lowQualScore : 11111111
lowQualScore : 33333333333333 1 1 1 2222 2222222 222 1111111111111 1111111111111 333 1 11 111111111 111111111111111 222222222222222222 222222 444444444444444444444 1111111111 1 11111111111111 333333333333 11111111111 33333333
lowQualScore : 55 3 0 44 2 22222222222222 555 44 6 888 555 6 44 77777 1 3 0 3 3 4 6 3 2 6 6 2 99999999 0000 8888888 33 4 777 6 3 6666666666666 6666666666666 77777 666 5 77777 77 555 44 6666 5555 0 222222222 3 44 888888888888888 555 5 222222222222222222 000000 1 55555 4 3 4 55555 2 6 444444444444444444444 2222222222 5 3 6 66 2 555 3 66666666666666 2 4 2 222222222222 66666 22222222222 444 2 2 66666666 3 6 4 6 2
lowQualScore : .. . . .. . .............. ... .. . ... ... . .. ..... . . . . . . . . . . . . ........ .... ....... .. . ... . . ............. ............. ..... ... . ..... .. ... .. .... .... . ......... . .. ............... ... . .................. ...... . ..... . . . ..... . . ..................... .......... . . . .. . ... . .............. . . . ............ ..... ........... ... . . ........ . . . . .
lowQualScore : 00 1 5 22 5 77777777777777 444 22 2 555 444 8 22 77777 6 1 5 1 0 8 3 3 9 6 6 4 33333333 5555 6666666 77 7 333 1 1 9999999999999 9999999999999 77777 555 5 77777 88 444 22 5555 5555 4 333333333 1 22 888888888888888 444 2 777777777777777777 333333 5 66666 4 0 8 66666 7 6 666666666666666666666 5555555555 2 6 0 88 9 000 2 88888888888888 9 5 7 222222222222 77777 77777777777 777 7 7 77777777 9 0 5 8 9
consensus : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCA--AGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCG--AATTGTCGGCATG-----GACATT-TCATTTTTCTTGTG-TTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGAGGCATTGTTATCCGTTTATTACTAC---CAT-GTGCT---TTGGATA-------CATTGGGTTTC--CCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATC-----GGC-AATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTAT----GC---AATTGTT---------T-GT--T-------T-------AG---ACG------------------ACAACACACCGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCA------TGCT-----GCGCTGCA-CAATACTGCTGGGAAACAG-----ATTTG-TCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAAC-ACA-----------------GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAA-A---CTCTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC-TGTGCGAACCTT
Reference ( gi|2 ) : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCA--AATACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATTTTGTGCTCATTTGCG--AATTGTCGGCATG-----GAAATT-TCATTTTTCTTGTG-TTTCTTGCTCTTTTTGTGC-GACTTCAGGGCTGAATA-CATACTTTTTCCGAGGCATTGTTATCCGTGTATTACTAC---CGT-ATGCA---TTGGATA-------CATTGGGTTTC--CCCAAATGACGTCAATTGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATC-----GGC-TCTTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATTTACTGCGTT---AA--GTTTAT----GC---AATTGTT---------T-GT--T-------T-------AG---ATG------------------ACAACACACCGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCA------TGCT-----GCACTGCA-CAATACTGCTGGGAAACAG-----ATTTG-TCAAATTGAGTAGTCTCCCTTCTCTTACATATAGTAAAAC-CGA-----------------GA----------GTAAAATAAATGGCGAAGTTGGACATTTCATATTCTCTGTTATTG--TTTTTTAAATTCAA-A---CTCTTTT--------------AAATTCAAGCAC-TTTTCAATAA-TTTTTGTTCATTTT-A----------AA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAAGTACAATGTAAACACTCCTCATTTGAGAAGTTGAAAATCAAGCACTTTTTAAATC-TGTGCGAACCTT
gi|6 : ATTA--TTTTTTT--ACAACATCAGTTAGTTTCACACAGC-A--AGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TTTTTACCAATTTCTTTCTACTACACAAGTTT---ATCCTGTGCTCATTTGCG--AATTGTCGGCAGG-----GACATT-TCATTTTTCTTGTG-TTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCAAGGCATTGTTATCTGTTTATTACGAC---CAT-GTGCT---TTGGATA-------CATTGGGTTTC--CTCATATGACGTCACTAGTTCAAGACACAAGCAGCTGTTAAATTGCATTTTGTTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTCTC-----GGC-AATTTTT-CTTCGCGGGTTAT-----GGGAGAATTATTTATTAACTGCGTT---AA--GTTTGT----GC---AATTGTT---------T-GT--T-------T-------AG---A---------------------CAACACACCGTTTCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCGGCA------TGCT-----GCACTGCA-CAATACTGCTGGAAAACAG-----ATTTG-TCAAATTGAGTAGTCTTCCTTCTCTTGCATATAGTAAAAC-ACA-----------------GA----------GTAAAATAAATTGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAA-A---CTCTTTT--------------AAATTCAAGCAC-TTTTCAATGT-TTTGTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---GACATTAAAAAAT-AAGCACTATTCAG--------TTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACATTTCAAATC-TGTGCGAAC
gi|3 : ATTA--TTTTTTTT-ACACCTTCAGTTAGTTTCACACAGCCA--AGTACTCCCTCAGACCTTAATGT--------------CTT---TGCATC--CCATTTT-TTT--ACCTATGTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCG--AATTGTCAGCATG-----GACATT-TCATTTT-CTTATG-TTTCTTGCTCTATC-GTGC-GACTTCAGGGCTGAATA--ACACTTTCTCCGAGGCATTGTTATCCATTTATTACTAT---CAT-GTGCT---TTGGATA-------CATTGGGTTTC--CC-AGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GA-------------TATTATC-----GGC-AATTTTT-CTGCGTGGGTTATATCATGGGAGAATTACTTATCAACTACCTT---AA--GTTTAT----GC---AATTGTT---------TTGT--T-------T-------AG---ACG------------------ACAACACACCGTATCTATTTCTTAAATTAGAACAGGTGCGCACTGGTTCACAGCA------TGCA-----GTGCTGCA-CACTACTACTGTGAAATAG-----ATTTG-TCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAAT-ACA-----------------GG----------GTTAAATAAATGGCGAAGCTGGACATTTCATATTCTCCATTACGT--TTTTTTAAATTCAA-A---CTCTTTG--------------AAATTCATGCAT-TTTTTAATGA-TTTTTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGCATGTTTTTAAGAA-------ATAAACACTTCTCATTTGAGAGGTTGAAAATCAAGCAGTTTTCACATC-TGTGCGAACC
gi|5 : ATTA--TTTTTTTTTACAGCGTCAGTTAGTTTCACATAGCCA--AGAACTCCCCCAGCCCTTAATGT--------------ATT---TGCATC--ACATTTT-TT---ACCAATTACTTTGTTCTACACAAGTTT---ATATTGTGCTTATTTGAA--AATTGTTGGCATG-----GACATT-TAATT------GTG-TTTCTCGGTCTTATCATGC-AACTACAGGGATGAATG-CACACTTTCTCCGAAGCATTGTTATCAGTTTATTACAAC---CAT-GTGCT---TTGGATA-------CATTGGGTTTC--CCTAGATGACGTCAATAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATC-----GGC-AATTTTT-CTGCACAGGTTAT-----CGGAGA----TTTATCAACTGCGTT---AA--GTTTAT----GA---AATTGTT---------T-GT--T-------T-------AG---ACA------------------ACAACACACCAAATCTATTTCTAAAATTAGAACAGGTGCACACTGGTTTCCAGCA------TGCT-----GCACTGCA-CAATATTGCTGGGAAACAA-----ATTTG-TCAAATTGATTAGCCTCCTTTCTCTTGCATATAGTAAAAC-ACA-----------------TA----------GTAAAATAAATGGCGAAGACGGACATTTCATATTCTCAGTTACTG--TTTTTTAAATTCAA-AAATCT-TTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGCATTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTG-AAATCAAGCACTTTTCAAATC-TGAGCGAACCTTa
gi|8 : ATTA--TTTTTTTT-ACAACT------AGTTTCACACAGCTA--AGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTTTTT---ACCAATTTCTTTGTACTACGCAAGTTT---ATCTTGTGCTCATTTGCG--AATCGTCGGCATG-----GACATT-TCATTTTACTTGTG-TTTCTGGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACACTTTCTCAGAAGCATTGTTATCCATTTATTACTAC---CATCATGTGCTTTTGGATA-------CATTGGGTTTC--CCAAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTTATTCTGTTCTCTGTATTTT-G-------------GG-------------TATTATC-----GGC--AATTTTTCTGCGCGGGTTAT-----GGGAGAAATATTTATCAACTGCGTT---AA--GTTTAT----GT---AATTGTT---------T-GT--T-------T-------AG---ACG------------------TAAACACAACATATCTATTTTTAAAATAAGAACAGGTGCGCA-------------------------------CTGCA-CAATACTTCTTGGAAACAG-----GTTTG-TCAAATTGAATAGTCTCCCTTCTCTTGCATATAGTAAAAC-AGG-----------------GA----------GTAAAATAAATGGCGACAATGGACATTTCATATTCTCTGTTACTG--TTTTTTAAATTCAA-A---CTCTTTT--------------ATATTAAAGCAC-TTTTCAATCA-TTTTTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---GAAGTT-AAAAAT-AAGCACTTTTCAAGGATGTTTTCAAGAA-------ATAAGCACTTCCCATTTGAGAGGTTGAAAATCAGGCACTTTTCAAAACATA-GCGAACCT
gi|1 : ATTA--TTTTTTTT-ACAATGTCAGTTAGTTTCACACAGCCA--AGTATTACCTCAGTT-TTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCTATTTCTTTGTACTGCACAAGTTT---ATCTTGTGCTCATTTGCA--AATTGTTGGCATG-----GCCATT-TCATTTTTCTTGTA-TTTCTCGCTCTGATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGAGGCATTGTTATCCGTTTATTACTAC---CAT-GTGCT---TCGACTA-------CATTGGGTTTC--CCCAGATGATGTCACTAGTTCAGAACAGAAGCAGCTGTTAAATTACATTTAATTCCGTTCTCTGTATTTT-G-------------GG-------------TGTTATC-----GGCAAC--TTTTCTGCACGGGTTAT-----GGGAGAATTATTAATCCACTGTGTT---CACGGGTTAT----GTGAGAATTATTAATCGACTGT-GT--T-------A-------AGTTAATGCAACTGTATGTTTAGACGACAACTCTTCGTATCTATTTTTAAAATTAGAACAAATGTGCACTGGTTCCCAGCA------TACTGCACAGCACTGCA-CAATACTGCTGGGAAACAG-----ATTGG-TCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACG------------------GA----------GTAAAATAAATGGCAGAAATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAA-A---CTCTTTT--------------AAATTCA------TTTTCAACAC-TTTTC---------------------AA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAT-AAGAACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGTACTTTTCAAATC-TGTGCGAACCTc
gi|9 : ATTAATTTTTTTTT-AAAAGTTCAGTTAGTTTCACACAGCCCTTAATGTT---TCAGATC--AACAT----------------T---TGCATC--CAATTTT-TT-----------CTTTGTACAACACAAGTCT---ATCTTGTGCTTATTTGCG--AATTGTCGGCATC-----GACGTT-TCACTTTTCTTGTG-TTTTTCAAACTTATCGTGC-TACTTCAGGGCTGAATA-CACACTTTCTTAGAGGCATTGTTATCCATTTATTGTTAC---CAT-GTGCT---TTTGATAAAAA---CATTGGGTCTC--CCCAGATGACGTCACAAGTTCAGAATATAAGCA--------------TTTGATTCTGTTCTCTGTATTTT-G-------------GG--------------GTTGTCAAAAGGG----TGTTTTCAGC-------------------AATT-----TTT-CTGTGC-----A--GGTTATAGGAG----AATTATT---------T-ATCAT-------T-------AG---ACG------------------ACAACACATCGTATCTATTTTTAAA-TTAAAACAGGTGAACACTGGTTCTCAGCA------TGCT-----GCACTGCA-CAATACTGCTGATAAACAG-----ATTCG-TCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAACACG------------------GA----------GTAAAATAAATGGCGAAGATGGGCATTTCATATTCTCCGTTACTATTTTTTTTAAGTTCAA-A---CTC--TT--------------AAATTCAAGCAC-TTTTCAATGA-CTTTTGTTTATTTTCAAGCACTTTTCAA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATC-TGTGCGAACTT
gi|12 : ATTA--TTTTTTT--ACAACTTCAGTTAGTTTCACACAGCCA--AATATTCCCTCAGCCCTTAATGT--------------CTT---TGCCTC--CCAGTTT-TT---ACCAATTTCTTTGTACTACAGAAGTTT---ATCTTGTGCTCAT---------TTG-CG------------AATT--------------G-TTTCTCGCTCTTATCATGC-GACTTCACGGCTGAATA-CACACTTTCTCCAAGGCATTGTTATCCCTTTATTACTACTACCAT-GTGCT---TTGGATA-------CATTGGGTTTC--CCCAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATT-----GGC-AATTTTT-CTGCGCGGGTTAT-----GGGA-AATTATTTATCAACTGCGTT---AA--GTTTAT----GC---AATTGTT---------T-GT--T-------T-------AG---ACG------------------ACAACACACCGTATCTATTTTTAAAATTAGAACAGGTGCACACTGGTTCCCAGCA------TGCT-----GCACTGCA-CAATACTGCTGGGAAACAG-----GTTTG-TCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAAC-
gi|15 : ATT---TTTTTTTT-AAAAATTCTGT---------ACAGACA--AGTACTCCCTCAGCCCTTAATGTTTCAACTGATCAGCCTT---TGCATA--CAGCTCT-TT---AGCAATTTCTTTGTACTACACAAATTT---ATCTTATGCTCATTTGC---AATTGTCAGCATG-----AATGTT-TCTTTTTTCTTGTG-TTTCTTGCTTTTACCGTGT-GACTTCAGGAC----------ACTTTCTCCa
gi|19 : ATTT--TTTTTTTT-AAAAGTTCAG-TAGTTCAACACAAACA--AATACTACCTC-GCCCCTAATGT--------------TTTAACTG-ATCAACC--TTT-TT---AGCGATTTCTTCGTACTGCACAAGTTT---TTCCTGTGTTCTTTTGTGATAAGCATTAGCTTGTTCAAGAAGTTCCCACTTTT-TTCTGCTTTCTcatggctgtaatgtctatctttttttacatacactgcaccaagctttcatgttgttttgggttcattgactcacttatattactatgtgcttttaataaaaaaaacattgggtttccccagatggtgtcactagttcagaacacaggcagctgttcaaattc
gi|4 : a--TTTTTTTT-ACAACTTCAATTAGTTTCACACAGCCA--AGTACTCCCTCAGCCCTTAATGT--------------CTT---AGCATC--CCATTTTTTT---ACCAATTTCTTTGTTCTCCACAAGTTT---ATCTTGTGCTCATTTGCG--AATTGTCGGCATG-----GACATT-TCATTTTTCTTGTG-TTTCTTGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAAGGTATTGTTATCCGTGTATTACCAC---CAT-GTGCG---TTGGATA-------CATTAAGTTTC--CCCAGTTGACGTCACTAGTTCAGAACACAAGTAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGG-------------GG-------------TGTTATC-----GGC--ATTTTTTCTGCGCAAGTAAT-----GGGAGAATTATATATCAACTGCGTT---AA--GTTTAT----GC---AATTGTT---------T-GT--T-------T-------AG---ACG------------------ACAACACACCGTATCTATTTTTAAAATTAGAACAGGTTCGCACTGGTTCCCAGCA------TGCT-----GCACTGCA-CAATACTGCTGGGATACAG-----GTTTG-TAAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTAAAAC-AGG-----------------GA----------GTAAAATATATGGCGAAGCTGGACATTTCATATTCTCCGTTACTT--TTTTTTAAATTCAA-A---CTCTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAA-AAGCACTATTAAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAAGTTG-AAATCAAGCACTTTTCAAATC-TGTGCAAACCTT
gi|11 : atat--TTTTTTTT-TTAAC----GTCGGTTTCACACAACCA--AGTACTCCCTCAGCCCTTAATGT--------------ATT---TGCATC--CCATTTT-TT---ACGAATTTCTTTGTACTACATAAGTTT---ATCTTGCGCTCATATGCG--AACTGTTGGCAAG-----GACATT-TCATTTTTCTTGTG-TTTGTCGCTCTTATCGTTCCGACTTCAGGACTGAAAA-CACACTTTCTCCGAGACATTGCTATCAGTTCATTACAAG---CAT-GTGCT---TTTGATA-------CATTGGGTTTC--CCCAA--GATGTCACTAGTTCAGAACACAAGCAGCTGTTAAA------TTGATTCCGTTCTC---ATTTT-G-------------GG-------------TGTTATT-----GAC-AATTTT-TCTGCGCGTGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTAT----GC---AATTGTT---------A-GT--T-------T-------AG---ACG------------------ACAATACATTGCATCTATTTGTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCA------TGCT-----GCACTGCA-CAGTACTGCTAGGAAACAG-----ATTTG-TCAAAT---------TCACTT------------GTAAAAC---A-----------------GA----------GTAAAATAAATGGTGAAGATGGACATTTCATATTCTCCGTTCCTG--TTTTTTAAATTCAA-G---CACTTTTCCCACTGACATTACAAAT--AAGCAC-TATTCAAGGA-----TGT---TTTT-AAGAAAT----AA-----GCAC-------------TTCTCATTTGAGAAGTT-GAAAATCAAGCACTTTTCAA
gi|7 : TTTATTT-ACAACTTAAGTAAGTTTCACACAGCCA--AGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CAATTTT-T----ACCAATTTTTTTGTACTACACAAGTTTTTTATCTTGTGCTCATTTGCG--AATTGTTGGCATG-----GATATT-TCATTTTTCTTGTG-TTTCTCGCTCTTATCGTGC-GGCTTCAGGGCTGAAAAACACACTTTGTTCGATGCATTGTTATCCGTTTATTACTAC---CAT-GTGCT---TGGGATA-------CATTGGGTTTC--CTCAGATGACATCACCAGTT---AACACAAGCAACTGTTAAATTGCATTTGATTCTGTTCTTTGTATTTT-G-------------GG-------------TGTTATC-----AGC-AATTTTT-CTGCGCAGGTTAA-----GGGAGAATTATTTATCAACTGCGTTTAAAA--GTTTAT----GC---AATTGTT---------T-GT--A-------T-------AG---ACG------------------ACAACACACCATGTTTATTTTTAAAATTAGAACAAGTGCACACTGGTTCCCAGCA------TGCT-----GCACTGCA-CAATACTGCTGGGAAACAG-----ATTTG-TCAAATTGAGTAGTCTCTCTTCTCTTGCATATAGTAAAAC-ACA-----------------GA----------GTAAAA-------------TGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAA-A---CTC--TT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCAACT---GACATT-AAAAAT-AAGCACTATTCAAGGACGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAACC-TGTGCGAACCTTatctgtgcgaacct
gi|10 : atcaTTTTTT-ACAAGTTCAGTTAGTTTCACACAGCCA--AGTACTCCCTTAGCCCTTAATGTTTCAGACCAAC---CTT---TGCATA--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCT-ATTTGCA--AATTGTCGGCATG-----GGCATT-TAATTTTTCTTGTG-TTTCTCGCTCTTATCGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAAGGCATTGTTATCCGTTTATT--------------------TTTGATAAAAA---CATTCGGTTTC--CCAAGATGACGTCACTAGTTCAGAACACAAGCAGCTGTTAT--TGCATTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGAGTGTTATC-----GGC-AATTTTT-CTGCGCGGGTTAT-----GGGAGAATTATTTATCAGTTGTGTT---AA--CTTCAT-------------------------------T-------A-------AG---ACG------------------ACAACACACCGTACCTAATTTTAAAATTA----------GTACAGGT----------------------------GCA-CA------CTGGGAAACAG-----ATTTG-TCAAACTGAGTAGTCGACCTTCTCTTGCATGTAGTAAAAC-ACA-----------------GA----------GTAAAATAAATGTTGAAGATGGACATTTCATATACTCCATTACTA--TTTTTAAAATTCAA-A---CTC--TT--------------AATTTCAAGCAC-TTTTCAATGA-TTTTTGTTCATTTT-C----------AA-----GCACTTTTTAAGCATTTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGAATGTTTTTATGAA-------ATAAGCACTTTTCATTTGAGAGGCTGAAAACCAAGCACTTTTCAAATA-TGTGCGAACCTT
gi|24 : GGCTGATTA-CACATTTCCCCGGAGGCATTGTTAT
gi|14 : GCTGAATA-CACACTTTCCCAGAGGCATTGTCATCCATTTATTACTAC---TAT-GTGCT---TTTGATAAAAAA--CATTGGGTTTT--CCCAGATGGCGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATTCATTTGATCCT-TTCTCTGTATTTT-GGAAATGTCATAAAGG-------------TGTTATC-----GGC-AATTTTTTTT-CGCTGGTTAG-----GGGAGAATTATTTACCAACTACAAT---AA--GTTTGT----GC---A----TT---------T-GT--TAGGGGAAA-------AG---ATG------------------AAAACATGCTGTATCTATTTTTAAAATTAGAAGAGGTGCACACTGGTTCCCAGCA------TGAT-----GCACTGCA-CAATAATGCCGGAAAACAG-----ATTTG-TCAAATTGAGTAGTTTCCCTTCCCTTGCATATAGTAAAAC-CGAAAAACCTTTAAAACACGGG----------GTAAAATAAATGGC
gi|15 : TATATTACTA------T-GTGCT---TTTAATAAAAAAAACATTGGGTTTC--CCCAGATGGTGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATa
gi|20 : attttttttttaaaaattctgtacagacaagtactccctcagcccttaatgtttcaactgatcagcctttgcatacagctctttagcaatttctttgtactacacaaatttatcttatgctcatttgcaattgtcagcatgaatgtttcttttttcttgtgtttcttgcttttaccgtgtgacttcaggacactttctcccatggctgtaatgtctatctttttttacatacactgcaccaagctttcatgttgttttgggttcattgactcactA-------CATTGGCTTTC--CCCAGATGACATCACTAGTTTACAACACAGGCAGGTGTTCAAATTCATTTGATTATTTTCTCTGTATTTT-tc
gi|22 : gtgtgtttgataaaaTGGGTTTCGACCGGATTGACGTCA------CAGAGCACA-GCAGCTGTTCGAATACATcg
gi|13 : ataaaaaaaatc-------------GG-------------TGTTGTC-----GGC-AATTTT--CTGCGCGGGTTAT-----GGGATAATTATTTATCAACTGCGTT----------CAT----GC---A----TT---------T-GC--T-------GGAGGAAAAG---ATG------------------AAAACACGCCGTATCTATTTTCCAAATTAGAAGAGGTGCCCACTGGTTCCCAGCA------TATT-----GCACTTCA-CAATACTGCTGGGAATCAG-----ATTTG-TCAAACTGAGTAGTCTCCCTTCCCTTGCATATAGTAAAAC-ACA-----------------GAGTAAAACAGGGTAAAATAAATGGCAAATATGGACATTTCATATTCTCCTTTACTA--TTTTTTTAATTCAA-A-----CTTTT--------------AAATTCGACCTT-TCTTCAATGATTTTTTTTTCATTTT-C----------AA-----GCAC-----------TTTTCCTGCT---GATATT-AAATAT-AAGCACCATACAAGGAAGTTTTTAAGAA-------ATAAGCACTTCTCA---------TTGAAAATCAAGCACTTTTCAAATC-TGTGCGAACCTT
gi|7 : CTGTTTCCCAGCAGTAT--TG-T-----GCAGTGCAGCA----TGCTGGGAACCAG-----
gi|1 : atcatttatttacaacttaagtaagtttcacacagccaagtactccctcagcccttaatgtctttgcatccaatttttaccaatttttttgtactacacaagttttttatcttgtgctcatttgcgaattgttggcatggatatttcatttttcttgtgtttctcgctcttatcgtgcggcttcagggctgaaaaacacactttgttcgatgcattgttatccgtttattactaccatgtgcttgggatacattgggtttcctcagatgacatcaccagttaacacaagcaactgttaaattgcatttgattctgttctttgtattttgggtgttatcagcaatttttctgcgcaggttaagggagaattatttatcaactgcgtttaaaagtttatgcaattgtttgtatagacgacaacacaccatgtttatttttaaaattagaacaagtgcacaCTGTTTCCCAGCAGTATTGTGCA-----GTGCTGTG-CAGTA-TGCTGGGAACCAGTGCACATTTGTTCTAATTatttgtcaaattgagtagtctctcttctcttgcatatagtaaaacacagagtaaaatggacatttcatattctccgttactgttttttaaattcaaactcttaaattcaagcacttttcaatgatttttgttcattttcaagcacttttccaactgacattaaaaataagcactattcaaggacgtttttaagaaataagcacttctcatttgagaggttgaaaatcaagcacttttcaaacctgtgcgaacctt
gi|12 : attattttttttacaatgtcagttagtttcacacagccaagtattacctcagttttaatgtctttgcatcccattttttacctatttctttgtactgcacaagtttatcttgtgctcatttgcaaattgttggcatggccatttcatttttcttgtatttctcgctctgatcgtgcgacttcagggctgaatacacactttctccgaggcattgttatccgtttattactaccatgtgcttcgactacattgggtttccccagatgatgtcactagttcagaacagaagcagctgttaaattacatttaattccgttctctgtattttgggtgttatcggcaacttttctgcacgggttatgggagaattattaatccactgtgttcacgggttatgtgagaattattaatcgactgtgttaagttaatgcaactgtatgtttagacgacaactcttcgtatctatttttaaCTGTTTCCCAGCAGTAT--TG-T-----GCAGTGCAGCA----TGCTGGGAACCAG-----attggtcaaattgagtagtctcccttctcttgcatatagtaaaacacggagtaaaataaatggcagaaatggacatttcatattctccgttactgttttttaaattcaaactcttttaaattcattttcaacacttttcaagcacttttcccactgacattaaaaataagaactattcaaggatgtttttaagaaataagcacttctcatttgagaggttgaaaatcaagtacttttcaaatctgtgcgaacct
gi|11 : attatttttttacaacttcagttagtttcacacagccaaatattccctcagcccttaatgtctttgcctcccagtttttaccaatttctttgtactacagaagtttatcttgtgctcatttgcgaattgtttctcgctcttatcatgcgacttcacggctgaatacacactttctccaaggcattgttatccctttattactactaccatgtgctttggatacattgggtttccccagatgacgtcactagttcagaacacaagcagctgttaaaatgcatttgattctgttctctgtattttgggtgttattggcaatttttctgcgcgggttatgggaaattatttatcaactgcgttaagtttatgcaattgtttgtttagacgacaacacaccgtatctatttttaaaattagaacaggtgcacaCTGTTTCCTAGCAG-----TACT-----GTGCAGTG-CAGCA-TGCTGGGAACCAG-----gtttgtcaaattgagtagtctcccttctcttgcatatagtaaaaca
gi|13 : ttttttttttaacgtcggtttcacacaaccaagtactccctcagcccttaatgtatttgcatcccattttttacgaatttctttgtactacataagtttatcttgcgctcatatgcgaactgttggcaaggacatttcatttttcttgtgtttgtcgctcttatcgttccgacttcaggactgaaaacacactttctccgagacattgctatcagttcattacaagcatgtgcttttgatacattgggtttccccaagatgtcactagttcagaacacaagcagctgttaaattgattccgttctcattttgggtgttattgacaatttttctgcgcgtgttatgggagaattatttatcaactgcgttaagtttatgcaattgttagtttagacgacaatacattgcatctatttgtaaaattagaacaggtgcgcaCTGATTCCCAGCAG-----TATT-----GTGAAGTG-CAATA-TGCTGGGAACCAG-----atttgtcaaattcacttgtaaaacagagtaaaataaatggtgaagatggacatttcatattctccgttcctgttttttaaattcaagcacttttcccactgacattacaaataagcactattcaaggatgtttttaagaaataagcacttctcatttgagaagttgaaaatcaagcacttttcaaatctgtgcgaacct
gi|16 : ggtgttgtcggcaattttctgcgcgggttatgggataattatttatcaactgcgttcatgcatttgctggaggaaaagatgaaaacacgccgtatctattttccaaattagaagaggtgcccaTTG-TAAAACTGAGTAGTCTCCCTTCCCTTGCATAAAGTAAAAC-ACA-----------------GA----------GTAAAATAAATGGCAAATATGGACATTTCATATTCTCCGTTACTA--TTTTTT----------------------------------AAATTCAAACTCATTTTCGATGA--TTTTGTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---GACATT-AAAAAT-AAACACTATTCAAGGAGGTTTTAAAGAA-------ATAAGCACTTCTCATCTGAGAGGTTGAAAATCAAGCACTTTTCAAATC-TGTGCGAACCTTatttgtcaaactgagtagtctcccttcccttgcatatagtaaaacacagagtaaaacagggtaaaataaatggcaaatatggacatttcatattctcctttactatttttttaattcaaacttttaaattcgacctttcttcaatgatttttttttcattttcaagcacttttcctgctgatattaaatataagcaccatacaaggaagtttttaagaaataagcacttctcattgaaaatcaagcacttttcaaatctgtgcgaacctt
gi|17 : A----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCGCTGTTACTGT-TTTTTTAAATTCAATA-----CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTTCATTTT-C----------AA-----GGAC-----------TTTTCCCTCT---GATATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGCGGCTGAAAATCAAGCACTTTTAAAATC-CGTGCAAACCT
gi|18 : CTCTGTTACTA--TTTTTTAAATTCA------CTCTTTT--------------AAATTCAAGCAC-TTTTCAATAG-TTTT-GTTCATTTT-C----------AA-----GCAC-----------TTTTCCCACT---CACATT-AAAAAT-AAGCACTTTTCAAGGAGGTTTTTAAGAA-T--------AACACTTCTCATCCGAGAGGTTGAAAATCAAGCACTTTTCAAATC-TGTGCGAACCTT
gi|11 : -TTCCTGTT--TTTT-A----------AATTCAAGCAC-----------TTTTCCCACT---GACATT-ACAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAAGTTGAAAATCAAGCACTTTTCAAATC-TGTGCGAACCT
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|21 ): GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGATATCAAGTTCTGGGATAGACTA
Unaligned ( gi|23 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
Alignments
lowQualScore : 33333333333333 222222222222222 2222222 1111111111111 3333333333333 1 111111111 111111111111111 11111111 1111111111 11111111111111111 1111111111 11111111111111 11111111111 11111111111
lowQualScore : 44 2 00000000000000 555 33 5 777 555 3 2 2 444 2 444 2 111111111111111 2 2 33 5555555 2 2 5 2 5555555555555 1111111111111 1 3 77777 555 33 555 3 111111111 2 666666666666666 00000000 2222222222 6666 77777 6 88888888888888888 1111111111 66 444 2 55555555555555 2 2 5555 2 22222222222 22222222222 444 2 2 9999999 2
lowQualScore : .. . .............. ... .. . ... ... . . . ... . ... . ............... . . .. ....... . . . . ............. ............. . . ..... ... .. ... . ......... . ............... ........ .......... .... ..... . ................. .......... .. ... . .............. . . .... . ........... ........... ... . . ....... .
lowQualScore : 66 9 44444444444444 000 99 7 999 000 1 7 7 444 5 777 7 333333333333333 5 5 44 0000000 5 5 2 9 7777777777777 4444444444444 5 7 11111 000 99 000 2 444444444 9 999999999999999 44444444 5555555555 1111 11111 1 77777777777777777 7777777777 33 777 7 77777777777777 7 7 7777 7 77777777777 77777777777 777 7 7 3333333 9
consensus : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACGGA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
Reference ( family-6898 ) : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCGCTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACAGA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|1 : ATTA--TTTTTTTT-ACAATGTCAGTTAGTTTCACACAGCCAAGTATTACCTCAGTT-TTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCTATTTCTTTGTACTGCACAAGTTT---ATCTTGTGCTCATTTGCAAATTGTTGGCATGGCCATTTCATTTTTCTTGTATTTCTCGCTCTGATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--CGACTA-------CATTGGGTTTCC-CCAGAT-GATGTCACTAGTTCAGAACAGAAGCAGCTGTTAAATTACATTTAATTCCGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAA-CTTTTCTGCACGGGTTAT-----GGGAGAATTATTAATCCACTGTGTT---CACGGGTTATGTGAGAATTATTAATCGACTGT-GTT-------A-------AGTTAATGCAACTGTATGTTTAGACGACA-ACTCTTCGTATCTATTTTTAAAATTAGAACAAATGTGCACTGGTTCCCAGCATACTGCACAGCACTGCACAATACTGCTGGGAAACAGATTGGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACGGA----------GTAAAATAAATGGCAGAAATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCA------TTTTCAA----------------CACTTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGAACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGTACTTTTCAAATCTGT-GCGAACCT
gi|10 : TTTTTT-ACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTTAGCCCTTAATGTTTCAGACCAAC---CTT---TGCATA--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCT-ATTTGCAAATTGTCGGCATGGGCATTTAATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGC---ATTGT-TATCCGTTTAT---T------------------------------TT--TG-ATAAAAA---CATTCGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAT--TGCATTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGAGTGTTATCGGCAATTTTT-CTGCGCGGGTTAT-----GGGAGAATTATTTATCAGTTGTGTT---AA--CTTCAT-------------------------T-------A-------AG--------AC----------GACAACACAC----CGTACCTAATTTTAAAATTA----------GTACAGGT----------------------GCACA------CTGGGAAACAGATTTGTCAAACTGAGTAGTCGACCTTCTCTTGCATGTAGTA-----------------AAACACAGA----------GTAAAATAAATGTTGAAGATGGACATTTCATATACTCCATTACTA--TTTTTAAAATTCAAA---CT-CTT----------------AATTTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTTTTAAGCATTTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGAATGTTTTTATGAA-------ATAAGCACTTTTCATTTGAGAGGCTGAAAACCAAGCACTTTTCAAATATGT-GCGAACCTT
gi|11 : --TTTTTTTT-TTAAC----GTCGGTTTCACACAACCAAGTACTCCCTCAGCCCTTAATGT--------------ATT---TGCATC--CCATTTT-TT---ACGAATTTCTTTGTACTACATAAGTTT---ATCTTGCGCTCATATGCGAACTGTTGGCAAGGACATTTCATTTTTCTTGTGTTTGTCGCTCTTATCGTTCCGACTTCAGGACTGAAAA-CACACTTTCTCCGA-GAC---ATTGC-TATCAGTTCAT---TAC-AAG---------------CATG-TGC-TT--TTGATA-------CATTGGGTTTCC-CCAA---GATGTCACTAGTTCAGAACACAAGCAGCTGTTAAA------TTGATTCCGTTCTC---ATTTT-G-------------GG-------------TGTTATTGACAATTTT-TCTGCGCGTGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------A-GTT-------T-------AG--------AC----------GACAATACAT----TGCATCTATTTGTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAGTACTGCTAGGAAACAGATTTGTCAAAT---------TCACTT------------GTA-----------------AA--ACAGA----------GTAAAATAAATGGTGAAGATGGACATTTCATATTCTCCGTTCCTG--TTTTTTAAATTCAAG---CA-CTTTTCCCACTGACATTACAAAT--AAGCAC-TATTCAAGGA-TGTTT-TTAAGAAA-T----AAG-----------CAC--T-----------TCTCATTTGAGAAGTT-GAAAATCAAGCACTTTTCAA
gi|12 : ATTA--TTTT-TTT-ACAACTTCAGTTAGTTTCACACAGCCAAATATTCCCTCAGCCCTTAATGT--------------CTT---TGCCTC--CCAGTTT-TT---ACCAATTTCTTTGTACTACAGAAGTTT---ATCTTGTGCTCATTTGCGAATTG-------------------TTTCT---------CGCTCTTATCATGC-GACTTCACGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCCCTTTATTACTAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATTGGCAA-TTTTTCTGCGCGGGTTAT-----GGGA-AATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGGTTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAatctgtgcgaacct
gi|13 : -------------GG-------------TGTTGTCGGCAATTTT--CTGCGCGGGTTAT-----GGGATAATTATTTATCAACTGCGTT----------CATGC---A----TT---------T-GCT-------GGAGGAAAAG--------AT----------GAAAACACGC----CGTATCTATTTTCCAAATTAGAAGAGGTGCCCACTGGTTCCCAGCATATT-----GCACTTCACAATACTGCTGGGAATCAGATTTGTCAAACTGAGTAGTCTCCCTTCCCTTGCATATAGTA-----------------AAACACAGAGTAAAACAGGGTAAAATAAATGGCAAATATGGACATTTCATATTCTCCTTTACTA--TTTTTTTAATTCAAA------CTTTT--------------AAATTCGACCTT-TCTTCAATGATTTTTTTTT----CA-TTTTCAAG-----------CACTTT-----------TCCTGCT---GATATT-AAATAT-AAGCACCATACAAGGAAGTTTTTAAGAA-------ATAAGCACTTCTCA---------TTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|14 : GCTGAATA-CACACTTTCCCAGA-GGC---ATTGT-CATCCATTTAT---TAC-TAC---------------TATG-TGC-TT--TTGATAAAAAA--CATTGGGTTTTC-CCAGAT-GGCGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATTCATTTGATCCT-TTCTCTGTATTTT-GGAAATGTCATAAAGG-------------TGTTATCGGCAATTTTTTTT-CGCTGGTTAG-----GGGAGAATTATTTACCAACTACAAT---AA--GTTTGTGC---A----TT---------T-GTTAGGGGAAA-------AG--------AT----------GAAAACATGC----TGTATCTATTTTTAAAATTAGAAGAGGTGCACACTGGTTCCCAGCATGAT-----GCACTGCACAATAATGCCGGAAAACAGATTTGTCAAATTGAGTAGTTTCCCTTCCCTTGCATATAGTAAAACCGAAAAACCTTTAAAACACGGG----------GTAAAATAAATGGC
gi|15 : ATT---TTTTTTTT-AAAAATTCTGT---------ACAGACAAGTACTCCCTCAGCCCTTAATGTTTCAACTGATCAGCCTT---TGCATA--CAGCTCT-TT---AGCAATTTCTTTGTACTACACAAATTT---ATCTTATGCTCATTTGC-AATTGTCAGCATGAATGTTTCTTTTTTCTTGTGTTTCTTGCTTTTACCGTGT-GACTTCAGG----------ACACTTTCTCCCATGGCTGTAATGTCTATCTTTTT-T---TACATACACTGCACCAAGCTTTCATGTTGT-TT--TGGGTT-------CATTGa
gi|15 : C---ATTG---ACTCACTTAT----AT-TAC---------------TATG-TGC-TT--TTAATAAAAAAAACATTGGGTTTCC-CCAGAT-GGTGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATactcacttatattactatgtgcttttaataaaaaaaacattgggtttccccagatggtgtcactagttcagaacacaggcagctgttcaaattc
gi|16 : attttttttttaaaaattctgtacagacaagtactccctcagcccttaatgtttcaactgatcagcctttgcatacagctctttagcaatttctttgtactacacaaatttatcttatgctcatttgcaattgtcagcatgaatgtttcttttttcttgtgtttcttgcttttaccgtgtgacttcaggacactttctcccatggctgtaatgtctatctttttttacatacactgcaccaagctttcatgttgttttgggttTTGTAAAACTGAGTAGTCTCCCTTCCCTTGCATAAAGTA-----------------AAACACAGA----------GTAAAATAAATGGCAAATATGGACATTTCATATTCTCCGTTACTA--TTTTTT----------------------------------AAATTCAAACTCATTTTCGATGA--TTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAACACTATTCAAGGAGGTTTTAAAGAA-------ATAAGCACTTCTCATCTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTTtc
gi|17 : A----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCGCTGTTACTGT-TTTTTTAAATTCAA-----TACTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------GACTTT-----------TCCCTCT---GATATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGCGGCTGAAAATCAAGCACTTTTAAAATCCGT-GCAAACCT
gi|18 : CTCTGTTACTA--TTTTTTAAATTCA-----CT-CTTTT--------------AAATTCAAGCAC-TTTTCAAT-A-GTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---CACATT-AAAAAT-AAGCACTTTTCAAGGAGGTTTTTAAG-A-------ATAA-CACTTCTCATCCGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|19 : ATTT--TTTTTTTT-AAAAGTTCAG-TAGTTCAACACAAACAAATACTACCTC-GCCCCTAATGT--------------TTTAACTG-ATCAACC--TTT-TT---AGCGATTTCTTCGTACTGCACAAGTTT---TTCCTGTGTTCTTTTGTGA
gi|2 : aATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAATACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATTTTGTGCTCATTTGCGAATTGTCGGCATGGAAATTTCATTTTTCTTGTGTTTCTTGCTCTTTTTGTGC-GACTTCAGGGCTGAATA-CATACTTTTTCCGA-GGC---ATTGT-TATCCGTGTAT---TAC-TAC---------------CGTA-TGC-AT--TGGATA-------CATTGGGTTTCC-CCAAAT-GACGTCAATTGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCTCTTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATTTACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AT----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTACATATAGTA-----------------AAACCGAGA----------GTAAAATAAATGGCGAAGTTGGACATTTCATATTCTCTGTTATTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATAA-TTTTTGTT----CA-TTTTAAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAAGTACAATGTAAACACTCCTCATTTGAGAAGTTGAAAATCAAGCACTTTTTAAATCTGT-GCGAACCTTtaagcattagcttgttcaagaagttcccacttttttctgctttct
gi|20 : TG-TGT-TTGATAAAAA-------CATTGGCTTTCC-CCAGAT-GACATCACTAGTTTACAACACAGGCAGGTGTTCAAATTCATTTGATTATTTTCTCTGTATTTT-
gi|22 : gTGGGTTTCGACCGGATTGACGTCAC------AGAGCACA-GCAGCTGTTCGAATACATcg
gi|24 : ataaaaaaaatcGGCTGATTA-CACATTTCCCCGGA-GGC---ATTGT-TAT
gi|3 : ATTA--TTTTTTTT-ACACCTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGACCTTAATGT--------------CTT---TGCATC--CCATTTT-TTT--ACCTATGTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCAGCATGGACATTTCATTTT-CTTATGTTTCTTGCTCT-ATCGTGC-GACTTCAGGGCTGAATA--ACACTTTCTCCGA-GGC---ATTGT-TATCCATTTAT---TAC-TAT---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-C-AGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GA-------------TATTATCGGCAATTTTT-CTGCGTGGGTTATATCATGGGAGAATTACTTATCAACTACCTT---AA--GTTTATGC---AATTGTT---------TTGTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTCTTAAATTAGAACAGGTGCGCACTGGTTCACAGCATGCA-----GTGCTGCACACTACTACTGTGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAATACAGG----------GTTAAATAAATGGCGAAGCTGGACATTTCATATTCTCCATTACGT--TTTTTTAAATTCAAA---CT-CTTTG--------------AAATTCATGCAT-TTTTTAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGCATGTTTTTAAGAA-------ATAAACACTTCTCATTTGAGAGGTTGAAAATCAAGCAGTTTTCACATCTGT-GCGAACC
gi|4 : --TTTTTTTT-ACAACTTCAATTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---AGCATC--CCATTTTTTT---ACCAATTTCTTTGTTCTCCACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTTGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGT---ATTGT-TATCCGTGTAT---TAC-CAC---------------CATG-TGC-GT--TGGATA-------CATTAAGTTTCC-CCAGTT-GACGTCACTAGTTCAGAACACAAGTAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGG-------------GG-------------TGTTATCGGC-ATTTTTTCTGCGCAAGTAAT-----GGGAGAATTATATATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTTCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGATACAGGTTTGTAAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGGGA----------GTAAAATATATGGCGAAGCTGGACATTTCATATTCTCCGTTACTT--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAA-AAGCACTATTAAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAAGTTG-AAATCAAGCACTTTTCAAATCTGT-GCAAACCTTa
gi|5 : atatATTA--TTTTTTTTTACAGCGTCAGTTAGTTTCACATAGCCAAGAACTCCCCCAGCCCTTAATGT--------------ATT---TGCATC--ACATTTT-TT---ACCAATTACTTTGTTCTACACAAGTTT---ATATTGTGCTTATTTGAAAATTGTTGGCATGGACATTTAATT------GTGTTTCTCGGTCTTATCATGC-AACTACAGGGATGAATG-CACACTTTCTCCGA-AGC---ATTGT-TATCAGTTTAT---TAC-AAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CTAGAT-GACGTCAATAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTT-CTGCACAGGTTAT-----CGGAGA----TTTATCAACTGCGTT---AA--GTTTATGA---AATTGTT---------T-GTT-------T-------AG--------AC----------AACAACACAC----CAAATCTATTTCTAAAATTAGAACAGGTGCACACTGGTTTCCAGCATGCT-----GCACTGCACAATATTGCTGGGAAACAAATTTGTCAAATTGATTAGCCTCCTTTCTCTTGCATATAGTA-----------------AAACACATA----------GTAAAATAAATGGCGAAGACGGACATTTCATATTCTCAGTTACTG--TTTTTTAAATTCAAAAATCT--TTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGCATTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTG-AAATCAAGCACTTTTCAAATCTGA-GCGAACCTT
gi|6 : ATTA--TTTTTTT--ACAACATCAGTTAGTTTCACACAGC-AAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TTTTTACCAATTTCTTTCTACTACACAAGTTT---ATCCTGTGCTCATTTGCGAATTGTCGGCAGGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCTGTTTAT---TAC-GAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-TCATAT-GACGTCACTAGTTCAAGACACAAGCAGCTGTTAAATTGCATTTTGTTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTCTCGGCAATTTTT-CTTCGCGGGTTAT-----GGGAGAATTATTTATTAACTGCGTT---AA--GTTTGTGC---AATTGTT---------T-GTT-------T-------AG--------AC-------------AACACAC----CGTTTCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCGGCATGCT-----GCACTGCACAATACTGCTGGAAAACAGATTTGTCAAATTGAGTAGTCTTCCTTCTCTTGCATATAGTA-----------------AAACACAGA----------GTAAAATAAATTGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGT-TTTGTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATTAAAAAAT-AAGCACTATTCAG--------TTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACATTTCAAATCTGT-GCGAAC
gi|7 : TTTATTT-ACAACTTAAGTAAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CAATTTT-T----ACCAATTTTTTTGTACTACACAAGTTTTTTATCTTGTGCTCATTTGCGAATTGTTGGCATGGATATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GGCTTCAGGGCTGAAAAACACACTTTGTTCGA-TGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--GGGATA-------CATTGGGTTTCC-TCAGAT-GACATCACCAGTT---AACACAAGCAACTGTTAAATTGCATTTGATTCTGTTCTTTGTATTTT-G-------------GG-------------TGTTATCAGCAATTTTT-CTGCGCAGGTTAA-----GGGAGAATTATTTATCAACTGCGTTTAAAA--GTTTATGC---AATTGTT---------T-GTA-------T-------AG--------AC----------GACAACACAC----CATGTTTATTTTTAAAATTAGAACAAGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCTCTTCTCTTGCATATAGTA-----------------AAACACAGA----------GTAAA-------------ATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCAACT---GACATT-AAAAAT-AAGCACTATTCAAGGACGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAACCTGT-GCGAACCTT
gi|8 : atcaATTA--TTTTTTTT-ACAACT------AGTTTCACACAGCTAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTTTTT---ACCAATTTCTTTGTACTACGCAAGTTT---ATCTTGTGCTCATTTGCGAATCGTCGGCATGGACATTTCATTTTACTTGTGTTTCTGGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACACTTTCTCAGA-AGC---ATTGT-TATCCATTTAT---TAC-TACCAT------------CATG-TGCTTT--TGGATA-------CATTGGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTTATTCTGTTCTCTGTATTTT-G-------------GG-------------TATTATCGGCAA-TTTTTCTGCGCGGGTTAT-----GGGAGAAATATTTATCAACTGCGTT---AA--GTTTATGT---AATTGTT---------T-GTT-------T-------AG--------AC----------GTAAACACAA----CATATCTATTTTTAAAATAAGAACAGGTGCGCA-------------------------CTGCACAATACTTCTTGGAAACAGGTTTGTCAAATTGAATAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGGGA----------GTAAAATAAATGGCGACAATGGACATTTCATATTCTCTGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------ATATTAAAGCAC-TTTTCAATCA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GAAGTT-AAAAAT-AAGCACTTTTCAAGGATGTTTTCAAGAA-------ATAAGCACTTCCCATTTGAGAGGTTGAAAATCAGGCACTTTTCAAAAC-ATAGCGAACCT
gi|9 : ATTAATTTTTTTTT-AAAAGTTCAGTTAGTTTCACACAGCCC-TTAATGTTTCAGATC--AACAT----------------T---TGCATC--CAATTTT-TT-----------CTTTGTACAACACAAGTCT---ATCTTGTGCTTATTTGCGAATTGTCGGCATCGACGTTTCACTTTTCTTGTGTTTTTCAAACTTATCGTGC-TACTTCAGGGCTGAATA-CACACTTTCTTAGA-GGC---ATTGT-TATCCATTTAT---TGT-TAC---------------CATG-TGC-TT--TTGATAAAAA---CATTGGGTCTCC-CCAGAT-GACGTCACAAGTTCAGAATATAAGCA--------------TTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGGGTGTTTTCAGCAATTTTT-CTGTGCAGGTTAT-----AGGAGAATTAT-----------------------TTAT-C---A-------------------T-------T-------AG--------AC----------GACAACACAT----CGTATCTATTTTTAAA-TTAAAACAGGTGAACACTGGTTCTCAGCATGCT-----GCACTGCACAATACTGCTGATAAACAGATTCGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACGGA----------GTAAAATAAATGGCGAAGATGGGCATTTCATATTCTCCGTTACTATTTTTTTTAAGTTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-CTTTTGTT----TA-TTTTCAAGCACTTTTCAAGCACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACTTc
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGATATCAAGTTCTGGGATAGACTA
Unaligned ( gi|23 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
Alignments
lowQualScore : 33333333333333 222222222222222 2222222 1111111111111 3333333333333 1 111111111 111111111111111 11111111 1111111111 11111111111111111 1111111111 11111111111111 11111111111 11111111111
lowQualScore : 44 2 00000000000000 555 33 5 777 555 3 2 2 444 2 444 2 111111111111111 2 2 33 5555555 2 2 5 2 5555555555555 1111111111111 1 3 77777 555 33 555 3 111111111 2 666666666666666 00000000 2222222222 6666 1 77777 88888888888888888 2 1111111111 66 444 2 55555555555555 2 2 5555 2 22222222222 22222222222 444 2 2 9999999 2
lowQualScore : .. . .............. ... .. . ... ... . . . ... . ... . ............... . . .. ....... . . . . ............. ............. . . ..... ... .. ... . ......... . ............... ........ .......... .... . ..... ................. . .......... .. ... . .............. . . .... . ........... ........... ... . . ....... .
lowQualScore : 66 9 44444444444444 000 99 7 999 000 1 7 7 444 5 777 7 333333333333333 5 5 44 0000000 5 5 2 9 7777777777777 4444444444444 5 7 11111 000 99 000 2 444444444 9 999999999999999 44444444 5555555555 1111 1 11111 77777777777777777 9 7777777777 33 777 7 77777777777777 7 7 7777 7 77777777777 77777777777 777 7 7 3333333 9
consensus : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
Reference ( family-6898 ) : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|1 : ATTA--TTTTTTTT-ACAATGTCAGTTAGTTTCACACAGCCAAGTATTACCTCAGTT-TTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCTATTTCTTTGTACTGCACAAGTTT---ATCTTGTGCTCATTTGCAAATTGTTGGCATGGCCATTTCATTTTTCTTGTATTTCTCGCTCTGATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--CGACTA-------CATTGGGTTTCC-CCAGAT-GATGTCACTAGTTCAGAACAGAAGCAGCTGTTAAATTACATTTAATTCCGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAA-CTTTTCTGCACGGGTTAT-----GGGAGAATTATTAATCCACTGTGTT---CACGGGTTATGTGAGAATTATTAATCGACTGT-GTT-------A-------AGTTAATGCAACTGTATGTTTAGACGACA-ACTCTTCGTATCTATTTTTAAAATTAGAACAAATGTGCACTGGTTCCCAGCATACTGCACAGCACTGCACAATACTGCTGGGAAACAGATTGGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCAGAAATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCA------TTTTCAA----------------CACTTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGAACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGTACTTTTCAAATCTGT-GCGAACCT
gi|10 : TTTTTT-ACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTTAGCCCTTAATGTTTCAGACCAAC---CTT---TGCATA--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCT-ATTTGCAAATTGTCGGCATGGGCATTTAATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGC---ATTGT-TATCCGTTTAT---T------------------------------TT--TG-ATAAAAA---CATTCGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAT--TGCATTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGAGTGTTATCGGCAATTTTT-CTGCGCGGGTTAT-----GGGAGAATTATTTATCAGTTGTGTT---AA--CTTCAT-------------------------T-------A-------AG--------AC----------GACAACACAC----CGTACCTAATTTTAAAATTA----------GTACAGGT----------------------GCACA------CTGGGAAACAGATTTGTCAAACTGAGTAGTCGACCTTCTCTTGCATGTAGTA-----------------AAACACA-GA----------GTAAAATAAATGTTGAAGATGGACATTTCATATACTCCATTACTA--TTTTTAAAATTCAAA---CT-CTT----------------AATTTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTTTTAAGCATTTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGAATGTTTTTATGAA-------ATAAGCACTTTTCATTTGAGAGGCTGAAAACCAAGCACTTTTCAAATATGT-GCGAACCTT
gi|11 : --TTTTTTTT-TTAAC----GTCGGTTTCACACAACCAAGTACTCCCTCAGCCCTTAATGT--------------ATT---TGCATC--CCATTTT-TT---ACGAATTTCTTTGTACTACATAAGTTT---ATCTTGCGCTCATATGCGAACTGTTGGCAAGGACATTTCATTTTTCTTGTGTTTGTCGCTCTTATCGTTCCGACTTCAGGACTGAAAA-CACACTTTCTCCGA-GAC---ATTGC-TATCAGTTCAT---TAC-AAG---------------CATG-TGC-TT--TTGATA-------CATTGGGTTTCC-CCAA---GATGTCACTAGTTCAGAACACAAGCAGCTGTTAAA------TTGATTCCGTTCTC---ATTTT-G-------------GG-------------TGTTATTGACAATTTT-TCTGCGCGTGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------A-GTT-------T-------AG--------AC----------GACAATACAT----TGCATCTATTTGTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAGTACTGCTAGGAAACAGATTTGTCAAAT---------TCACTT------------GTA-----------------AAACA---GA----------GTAAAATAAATGGTGAAGATGGACATTTCATATTCTCCGTTCCTG--TTTTTTAAATTCAAG---CA-CTTTTCCCACTGACATTACAAAT--AAGCAC-TATTCAAGGA-TGTTT-TTAAGAAA-T----AAG-----------CAC--T-----------TCTCATTTGAGAAGTT-GAAAATCAAGCACTTTTCAA
gi|12 : ATTA--TTTT-TTT-ACAACTTCAGTTAGTTTCACACAGCCAAATATTCCCTCAGCCCTTAATGT--------------CTT---TGCCTC--CCAGTTT-TT---ACCAATTTCTTTGTACTACAGAAGTTT---ATCTTGTGCTCATTTGCGAATTG-------------------TTTCT---------CGCTCTTATCATGC-GACTTCACGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCCCTTTATTACTAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATTGGCAA-TTTTTCTGCGCGGGTTAT-----GGGA-AATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGGTTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAatctgtgcgaacct
gi|13 : -------------GG-------------TGTTGTCGGCAATTTT--CTGCGCGGGTTAT-----GGGATAATTATTTATCAACTGCGTT----------CATGC---A----TT---------T-GCT-------GGAGGAAAAG--------AT----------GAAAACACGC----CGTATCTATTTTCCAAATTAGAAGAGGTGCCCACTGGTTCCCAGCATATT-----GCACTTCACAATACTGCTGGGAATCAGATTTGTCAAACTGAGTAGTCTCCCTTCCCTTGCATATAGTA-----------------AAACACA-GAGTAAAACAGGGTAAAATAAATGGCAAATATGGACATTTCATATTCTCCTTTACTA--TTTTTTTAATTCAAA------CTTTT--------------AAATTCGACCTT-TCTTCAATGATTTTTTTTT----CA-TTTTCAAG-----------CACTTT-----------TCCTGCT---GATATT-AAATAT-AAGCACCATACAAGGAAGTTTTTAAGAA-------ATAAGCACTTCTCA---------TTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|14 : GCTGAATA-CACACTTTCCCAGA-GGC---ATTGT-CATCCATTTAT---TAC-TAC---------------TATG-TGC-TT--TTGATAAAAAA--CATTGGGTTTTC-CCAGAT-GGCGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATTCATTTGATCCT-TTCTCTGTATTTT-GGAAATGTCATAAAGG-------------TGTTATCGGCAATTTTTTTT-CGCTGGTTAG-----GGGAGAATTATTTACCAACTACAAT---AA--GTTTGTGC---A----TT---------T-GTTAGGGGAAA-------AG--------AT----------GAAAACATGC----TGTATCTATTTTTAAAATTAGAAGAGGTGCACACTGGTTCCCAGCATGAT-----GCACTGCACAATAATGCCGGAAAACAGATTTGTCAAATTGAGTAGTTTCCCTTCCCTTGCATATAGTAAAACCGAAAAACCTTTAAAACACG-GG----------GTAAAATAAATGGC
gi|15 : ATT---TTTTTTTT-AAAAATTCTGT---------ACAGACAAGTACTCCCTCAGCCCTTAATGTTTCAACTGATCAGCCTT---TGCATA--CAGCTCT-TT---AGCAATTTCTTTGTACTACACAAATTT---ATCTTATGCTCATTTGC-AATTGTCAGCATGAATGTTTCTTTTTTCTTGTGTTTCTTGCTTTTACCGTGT-GACTTCAGG----------ACACTTTCTCCCATGGCTGTAATGTCTATCTTTTT-T---TACATACACTGCACCAAGCTTTCATGTTGT-TT--TGGGTT-------CATTGa
gi|15 : C---ATTG---ACTCACTTAT----AT-TAC---------------TATG-TGC-TT--TTAATAAAAAAAACATTGGGTTTCC-CCAGAT-GGTGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATactcacttatattactatgtgcttttaataaaaaaaacattgggtttccccagatggtgtcactagttcagaacacaggcagctgttcaaattc
gi|16 : attttttttttaaaaattctgtacagacaagtactccctcagcccttaatgtttcaactgatcagcctttgcatacagctctttagcaatttctttgtactacacaaatttatcttatgctcatttgcaattgtcagcatgaatgtttcttttttcttgtgtttcttgcttttaccgtgtgacttcaggacactttctcccatggctgtaatgtctatctttttttacatacactgcaccaagctttcatgttgttttgggttTTGTAAAACTGAGTAGTCTCCCTTCCCTTGCATAAAGTA-----------------AAACACA-GA----------GTAAAATAAATGGCAAATATGGACATTTCATATTCTCCGTTACTA--TTTTTT----------------------------------AAATTCAAACTCATTTTCGATGA--TTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAACACTATTCAAGGAGGTTTTAAAGAA-------ATAAGCACTTCTCATCTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTTtc
gi|17 : A----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCGCTGTTACTGT-TTTTTTAAATTCAA-----TACTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------GACTTT-----------TCCCTCT---GATATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGCGGCTGAAAATCAAGCACTTTTAAAATCCGT-GCAAACCT
gi|18 : CTCTGTTACTA--TTTTTTAAATTCA-----CT-CTTTT--------------AAATTCAAGCAC-TTTTCAAT-A-GTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---CACATT-AAAAAT-AAGCACTTTTCAAGGAGGTTTTTAAG-A-------ATAA-CACTTCTCATCCGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|19 : ATTT--TTTTTTTT-AAAAGTTCAG-TAGTTCAACACAAACAAATACTACCTC-GCCCCTAATGT--------------TTTAACTG-ATCAACC--TTT-TT---AGCGATTTCTTCGTACTGCACAAGTTT---TTCCTGTGTTCTTTTGTGA
gi|2 : aATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAATACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATTTTGTGCTCATTTGCGAATTGTCGGCATGGAAATTTCATTTTTCTTGTGTTTCTTGCTCTTTTTGTGC-GACTTCAGGGCTGAATA-CATACTTTTTCCGA-GGC---ATTGT-TATCCGTGTAT---TAC-TAC---------------CGTA-TGC-AT--TGGATA-------CATTGGGTTTCC-CCAAAT-GACGTCAATTGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCTCTTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATTTACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AT----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTACATATAGTA-----------------AAAC-CGAGA----------GTAAAATAAATGGCGAAGTTGGACATTTCATATTCTCTGTTATTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATAA-TTTTTGTT----CA-TTTTAAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAAGTACAATGTAAACACTCCTCATTTGAGAAGTTGAAAATCAAGCACTTTTTAAATCTGT-GCGAACCTTtaagcattagcttgttcaagaagttcccacttttttctgctttct
gi|20 : TG-TGT-TTGATAAAAA-------CATTGGCTTTCC-CCAGAT-GACATCACTAGTTTACAACACAGGCAGGTGTTCAAATTCATTTGATTATTTTCTCTGTATTTT-
gi|22 : gTGGGTTTCGACCGGATTGACGTCAC------AGAGCACA-GCAGCTGTTCGAATACATcg
gi|24 : ataaaaaaaatcGGCTGATTA-CACATTTCCCCGGA-GGC---ATTGT-TAT
gi|3 : ATTA--TTTTTTTT-ACACCTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGACCTTAATGT--------------CTT---TGCATC--CCATTTT-TTT--ACCTATGTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCAGCATGGACATTTCATTTT-CTTATGTTTCTTGCTCT-ATCGTGC-GACTTCAGGGCTGAATA--ACACTTTCTCCGA-GGC---ATTGT-TATCCATTTAT---TAC-TAT---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-C-AGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GA-------------TATTATCGGCAATTTTT-CTGCGTGGGTTATATCATGGGAGAATTACTTATCAACTACCTT---AA--GTTTATGC---AATTGTT---------TTGTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTCTTAAATTAGAACAGGTGCGCACTGGTTCACAGCATGCA-----GTGCTGCACACTACTACTGTGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAATACA-GG----------GTTAAATAAATGGCGAAGCTGGACATTTCATATTCTCCATTACGT--TTTTTTAAATTCAAA---CT-CTTTG--------------AAATTCATGCAT-TTTTTAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGCATGTTTTTAAGAA-------ATAAACACTTCTCATTTGAGAGGTTGAAAATCAAGCAGTTTTCACATCTGT-GCGAACC
gi|4 : --TTTTTTTT-ACAACTTCAATTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---AGCATC--CCATTTTTTT---ACCAATTTCTTTGTTCTCCACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTTGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGT---ATTGT-TATCCGTGTAT---TAC-CAC---------------CATG-TGC-GT--TGGATA-------CATTAAGTTTCC-CCAGTT-GACGTCACTAGTTCAGAACACAAGTAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGG-------------GG-------------TGTTATCGGC-ATTTTTTCTGCGCAAGTAAT-----GGGAGAATTATATATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTTCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGATACAGGTTTGTAAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGG-GA----------GTAAAATATATGGCGAAGCTGGACATTTCATATTCTCCGTTACTT--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAA-AAGCACTATTAAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAAGTTG-AAATCAAGCACTTTTCAAATCTGT-GCAAACCTTa
gi|5 : atatATTA--TTTTTTTTTACAGCGTCAGTTAGTTTCACATAGCCAAGAACTCCCCCAGCCCTTAATGT--------------ATT---TGCATC--ACATTTT-TT---ACCAATTACTTTGTTCTACACAAGTTT---ATATTGTGCTTATTTGAAAATTGTTGGCATGGACATTTAATT------GTGTTTCTCGGTCTTATCATGC-AACTACAGGGATGAATG-CACACTTTCTCCGA-AGC---ATTGT-TATCAGTTTAT---TAC-AAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CTAGAT-GACGTCAATAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTT-CTGCACAGGTTAT-----CGGAGA----TTTATCAACTGCGTT---AA--GTTTATGA---AATTGTT---------T-GTT-------T-------AG--------AC----------AACAACACAC----CAAATCTATTTCTAAAATTAGAACAGGTGCACACTGGTTTCCAGCATGCT-----GCACTGCACAATATTGCTGGGAAACAAATTTGTCAAATTGATTAGCCTCCTTTCTCTTGCATATAGTA-----------------AAACACA-TA----------GTAAAATAAATGGCGAAGACGGACATTTCATATTCTCAGTTACTG--TTTTTTAAATTCAAAAATCT--TTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGCATTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTG-AAATCAAGCACTTTTCAAATCTGA-GCGAACCTT
gi|6 : ATTA--TTTTTTT--ACAACATCAGTTAGTTTCACACAGC-AAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TTTTTACCAATTTCTTTCTACTACACAAGTTT---ATCCTGTGCTCATTTGCGAATTGTCGGCAGGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCTGTTTAT---TAC-GAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-TCATAT-GACGTCACTAGTTCAAGACACAAGCAGCTGTTAAATTGCATTTTGTTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTCTCGGCAATTTTT-CTTCGCGGGTTAT-----GGGAGAATTATTTATTAACTGCGTT---AA--GTTTGTGC---AATTGTT---------T-GTT-------T-------AG--------AC-------------AACACAC----CGTTTCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCGGCATGCT-----GCACTGCACAATACTGCTGGAAAACAGATTTGTCAAATTGAGTAGTCTTCCTTCTCTTGCATATAGTA-----------------AAACACA-GA----------GTAAAATAAATTGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGT-TTTGTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATTAAAAAAT-AAGCACTATTCAG--------TTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACATTTCAAATCTGT-GCGAAC
gi|7 : TTTATTT-ACAACTTAAGTAAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CAATTTT-T----ACCAATTTTTTTGTACTACACAAGTTTTTTATCTTGTGCTCATTTGCGAATTGTTGGCATGGATATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GGCTTCAGGGCTGAAAAACACACTTTGTTCGA-TGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--GGGATA-------CATTGGGTTTCC-TCAGAT-GACATCACCAGTT---AACACAAGCAACTGTTAAATTGCATTTGATTCTGTTCTTTGTATTTT-G-------------GG-------------TGTTATCAGCAATTTTT-CTGCGCAGGTTAA-----GGGAGAATTATTTATCAACTGCGTTTAAAA--GTTTATGC---AATTGTT---------T-GTA-------T-------AG--------AC----------GACAACACAC----CATGTTTATTTTTAAAATTAGAACAAGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCTCTTCTCTTGCATATAGTA-----------------AAACACA-GA----------GTAAA-------------ATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCAACT---GACATT-AAAAAT-AAGCACTATTCAAGGACGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAACCTGT-GCGAACCTT
gi|8 : atcaATTA--TTTTTTTT-ACAACT------AGTTTCACACAGCTAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTTTTT---ACCAATTTCTTTGTACTACGCAAGTTT---ATCTTGTGCTCATTTGCGAATCGTCGGCATGGACATTTCATTTTACTTGTGTTTCTGGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACACTTTCTCAGA-AGC---ATTGT-TATCCATTTAT---TAC-TACCAT------------CATG-TGCTTT--TGGATA-------CATTGGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTTATTCTGTTCTCTGTATTTT-G-------------GG-------------TATTATCGGCAA-TTTTTCTGCGCGGGTTAT-----GGGAGAAATATTTATCAACTGCGTT---AA--GTTTATGT---AATTGTT---------T-GTT-------T-------AG--------AC----------GTAAACACAA----CATATCTATTTTTAAAATAAGAACAGGTGC-------------------------GCACTGCACAATACTTCTTGGAAACAGGTTTGTCAAATTGAATAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGG-GA----------GTAAAATAAATGGCGACAATGGACATTTCATATTCTCTGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------ATATTAAAGCAC-TTTTCAATCA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GAAGTT-AAAAAT-AAGCACTTTTCAAGGATGTTTTCAAGAA-------ATAAGCACTTCCCATTTGAGAGGTTGAAAATCAGGCACTTTTCAAAAC-ATAGCGAACCT
gi|9 : ATTAATTTTTTTTT-AAAAGTTCAGTTAGTTTCACACAGCCC-TTAATGTTTCAGATC--AACAT----------------T---TGCATC--CAATTTT-TT-----------CTTTGTACAACACAAGTCT---ATCTTGTGCTTATTTGCGAATTGTCGGCATCGACGTTTCACTTTTCTTGTGTTTTTCAAACTTATCGTGC-TACTTCAGGGCTGAATA-CACACTTTCTTAGA-GGC---ATTGT-TATCCATTTAT---TGT-TAC---------------CATG-TGC-TT--TTGATAAAAA---CATTGGGTCTCC-CCAGAT-GACGTCACAAGTTCAGAATATAAGCA--------------TTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGGGTGTTTTCAGCAATTTTT-CTGTGCAGGTTAT-----AGGAGAATTAT-----------------------TTAT-C---A-------------------T-------T-------AG--------AC----------GACAACACAT----CGTATCTATTTTTAAA-TTAAAACAGGTGAACACTGGTTCTCAGCATGCT-----GCACTGCACAATACTGCTGATAAACAGATTCGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGGCATTTCATATTCTCCGTTACTATTTTTTTTAAGTTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-CTTTTGTT----TA-TTTTCAAGCACTTTTCAAGCACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACTTc
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGATATCAAGTTCTGGGATAGACTA
Unaligned ( gi|23 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
Alignments
lowQualScore : 33333333333333 222222222222222 2222222 1111111111111 3333333333333 1 111111111 111111111111111 11111111 1111111111 11111111111111111 1111111111 11111111111111 11111111111 11111111111
lowQualScore : 44 2 00000000000000 555 33 5 777 555 3 2 2 444 2 444 2 111111111111111 2 2 33 5555555 2 2 5 2 5555555555555 1111111111111 1 3 77777 555 33 555 3 111111111 2 666666666666666 00000000 2222222222 6666 1 77777 88888888888888888 2 1111111111 66 444 2 55555555555555 2 2 5555 2 22222222222 22222222222 444 2 2 9999999 2
lowQualScore : .. . .............. ... .. . ... ... . . . ... . ... . ............... . . .. ....... . . . . ............. ............. . . ..... ... .. ... . ......... . ............... ........ .......... .... . ..... ................. . .......... .. ... . .............. . . .... . ........... ........... ... . . ....... .
lowQualScore : 66 9 44444444444444 000 99 7 999 000 1 7 7 444 5 777 7 333333333333333 5 5 44 0000000 5 5 2 9 7777777777777 4444444444444 5 7 11111 000 99 000 2 444444444 9 999999999999999 44444444 5555555555 1111 1 11111 77777777777777777 9 7777777777 33 777 7 77777777777777 7 7 7777 7 77777777777 77777777777 777 7 7 3333333 9
consensus : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
Reference ( family-6898 ) : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|1 : ATTA--TTTTTTTT-ACAATGTCAGTTAGTTTCACACAGCCAAGTATTACCTCAGTT-TTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCTATTTCTTTGTACTGCACAAGTTT---ATCTTGTGCTCATTTGCAAATTGTTGGCATGGCCATTTCATTTTTCTTGTATTTCTCGCTCTGATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--CGACTA-------CATTGGGTTTCC-CCAGAT-GATGTCACTAGTTCAGAACAGAAGCAGCTGTTAAATTACATTTAATTCCGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAA-CTTTTCTGCACGGGTTAT-----GGGAGAATTATTAATCCACTGTGTT---CACGGGTTATGTGAGAATTATTAATCGACTGT-GTT-------A-------AGTTAATGCAACTGTATGTTTAGACGACA-ACTCTTCGTATCTATTTTTAAAATTAGAACAAATGTGCACTGGTTCCCAGCATACTGCACAGCACTGCACAATACTGCTGGGAAACAGATTGGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCAGAAATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCA------TTTTCAA----------------CACTTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGAACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGTACTTTTCAAATCTGT-GCGAACCT
gi|10 : TTTTTT-ACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTTAGCCCTTAATGTTTCAGACCAAC---CTT---TGCATA--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCT-ATTTGCAAATTGTCGGCATGGGCATTTAATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGC---ATTGT-TATCCGTTTAT---T------------------------------TT--TG-ATAAAAA---CATTCGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAT--TGCATTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGAGTGTTATCGGCAATTTTT-CTGCGCGGGTTAT-----GGGAGAATTATTTATCAGTTGTGTT---AA--CTTCAT-------------------------T-------A-------AG--------AC----------GACAACACAC----CGTACCTAATTTTAAAATTA----------GTACAGGT----------------------GCACA------CTGGGAAACAGATTTGTCAAACTGAGTAGTCGACCTTCTCTTGCATGTAGTA-----------------AAACACA-GA----------GTAAAATAAATGTTGAAGATGGACATTTCATATACTCCATTACTA--TTTTTAAAATTCAAA---CT-CTT----------------AATTTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTTTTAAGCATTTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGAATGTTTTTATGAA-------ATAAGCACTTTTCATTTGAGAGGCTGAAAACCAAGCACTTTTCAAATATGT-GCGAACCTT
gi|11 : --TTTTTTTT-TTAAC----GTCGGTTTCACACAACCAAGTACTCCCTCAGCCCTTAATGT--------------ATT---TGCATC--CCATTTT-TT---ACGAATTTCTTTGTACTACATAAGTTT---ATCTTGCGCTCATATGCGAACTGTTGGCAAGGACATTTCATTTTTCTTGTGTTTGTCGCTCTTATCGTTCCGACTTCAGGACTGAAAA-CACACTTTCTCCGA-GAC---ATTGC-TATCAGTTCAT---TAC-AAG---------------CATG-TGC-TT--TTGATA-------CATTGGGTTTCC-CCAA---GATGTCACTAGTTCAGAACACAAGCAGCTGTTAAA------TTGATTCCGTTCTC---ATTTT-G-------------GG-------------TGTTATTGACAATTTT-TCTGCGCGTGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------A-GTT-------T-------AG--------AC----------GACAATACAT----TGCATCTATTTGTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAGTACTGCTAGGAAACAGATTTGTCAAAT---------TCACTT------------GTA-----------------AAACA---GA----------GTAAAATAAATGGTGAAGATGGACATTTCATATTCTCCGTTCCTG--TTTTTTAAATTCAAG---CA-CTTTTCCCACTGACATTACAAAT--AAGCAC-TATTCAAGGA-TGTTT-TTAAGAAA-T----AAG-----------CAC--T-----------TCTCATTTGAGAAGTT-GAAAATCAAGCACTTTTCAA
gi|12 : ATTA--TTTT-TTT-ACAACTTCAGTTAGTTTCACACAGCCAAATATTCCCTCAGCCCTTAATGT--------------CTT---TGCCTC--CCAGTTT-TT---ACCAATTTCTTTGTACTACAGAAGTTT---ATCTTGTGCTCATTTGCGAATTG-------------------TTTCT---------CGCTCTTATCATGC-GACTTCACGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCCCTTTATTACTAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATTGGCAA-TTTTTCTGCGCGGGTTAT-----GGGA-AATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGGTTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAatctgtgcgaacct
gi|13 : -------------GG-------------TGTTGTCGGCAATTTT--CTGCGCGGGTTAT-----GGGATAATTATTTATCAACTGCGTT----------CATGC---A----TT---------T-GCT-------GGAGGAAAAG--------AT----------GAAAACACGC----CGTATCTATTTTCCAAATTAGAAGAGGTGCCCACTGGTTCCCAGCATATT-----GCACTTCACAATACTGCTGGGAATCAGATTTGTCAAACTGAGTAGTCTCCCTTCCCTTGCATATAGTA-----------------AAACACA-GAGTAAAACAGGGTAAAATAAATGGCAAATATGGACATTTCATATTCTCCTTTACTA--TTTTTTTAATTCAAA------CTTTT--------------AAATTCGACCTT-TCTTCAATGATTTTTTTTT----CA-TTTTCAAG-----------CACTTT-----------TCCTGCT---GATATT-AAATAT-AAGCACCATACAAGGAAGTTTTTAAGAA-------ATAAGCACTTCTCA---------TTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|14 : GCTGAATA-CACACTTTCCCAGA-GGC---ATTGT-CATCCATTTAT---TAC-TAC---------------TATG-TGC-TT--TTGATAAAAAA--CATTGGGTTTTC-CCAGAT-GGCGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATTCATTTGATCCT-TTCTCTGTATTTT-GGAAATGTCATAAAGG-------------TGTTATCGGCAATTTTTTTT-CGCTGGTTAG-----GGGAGAATTATTTACCAACTACAAT---AA--GTTTGTGC---A----TT---------T-GTTAGGGGAAA-------AG--------AT----------GAAAACATGC----TGTATCTATTTTTAAAATTAGAAGAGGTGCACACTGGTTCCCAGCATGAT-----GCACTGCACAATAATGCCGGAAAACAGATTTGTCAAATTGAGTAGTTTCCCTTCCCTTGCATATAGTAAAACCGAAAAACCTTTAAAACACG-GG----------GTAAAATAAATGGC
gi|15 : ATT---TTTTTTTT-AAAAATTCTGT---------ACAGACAAGTACTCCCTCAGCCCTTAATGTTTCAACTGATCAGCCTT---TGCATA--CAGCTCT-TT---AGCAATTTCTTTGTACTACACAAATTT---ATCTTATGCTCATTTGC-AATTGTCAGCATGAATGTTTCTTTTTTCTTGTGTTTCTTGCTTTTACCGTGT-GACTTCAGG----------ACACTTTCTCCCATGGCTGTAATGTCTATCTTTTT-T---TACATACACTGCACCAAGCTTTCATGTTGT-TT--TGGGTT-------CATTGa
gi|15 : C---ATTG---ACTCACTTAT----AT-TAC---------------TATG-TGC-TT--TTAATAAAAAAAACATTGGGTTTCC-CCAGAT-GGTGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATactcacttatattactatgtgcttttaataaaaaaaacattgggtttccccagatggtgtcactagttcagaacacaggcagctgttcaaattc
gi|16 : attttttttttaaaaattctgtacagacaagtactccctcagcccttaatgtttcaactgatcagcctttgcatacagctctttagcaatttctttgtactacacaaatttatcttatgctcatttgcaattgtcagcatgaatgtttcttttttcttgtgtttcttgcttttaccgtgtgacttcaggacactttctcccatggctgtaatgtctatctttttttacatacactgcaccaagctttcatgttgttttgggttTTGTAAAACTGAGTAGTCTCCCTTCCCTTGCATAAAGTA-----------------AAACACA-GA----------GTAAAATAAATGGCAAATATGGACATTTCATATTCTCCGTTACTA--TTTTTT----------------------------------AAATTCAAACTCATTTTCGATGA--TTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAACACTATTCAAGGAGGTTTTAAAGAA-------ATAAGCACTTCTCATCTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTTtc
gi|17 : A----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCGCTGTTACTGT-TTTTTTAAATTCAA-----TACTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------GACTTT-----------TCCCTCT---GATATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGCGGCTGAAAATCAAGCACTTTTAAAATCCGT-GCAAACCT
gi|18 : CTCTGTTACTA--TTTTTTAAATTCA-----CT-CTTTT--------------AAATTCAAGCAC-TTTTCAAT-A-GTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---CACATT-AAAAAT-AAGCACTTTTCAAGGAGGTTTTTAAG-A-------ATAA-CACTTCTCATCCGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|19 : ATTT--TTTTTTTT-AAAAGTTCAG-TAGTTCAACACAAACAAATACTACCTC-GCCCCTAATGT--------------TTTAACTG-ATCAACC--TTT-TT---AGCGATTTCTTCGTACTGCACAAGTTT---TTCCTGTGTTCTTTTGTGA
gi|2 : aATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAATACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATTTTGTGCTCATTTGCGAATTGTCGGCATGGAAATTTCATTTTTCTTGTGTTTCTTGCTCTTTTTGTGC-GACTTCAGGGCTGAATA-CATACTTTTTCCGA-GGC---ATTGT-TATCCGTGTAT---TAC-TAC---------------CGTA-TGC-AT--TGGATA-------CATTGGGTTTCC-CCAAAT-GACGTCAATTGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCTCTTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATTTACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AT----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTACATATAGTA-----------------AAAC-CGAGA----------GTAAAATAAATGGCGAAGTTGGACATTTCATATTCTCTGTTATTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATAA-TTTTTGTT----CA-TTTTAAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAAGTACAATGTAAACACTCCTCATTTGAGAAGTTGAAAATCAAGCACTTTTTAAATCTGT-GCGAACCTTtaagcattagcttgttcaagaagttcccacttttttctgctttct
gi|20 : TG-TGT-TTGATAAAAA-------CATTGGCTTTCC-CCAGAT-GACATCACTAGTTTACAACACAGGCAGGTGTTCAAATTCATTTGATTATTTTCTCTGTATTTT-
gi|22 : gTGGGTTTCGACCGGATTGACGTCAC------AGAGCACA-GCAGCTGTTCGAATACATcg
gi|24 : ataaaaaaaatcGGCTGATTA-CACATTTCCCCGGA-GGC---ATTGT-TAT
gi|3 : ATTA--TTTTTTTT-ACACCTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGACCTTAATGT--------------CTT---TGCATC--CCATTTT-TTT--ACCTATGTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCAGCATGGACATTTCATTTT-CTTATGTTTCTTGCTCT-ATCGTGC-GACTTCAGGGCTGAATA--ACACTTTCTCCGA-GGC---ATTGT-TATCCATTTAT---TAC-TAT---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-C-AGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GA-------------TATTATCGGCAATTTTT-CTGCGTGGGTTATATCATGGGAGAATTACTTATCAACTACCTT---AA--GTTTATGC---AATTGTT---------TTGTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTCTTAAATTAGAACAGGTGCGCACTGGTTCACAGCATGCA-----GTGCTGCACACTACTACTGTGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAATACA-GG----------GTTAAATAAATGGCGAAGCTGGACATTTCATATTCTCCATTACGT--TTTTTTAAATTCAAA---CT-CTTTG--------------AAATTCATGCAT-TTTTTAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGCATGTTTTTAAGAA-------ATAAACACTTCTCATTTGAGAGGTTGAAAATCAAGCAGTTTTCACATCTGT-GCGAACC
gi|4 : --TTTTTTTT-ACAACTTCAATTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---AGCATC--CCATTTTTTT---ACCAATTTCTTTGTTCTCCACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTTGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGT---ATTGT-TATCCGTGTAT---TAC-CAC---------------CATG-TGC-GT--TGGATA-------CATTAAGTTTCC-CCAGTT-GACGTCACTAGTTCAGAACACAAGTAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGG-------------GG-------------TGTTATCGGC-ATTTTTTCTGCGCAAGTAAT-----GGGAGAATTATATATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTTCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGATACAGGTTTGTAAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGG-GA----------GTAAAATATATGGCGAAGCTGGACATTTCATATTCTCCGTTACTT--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAA-AAGCACTATTAAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAAGTTG-AAATCAAGCACTTTTCAAATCTGT-GCAAACCTTa
gi|5 : atatATTA--TTTTTTTTTACAGCGTCAGTTAGTTTCACATAGCCAAGAACTCCCCCAGCCCTTAATGT--------------ATT---TGCATC--ACATTTT-TT---ACCAATTACTTTGTTCTACACAAGTTT---ATATTGTGCTTATTTGAAAATTGTTGGCATGGACATTTAATT------GTGTTTCTCGGTCTTATCATGC-AACTACAGGGATGAATG-CACACTTTCTCCGA-AGC---ATTGT-TATCAGTTTAT---TAC-AAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CTAGAT-GACGTCAATAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTT-CTGCACAGGTTAT-----CGGAGA----TTTATCAACTGCGTT---AA--GTTTATGA---AATTGTT---------T-GTT-------T-------AG--------AC----------AACAACACAC----CAAATCTATTTCTAAAATTAGAACAGGTGCACACTGGTTTCCAGCATGCT-----GCACTGCACAATATTGCTGGGAAACAAATTTGTCAAATTGATTAGCCTCCTTTCTCTTGCATATAGTA-----------------AAACACA-TA----------GTAAAATAAATGGCGAAGACGGACATTTCATATTCTCAGTTACTG--TTTTTTAAATTCAAAAATCT--TTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGCATTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTG-AAATCAAGCACTTTTCAAATCTGA-GCGAACCTT
gi|6 : ATTA--TTTTTTT--ACAACATCAGTTAGTTTCACACAGC-AAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TTTTTACCAATTTCTTTCTACTACACAAGTTT---ATCCTGTGCTCATTTGCGAATTGTCGGCAGGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCTGTTTAT---TAC-GAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-TCATAT-GACGTCACTAGTTCAAGACACAAGCAGCTGTTAAATTGCATTTTGTTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTCTCGGCAATTTTT-CTTCGCGGGTTAT-----GGGAGAATTATTTATTAACTGCGTT---AA--GTTTGTGC---AATTGTT---------T-GTT-------T-------AG--------AC-------------AACACAC----CGTTTCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCGGCATGCT-----GCACTGCACAATACTGCTGGAAAACAGATTTGTCAAATTGAGTAGTCTTCCTTCTCTTGCATATAGTA-----------------AAACACA-GA----------GTAAAATAAATTGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGT-TTTGTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATTAAAAAAT-AAGCACTATTCAG--------TTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACATTTCAAATCTGT-GCGAAC
gi|7 : TTTATTT-ACAACTTAAGTAAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CAATTTT-T----ACCAATTTTTTTGTACTACACAAGTTTTTTATCTTGTGCTCATTTGCGAATTGTTGGCATGGATATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GGCTTCAGGGCTGAAAAACACACTTTGTTCGA-TGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--GGGATA-------CATTGGGTTTCC-TCAGAT-GACATCACCAGTT---AACACAAGCAACTGTTAAATTGCATTTGATTCTGTTCTTTGTATTTT-G-------------GG-------------TGTTATCAGCAATTTTT-CTGCGCAGGTTAA-----GGGAGAATTATTTATCAACTGCGTTTAAAA--GTTTATGC---AATTGTT---------T-GTA-------T-------AG--------AC----------GACAACACAC----CATGTTTATTTTTAAAATTAGAACAAGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCTCTTCTCTTGCATATAGTA-----------------AAACACA-GA----------GTAAA-------------ATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCAACT---GACATT-AAAAAT-AAGCACTATTCAAGGACGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAACCTGT-GCGAACCTT
gi|8 : atcaATTA--TTTTTTTT-ACAACT------AGTTTCACACAGCTAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTTTTT---ACCAATTTCTTTGTACTACGCAAGTTT---ATCTTGTGCTCATTTGCGAATCGTCGGCATGGACATTTCATTTTACTTGTGTTTCTGGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACACTTTCTCAGA-AGC---ATTGT-TATCCATTTAT---TAC-TACCAT------------CATG-TGCTTT--TGGATA-------CATTGGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTTATTCTGTTCTCTGTATTTT-G-------------GG-------------TATTATCGGCAA-TTTTTCTGCGCGGGTTAT-----GGGAGAAATATTTATCAACTGCGTT---AA--GTTTATGT---AATTGTT---------T-GTT-------T-------AG--------AC----------GTAAACACAA----CATATCTATTTTTAAAATAAGAACAGGTGC-------------------------GCACTGCACAATACTTCTTGGAAACAGGTTTGTCAAATTGAATAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGG-GA----------GTAAAATAAATGGCGACAATGGACATTTCATATTCTCTGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------ATATTAAAGCAC-TTTTCAATCA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GAAGTT-AAAAAT-AAGCACTTTTCAAGGATGTTTTCAAGAA-------ATAAGCACTTCCCATTTGAGAGGTTGAAAATCAGGCACTTTTCAAAAC-ATAGCGAACCT
gi|9 : ATTAATTTTTTTTT-AAAAGTTCAGTTAGTTTCACACAGCCC-TTAATGTTTCAGATC--AACAT----------------T---TGCATC--CAATTTT-TT-----------CTTTGTACAACACAAGTCT---ATCTTGTGCTTATTTGCGAATTGTCGGCATCGACGTTTCACTTTTCTTGTGTTTTTCAAACTTATCGTGC-TACTTCAGGGCTGAATA-CACACTTTCTTAGA-GGC---ATTGT-TATCCATTTAT---TGT-TAC---------------CATG-TGC-TT--TTGATAAAAA---CATTGGGTCTCC-CCAGAT-GACGTCACAAGTTCAGAATATAAGCA--------------TTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGGGTGTTTTCAGCAATTTTT-CTGTGCAGGTTAT-----AGGAGAATTAT-----------------------TTAT-C---A-------------------T-------T-------AG--------AC----------GACAACACAT----CGTATCTATTTTTAAA-TTAAAACAGGTGAACACTGGTTCTCAGCATGCT-----GCACTGCACAATACTGCTGATAAACAGATTCGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGGCATTTCATATTCTCCGTTACTATTTTTTTTAAGTTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-CTTTTGTT----TA-TTTTCAAGCACTTTTCAAGCACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACTTc
blockSeqs : AT T TTCAACTGATCAGC AAC AA T TTT TTT C A T TGT C TAC A ACTGCACCAAGCTTT T T GA AAAAAAA A T A G GAAATGTCATAAA GTTGTCAAAAGAG T T ATCAT TAA . . A . T GGAGGAAA . . . G . AAACCGAAAAACCTTTA A GTAAAACAGG TT AAT A CCCACTGACATTAC A T AAGA . CACTTTTCAAG TTAAGCATTTT TGA A C GTACAAT A
blockSeqs : . . TTCAGACCAAC . . T T . . . . . . . . CAT . . . AAAAA . . A . . GTTGTCAAAAGGG T T . . . . A . . AGGGGAAA . . . G . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . AAAA . . A . . . T T . . . . A . . A . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . AAAA . . A . . . T T . . . . A . . T . . . C . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . A . . . T T . . . . A . . T . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . A . . . T T . . . . A . . T . . . G . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . T . . . T . . . . . A . . T . . . G . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . A . . . T . . . . . A . . T . . . G . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . T . . . T . . . . . A . . T . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . T . . . T . . . . . . . . T . . . G . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . T . . . T . . . . . . . . T . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . T . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqCons : ** *** ********* ******** ********** **** *****
originalCons : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
finalCons : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGATATCAAGTTCTGGGATAGACTA
Unaligned ( gi|23 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
Alignments
lowQualScore : 33333333333333 222222222222222 2222222 1111111111111 3333333333333 1 111111111 111111111111111 11111111 1111111111 11111111111111111 1111111111 11111111111111 11111111111 11111111111
lowQualScore : 44 2 00000000000000 555 33 5 777 555 3 2 2 444 2 444 2 111111111111111 2 2 33 5555555 2 2 5 2 5555555555555 1111111111111 1 3 77777 555 33 555 3 111111111 2 666666666666666 00000000 2222222222 6666 1 77777 88888888888888888 2 1111111111 66 444 2 55555555555555 2 2 5555 2 22222222222 22222222222 444 2 2 9999999 2
lowQualScore : .. . .............. ... .. . ... ... . . . ... . ... . ............... . . .. ....... . . . . ............. ............. . . ..... ... .. ... . ......... . ............... ........ .......... .... . ..... ................. . .......... .. ... . .............. . . .... . ........... ........... ... . . ....... .
lowQualScore : 66 9 44444444444444 000 99 7 999 000 1 7 7 444 5 777 7 333333333333333 5 5 44 0000000 5 5 2 9 7777777777777 4444444444444 5 7 11111 000 99 000 2 444444444 9 999999999999999 44444444 5555555555 1111 1 11111 77777777777777777 9 7777777777 33 777 7 77777777777777 7 7 7777 7 77777777777 77777777777 777 7 7 3333333 9
consensus : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
Reference ( family-6898 ) : ATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|1 : ATTA--TTTTTTTT-ACAATGTCAGTTAGTTTCACACAGCCAAGTATTACCTCAGTT-TTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCTATTTCTTTGTACTGCACAAGTTT---ATCTTGTGCTCATTTGCAAATTGTTGGCATGGCCATTTCATTTTTCTTGTATTTCTCGCTCTGATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCGA-GGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--CGACTA-------CATTGGGTTTCC-CCAGAT-GATGTCACTAGTTCAGAACAGAAGCAGCTGTTAAATTACATTTAATTCCGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAA-CTTTTCTGCACGGGTTAT-----GGGAGAATTATTAATCCACTGTGTT---CACGGGTTATGTGAGAATTATTAATCGACTGT-GTT-------A-------AGTTAATGCAACTGTATGTTTAGACGACA-ACTCTTCGTATCTATTTTTAAAATTAGAACAAATGTGCACTGGTTCCCAGCATACTGCACAGCACTGCACAATACTGCTGGGAAACAGATTGGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCAGAAATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCA------TTTTCAA----------------CACTTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGAACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGTACTTTTCAAATCTGT-GCGAACCT
gi|10 : TTTTTT-ACAAGTTCAGTTAGTTTCACACAGCCAAGTACTCCCTTAGCCCTTAATGTTTCAGACCAAC---CTT---TGCATA--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATCTTGTGCT-ATTTGCAAATTGTCGGCATGGGCATTTAATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGC---ATTGT-TATCCGTTTAT---T------------------------------TT--TG-ATAAAAA---CATTCGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAT--TGCATTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGAGTGTTATCGGCAATTTTT-CTGCGCGGGTTAT-----GGGAGAATTATTTATCAGTTGTGTT---AA--CTTCAT-------------------------T-------A-------AG--------AC----------GACAACACAC----CGTACCTAATTTTAAAATTA----------GTACAGGT----------------------GCACA------CTGGGAAACAGATTTGTCAAACTGAGTAGTCGACCTTCTCTTGCATGTAGTA-----------------AAACACA-GA----------GTAAAATAAATGTTGAAGATGGACATTTCATATACTCCATTACTA--TTTTTAAAATTCAAA---CT-CTT----------------AATTTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTTTTAAGCATTTTTCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGAATGTTTTTATGAA-------ATAAGCACTTTTCATTTGAGAGGCTGAAAACCAAGCACTTTTCAAATATGT-GCGAACCTT
gi|11 : --TTTTTTTT-TTAAC----GTCGGTTTCACACAACCAAGTACTCCCTCAGCCCTTAATGT--------------ATT---TGCATC--CCATTTT-TT---ACGAATTTCTTTGTACTACATAAGTTT---ATCTTGCGCTCATATGCGAACTGTTGGCAAGGACATTTCATTTTTCTTGTGTTTGTCGCTCTTATCGTTCCGACTTCAGGACTGAAAA-CACACTTTCTCCGA-GAC---ATTGC-TATCAGTTCAT---TAC-AAG---------------CATG-TGC-TT--TTGATA-------CATTGGGTTTCC-CCAA---GATGTCACTAGTTCAGAACACAAGCAGCTGTTAAA------TTGATTCCGTTCTC---ATTTT-G-------------GG-------------TGTTATTGACAATTTT-TCTGCGCGTGTTAT-----GGGAGAATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------A-GTT-------T-------AG--------AC----------GACAATACAT----TGCATCTATTTGTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAGTACTGCTAGGAAACAGATTTGTCAAAT---------TCACTT------------GTA-----------------AAACA---GA----------GTAAAATAAATGGTGAAGATGGACATTTCATATTCTCCGTTCCTG--TTTTTTAAATTCAAG---CA-CTTTTCCCACTGACATTACAAAT--AAGCAC-TATTCAAGGA-TGTTT-TTAAGAAA-T----AAG-----------CAC--T-----------TCTCATTTGAGAAGTT-GAAAATCAAGCACTTTTCAA
gi|12 : ATTA--TTTT-TTT-ACAACTTCAGTTAGTTTCACACAGCCAAATATTCCCTCAGCCCTTAATGT--------------CTT---TGCCTC--CCAGTTT-TT---ACCAATTTCTTTGTACTACAGAAGTTT---ATCTTGTGCTCATTTGCGAATTG-------------------TTTCT---------CGCTCTTATCATGC-GACTTCACGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCCCTTTATTACTAC-TAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CCAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATTGGCAA-TTTTTCTGCGCGGGTTAT-----GGGA-AATTATTTATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGGTTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAatctgtgcgaacct
gi|13 : -------------GG-------------TGTTGTCGGCAATTTT--CTGCGCGGGTTAT-----GGGATAATTATTTATCAACTGCGTT----------CATGC---A----TT---------T-GCT-------GGAGGAAAAG--------AT----------GAAAACACGC----CGTATCTATTTTCCAAATTAGAAGAGGTGCCCACTGGTTCCCAGCATATT-----GCACTTCACAATACTGCTGGGAATCAGATTTGTCAAACTGAGTAGTCTCCCTTCCCTTGCATATAGTA-----------------AAACACA-GAGTAAAACAGGGTAAAATAAATGGCAAATATGGACATTTCATATTCTCCTTTACTA--TTTTTTTAATTCAAA------CTTTT--------------AAATTCGACCTT-TCTTCAATGATTTTTTTTT----CA-TTTTCAAG-----------CACTTT-----------TCCTGCT---GATATT-AAATAT-AAGCACCATACAAGGAAGTTTTTAAGAA-------ATAAGCACTTCTCA---------TTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|14 : GCTGAATA-CACACTTTCCCAGA-GGC---ATTGT-CATCCATTTAT---TAC-TAC---------------TATG-TGC-TT--TTGATAAAAAA--CATTGGGTTTTC-CCAGAT-GGCGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATTCATTTGATCCT-TTCTCTGTATTTT-GGAAATGTCATAAAGG-------------TGTTATCGGCAATTTTTTTT-CGCTGGTTAG-----GGGAGAATTATTTACCAACTACAAT---AA--GTTTGTGC---A----TT---------T-GTTAGGGGAAA-------AG--------AT----------GAAAACATGC----TGTATCTATTTTTAAAATTAGAAGAGGTGCACACTGGTTCCCAGCATGAT-----GCACTGCACAATAATGCCGGAAAACAGATTTGTCAAATTGAGTAGTTTCCCTTCCCTTGCATATAGTAAAACCGAAAAACCTTTAAAACACG-GG----------GTAAAATAAATGGC
gi|15 : ATT---TTTTTTTT-AAAAATTCTGT---------ACAGACAAGTACTCCCTCAGCCCTTAATGTTTCAACTGATCAGCCTT---TGCATA--CAGCTCT-TT---AGCAATTTCTTTGTACTACACAAATTT---ATCTTATGCTCATTTGC-AATTGTCAGCATGAATGTTTCTTTTTTCTTGTGTTTCTTGCTTTTACCGTGT-GACTTCAGG----------ACACTTTCTCCCATGGCTGTAATGTCTATCTTTTT-T---TACATACACTGCACCAAGCTTTCATGTTGT-TT--TGGGTT-------CATTGa
gi|15 : C---ATTG---ACTCACTTAT----AT-TAC---------------TATG-TGC-TT--TTAATAAAAAAAACATTGGGTTTCC-CCAGAT-GGTGTCACTAGTTCAGAACACAGGCAGCTGTTCAAATactcacttatattactatgtgcttttaataaaaaaaacattgggtttccccagatggtgtcactagttcagaacacaggcagctgttcaaattc
gi|16 : attttttttttaaaaattctgtacagacaagtactccctcagcccttaatgtttcaactgatcagcctttgcatacagctctttagcaatttctttgtactacacaaatttatcttatgctcatttgcaattgtcagcatgaatgtttcttttttcttgtgtttcttgcttttaccgtgtgacttcaggacactttctcccatggctgtaatgtctatctttttttacatacactgcaccaagctttcatgttgttttgggttTTGTAAAACTGAGTAGTCTCCCTTCCCTTGCATAAAGTA-----------------AAACACA-GA----------GTAAAATAAATGGCAAATATGGACATTTCATATTCTCCGTTACTA--TTTTTT----------------------------------AAATTCAAACTCATTTTCGATGA--TTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAACACTATTCAAGGAGGTTTTAAAGAA-------ATAAGCACTTCTCATCTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTTtc
gi|17 : A----------GTAAAATAAATGGCGAAGATGGACATTTCATATTCGCTGTTACTGT-TTTTTTAAATTCAA-----TACTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------GACTTT-----------TCCCTCT---GATATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGCGGCTGAAAATCAAGCACTTTTAAAATCCGT-GCAAACCT
gi|18 : CTCTGTTACTA--TTTTTTAAATTCA-----CT-CTTTT--------------AAATTCAAGCAC-TTTTCAAT-A-GTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---CACATT-AAAAAT-AAGCACTTTTCAAGGAGGTTTTTAAG-A-------ATAA-CACTTCTCATCCGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACCTT
gi|19 : ATTT--TTTTTTTT-AAAAGTTCAG-TAGTTCAACACAAACAAATACTACCTC-GCCCCTAATGT--------------TTTAACTG-ATCAACC--TTT-TT---AGCGATTTCTTCGTACTGCACAAGTTT---TTCCTGTGTTCTTTTGTGA
gi|2 : aATTA--TTTTTTTT-ACAACTTCAGTTAGTTTCACACAGCCAAATACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TT---ACCAATTTCTTTGTACTACACAAGTTT---ATTTTGTGCTCATTTGCGAATTGTCGGCATGGAAATTTCATTTTTCTTGTGTTTCTTGCTCTTTTTGTGC-GACTTCAGGGCTGAATA-CATACTTTTTCCGA-GGC---ATTGT-TATCCGTGTAT---TAC-TAC---------------CGTA-TGC-AT--TGGATA-------CATTGGGTTTCC-CCAAAT-GACGTCAATTGTTCAGAACACAAGCAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCTCTTTTTTCTGCGCGGGTTAT-----GGGAGAATTATTTATTTACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AT----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTACATATAGTA-----------------AAAC-CGAGA----------GTAAAATAAATGGCGAAGTTGGACATTTCATATTCTCTGTTATTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATAA-TTTTTGTT----CA-TTTTAAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAAGTACAATGTAAACACTCCTCATTTGAGAAGTTGAAAATCAAGCACTTTTTAAATCTGT-GCGAACCTTtaagcattagcttgttcaagaagttcccacttttttctgctttct
gi|20 : TG-TGT-TTGATAAAAA-------CATTGGCTTTCC-CCAGAT-GACATCACTAGTTTACAACACAGGCAGGTGTTCAAATTCATTTGATTATTTTCTCTGTATTTT-
gi|22 : gTGGGTTTCGACCGGATTGACGTCAC------AGAGCACA-GCAGCTGTTCGAATACATcg
gi|24 : ataaaaaaaatcGGCTGATTA-CACATTTCCCCGGA-GGC---ATTGT-TAT
gi|3 : ATTA--TTTTTTTT-ACACCTTCAGTTAGTTTCACACAGCCAAGTACTCCCTCAGACCTTAATGT--------------CTT---TGCATC--CCATTTT-TTT--ACCTATGTCTTTGTACTACACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCAGCATGGACATTTCATTTT-CTTATGTTTCTTGCTCT-ATCGTGC-GACTTCAGGGCTGAATA--ACACTTTCTCCGA-GGC---ATTGT-TATCCATTTAT---TAC-TAT---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-C-AGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GA-------------TATTATCGGCAATTTTT-CTGCGTGGGTTATATCATGGGAGAATTACTTATCAACTACCTT---AA--GTTTATGC---AATTGTT---------TTGTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTCTTAAATTAGAACAGGTGCGCACTGGTTCACAGCATGCA-----GTGCTGCACACTACTACTGTGAAATAGATTTGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAATACA-GG----------GTTAAATAAATGGCGAAGCTGGACATTTCATATTCTCCATTACGT--TTTTTTAAATTCAAA---CT-CTTTG--------------AAATTCATGCAT-TTTTTAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGCATGTTTTTAAGAA-------ATAAACACTTCTCATTTGAGAGGTTGAAAATCAAGCAGTTTTCACATCTGT-GCGAACC
gi|4 : --TTTTTTTT-ACAACTTCAATTAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---AGCATC--CCATTTTTTT---ACCAATTTCTTTGTTCTCCACAAGTTT---ATCTTGTGCTCATTTGCGAATTGTCGGCATGGACATTTCATTTTTCTTGTGTTTCTTGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACATTTTCTCCAA-GGT---ATTGT-TATCCGTGTAT---TAC-CAC---------------CATG-TGC-GT--TGGATA-------CATTAAGTTTCC-CCAGTT-GACGTCACTAGTTCAGAACACAAGTAGCTGTTAAAATGCATTTGATTCTGTTCTCTGTATTTTGG-------------GG-------------TGTTATCGGC-ATTTTTTCTGCGCAAGTAAT-----GGGAGAATTATATATCAACTGCGTT---AA--GTTTATGC---AATTGTT---------T-GTT-------T-------AG--------AC----------GACAACACAC----CGTATCTATTTTTAAAATTAGAACAGGTTCGCACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGATACAGGTTTGTAAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGG-GA----------GTAAAATATATGGCGAAGCTGGACATTTCATATTCTCCGTTACTT--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAA-AAGCACTATTAAAGGATGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAAGTTG-AAATCAAGCACTTTTCAAATCTGT-GCAAACCTTa
gi|5 : atatATTA--TTTTTTTTTACAGCGTCAGTTAGTTTCACATAGCCAAGAACTCCCCCAGCCCTTAATGT--------------ATT---TGCATC--ACATTTT-TT---ACCAATTACTTTGTTCTACACAAGTTT---ATATTGTGCTTATTTGAAAATTGTTGGCATGGACATTTAATT------GTGTTTCTCGGTCTTATCATGC-AACTACAGGGATGAATG-CACACTTTCTCCGA-AGC---ATTGT-TATCAGTTTAT---TAC-AAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-CTAGAT-GACGTCAATAGTTCAGAACACAAGCAGCTGTTAAATTGCATTTGATTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTATCGGCAATTTTT-CTGCACAGGTTAT-----CGGAGA----TTTATCAACTGCGTT---AA--GTTTATGA---AATTGTT---------T-GTT-------T-------AG--------AC----------AACAACACAC----CAAATCTATTTCTAAAATTAGAACAGGTGCACACTGGTTTCCAGCATGCT-----GCACTGCACAATATTGCTGGGAAACAAATTTGTCAAATTGATTAGCCTCCTTTCTCTTGCATATAGTA-----------------AAACACA-TA----------GTAAAATAAATGGCGAAGACGGACATTTCATATTCTCAGTTACTG--TTTTTTAAATTCAAAAATCT--TTTT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGCATTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTG-AAATCAAGCACTTTTCAAATCTGA-GCGAACCTT
gi|6 : ATTA--TTTTTTT--ACAACATCAGTTAGTTTCACACAGC-AAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTT-TTTTTACCAATTTCTTTCTACTACACAAGTTT---ATCCTGTGCTCATTTGCGAATTGTCGGCAGGGACATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GACTTCAGGGCTGAATA-CACACTTTCTCCAA-GGC---ATTGT-TATCTGTTTAT---TAC-GAC---------------CATG-TGC-TT--TGGATA-------CATTGGGTTTCC-TCATAT-GACGTCACTAGTTCAAGACACAAGCAGCTGTTAAATTGCATTTTGTTCTGTTCTCTGTATTTT-G-------------GG-------------TGTTCTCGGCAATTTTT-CTTCGCGGGTTAT-----GGGAGAATTATTTATTAACTGCGTT---AA--GTTTGTGC---AATTGTT---------T-GTT-------T-------AG--------AC-------------AACACAC----CGTTTCTATTTTTAAAATTAGAACAGGTGCGCACTGGTTCCCGGCATGCT-----GCACTGCACAATACTGCTGGAAAACAGATTTGTCAAATTGAGTAGTCTTCCTTCTCTTGCATATAGTA-----------------AAACACA-GA----------GTAAAATAAATTGCGAAGATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------AAATTCAAGCAC-TTTTCAATGT-TTTGTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GACATTAAAAAAT-AAGCACTATTCAG--------TTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACATTTCAAATCTGT-GCGAAC
gi|7 : TTTATTT-ACAACTTAAGTAAGTTTCACACAGCCAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CAATTTT-T----ACCAATTTTTTTGTACTACACAAGTTTTTTATCTTGTGCTCATTTGCGAATTGTTGGCATGGATATTTCATTTTTCTTGTGTTTCTCGCTCTTATCGTGC-GGCTTCAGGGCTGAAAAACACACTTTGTTCGA-TGC---ATTGT-TATCCGTTTAT---TAC-TAC---------------CATG-TGC-TT--GGGATA-------CATTGGGTTTCC-TCAGAT-GACATCACCAGTT---AACACAAGCAACTGTTAAATTGCATTTGATTCTGTTCTTTGTATTTT-G-------------GG-------------TGTTATCAGCAATTTTT-CTGCGCAGGTTAA-----GGGAGAATTATTTATCAACTGCGTTTAAAA--GTTTATGC---AATTGTT---------T-GTA-------T-------AG--------AC----------GACAACACAC----CATGTTTATTTTTAAAATTAGAACAAGTGCACACTGGTTCCCAGCATGCT-----GCACTGCACAATACTGCTGGGAAACAGATTTGTCAAATTGAGTAGTCTCTCTTCTCTTGCATATAGTA-----------------AAACACA-GA----------GTAAA-------------ATGGACATTTCATATTCTCCGTTACTG--TTTTTTAAATTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCAACT---GACATT-AAAAAT-AAGCACTATTCAAGGACGTTTTTAAGAA-------ATAAGCACTTCTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAACCTGT-GCGAACCTT
gi|8 : atcaATTA--TTTTTTTT-ACAACT------AGTTTCACACAGCTAAGTACTCCCTCAGCCCTTAATGT--------------CTT---TGCATC--CCATTTTTTT---ACCAATTTCTTTGTACTACGCAAGTTT---ATCTTGTGCTCATTTGCGAATCGTCGGCATGGACATTTCATTTTACTTGTGTTTCTGGCTCTTATTGTGC-AACTTCAGGGCTGAATA-CACACTTTCTCAGA-AGC---ATTGT-TATCCATTTAT---TAC-TACCAT------------CATG-TGCTTT--TGGATA-------CATTGGGTTTCC-CAAGAT-GACGTCACTAGTTCAGAACACAAGCAGCTGTTAAAATGCATTTTATTCTGTTCTCTGTATTTT-G-------------GG-------------TATTATCGGCAA-TTTTTCTGCGCGGGTTAT-----GGGAGAAATATTTATCAACTGCGTT---AA--GTTTATGT---AATTGTT---------T-GTT-------T-------AG--------AC----------GTAAACACAA----CATATCTATTTTTAAAATAAGAACAGGTGC-------------------------GCACTGCACAATACTTCTTGGAAACAGGTTTGTCAAATTGAATAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACAGG-GA----------GTAAAATAAATGGCGACAATGGACATTTCATATTCTCTGTTACTG--TTTTTTAAATTCAAA---CT-CTTTT--------------ATATTAAAGCAC-TTTTCAATCA-TTTTTGTT----CA-TTTTCAAG-----------CACTTT-----------TCCCACT---GAAGTT-AAAAAT-AAGCACTTTTCAAGGATGTTTTCAAGAA-------ATAAGCACTTCCCATTTGAGAGGTTGAAAATCAGGCACTTTTCAAAAC-ATAGCGAACCT
gi|9 : ATTAATTTTTTTTT-AAAAGTTCAGTTAGTTTCACACAGCCC-TTAATGTTTCAGATC--AACAT----------------T---TGCATC--CAATTTT-TT-----------CTTTGTACAACACAAGTCT---ATCTTGTGCTTATTTGCGAATTGTCGGCATCGACGTTTCACTTTTCTTGTGTTTTTCAAACTTATCGTGC-TACTTCAGGGCTGAATA-CACACTTTCTTAGA-GGC---ATTGT-TATCCATTTAT---TGT-TAC---------------CATG-TGC-TT--TTGATAAAAA---CATTGGGTCTCC-CCAGAT-GACGTCACAAGTTCAGAATATAAGCA--------------TTTGATTCTGTTCTCTGTATTTT-G-------------GGGTTGTCAAAAGGGTGTTTTCAGCAATTTTT-CTGTGCAGGTTAT-----AGGAGAATTAT-----------------------TTAT-C---A-------------------T-------T-------AG--------AC----------GACAACACAT----CGTATCTATTTTTAAA-TTAAAACAGGTGAACACTGGTTCTCAGCATGCT-----GCACTGCACAATACTGCTGATAAACAGATTCGTCAAATTGAGTAGTCTCCCTTCTCTTGCATATAGTA-----------------AAACACG-GA----------GTAAAATAAATGGCGAAGATGGGCATTTCATATTCTCCGTTACTATTTTTTTTAAGTTCAAA---CT-C--TT--------------AAATTCAAGCAC-TTTTCAATGA-CTTTTGTT----TA-TTTTCAAGCACTTTTCAAGCACTTT-----------TCCCACT---GACATT-AAAAAT-AAGCACTATTCAAGGATGTTTTTAAGAA-------ATAAGCACTTTTCATTTGAGAGGTTGAAAATCAAGCACTTTTCAAATCTGT-GCGAACTTc
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGATATCAAGTTCTGGGATAGACTA
Unaligned ( gi|23 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA