lowQualScore : 1 1
lowQualScore : 0 1 22 1 3333 7 2 5 2
lowQualScore : . . .. . .... . . . .
lowQualScore : 4 7 33 7 5555 8 2 1 2
consensus : AAAAAAACATACTATTTTGA-GGGG--G-GAAT----GGGGCCGAATTTCGCCGAATAT-TTGGGGTAA-AAAA
Reference ( gi|24 ) : AAAAAAACATACTATTTTGA-GGGG--G-GAAT----GGGGCCGAATTTCGCGGAATAT-TTGGTGTAA-AAAA
gi|20 : AAAAAAACATCCAATTTTGA-GAGG--G-GAAT----GAGGCCAAATTTCACTTAATATATTGG-GTAA-AAAA
gi|13 : ggAAAAAAAT-TACTACTTTGA-GGGG--G-GAAT----GGGGTCCAATTTTGCac
gi|14 : tttctgacattaggcggggAAAAAAGCATTTTATTTTGA-GGGA--G-TAAT----GGGGCC----------AAATAT-TTGGGGTAA-AAAAcaaaaatgcaaaatttga
gi|5 : ttttttgacattagggggAAAAAAACATCATGTTTTTA-GGAG--GTAAAT----GGGGCCGTATTTCaaca
gi|23 : taattttttcttacattggggAAAAAACATTCTATATTGA-GGGG--G-GAAT----GGGGCTGAAAATCACCGAATAT-TTAGTGTAA-AAAAagacctaaaactgaccaaagagaaacactgcaaatgaata
gi|16 : gAAATAATATATAATTTTGA-AGAG--A-GAAT----GGGGCTGAATTTCACCAAATAT-TTGGGATGA-AAAAa
gi|15 : attaggtggAAAAACATACTATTTTGA-GGGG--G-GGAT----GGGACCAAATTTTGC-GAATAT-TTGAGGTAA-AAAAaaac
gi|19 : tgtgacatcagagggAAAAACATACTATTTTGATGGAG--G-GAATCATAGGGGCCGAAATTTGCCGAATAT-TTGGGTTAA-AAAA
gi|29 : acAAAAACA-ACTATTTTGA-GGGG--G-GAAT----GAGG----ATTTCGCCGAATAT-TTTGGGTGA-a
gi|27 : AAAAACAAACTATTTTGA-GGGG--G-GAAT----GGGGTCGAA
gi|3 : agggggAAAAACATGTT-TTCTG--GAGG--G-GAAC----GGGGCTGAAacattgacatttg
gi|22 : aatggaaattttttccttacactagggggAAAACATACTATTTTGA--GGG--G-GAAT----GGGGCCGAACTTcactcaaaaaaggaaagtaaaaacactgcatgtgcaaatagcaccaaaggaagctaggatattttttgttgatattt
gi|21 : aatttttctcacattagggggggggAAAACA--CTATTTTGA-GGGG--A-GAAT----GGGACCAAATGTCTC-CAATAT-TTAGGGTAA-AAgaaaaa
gi|17 : tgggagatAAACAT--T-TTTTGA-TGGG--G-GAAT----GGGGCCGAATTTCGCCGAATAT-TTGGGGTAA-AAAAcaaa
gi|11 : acattgggggggAACATACTATTTTGA-GCGG--G-AGAT----GGGACTGAATTTCGTCATATAT-TTGTGGTAA-AAAAgc
gi|7 : tcaattttgatgggaatttttctACATACTGTTTTGA-GGAGTGG-GGAT----GGG-CCGAATTTCGCCAAATAT-TTGGGGTAA-AAAAc
gi|25 : tttctgacattgggcatttgggagggggtgggggATACTATTTTAA-GGGG--T-GAAT----GGGGCCGAaa
gi|28 : tttttttctgacatggggtaggggggggTACTATTTTGA-GGTG--G-GAAT----GAGGCCTAATTTCACCGAATAT-TTGGGGTAA-AAA
gi|26 : TAATATT---A-GGGA--G-GAAT----GGGAACAATCTTCGCCGAATAT-TTGGGGTAA-AAAAc
gi|9 : tcACTGTTTTGA-AGGG--G-GAAT----GGGGCTGAATTTTGCCTAAAAT-TTGGGGTAA-AAAca
gi|33 : ttctgacattaggggggcggggtaggggggaA-AGGG--G-GAAT----GGGGCCGAATTTCGCCGAATAA-TTGGGGTAA-AAAAtaaac
gi|18 : aA-AGGG--A-GAAT----GGGGCCGATTTTCGCCGAATAT-TTGGGGTAA-AAGA
gi|31 : ttctgacattagggggagaaaaagtt-GGAG--G-AAAT----GGGGTCGAATTTCGCTGAATAT-TTGGGGTAA-AAAA
gi|32 : GGG--G-GAAT----CCGGCCGAATTTCGCCGAGTAT-TTAGGGTAATAAAAacaac
8 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|1 ): GTTATTTCTTTAATTTTGAGAGGATTTTTTTTTTATATTAGGGGATATAACATAATTTAGGGAAAATAATAGATGAGGAGAATGGGGCTCAACTTCAGCCCCAAAAAGAGGGGAAAAACTTGACTGCTATAGTGTAAATCATAAAATAAAGTATATAC
Unaligned ( gi|2 ): AATTTTTTTCTTACATTATGGGAAAAGAACATAATTATGTATTTAGGAGGCGAATGGGGATGAAGTTCAGCCCCCAAAAAGGGTGGTGGGGTGGGGAACACTGACTGATACATTATAAGTAGAAAAGAGAAGTTATGCCTTTTGTCTGTATATTT
Unaligned ( gi|4 ): TTTTTTTCCATAGTTTACCAGTAGGGGGAAAAAAACATGTTTTTGTTTTGTGAGATGAATTGGGCCTAACTTTGGCCACAAAGACAACCATATCAACACTGAATGC
Unaligned ( gi|6 ): TGTATATTTTTTGTAATTTTGAGTAGAATTTTATTTTACATTAGGGATAAACTATAAATTTTAGAAGGGGATGAGGCTTTAAATTTGGCCCAAAAAAGAGGGGG
Unaligned ( gi|8 ): GCAGAATTGTTTTTTGACATTAGGGATAAAAACGTTTTGGTGAGGGGAATGGGACCAAACTTTGAACCCCAAAAAGGTGAGAAAAAACAACA
Unaligned ( gi|10 ): TTTGCTAACATTCTAAGGGGAAAAAGAATTTTTTTTTTATGGAAATGGGGCCGAACTTCGGTCCAAAAATTGGAGAAAAAAAAA
Unaligned ( gi|12 ): GGGAAATTATCTTACATTAGGGGAAAAATATGTTTTTGTTAGGGGAATTGGGCCAAAGTTCAGCCCCCAAAAAGAAAAAAA
Unaligned ( gi|30 ): TTTTAGGAAGGGAATGGGGCCAGACTTTGACCCTAAAAAAAGAAAAAAAACAAC
Alignments
lowQualScore : 1 333 1 22 1 3333 1 22 2
lowQualScore : . ... . .. . .... . .. .
lowQualScore : 8 222 6 00 5 1111 7 55 0
consensus : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
Reference ( family-838 ) : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
gi|10 : G--G-AAAT----GGGGCCGAACTTC-GGTCCAAA-AATTGGAGAAA-AAAA
gi|11 : tttgctaacattctaaggggaaaaagaattttttttttatAACATA-CTAT---TTTGA-GCGG--G-AGAT----GGGACTGAATTTC-G--TCATATATTTGTGGTAA-AAAAaa
gi|13 : tcaattttgatgggaatttttctAAAAAAAT-TA-CTAC---TTTGA-GGGG--G-GAAT----GGGGTCCAATTTT-G--CCAAAAATc
gi|14 : tttctgacattaggcggggAAAAAAGCATT-TTAT---TTTGA-GGGA--G-TAAT----GGG-----------G--CCAAATATTTGGGGTAA-AAAAgcaaaatttga
gi|15 : ttttttgacattagggggAAAAACATA-CTAT---TTTGA-GGGG--G-GGAT----GGGACCAAATTTT-G---CGAATATTTGAGGTAA-AAAAaaca
gi|16 : tgtgacatcagagggAAATAATATA-TAAT---TTTGA-AGAG--A-GAAT----GGGGCTGAATTTC-A--CCAAATATTTGGGATGA-AAAA
gi|17 : attaggtggAAACAT---T-T---TTTGA-TGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAAaaac
gi|18 : acattgggggggA-AGGG--A-GAAT----GGGGCCGATTTTC-G--CCGAATATTTGGGGTAA-AAGAgc
gi|19 : ttctgacattagggggagaaaaagttAAAAACATA-CTAT---TTTGATGGAG--G-GAATCATAGGGGCCGAAATTT-G--CCGAATATTTGGGTTAA-AAAA
gi|2 : acAAAAGAACATAATTATGTATTTAG-GAGG--C-GAAT----GGGGATGAAGTTCAG--CCa
gi|20 : aatttttttcttacattatgggAAAAAAACATC-CAAT---TTTGA-GAGG--G-GAAT----GAGGCCAAATTTC-A--CTTAATATATTGGGTAA-AAAAcccaaaaagggtggtggggtggggaacactgactgatacattataagtagaaaagagaagttatgccttttgtctgtatattt
gi|21 : ggAAAACA---CTAT---TTTGA-GGGG--A-GAAT----GGGACCAAATGTC-T--CC-AATATTTAGGGTAA-AAac
gi|22 : tgggagatAAAACATA-CTAT---TTTGA--GGG--G-GAAT----GGGGCCGAACTTcaaa
gi|23 : aatttttctcacattagggggggggAAAAAACATT-CTAT---ATTGA-GGGG--G-GAAT----GGGGCTGAAAATC-A--CCGAATATTTAGTGTAA-AAAAgaaaaa
gi|24 : gAAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CGGAATATTTGGTGTAA-AAAAa
gi|25 : ATA-CTAT---TTTAA-GGGG--T-GAAT----GGGGCCGA
gi|26 : tttttttctgacatggggtaggggggggTA-ATAT---T---A-GGGA--G-GAAT----GGGAACAATCTTC-G--CCGAATATTTGGGGTAA-AAAA
gi|27 : tcAAAAACAAA-CTAT---TTTGA-GGGG--G-GAAT----GGGGTCGAAca
gi|28 : agggggTA-CTAT---TTTGA-GGTG--G-GAAT----GAGGCCTAATTTC-A--CCGAATATTTGGGGTAA-AAAacattgacatttg
gi|29 : AAAAACA-A-CTAT---TTTGA-GGGG--G-GAAT----GAGG----ATTTC-G--CCGAATATTTTGGGTGA-c
gi|3 : AAAAACATG-TT-T---TCTG--GAGG--G-GAAC----GGGGCTGAA
gi|31 : aatggaaattttttccttacactaggggg-GGAG--G-AAAT----GGGGTCGAATTTC-G--CTGAATATTTGGGGTAA-AAAAcactcaaaaaaggaaagtaaaaacactgcatgtgcaaatagcaccaaaggaagctaggatattttttgttgatattt
gi|32 : GGG--G-GAAT----CCGGCCGAATTTC-G--CCGAGTATTTAGGGTAATAAAAacaac
gi|33 : A-AGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATAATTGGGGTAA-AAAAca
gi|5 : aAAAAAAACATC-ATGT---TTTTA-GGAG--GTAAAT----GGGGCCGTATTTC-
gi|7 : taattttttcttacattggggACATA-CTGT---TTTGA-GGAGTGG-GGAT----GGG-CCGAATTTC-G--CCAAATATTTGGGGTAA-AAAAagacctaaaactgaccaaagagaaacactgcaaatgaata
gi|9 : tttctgacattgggcatttgggagggggtgggggA-CTGT---TTTGA-AGGG--G-GAAT----GGGGCTGAATTTT-G--CCTAAAATTTGGGGTAA-AAAaa
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|1 ): GTTATTTCTTTAATTTTGAGAGGATTTTTTTTTTATATTAGGGGATATAACATAATTTAGGGAAAATAATAGATGAGGAGAATGGGGCTCAACTTCAGCCCCAAAAAGAGGGGAAAAACTTGACTGCTATAGTGTAAATCATAAAATAAAGTATATAC
Unaligned ( gi|4 ): TTTTTTTCCATAGTTTACCAGTAGGGGGAAAAAAACATGTTTTTGTTTTGTGAGATGAATTGGGCCTAACTTTGGCCACAAAGACAACCATATCAACACTGAATGC
Unaligned ( gi|6 ): TGTATATTTTTTGTAATTTTGAGTAGAATTTTATTTTACATTAGGGATAAACTATAAATTTTAGAAGGGGATGAGGCTTTAAATTTGGCCCAAAAAAGAGGGGG
Unaligned ( gi|8 ): GCAGAATTGTTTTTTGACATTAGGGATAAAAACGTTTTGGTGAGGGGAATGGGACCAAACTTTGAACCCCAAAAAGGTGAGAAAAAACAACA
Unaligned ( gi|12 ): GGGAAATTATCTTACATTAGGGGAAAAATATGTTTTTGTTAGGGGAATTGGGCCAAAGTTCAGCCCCCAAAAAGAAAAAAA
Unaligned ( gi|30 ): TTTTAGGAAGGGAATGGGGCCAGACTTTGACCCTAAAAAAAGAAAAAAAACAAC
Alignments
lowQualScore : 1 333 1 22 1 3333 1 22 2
lowQualScore : . ... . .. . .... . .. .
lowQualScore : 8 222 6 00 5 1111 7 55 0
consensus : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
Reference ( family-838 ) : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
gi|10 : G--G-AAAT----GGGGCCGAACTTC-GGTCCAAA-AATTGGAGAAA-AAAA
gi|11 : tttgctaacattctaaggggaaaaagaattttttttttatAACATA-CTAT---TTTGA-GCGG--G-AGAT----GGGACTGAATTTC-G--TCATATATTTGTGGTAA-AAAAaa
gi|13 : tcaattttgatgggaatttttctAAAAAAAT-TA-CTAC---TTTGA-GGGG--G-GAAT----GGGGTCCAATTTT-G--CCAAAAATc
gi|14 : tttctgacattaggcggggAAAAAAGCATT-TTAT---TTTGA-GGGA--G-TAAT----GGG-----------G--CCAAATATTTGGGGTAA-AAAAgcaaaatttga
gi|15 : ttttttgacattagggggAAAAACATA-CTAT---TTTGA-GGGG--G-GGAT----GGGACCAAATTTT-G---CGAATATTTGAGGTAA-AAAAaaca
gi|16 : tgtgacatcagagggAAATAATATA-TAAT---TTTGA-AGAG--A-GAAT----GGGGCTGAATTTC-A--CCAAATATTTGGGATGA-AAAA
gi|17 : attaggtggAAACAT---T-T---TTTGA-TGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAAaaac
gi|18 : acattgggggggA-AGGG--A-GAAT----GGGGCCGATTTTC-G--CCGAATATTTGGGGTAA-AAGAgc
gi|19 : ttctgacattagggggagaaaaagttAAAAACATA-CTAT---TTTGATGGAG--G-GAATCATAGGGGCCGAAATTT-G--CCGAATATTTGGGTTAA-AAAA
gi|2 : acAAAAGAACATAATTATGTATTTAG-GAGG--C-GAAT----GGGGATGAAGTTCAG--CCa
gi|20 : aatttttttcttacattatgggAAAAAAACATC-CAAT---TTTGA-GAGG--G-GAAT----GAGGCCAAATTTC-A--CTTAATATATTGGGTAA-AAAAcccaaaaagggtggtggggtggggaacactgactgatacattataagtagaaaagagaagttatgccttttgtctgtatattt
gi|21 : ggAAAACA---CTAT---TTTGA-GGGG--A-GAAT----GGGACCAAATGTC-T--CC-AATATTTAGGGTAA-AAac
gi|22 : tgggagatAAAACATA-CTAT---TTTGA--GGG--G-GAAT----GGGGCCGAACTTcaaa
gi|23 : aatttttctcacattagggggggggAAAAAACATT-CTAT---ATTGA-GGGG--G-GAAT----GGGGCTGAAAATC-A--CCGAATATTTAGTGTAA-AAAAgaaaaa
gi|24 : gAAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CGGAATATTTGGTGTAA-AAAAa
gi|25 : ATA-CTAT---TTTAA-GGGG--T-GAAT----GGGGCCGA
gi|26 : tttttttctgacatggggtaggggggggTA-ATAT---T---A-GGGA--G-GAAT----GGGAACAATCTTC-G--CCGAATATTTGGGGTAA-AAAA
gi|27 : tcAAAAACAAA-CTAT---TTTGA-GGGG--G-GAAT----GGGGTCGAAca
gi|28 : agggggTA-CTAT---TTTGA-GGTG--G-GAAT----GAGGCCTAATTTC-A--CCGAATATTTGGGGTAA-AAAacattgacatttg
gi|29 : AAAAACA-A-CTAT---TTTGA-GGGG--G-GAAT----GAGG----ATTTC-G--CCGAATATTTTGGGTGA-c
gi|3 : AAAAACATG-TT-T---TCTG--GAGG--G-GAAC----GGGGCTGAA
gi|31 : aatggaaattttttccttacactaggggg-GGAG--G-AAAT----GGGGTCGAATTTC-G--CTGAATATTTGGGGTAA-AAAAcactcaaaaaaggaaagtaaaaacactgcatgtgcaaatagcaccaaaggaagctaggatattttttgttgatattt
gi|32 : GGG--G-GAAT----CCGGCCGAATTTC-G--CCGAGTATTTAGGGTAATAAAAacaac
gi|33 : A-AGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATAATTGGGGTAA-AAAAca
gi|5 : aAAAAAAACATC-ATGT---TTTTA-GGAG--GTAAAT----GGGGCCGTATTTC-
gi|7 : taattttttcttacattggggACATA-CTGT---TTTGA-GGAGTGG-GGAT----GGG-CCGAATTTC-G--CCAAATATTTGGGGTAA-AAAAagacctaaaactgaccaaagagaaacactgcaaatgaata
gi|9 : tttctgacattgggcatttgggagggggtgggggA-CTGT---TTTGA-AGGG--G-GAAT----GGGGCTGAATTTT-G--CCTAAAATTTGGGGTAA-AAAaa
blockSeqs : A GTA T TG T CATA A . T
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blockSeqs : . . .
blockSeqCons : **
originalCons : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
finalCons : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|1 ): GTTATTTCTTTAATTTTGAGAGGATTTTTTTTTTATATTAGGGGATATAACATAATTTAGGGAAAATAATAGATGAGGAGAATGGGGCTCAACTTCAGCCCCAAAAAGAGGGGAAAAACTTGACTGCTATAGTGTAAATCATAAAATAAAGTATATAC
Unaligned ( gi|4 ): TTTTTTTCCATAGTTTACCAGTAGGGGGAAAAAAACATGTTTTTGTTTTGTGAGATGAATTGGGCCTAACTTTGGCCACAAAGACAACCATATCAACACTGAATGC
Unaligned ( gi|6 ): TGTATATTTTTTGTAATTTTGAGTAGAATTTTATTTTACATTAGGGATAAACTATAAATTTTAGAAGGGGATGAGGCTTTAAATTTGGCCCAAAAAAGAGGGGG
Unaligned ( gi|8 ): GCAGAATTGTTTTTTGACATTAGGGATAAAAACGTTTTGGTGAGGGGAATGGGACCAAACTTTGAACCCCAAAAAGGTGAGAAAAAACAACA
Unaligned ( gi|12 ): GGGAAATTATCTTACATTAGGGGAAAAATATGTTTTTGTTAGGGGAATTGGGCCAAAGTTCAGCCCCCAAAAAGAAAAAAA
Unaligned ( gi|30 ): TTTTAGGAAGGGAATGGGGCCAGACTTTGACCCTAAAAAAAGAAAAAAAACAAC
Alignments
lowQualScore : 1 333 1 22 1 3333 1 22 2
lowQualScore : . ... . .. . .... . .. .
lowQualScore : 8 222 6 00 5 1111 7 55 0
consensus : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
Reference ( family-838 ) : AAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAA
gi|10 : G--G-AAAT----GGGGCCGAACTTC-GGTCCAAA-AATTGGAGAAA-AAAA
gi|11 : tttgctaacattctaaggggaaaaagaattttttttttatAACATA-CTAT---TTTGA-GCGG--G-AGAT----GGGACTGAATTTC-G--TCATATATTTGTGGTAA-AAAAaa
gi|13 : tcaattttgatgggaatttttctAAAAAAAT-TA-CTAC---TTTGA-GGGG--G-GAAT----GGGGTCCAATTTT-G--CCAAAAATc
gi|14 : tttctgacattaggcggggAAAAAAGCATT-TTAT---TTTGA-GGGA--G-TAAT----GGG-----------G--CCAAATATTTGGGGTAA-AAAAgcaaaatttga
gi|15 : ttttttgacattagggggAAAAACATA-CTAT---TTTGA-GGGG--G-GGAT----GGGACCAAATTTT-G---CGAATATTTGAGGTAA-AAAAaaca
gi|16 : tgtgacatcagagggAAATAATATA-TAAT---TTTGA-AGAG--A-GAAT----GGGGCTGAATTTC-A--CCAAATATTTGGGATGA-AAAA
gi|17 : attaggtggAAACAT---T-T---TTTGA-TGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATATTTGGGGTAA-AAAAaaac
gi|18 : acattgggggggA-AGGG--A-GAAT----GGGGCCGATTTTC-G--CCGAATATTTGGGGTAA-AAGAgc
gi|19 : ttctgacattagggggagaaaaagttAAAAACATA-CTAT---TTTGATGGAG--G-GAATCATAGGGGCCGAAATTT-G--CCGAATATTTGGGTTAA-AAAA
gi|2 : acAAAAGAACATAATTATGTATTTAG-GAGG--C-GAAT----GGGGATGAAGTTCAG--CCa
gi|20 : aatttttttcttacattatgggAAAAAAACATC-CAAT---TTTGA-GAGG--G-GAAT----GAGGCCAAATTTC-A--CTTAATATATTGGGTAA-AAAAcccaaaaagggtggtggggtggggaacactgactgatacattataagtagaaaagagaagttatgccttttgtctgtatattt
gi|21 : ggAAAACA---CTAT---TTTGA-GGGG--A-GAAT----GGGACCAAATGTC-T--CC-AATATTTAGGGTAA-AAac
gi|22 : tgggagatAAAACATA-CTAT---TTTGA--GGG--G-GAAT----GGGGCCGAACTTcaaa
gi|23 : aatttttctcacattagggggggggAAAAAACATT-CTAT---ATTGA-GGGG--G-GAAT----GGGGCTGAAAATC-A--CCGAATATTTAGTGTAA-AAAAgaaaaa
gi|24 : gAAAAAAACATA-CTAT---TTTGA-GGGG--G-GAAT----GGGGCCGAATTTC-G--CGGAATATTTGGTGTAA-AAAAa
gi|25 : ATA-CTAT---TTTAA-GGGG--T-GAAT----GGGGCCGA
gi|26 : tttttttctgacatggggtaggggggggTA-ATAT---T---A-GGGA--G-GAAT----GGGAACAATCTTC-G--CCGAATATTTGGGGTAA-AAAA
gi|27 : tcAAAAACAAA-CTAT---TTTGA-GGGG--G-GAAT----GGGGTCGAAca
gi|28 : agggggTA-CTAT---TTTGA-GGTG--G-GAAT----GAGGCCTAATTTC-A--CCGAATATTTGGGGTAA-AAAacattgacatttg
gi|29 : AAAAACA-A-CTAT---TTTGA-GGGG--G-GAAT----GAGG----ATTTC-G--CCGAATATTTTGGGTGA-c
gi|3 : AAAAACATG-TT-T---TCTG--GAGG--G-GAAC----GGGGCTGAA
gi|31 : aatggaaattttttccttacactaggggg-GGAG--G-AAAT----GGGGTCGAATTTC-G--CTGAATATTTGGGGTAA-AAAAcactcaaaaaaggaaagtaaaaacactgcatgtgcaaatagcaccaaaggaagctaggatattttttgttgatattt
gi|32 : GGG--G-GAAT----CCGGCCGAATTTC-G--CCGAGTATTTAGGGTAATAAAAacaac
gi|33 : A-AGGG--G-GAAT----GGGGCCGAATTTC-G--CCGAATAATTGGGGTAA-AAAAca
gi|5 : aAAAAAAACATC-ATGT---TTTTA-GGAG--GTAAAT----GGGGCCGTATTTC-
gi|7 : taattttttcttacattggggACATA-CTGT---TTTGA-GGAGTGG-GGAT----GGG-CCGAATTTC-G--CCAAATATTTGGGGTAA-AAAAagacctaaaactgaccaaagagaaacactgcaaatgaata
gi|9 : tttctgacattgggcatttgggagggggtgggggA-CTGT---TTTGA-AGGG--G-GAAT----GGGGCTGAATTTT-G--CCTAAAATTTGGGGTAA-AAAaa
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|1 ): GTTATTTCTTTAATTTTGAGAGGATTTTTTTTTTATATTAGGGGATATAACATAATTTAGGGAAAATAATAGATGAGGAGAATGGGGCTCAACTTCAGCCCCAAAAAGAGGGGAAAAACTTGACTGCTATAGTGTAAATCATAAAATAAAGTATATAC
Unaligned ( gi|4 ): TTTTTTTCCATAGTTTACCAGTAGGGGGAAAAAAACATGTTTTTGTTTTGTGAGATGAATTGGGCCTAACTTTGGCCACAAAGACAACCATATCAACACTGAATGC
Unaligned ( gi|6 ): TGTATATTTTTTGTAATTTTGAGTAGAATTTTATTTTACATTAGGGATAAACTATAAATTTTAGAAGGGGATGAGGCTTTAAATTTGGCCCAAAAAAGAGGGGG
Unaligned ( gi|8 ): GCAGAATTGTTTTTTGACATTAGGGATAAAAACGTTTTGGTGAGGGGAATGGGACCAAACTTTGAACCCCAAAAAGGTGAGAAAAAACAACA
Unaligned ( gi|12 ): GGGAAATTATCTTACATTAGGGGAAAAATATGTTTTTGTTAGGGGAATTGGGCCAAAGTTCAGCCCCCAAAAAGAAAAAAA
Unaligned ( gi|30 ): TTTTAGGAAGGGAATGGGGCCAGACTTTGACCCTAAAAAAAGAAAAAAAACAAC