--T-TTTG---AAA-G-TGC----ATAAAAGT-G-T--CATATTTCTTT--GTAT---ATA-TATGAAC-------ACTGGAACATT-TTC--ATGATTTC-TGTGCCAGGTTAAGATGACATTGAG-AACTGTTTTA--TGAAGC-T----ATAACAGTTTTAAAAT-GTGTAGCGATACACTGCA-----ACAAATCGGCAGAATTGCCAAAAGTTTAGGGGTGTCATCAAACTATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA----TTTTTT--TCTAAATATTTGGAGTGACAGATGACTAT-TTATGGAAACAAGACATTTTTAGAACCAT-T---GGTAATG-TGTTAAGTGTTCCAGAAGTGCATTT-C-TCTATATATAGAAAAG-TGTAAAATTAATTG--TTTCGTGAGA
gi|8 : GGTCTCTATGAAGAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--T--TT-T--TTTTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTCCTTT--ATGC---ATA-TTGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACATTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ATAAATGGGCAGAATTGTCAAAAACGACGGGGTGTCATAAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA------ATTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGAAGAACAG-TACAAAATTAATTG--GTATGTGAGAC
gi|9 : CTCACTTACCAATTGCCTC-C-CCTTAT--T--------GACGAAAGCAAGATTATTAC-----GTCCA-AGAAATTAGAGT-TGTGTTAATCGACTT-GGCA--------T--T-ATT-CTAAAA-A-TGC----GTAAAA-T-GGT--CATATCTATTTCTGTAC---ATA-TGGGAAC-------ATTGGAACATCCTTCTAATGAGTTC-TG--TCAAGTTTGTATGACATTGGG-TACTGTTAGA--TAAAGA-T----ATAATAGTTTAAAGAT-ACGTTGTGATACACTGTA-----ATAAATGAGCA---------AAAATGAATGGGTATAATCAAAACATCAAAATTGTGAAAAAAAAACAATCTGGTTAACCCCATG--TGGTGT--ACTGCATATTTAGACTTGCAGGGGACAAC-ATATGGAAACAGGACACTTTTACAACCATAT---GA-AATG-TGTTCAATGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--ATGTATGAGAC
blockSeqs : G G A T A CATTATAACAT C TACAT T A G T AAA A AG T . A TTTAA G T C GT CT TTA A TGAGAAT C TA T G TG TG TG TA GTAT C CAAAA C AAA T CA G A AAT A A G T TTT
blockSeqs : T G . . C TGCT A . . . T . ATT . . . . . A . T G . . . . . . . G . . A A C . . . T . A . . . . . . . . T
blockSeqs : T C . . . CAT A . . . T . TTA . . . . . T . . . . . . . . . . G . . T . A . . . T . T . . . . . . . . T
blockSeqs : T G . . . CAT C . . . G . TA . . . . . A . . . . . . . . . . T . . T . C . . . T . T . . . . . . . . G
blockSeqs : G C . . . CAT A . . . G . T . . . . . A . . . . . . . . . . T . . A . C . . . C . T . . . . . . . . T
blockSeqs : G C . . . CAT A . . . G . G . . . . . C . . . . . . . . . . T . . A . G . . . C . T . . . . . . . . G
blockSeqs : T C . . . CAT G . . . T . G . . . . . C . . . . . . . . . . G . . A . G . . . T . T . . . . . . . . G
blockSeqs : G C . . . CAT A . . . T . A . . . . . T . . . . . . . . . . G . . T . A . . . C . T . . . . . . . . G
blockSeqs : C C . . . CAT C . . . G . A . . . . . A . . . . . . . . . . A . . T . A . . . T . T . . . . . . . . T
blockSeqs : T G . . . TGT T . . . T . A . . . . . A . . . . . . . . . . G . . A . C . . . C . T . . . . . . . . G
blockSeqs : G A . . . CAT T . . . G . A . . . . . T . . . . . . . . . . T . . A . C . . . T . T . . . . . . . . G
blockSeqs : T C . . . CAT A . . . T . A . . . . . A . . . . . . . . . . T . . A . A . . . C . . . . . . . . . . G
blockSeqs : G C . . . TAA A . . . G . A . . . . . A . . . . . . . . . . T . . T . C . . . C . . . . . . . . . . G
blockSeqs : T C . . . CAT A . . . G . A . . . . . A . . . . . . . . . . T . . A . C . . . G . . . . . . . . . . G
blockSeqs : G C . . . GT A . . . G . T . . . . . A . . . . . . . . . . T . . A . C . . . T . . . . . . . . . . T
blockSeqs : T G . . . GT A . . . T . . . . . . . A . . . . . . . . . . T . . A . C . . . T . . . . . . . . . . T
blockSeqs : T G . . . GT C . . . G . . . . . . . G . . . . . . . . . . T . . A . C . . . T . . . . . . . . . . G
blockSeqs : G G . . . TT C . . . T . . . . . . . . . . . . . . . . G . . T . A . . . . . . . . . . . . . T
blockSeqs : T C . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . T
blockSeqs : A . . . . . . . . . . . G
blockSeqs : . . . . . . . . . A
blockSeqs : . . . .
blockSeqs : . .
blockSeqCons : T**
originalCons : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
finalCons : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATGT--TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|1 ): TATAAATCAGACCCATGGGCCTTAACGGACACCTGATTATCCAAAAAAACAGTCACATAAGTCTATTCAGTCATAAGAAATAATTTTTTTGTCAATTTCTCTTAAGAGATTCAGTAAAGTAGGCCCCACCCCCAGGACCAAACCGTGAGACCCCAGGGACATGCAATTCACAATTTTTATAAAAGACCGATATACGTCCATAATCATGCTCACCATTTGTTTCCCAGTGCTTCCTATATTGAGAAGACGATTTTTCAAATTTTTTGGGGGGGGGACGGATGGGGACCATGCAATGCACAATTTTGATTCACCCTTATGTACCAAAGCGGCATTTCATTACGACTGAGTTTAGTTTTTGAGAAGGAGTCGAAAATGTCAATTGTTTACGGACGCACGACGACTGACAAATGCGATCGCAAAAGGTCATTTGAGACAAAGTCTCTGGTTACCTAAAATCTAATCTAATATTCTAAGTAAAACAAATACAATACATTTTCAAGCAAATACCAAAAATATTTCATCAAATTCGAGCTTTATAAACCCTTTAGTAAAATTTTTATAAATATTGATTGATTGAATATCTAGCGTCATTTTTATGCCATCGAGGGCTAACAGACGATCAGTTAACCTAACCACTGTTTCCTGGAATTTACCAGTACTCGAGCACACCCCATCTCTGCAAGTAACTGATAACTTTCCCACTTGAATCAGCGGTGAGAGACGAATGATAATGAGACACAATGTCGTATATCAATCAAGCCGGGCAGGGATTTGAACTCAGGACCCCTGGACTGACAGTCAGACGCGTAACCAACTGAGCTATTTGGGCCTGGCTTCTATGAATTAAAGGGGCATCAGCCTAAAACTGACTTATTCCACTTGTACATATTAAAATAGACTTATTCCCCTT
Unaligned ( gi|3 ): GTTCATCAGTACTAGAGCACATGTATCGCTTTACCACTTAAATCAGCAATGAGAGACAAATAACAATGACAAGCAATCATCATGTAGGCTGGACAAACGGGGATTCATAATCATGACCCTTAGCTTGATAGTCAGACCGAGCCAACCAAACTCTAATGGTGTAGCTGTTTCTCATTAGAAGTGTCTGATTTCTCTACATGTACCAGATACTAAAATATGAGTAGCTCACCTTCTTTCAACATCCTAGATTCTGGGTTGTGTAGCTTCATTTTTCTTGTCCATCTCATGTCCATCCCTAAATATATGATATAAACATTACAGTGTAAAAATAACAATTAACATATTTGTACTGACTACCATGGAGATGCATTACACAGAATAACAACATTTAACATGTTGCATTATAATCGAGGTAAAACTCCTGTTGGTTTGATTTATTTTGGATAATTTGGGTCATTTTTTGCCATCAAGTTCTTACCTAACCTCTCTTTTCTGGATACTTAAAGGTTAACAAGTATTTGAGCACACCTGTCACTTTCCCACATGAATCAGCAATGGGAGATGAATAACGACACGTAATGTTGAATATCAATCATCAAGGAGATTGGACTTACATCCTTGGATTGACAGTTGGACTGAGCCAAACAAACTCTAATGATGTAGCTCATTAGAAGTGTTCCTGGCCCAA
Unaligned ( gi|20 ): TATGGAGACGACCTAAATGGGTCCATAATCATGCTCACCATTTGTTTTACCACTGCTTCCTTTACCTTGGATTTGAGTGTTTTGGTCCTGCTCCTAAGGGGGGTGGGGACAATGTAATTCACAATTTTGATTCGACCGTAGGTACAAAAGCTGCATCCAAAATTAAATGACGATTGAGCTAACAGTTTTTGAGAAAAAGTAACAATGTGAATTGTTAATGGACACACGACGTCAGACAAAATACAATCACAAAAGGTCACTTTTAGACAAAGTCTCAGGTGACCAAATTAATC
Unaligned ( gi|22 ): AATACAGACAGATGATCAGTTAATCTTAATCTTATCTTGACAAACGGAGATTCATAATCATGACCCTTGGATTAGTCAGACCAAGACACCAAACTGATTTCTCTGCATGTTTTACCAGATACTATAATACTAGTAGCTCACCTTCCTTGATTCCTGTTTGTGTCGCTTCATTTCTCATGTTCAACATGTCCGTCCCTAAATATATGATATAAAAATTATATTGTAGGAATAACATTCAACATATTTGTACAAACTTGTTTACGCATTATACAGAATAGCAAC
Unaligned ( gi|26 ): CAAGCCAACCAAATTCTAATGGTGTAGCCAATTTCTCATTAGAAGTATTCCAGGTCTTATTTCTCTGCAAGTTGTACCAGATACTGAAATATGAGTAGCTCACCTGACCTAACTTGATTCGGGGTGACATCATTTGTCATGTCATCTCATGTCCATCCCTAAATATGATGTAAACGTTATATTGTAGAAATAGCAACATTCAACATATCT
Unaligned ( gi|29 ): CTAGATGTCCATAACCTACCCCTAGTGACCGTATGATTATTCATGCACAAGGGAGACGACTAAAGCTATGTTAAACGGTCTGTCATTTTTTCAAAGCTAAAATTCTTCATTTTTTTATATCTGTTTGGAGATGACTGGAATCTGCTAAAGACTTTTACTAAATTTGGGATGTCAT
Unaligned ( gi|32 ): GAGCCATCCAAAGGTGCAGCCCAATTTTCATTAGATGTGCTCCAGGTCTTATTTCTCTGTATTTTGTACCAGATACTAAAATACAATATAGCTCACCTTACCTTCCTTGGTTCGGGGTGTGACTTCATTTGTCATGT
Unaligned ( gi|33 ): CATGGTATTAGATATTTTTATGAAACATTGATCCAATGTCTGTCAAATGAGTTTGTTTTGAATAGATCGGGTCATATTTATGCCATCTGGGGTTAGCAGACGATCAGTTACTCTGCCCAC
Unaligned ( gi|35 ): GGAGTGTCATCAGCAATTTCAAATTGCAAACCGCAGTCTGGTAGATACCAGGCTTTCTCTGTGTATTCGGATCGACTGATGACTATTTGCAGATAAAAATCATT
Unaligned ( gi|36 ): TTTATTATCGTCATTGAATGCCTAAGAGACGATCAGTTAATATATCAGTATATATAGTTTATCAGTACTTAGGCACGCCAATCTAATCTAGTAACCGATAA
Unaligned ( gi|37 ): CCAATCTTCACAGAAAATGAGTAAAGCAGGGTTTCAAACTAACGACTCCTTAATTCAAACGCATTGCAGAATAAGCTTGCCGCGCCCTTCTGCAAAGT
Unaligned ( gi|39 ): TTACAAGGCATTTTCAGTTTGAATGTAATGTATTTTCATTTTCAAACCTTACTGATGCGAATCTTTAATATTATTTCTGACTTTTA
Unaligned ( gi|46 ): ACAGTCAGACGCACTACCAACTGAGCTATCTGGGTATGGCTTATTTAAGTTAG
Unaligned ( gi|47 ): AAATATTGATCGATTAAATATTTAGCGTCATTTTCATGC
Alignments
lowQualScore : 11111 111
lowQualScore : 1 1 2 2 4 888888888888 1 44444 1 1 1 2 33333 2 22 2 0 2 2 55555 2 4 4 22 22 333 2 6666666 2 22 2 2 22 44 55 22 4444 2 55555 0 1 333 222 22 0 1 1 333 1 1 1 1 333
lowQualScore : . . . . . ............ . ..... . . . . ..... . .. . . . . ..... . . . .. .. ... . ....... . .. . . .. .. .. .. .... . ..... . . ... ... .. . . . ... . . . . ...
lowQualScore : 0 2 0 0 0 888888888888 0 55555 8 8 2 0 99999 0 88 0 6 1 1 55555 1 4 4 99 88 555 0 5555555 0 88 0 0 88 55 00 22 5555 1 66666 1 5 777 222 88 8 9 8 222 7 7 7 7 555
consensus : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
Reference ( family-862 ) : GGTCTCACTNAACAATTACCTC-C-C-TTACG-T--------GACGGTAGCAAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CCAAGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--NTGTGTGAGACG
gi|10 : GGTCTCACTAAAAAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTCTTAC-----GCTCA-AGGAATAAGAGC-TGTTTAAAGTGGTTG-CGCA--A--CA-T--T-TTTGTTAAAAAA-TGC----ATAAAA-T-T-T--CATATGTCTTT--GTGT---GTA-TGGAAAC-------ACTGGAACATT-TGT--ATGATTTA-TG--CCAAGTTTGGATGACATTTGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAATGAGCGCAGTTGTCATTAATGAAAGGGTGCCATCAAACCATCGAAA-TGTGAAAAAG---CAACCGGGTCTTCCCAATGTTTTTTTT--TCTGTATAATTGGACCAACAGAGGACTAT-CTATTGGAACATGGCACTTTTAGAACCGC-T---TGTAA----------TGTTCCAGAAGTGCATTT-A-TCTATATTTAGAACAG-TACAAAATTCATTG--TTGTGTGAGAC
gi|11 : GGTTTCACTGAAGAATTGTCTC-C-C-TTACA-T--------GACAGTAGCAAGATTCTTAT-----GCCAA-AGAAATTAGAAAATGTGTAAAGCGGTTG-GGCA-----TT-T--T-TTTGTTAAAA-A-TGC----ATAAAT-T-G-T--CATATTTCTTT--GTGC---ATA-TGG-AAC-------ATTGGAACATT-TTC--ATGATTT-------------TGGGTGACATTGGG-AATTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAACTGTCAAAAATGAA----TGCCATCAAACCATCGAAATTGTGAAAT-G---CAACCTGGTCAACCCAATG--TTTTTT--TCTGCATAATTAGACCAACAGAGGATTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---AGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--TTGTGTGAGAC
gi|12 : GGTCTTACTTAAGAGTTACCTC-T-C-CTACA-T--------GAAGGTAGCAAGATTATTA------GCCCG-ATAAACTAGAGC-TATGAAAATTGGTTT-GGTAT-A--TT-T--T-TTT-----AA-A-TGC----TTTAAA-T-ACT--TATGCAT-TTT--CTAC---ATA-TGATAAG-------GATGGAACGTT-GCT--ATGGGTTG-TG--CCAAGTTTGGCTGACACTGGG-TGCTGTTTGA--TGAAGA-T----ATAACAGTTTGAAGAT-GCTTAGTGATACACTGCA-----AGAATTGAACAGAATTGTCAAAAATGAA-AGGTGTCCTCAAACCATGTATATTGTTAAAAAG---CAACCATATTAA--------------T--TATGTATATTTGGAGCAACAGATGGCGAT-CTATGGATACAAGATGATTTTAGAATCAT-C---AGTAATG-TGGTCAGTGTTCCAGAAGTGCATGT-C-TCTATATTTAGAACAG-TACAAAATTAATTG--TTGTTTAAGA
gi|13 : TCACTTACCAATTATCTC-C-T-CT------------------TAG------TATTGT-----GCACA-GGAAATTAGAGC-TGTGTAAATCGGTTG-GGCA--T--TA-T--T-CTTGTTGAAA-A-T------ATG------G-T--CACATTTCTTT--GTAC---ATA-TGAGAAC-------ATTGCAACATT-TTC--ACAAGTCC-TG--CCAAGTTTGGATGACCTTGGA-TACTGTTGGA--TGAAGC-T----ATAACAGTTTAAAGAT-GTGTAGTGATACACTGCA-----ACAAATGGGCATAAATGTCAAATATGAAGGGG-GTCATCAAACAATCGAAATTGTGAAAAAT---CAGTCTGGTCGAACCCATT--ATATTT--CCTGCATATTCGGACTACCAGAAGACTAT-ATATAGAAACAAGACACTTTTAGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAAAATGAACTG--GTGTTTGAGAC
gi|14 : aTCACTTAAGAATTACCTC-C-C-TTACA-T--------GACGGTGGCAAGATTCTTAC-----GTCCG-AGAAATTAAAGC-TGTTTAAAGCGGTTG-GGCA--AAATT-G--T-TTTGTTTAAA-C-TGC----ATAAAA-T-G-T--CATATTTCGTT--GTGT---ATA-TGGGAAC-------GTTGGAACATT-TTC--ATGATTTC-TG--CTAAGTCTGGA---CAATGAG-AACTGTTTGA--TGAAAC-------------------------GTAGTGATACACTGCA-----ACAAATGAGCAGAATTGTCAAAAATGAAGGGGTGTCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG----TTAT--TCTGCATAATTTGACCAACAGAGGACTAT-CTATGGGAACAAGGCACTTTTAGAACCAT-T---GGT-ATG-TATCCAGTGTTCCAGAAGTGCATTT-C-TCTATATGTAGAACAG-AACAAAATTAATTG--TTGTTCGAGAC
gi|15 : aGGTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--G--TT-T--T-TTTGTTAAAA-A-TAC----CTCAAA-T-G-T--CATATTGGTTT--GTGC---ATA-TGGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTCTGGGTGACACTGGG-AACTGTTTGT--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAAAACCAT-C---CATAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAAC
gi|16 : GTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAT-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GACA--G--TT-T--T-TTTGTTAAAA-A-TGC----CTAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAGCATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACACTGGG-AACTGTTTGA--TGATGG-T----ATAACAGTTTAAAGAT-GCATAGTGATACACTGCA-----ACAAACGGGCAGAATTGTCAAAAATGAAGGGATGCCATCAAACCATCGAAATTGTGAAAAAG---CAACTTGGTCAACCCGATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-C---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGCAGAACA
gi|17 : --CATATTTCTTT--GAAC---ATA-AGAAAAT-------ATTGGAACATT--------GG------G--CCAAAATTGGATGACAC------------------AAAGA-T----ATAAAAAAT-AAAGTTCACGGCGTGATACACTGCACAAAAAAAAATAGGCAGAGTTGTAAAAAATGAAGGGGTGTCGTCAAATCATTGACATTGTGAAATAG---CAATCCGTTCAAAACCATG--TTATTCCATC-ATATATTT--ACTAACAGAGGACAAT-CTATGG--ACCCGACACTTTTAGAACCAT-T---GGCAAAA-TGTTCAGTGTTCCAAAGGTGCATGT-C-TC--TATGTATCACGG-TACAAAAACAATTG--GTGCGTGAGATG
gi|18 : GGTAGCCAGAATGTTGC-----GCCCA-GGAAATTGAATC-TGAGTAAATTGGTTGTGGAA--A--CT-A--T-ATC-TTAAAA-G-TGCTTTAATAA-------T--CATATTATATT--CTAC---AGA-TGAGAACTGAGAATATTG-AACATG-GTC--ATAAG--CGTG--TCAAGGTTAGATGACACGGGG-TCCTGTTTGA--TGAAGA-T----ATAACAGTTTGATGAT-GCGTAGTGATATACTCCA-----A-AAATGACAAGAATTGTCAAAA---AACGCATA-CATCAAACAGTATAAATTGTGAAACAG---TA
gi|19 : atactaaagttctcactttgtTGCCATCAAACCATTGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTA--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATACGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGGTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATAAATGG--GTGAATAAGGCGttctatataatgctattatatatat
gi|2 : TCTCACTTACCACATACCTCAC-C-TTG-G-T--------GACTGTAGCGAAATTATTGC-----GTCCT-TGAAATTAGAGC-TGTGTAAATCGGTTA-GGCA-----TG-T--T-TTTGTTGAAA-A-TGC----TTGAAA-TTA-T--CATATTATTTT--GTACTTAATAATGTGAAC-------ACTGGCATATT-TTA--ATGAGTTC-TG--TCAAATTTG-ATGACATCGGG-TACTGTTTGA--TGAAGC-TGTATATAGCGGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAAAATTGTCAAAAATAAAGGGGTGTCATCAAACCATCGAACTTGTGAAAAA----TAACCTGGTCAACCTCATA---TTTTT--TCTGCTAACTTGGGCTCACAGAGGACTGT-TTATTGATATAAGATACTTTTAGAtataggcatgctatattgaaaaaatttgtatttagccattctaaaatttgacaaatcctgatatatttcctttatatatgagatatactgtgtaaatcagtcgtgctattca
gi|2 : CCAT-T---GGCAATG-TGTTCAGTTTTCCAGAAGTGCATGT-C-TCTATATATAGAACAG-TACAAAATTAATTG--GTGTGTGAGACttgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcccattggcaatgtgttcagttttccagaagtgcatgtctctatatatagaacagtacaaaattaattggtgtgtgagac
gi|21 : tctcacttaccacatacctcaccttggtgactgtagcgaaattattgcgtccttgaaattagagctgtgtaaatcggttaggcatgtttttgttgaaaatgcttgaaattatcatattattttgtacttaataatgtgaacactggcatattttaatgagttctgtcaaatttgatgacatcgggtactgtttgatgaagctgtatatagcggtttaaagatgcgtagtgatacactgcaacaaatgggcaaaattgtcaaaaataaaggggtgtcatcaaaccatcgaacttgtgaaaaataacctggtcaacctcatattttttctgctaacttgggctcacagaggactgtttattgatataagatacttttagattgactgaatatttagcgtcatttttatgccatcaaagtctaacagacgatcagttaacctaaccactgtttcctgggatcctgaaaggttaaccagtacatgagcacaccccatatctgcaagtaactaataactttcccgcttgaatcagcggtgagagacgaatgataatgagacacaatgtcgtatatcaattatcacggagactgttgccaggcggggattcgaactaacggcccctgaattgttgtcaaacgcgtaaccgactgagcttatcgagcGTTTGGATGACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAATAT-GCGCAGTGATACACTGTA-----ACAAATGGGCAGAATTGTCAAAAATGAAAGGGTGCCATTAAACCATCGAAATTGTGAAAAAC---CAACCTGGTCAACCCAATG--TTTTTT--TATTCACAATTGGACCAGGAGAGTGCATT-CTATGGGAACAAGGCACTTTTAGAACCAT-C---GGTAATG-TATTCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAACATTAATTG--TTGTGTGA
gi|23 : TTGAA-TGAAGA-T----AAAACAGTTTAGCGAA-GCATAGTGATAAGCGGCA-----ACAAATGGGCAGAATGGTCAAAAATGAAGGGGTGTCATTAAACCATCGAAATTGTAAAAAAT---CCACCTGGTCAATCACATG---TTTTT--TCTGCTTTATTAGACTAAGAGATGACTCT-CTATGGAAACAAGACAAGCATAGAACCAT-T---GGCAATG-TCTTCAGTGTTCCAGAAAGGCATGT-C-TCTATATGTAGAACAG-TACAAAATTGATTG--GTGTGTGAGA
gi|24 : aataCTGAACAATTACCTC-C-C-TT-TGCT--------AATGGTAGGAAAATTCTTGCTACATGTATATAGAAAATAGAAC-TG
gi|24 : GGGACCTG-TTG--ATAAATTC-TG--CCAAATTTGGATGACGGTGGATGACTTTTAGATGTGAAGTAG----ATAA-ACTTCAAACAT-Gcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaagggacctgttgataaattctgccaaatttggatgacggtggatgacttttagatgtgaagtagataaacttcaaacatgta
gi|25 : ctgaacaattacctccctttgctaatggtaggaaaattcttgctacatgtatatagaaaatagaactgcattaaatttgtaaaaggagatagcttatattgatggtaccatattaattccatttcagtcttctggtgtcaattaaTCTCACTCACCGATTGCCTC-CTC-TTA-G-T--------GATGGAAGCA---TTTTTGC-----ACCCA-TGAAATTAAAGC-TGTGT-------------CA--A--TCAT--T-TCTGTTGAAA-A-TGC-----TGAAT-TTG-T--CGTATTTCTGT--GTAT---ATA-TGAAAGC-------ACTGGAACGTT-TTC--ATTAGTTC-TG--CCAAATTTGGATGACATTGGT--ACTATTTta
gi|27 : GTCTCACTTAAGAATTACCCC-T-C-TTACA-TTATAACATGACGGTAGCAAGGTTTTTAC-----GCCAA-AGAAGCTAGAGC-TGTGTAAAGCAGTTT-TGCA--ATTTT-T--T-TTTGTT-AAA-A-TAC----ATAAAA-T-G-T--CA------TTT--GTGC---ATA-TG---------------GGAACATT-TTT--ATTATTTC-TG--CTAAGTTTGGATGACATTGGG-AACTGTTTGtttcatcaaattggtttaataagcattgaactgtattaaatg
gi|28 : TTGT-----GCCCA-ATAAATTAGAGA-TGTGTAAATCTGTTG-TGC---A--TT-A--T-TCCGTg
gi|28 : gTG--TTTTTT--CCTGCATATATTGACAAACAGAGGAC-ATGCTATTGAAACAAATCATTTTTACAACCAT-T---TGCAATG-TGTTCAGTGTTCCAGAAGTGC----------ATATGTAGAACAG-TACAAAATTATTTG--GTGTgtgttttttcctgcatatattgacaaacagaggacatgctattgaaacaaatcatttttacaaccatttgcaatgtgttcagtgttccagaagtgcatatgtagaacagtacaaaattatttggtgttt
gi|30 : gttgtgcccaataaattagagatgtgtaaatctgttgtgcattattccgtgTCTCACTGAAAAATTACCTC-C-C-TTACA-T--------GATGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--T-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAAtt
gi|31 : G--TTTTTT--CCCGCATAATTAACCCAACAGAGGACAAT-CTAAGGGAACAATGCACCTTTAGAACCAT-T---GATAATG-TATCCAGTGATCAAGGAGCGCATGT-C-TTTATATACAGAACAG-TACAAAATTAATTGTTTTGTGCGAGA
gi|34 : GTCTCACTTACCAATTACCTT-G-CATTG-G-T--------GACGGTAGCAAGAGTATTGC-----GCCCA-AGAAATTAGAGC-TGTGTAATTCGGTTG-GGC------CT-TAGT-TTTGGTGAAA-A-GGC----TTAAAA-
gi|38 : CTGT-CTATGGAAACAAGACACTATTAGAACCAT-T---G----------------TTCCAGAAGTG-ATTTACGTCTATATGAAGAATAG-TACAAAATTAATTG--GAGTGTGA
gi|4 : GGTCTCACTGAACAATTACCTC-C-C-TTGCA-T--------GACGGTAGCGAGATTATTAC-----GCCCA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGTA--A--TT-T--T-TTTTTAAAAA-A-TGC----ATAAAA-T-G-T--CATATTTCTTT--GTGC---ATA-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCCAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG--TTTTTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTTTAGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGACGca
gi|40 : TTTTAGAAC-AT-TAATGGTATTGATTTTCAGTGATCTAGAATTGAATTT-C-TTTATAATCAGAACAG-TTCAAA
gi|41 : taaTTCTTT--GTAC---ATA-TGAGAAC-------ATCAGAACATT-TTC--ATGATTTC-TA--CCAAGTTTGGATGACATTGGA-TACTGTTTGttgttat
gi|42 : TCTCACTTACCAATTACCTC-C-C-CTTTG-T--------GACAGTAGCAAGTGTATTGT-----GCCCA-AGAAATAAAAGC-TGTATAA
gi|43 : AATG-TGTTCAATGTTCCGGAAGTGCATGT-C-TTTGTATGTATAACAG-TACAAAATAAGTTA--GTGTGTGAGACG
gi|44 : TGATCCAAAAGTGCATTT-C-TCTACATGCAGAACTGTTACAGAAATAA--G--TTATGTG
gi|45 : ATGTAGAACAG-TAAAAAATTAATTT--TTGTGTGAGGCG
gi|5 : gtttctatataagaaagGGTCTCACTGAACAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAC-----GTCAA-AGAAATAAGAGC-TGTGTAAAGCGGTTG-GGTA--A--TA-T--T-TTTTTTAAAA-AATGC----ATAAAA-T-G-TGTCATATTTCTTT--GTGC---ATT-TGGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--AAAAGTTTGGGTGACCCTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAATAT-GCGTAGTGATACACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGGGGTGCCATCAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCATG---TTTTT--TCTGCATATTTGGACCAACAGAGGACTCT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--GTGTGTGAGA
gi|6 : GTCTCACTTAAGAGTTACCTC-T-G-TTACA-T--------GACGGTAGCAGGATTCTTAT-----GCCCA-AGAAATTACAGC-TGTGTAAAGCGGTTG-GGCA--A--TT-T--G-TTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTCATTT--GTAC---ACA-TGGCAAC-------ATTGGAACATT-TTA--GAAATTTT-TG--TCAAGTTTGGATAACATTGGG-AACTGTTTGA--TGAAGC-T----ATAACAGTTTAAAGAT-GCATAGTGATAAACTGCA-----ACAAATGGGCAGAATTGTCAAAAATGAAGTGGTTGCATCACACCATGGAAATTGTGAAAAAG---CATCCTGGTCAACCTCATG--TATTTT--TCTGGATAGTTGGACTAACAGAGGACTAC-CTATGGTAATAAGGCACTTATCGAACCAT-T---GGTAATG-TATCCAGTATTCCAGAAGTACATGT-C-TCTATATGTAGAACAG-TACAATATTAATTG--TTGCGTGAGA
gi|7 : TCTCACTTAAGAATTACATC-C-C-TTATA-A--------GATGGCAGCAAGATTCTTGT-----GACCA-AGAAATTAGAGC-AGCGTAAATCTGTTG-GGCATTA--TT-T--T-TTTG---AAA-G-TGC----ATAAAAGT-G-T--CATATTTCTTT--GTAT---ATA-TATGAAC-------ACTGGAACATT-TTC--ATGATTTC-TGTGCCAGGTTAAGATGACATTGAG-AACTGTTTTA--TGAAGC-T----ATAACAGTTTTAAAAT-GTGTAGCGATACACTGCA-----ACAAATCGGCAGAATTGCCAAAAGTTTAGGGGTGTCATCAAACTATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA----TTTTTT--TCTAAATATTTGGAGTGACAGATGACTAT-TTATGGAAACAAGACATTTTTAGAACCAT-T---GGTAATG-TGTTAAGTGTTCCAGAAGTGCATTT-C-TCTATATATAGAAAAG-TGTAAAATTAATTG--TTTCGTGAGA
gi|8 : GGTCTCTATGAAGAATTACCTC-C-C-TTACA-T--------GACGGTAGCAAGATTATTAC-----GCCAA-AGAAATTAGAGC-TGTGTAAAGCGGTTG-GGCA--T--TT-T--TTTTTGTTAAAA-A-TGC----ATAAAA-T-G-T--CATATTCCTTT--ATGC---ATA-TTGGAAC-------ATTGGAACATT-TTC--ATGATTTC-TG--CAAAGTTTGGGTGACATTGGG-AACTGTTTGA--TGATGC-T----ATAACAGTTTAAAGAT-GCGTAGTGATACACTGCA-----ATAAATGGGCAGAATTGTCAAAAACGACGGGGTGTCATAAAACCATCGAAATTGTGAAAAAG---CAACCTGGTCAACCCCA------ATTT--TCTGCATATTTGGACCAACAGAGGACTAT-CTATGGGAATAAGGCACTTTTAGAACCAT-T---GGTAATG-TATCCAGTGTTCCAGAAGTGCATGT-C-TCTATATGAAGAACAG-TACAAAATTAATTG--GTATGTGAGAC
gi|9 : CTCACTTACCAATTGCCTC-C-CCTTAT--T--------GACGAAAGCAAGATTATTAC-----GTCCA-AGAAATTAGAGT-TGTGTTAATCGACTT-GGCA--------T--T-ATT-CTAAAA-A-TGC----GTAAAA-T-GGT--CATATCTATTTCTGTAC---ATA-TGGGAAC-------ATTGGAACATCCTTCTAATGAGTTC-TG--TCAAGTTTGTATGACATTGGG-TACTGTTAGA--TAAAGA-T----ATAATAGTTTAAAGAT-ACGTTGTGATACACTGTA-----ATAAATGAGCA---------AAAATGAATGGGTATAATCAAAACATCAAAATTGTGAAAAAAAAACAATCTGGTTAACCCCATG--TGGTGT--ACTGCATATTTAGACTTGCAGGGGACAAC-ATATGGAAACAGGACACTTTTACAACCATAT---GA-AATG-TGTTCAATGTTCCAGAAGTGCATGT-C-TCTATATGTAGAACAG-TACAAAATTAATTG--ATGTATGAGAC
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|1 ): TATAAATCAGACCCATGGGCCTTAACGGACACCTGATTATCCAAAAAAACAGTCACATAAGTCTATTCAGTCATAAGAAATAATTTTTTTGTCAATTTCTCTTAAGAGATTCAGTAAAGTAGGCCCCACCCCCAGGACCAAACCGTGAGACCCCAGGGACATGCAATTCACAATTTTTATAAAAGACCGATATACGTCCATAATCATGCTCACCATTTGTTTCCCAGTGCTTCCTATATTGAGAAGACGATTTTTCAAATTTTTTGGGGGGGGGACGGATGGGGACCATGCAATGCACAATTTTGATTCACCCTTATGTACCAAAGCGGCATTTCATTACGACTGAGTTTAGTTTTTGAGAAGGAGTCGAAAATGTCAATTGTTTACGGACGCACGACGACTGACAAATGCGATCGCAAAAGGTCATTTGAGACAAAGTCTCTGGTTACCTAAAATCTAATCTAATATTCTAAGTAAAACAAATACAATACATTTTCAAGCAAATACCAAAAATATTTCATCAAATTCGAGCTTTATAAACCCTTTAGTAAAATTTTTATAAATATTGATTGATTGAATATCTAGCGTCATTTTTATGCCATCGAGGGCTAACAGACGATCAGTTAACCTAACCACTGTTTCCTGGAATTTACCAGTACTCGAGCACACCCCATCTCTGCAAGTAACTGATAACTTTCCCACTTGAATCAGCGGTGAGAGACGAATGATAATGAGACACAATGTCGTATATCAATCAAGCCGGGCAGGGATTTGAACTCAGGACCCCTGGACTGACAGTCAGACGCGTAACCAACTGAGCTATTTGGGCCTGGCTTCTATGAATTAAAGGGGCATCAGCCTAAAACTGACTTATTCCACTTGTACATATTAAAATAGACTTATTCCCCTT
Unaligned ( gi|3 ): GTTCATCAGTACTAGAGCACATGTATCGCTTTACCACTTAAATCAGCAATGAGAGACAAATAACAATGACAAGCAATCATCATGTAGGCTGGACAAACGGGGATTCATAATCATGACCCTTAGCTTGATAGTCAGACCGAGCCAACCAAACTCTAATGGTGTAGCTGTTTCTCATTAGAAGTGTCTGATTTCTCTACATGTACCAGATACTAAAATATGAGTAGCTCACCTTCTTTCAACATCCTAGATTCTGGGTTGTGTAGCTTCATTTTTCTTGTCCATCTCATGTCCATCCCTAAATATATGATATAAACATTACAGTGTAAAAATAACAATTAACATATTTGTACTGACTACCATGGAGATGCATTACACAGAATAACAACATTTAACATGTTGCATTATAATCGAGGTAAAACTCCTGTTGGTTTGATTTATTTTGGATAATTTGGGTCATTTTTTGCCATCAAGTTCTTACCTAACCTCTCTTTTCTGGATACTTAAAGGTTAACAAGTATTTGAGCACACCTGTCACTTTCCCACATGAATCAGCAATGGGAGATGAATAACGACACGTAATGTTGAATATCAATCATCAAGGAGATTGGACTTACATCCTTGGATTGACAGTTGGACTGAGCCAAACAAACTCTAATGATGTAGCTCATTAGAAGTGTTCCTGGCCCAA
Unaligned ( gi|20 ): TATGGAGACGACCTAAATGGGTCCATAATCATGCTCACCATTTGTTTTACCACTGCTTCCTTTACCTTGGATTTGAGTGTTTTGGTCCTGCTCCTAAGGGGGGTGGGGACAATGTAATTCACAATTTTGATTCGACCGTAGGTACAAAAGCTGCATCCAAAATTAAATGACGATTGAGCTAACAGTTTTTGAGAAAAAGTAACAATGTGAATTGTTAATGGACACACGACGTCAGACAAAATACAATCACAAAAGGTCACTTTTAGACAAAGTCTCAGGTGACCAAATTAATC
Unaligned ( gi|22 ): AATACAGACAGATGATCAGTTAATCTTAATCTTATCTTGACAAACGGAGATTCATAATCATGACCCTTGGATTAGTCAGACCAAGACACCAAACTGATTTCTCTGCATGTTTTACCAGATACTATAATACTAGTAGCTCACCTTCCTTGATTCCTGTTTGTGTCGCTTCATTTCTCATGTTCAACATGTCCGTCCCTAAATATATGATATAAAAATTATATTGTAGGAATAACATTCAACATATTTGTACAAACTTGTTTACGCATTATACAGAATAGCAAC
Unaligned ( gi|26 ): CAAGCCAACCAAATTCTAATGGTGTAGCCAATTTCTCATTAGAAGTATTCCAGGTCTTATTTCTCTGCAAGTTGTACCAGATACTGAAATATGAGTAGCTCACCTGACCTAACTTGATTCGGGGTGACATCATTTGTCATGTCATCTCATGTCCATCCCTAAATATGATGTAAACGTTATATTGTAGAAATAGCAACATTCAACATATCT
Unaligned ( gi|29 ): CTAGATGTCCATAACCTACCCCTAGTGACCGTATGATTATTCATGCACAAGGGAGACGACTAAAGCTATGTTAAACGGTCTGTCATTTTTTCAAAGCTAAAATTCTTCATTTTTTTATATCTGTTTGGAGATGACTGGAATCTGCTAAAGACTTTTACTAAATTTGGGATGTCAT
Unaligned ( gi|32 ): GAGCCATCCAAAGGTGCAGCCCAATTTTCATTAGATGTGCTCCAGGTCTTATTTCTCTGTATTTTGTACCAGATACTAAAATACAATATAGCTCACCTTACCTTCCTTGGTTCGGGGTGTGACTTCATTTGTCATGT
Unaligned ( gi|33 ): CATGGTATTAGATATTTTTATGAAACATTGATCCAATGTCTGTCAAATGAGTTTGTTTTGAATAGATCGGGTCATATTTATGCCATCTGGGGTTAGCAGACGATCAGTTACTCTGCCCAC
Unaligned ( gi|35 ): GGAGTGTCATCAGCAATTTCAAATTGCAAACCGCAGTCTGGTAGATACCAGGCTTTCTCTGTGTATTCGGATCGACTGATGACTATTTGCAGATAAAAATCATT
Unaligned ( gi|36 ): TTTATTATCGTCATTGAATGCCTAAGAGACGATCAGTTAATATATCAGTATATATAGTTTATCAGTACTTAGGCACGCCAATCTAATCTAGTAACCGATAA
Unaligned ( gi|37 ): CCAATCTTCACAGAAAATGAGTAAAGCAGGGTTTCAAACTAACGACTCCTTAATTCAAACGCATTGCAGAATAAGCTTGCCGCGCCCTTCTGCAAAGT
Unaligned ( gi|39 ): TTACAAGGCATTTTCAGTTTGAATGTAATGTATTTTCATTTTCAAACCTTACTGATGCGAATCTTTAATATTATTTCTGACTTTTA
Unaligned ( gi|46 ): ACAGTCAGACGCACTACCAACTGAGCTATCTGGGTATGGCTTATTTAAGTTAG
Unaligned ( gi|47 ): AAATATTGATCGATTAAATATTTAGCGTCATTTTCATGC