lowQualScore : 11 1111111 2 1 11 6666666666666666 333333 666666666666666666666666666666 11 11 22222222222 11 55555555555555555555555555555555 444444444444444444 1111 1111 11111111 2222222222 1 1111 33333 11111111 222222 1 222 1 11 222222222222222222222222 22222 333333333333333 11111111111111111 222222222222222222222222 11111111111 1 1 222222 66666666666666666666666666666666666666666 66666666666 222
lowQualScore : 99 0 8 9999999 4 0 4 4 4 4 8 3 4 4 00 0000000000000000 4 999999 1 3 555555555555555555555555555555 5 00 9999 33 1 00000000000 55 33333333333333333333333333333333 66 000000000000000000 7777 0 55 0 2 7777 33333333 2222222222 5 2 2222 4 2 77777 00000000 5 44 66 3 3 444 2 333333 55 3 3 0 8 7 4 444 8 3 44 3 6 66 666666666666666666666666 22 77 2 0 22222 2 33 444 888888888888888 555 33 77 88 77777777777777777 444 555555555555555555555555 22222222222 8 888888888 33 5 4 0 33 3 000000 33 77777777777777777777777777777777777777777 5 33 66666 66666666666 2 2 2 2 9 3 1 888
lowQualScore : .. . . ....... . . . . . . . . . . .. ................ . ...... . . .............................. . .. .... .. . ........... .. ................................ .. .................. .... . .. . . .... ........ .......... . . .... . . ..... ........ . .. .. . . ... . ...... .. . . . . . . ... . . .. . . .. ........................ .. .. . . ..... . .. ... ............... ... .. .. .. ................. ... ........................ ........... . ......... .. . . . .. . ...... .. ......................................... . .. ..... ........... . . . . . . . ...
lowQualScore : 00 1 0 1111111 5 0 0 0 0 0 0 3 4 4 66 3333333333333333 4 666666 0 7 888888888888888888888888888888 2 00 7777 44 1 44444444444 22 88888888888888888888888888888888 11 333333333333333333 5555 2 22 2 5 0000 77777777 6666666666 7 6 6666 4 7 99999 99999999 3 22 44 1 5 888 2 666666 00 6 6 4 9 5 2 333 9 1 22 1 3 77 999999999999999999999999 66 99 3 3 88888 9 77 777 222222222222222 000 99 33 11 55555555555555555 777 777777777777777777777777 77777777777 4 111111111 77 0 6 9 77 3 333333 44 44444444444444444444444444444444444444444 0 44 22222 77777777777 5 7 7 9 2 2 7 555
consensus : ATTGTAACAGTCTANGACCGTCTTC-CC-A-GA-TTCGTCCTTACA-T-T-T-A-C-AT-T-G-GA--AATA-AGA--A---------AGTAAC-AAAACATAAGTAGGGGAATATGAA--T---TTTNTTTNTTT-T--NTTTA-GTAGAATG-ATTA--AATG-NATTTCAATAA---------GTA-TATTT-------T-----------------G------TTACTATT--TT-GAAA--TTA-------GANA-GAGAGAGATTAGAAAGAGAGA----GATAGA----GACTTAGCTCGTTG---ACTAGTAAGG-TGNAAGTTACCTTTAGCGT--CTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAAC-ATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAATTT--ACCTGAGAAAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTA-----CTT--TT-T-AAGAAACACACTTTTATAAGT-A-TAATAAATAA-TATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGT-NATAAGAAC-TAT----A----A----T-----TAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAA------G------TAT---A--TATCT--ATAAATAG-TATT-----------------TAAGGTAATGAA---TAA------------------------CCTTAAGGT-----------AGTAAAA-----TG--TATCAAAG--TGTATGAATACTAGTA--AAACTGCA------TAATTA--TC-------A-------A------T-------A---------TTCAAT-TTAG--AT-----TTATAAAGATTGCAGAACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACANTATTTACTCTACA
Reference ( gi|3 ) : ATTGTAACAGTCTCAGACCGTCTTC-CC-A-GT-TTTGTCCTTACA-T-T-T-A-C-AT-T-G-GA--AATA---A--A---------AGTAAC-ACACGAAAAGTAGAGGAATATAAA-AT--ATTTCTTTCTTT-T--CTTTT-GTGGAATA-ATCA--AATG-TATTTCAATGA---------GTA-CATTT-------T-----------------G------TTACTATT--TC-GAAA--TCA-------GAAA-GAGAAAGATCAGAAAGAGAGA----GACAGA----GACTTAGCTCTGTG---GCAAGTAAGG-TGTAAGTTACCTTTAGCTT--CTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAAC-CAATACAAA------GCATTACAGAAAAAGCATGCAACATGAAATTT--ACTTGAGAAAGTATAGTT-AAGCCA-ATTCATTGTAGCTGTTTGACATCTATATTGTA-----ATT--TT-T-AAGAAACACACTATTACAAAT-A-TAATTAATAA-TATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATAT-CATAAGAAC-AAT----A----C----T-----TAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAA------G------GGT---A--TATCT--ATAAATAA-TATT-----------------TAAGGTAATGAA---TAA------------------------CCTTAAGGT-----------AGCAAAA-----TA--TATCAAAG--TGTATGAATACTGGAA--AACCTGCA------TAATTA--TT-------A-------A------T-------A---------TTCAAT-TTAG--AT-----TTATAAAGATTGCAGAACTCTATTTAT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACATTATTTGCTTTACAACCATACTGAAATAATTTCAA
gi|8 : ACTGTACTAGTCTAAGAC-GTCTTCACT-A-GA-TTTGTCTTTACATT-T-T-A-CAAG-T-G-CA--AATATAGA--G---------AATAAC-AAAACATAAGTCGGGGA---------------------TTT-TGGATTTA-GTAGAATG-ATTG--AATA-GATTTCAATAAAAAAAAATCATATTATTTTAGAAGGT-----------------G------TTACTATT--T----AG--T---------GAAA--ATTATGATTAAAAAAAGAGA----GATA-A----GATTTA-TTCTG
gi|12 : tATTGTAACAGTCTAAGGCCGTCTTCACT-A-GA-TTCGTTCTTACATT-T-T-A-CAAG-T-G-AA--AATAAAGA--A---------AGTAAC-AAAACATACGAAGGGGAATTTGGA---------CTTTTGTT-TAATTTTA-GTAGAATG-AATA--AATG--ATTTCAATAA---------GTA-TATTT-------TTTATTATCTTAGAAGACG------TTACTATTTATT-TAAA--ACATTGATTTGAAA-AAGAGAGATTAGAAATAGA-A----GGCAGATAGCGACTACGCTC-GCGTTCACTAGTAAGGACG-AAGTTACCTTTGGCGT--CCGC-CAA-CTAAGAACACGACATATATTTATTCTGGTTTATATACTCAA--CATTAC--G------GCAGCACAGAGGGGACATGCGAgcttatatacccaacacaaaaaagcatgcaacatgaaaattacatgagaaagtatagttaagtcatatttattgtagccgtttgacatctatgttgtattttttaagaaatacacctttataaataataataaatattatagacatatttatatcgaaacagaaagataacattgaaatctgtatgtaataagaactataattaattagttgtaacaatttctttatttgacctttgaatgtccaagaggtcaaacggacagtttatgctataaacacaacaaaaaaatatatctatatatagtaatcaaggtaacggataaccgtaaggaagttaaaaatatcaaagtgtatgaatactagtaaactgcatatttatcaatattcaatattgatttataacaattataatcatggttttataattaaatgaaaagtaattcctgctatttcttctttcctcataatactgcctttttcggtaaaaaatttca
gi|7 : TTGTAGCTGTCTTACGCCGTCTTC-CC-AAGA-TTCGTTCTTATAGT-T-T-G-C-GGGT-G-GA--GATA---A--AGAA------AGTAAC-AAAACATAAGAAGGGGAACATGAG-TT---TTTATTTCTTT-T--TATT----AGAATGTAT-A--AATA-CATTTCAATAA---------GTA-TATTT-------T-----------------G------ATATTATT--TTAGAAA--TTA-------aaaaatgttttatctcggtcccaaggcataat
gi|11 : TTGTAACAGTTTAAGACCGCCTTC-C--A----CTCGTCCTTACA-TAT-T-A-C-AT-TTG-AA--AATA---AGAA---------AGTACC-A------AAGCATATGTTTGTAAACGTGGATTT--TTATTT-T--CTTTTAGCAGAA-G-ATTT--AATG-GATTTCAATAA---------GTT-TATTT-------T-----------------G------GTAATATT--Tcggtgtaagttacctttagcgtctgtaaaaactaagtacagaatacacatttattctggtttatatagccaacatagacaaagtatcacagaaaaagcatgcagcatgaaatttacatgagaaagtatagtttaacttattcattgtagccgtctgacaattgtacttattttatgaaacacacttttataagtaataataaataatattataacataagcatatttattatgaaacaaaaagataacattgaaatatgtatgttagaagaactatgattaattaattattgtaatttctttatttgtccttaaaatgtctatgatgtcaagtagacagtttatgctagcacaacaataaaagtaactatcgataaatagtattttaggtaatgcataaccttaaggtagtacaatgtatcaaagcgtatgaatactagtaaaactgcataattatcaacagtgtatattcaatttagatttataaagattgcaaaactctatcgttttataattaactgaaagtcattcctactacaata
gi|5 : tTGTAACAGTCT-------TCT---CA-A-GA-TTCGTCCTTACA-T-T-T-TTC-AT-T-TTGA--AATA---A--ACTTAAAGGAAATAAC-AAAACAAAAGTAGGGGAACATGAA-TT---TTTATTTCTTT-T-----TA-GTAGAATT-ATTA--AATG-AATCAAAATAA---------GTA-TATTT-------T-----------------GAATATGTTAATATT--T---AAAGTTCC-------GATTTGAAAGAGATT-GACAGATAGA----GA--------GACTTCGCTCATTG---ACTAGTAAGG-TGGAAGTTACCTTCAGCGT--CTGTGAAA-CTAAGTGCAGAATACACATTTATTATGGCCTATATAGCCAAC-ATAGACAAA------GTAACACAGAAAAAGCATGCAATATGAAATTT--ACCTTAGAAAGTATAGTCAAAACTA-ATTCATTGTATCCGTTTTACATCTATATTGTA-----CTT--TT-T-AAGAA--ACACTTTTATAAGTAA-TAATAAATAG-TGTTTTACACTTAA--ACATGTTTATAATGAAACAG-AAAGGGAACATTGAAATCTGTAT-T-AATAAGAAC-TAT----A----A----T-----TAATTAGT--CATAGTAATTTCTTT-TTTTACTTTTAAATGTCTCAAGACGTCAAGTGAAC---------------AGCACAACAATAGAAATATACA------TGT---A--TATCA--ATAAATAG-TATT-----------------TAAGGTAATGAA---TAA------------------------CTTTAAGGA-----------AGTAAAA-----TG--TATCAAAT--TGTATGAATACTAGTA--AAACGGCA------TAATTA--ATAATAGCGA-------A------T-------A---------TTCAAT-TTAG--AT-----TTATAAAGATTGCAGAAC----TTTAT--TTTTATAATTAAATGAAA-AGT-CATTCCTGCT-ACAtagaagatgttgttatattaaagtatttcttgaaaagagcgtctgtgaaacaaaatactcatttattctggcttatgtagccaacatagacagattgcatgtatcacagaaaaagcaacataaaatttacctgagaatgtataatttaactaattcattgtagccgtctgacatctttattttacatttatgagttataataaataatatcacacacttaaatatagttataatgaaacttaaag
gi|28 : cTGTAACAGTCTATGACTGTCTTC-CC-A-ATATTCGTCCTTACA-T-TAT-A-C-Agt
gi|22 : gGTAACAGTCTATGAACGTCTTC-CTTA-GA-TTCGTCCTTAAAAT-T-T-A-C-AT-G-G-GGATAATAAAGA--A---------AGTGACTAAAC-ATAAGTACAGGAACATGA---------TTTTTATTTAT--TTTTA-GTCGAATG-ATTA--AATG-GATTTCGATAA---------GTA-TACTT-------T-----------------G------ATATTATT--Tgagggagagagagagtcta
gi|21 : GTAACAATCTACGACCGTTTTC-TTTA-GA-GTCGTCCCTACA-T-T-TTA-C-ATGT-G-GAG-AATA---AGAA---------AATTAC-AAAACATAAGTAGGGGAATATGAG-------TTTTTAATTT-C--CTTTTAGTAGAATG-ATTA--AATA-TATTTGGAT-A---------TTA---TCT-------TAGAAGAA----------G------TTACTATT--T--AAAA--TTA-------ttggagatgt
gi|4 : TAACAGTCTCTGACCGTTTCC-CC-A-GT-TTCGTCCTTACA-T-T-T-A-C-AT-T-G-GA--AATA---A--AGGA------AGTAAC-AAACAAAAAGTAGGGGAATATGAA-AT--ATATATTTCTTT-T-----TA-GGGGAATA-ATTA--AATG-TATTTCAATGA---------GTA-TAATT-------T-----------------G------TTACTATT--TT-GAAA--TTA-------GACA-GAGAAAGATCAGAAAGAGAGAAAGAGATAGA----GACTTAGTTTGGTG---ACGAGTAAGG-TGTAAGTGACCTTTAGCAT--CTGTGAAA-GTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAAC-CAAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAATTT--ACTTGAGAAAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGACATCTATATTGTA-----CTT--TT-T-AAGAAACACATTTTTATAAAT-AATAATAAATAA-TATTATACACTTAA--ACATGTTTATAACGAAACAA-AAAGAGAACATTGAAATCAAAATGT-TATAAGAAC-AGT----A----A----T-----TAATTGGT--TATAGTAATTGCTGTATTTGACCTACTTATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAA------G------TAT---A--TATCT--ATAAATAG-TATT-----------------TAAGGTAATGAA---TAA------------------------CCTTAAGGT-----------AGTAAAA-----TA--TATCAAAG--TGTATGAATATTCGAA--AAATTGTA------TAATTG--TT-------A-------A------T-------A---------ATGAAT----G----------TATAATGATTGCAGAACTC-A---AT--TTTTATAATTAGCT-AAA-AGT-TATTACTGCT-ACACTAT---CTCTACtga
gi|10 : ttTCC-CC-A-GA-TTCGTACTTACATT-T-T-A-C-ATGC-G-AA--AATATAGA--A---------AGTAAC-ACAC-ATATGTAGAGGAAT------AT--ACTTTTTTATTT-C--ATTTCAGTAGAACG-ATCATTGATATTGTTT----------------TA-GGTTG-------T-----------------G------TTACTATT--T--AAAA--TTA-------tatattacatctcattgtatttccaggcat
gi|15 : ta----GAGAGA----GGTTTAGCTCGTTG---ACTAGTAAGG-TGAAAGTTACATTTAACAG--TTGTGAAA-CTAAGTGCAGAATACAC----ATTCTGGCTTATATAGCCAAC-ATAGACAAA------GTATCACAGACAAA-TATGCAACATGAAAAT--------AAATAGTAT--TT-AAGGTA-ATcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|19 : AGA----GACTCGGGTCGTTG---ACTAGCAAGG-TGAAAGTTACTGTTAGCGT--CTGAGAAA-CTAAGTACAGAAAACACATTTATTCTGGCTTATATAGCCAAC-ATAGACAAG------GTATCACAGAAAAAGCAAACAACATGAAATTT--ACCAGAGAAAGTACAATT-AAACTA-ATTCATTgaataaccttaaagtagtaaaatgtgtaagattatattaatactagtaaaactacataacagtaattatcaatagtgaatgttcaatttagatttataaagattgcataactctaattttataattaattgaaaagtcattcctgctacaattctaccaaattaacggttctcagaca
gi|10 : ttagttatagagatcgaactatccaaccgagtaagGA----TACATAGCTCGTTG---ACTTGCAAGA-TGAAAGTTACGTTT--CTTGTTTGTGAAA------------------ATTTATTATGGCTTACATAGCCAAC-ATAGACGAA------GTATAACAGAAACATTATGCAACATGAAATTT--AAATCAGAAAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGATATATGTAGTGTAT----ATT--TTAA-AAAAAATACACTTTTATAAGTGA-CAATAAATAC-TAATATACACTTAA--ATATAGTTATATTGAAACCG-AAAGATAGCA--------TGTACATGTAAAAGAAC-TGT----A----A----T-----TAATTAGT--Tcaaagacgtatttag
gi|7 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcggAATTACGG-TGTAAGTTACCTTTAGCGT--CTGTAAAAACTAAGTACAGAATACACATTTATTCTGGTTTATATAGCCAAC-ATAGACAAA------GTATCACAGAAAAAGCATGCAGCATGAAATTT--ACATGAGAAAGTATAGTT-TAACTT-ATTCATTGTAGCCGTCTGACA-----ATTGTA-----CTTATTT-T-ATGAAACACACTTTTATAAGT-AATAATAAATAA-TATTATA-ACATAA--GCATATTTATTATGAAACAA-AAAGATAACATTGAAATATGTATGT-TAGAAGAAC-TAT----G----A----T-----TAATTAAT--TATTGTAATTTCTTTATTTGTCCTTAAAATGTC-TATGATGTCAAGTAGAC--AGTTTATGCT---AGCACAACAATAAAA--------------GT---AACTATCG--ATAAATAG-TATT-----------------TTAGGTAATGCA---TAA------------------------CCTTAAGGT-----------AGTACAA-----TG--TATCAAAG--CGTATGAATACTAGTA--AAACTGCA------TAATTA--TC-------AACAGTGTA------T-------A---------TTCAAT-TTAG--AT-----TTATAAAGATTGCAAAACTCTATC--G--TTTTATAATTAACTG-AA-AGT-CATTCCTACT-ACAATAtgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : ttgtagctgtcttacgccgtcttcccaagattcgttcttatagtttgcgggtggagataaagaaagtaacaaaacataagaaggggaacatgagtttttatttctttttattagaatgtataaatacatttcaataagtatattttgatattattttagaAGCGT--CTGTGAAA-C-------AAAATACTCATTTATTCTGGCTTATGTAGCCAAC-ATAGACAGATTGCATGTATCACAGAAAAAGCA----ACATAAAATTT--ACCTGAGAATGTATAATT-TAACTA-ATTCATTGTAGCCGTCTGACATCTTTATTTTAC----ATT--TA-T-GAG--------T--------T-A-TAATAAATAA-TATCACACACTTAA--ATATAGTTATAATGAAACTT-AAAG
gi|9 : tttgtaacagtttaagaccgccttccactcgtccttacatattacatttgaaaataagaaagtaccaaagcatatgtttgtaaacgtggatttttattttcttttagcagaagatttaatggatttcaataagtttattttggtaatattttagaagatgttgttatattaaagtatttcttgaaaag--CTGTGAAA-CTCAGTACAGTATACACATTTATTCTGGCTTATATAATCAAC-C----CAA----------TCATAGACAAATTTTGCAACATGAAATTT--ACTTGAGAAAGTATAGTT-AAACTA-ATTCATTGAAGCTGTGTGACATCTATATTGTA-----CTT--TA-T--ACAAACACACTTTTATAAGTAA-TAATAAATAA-TATTACACACTTAA--ACATATTTATAATGGAACAG-AAAGAGAACATTGAAATCTGTATGT-TATAAGAAC-TAT----A----A----T-----TAATTAGT--------------TTTATTTGACCTTTAAATGTC-CAAGATGTCAAGAAGAC--AGTTTATGGT---AGC---ACAATAGAA------GTATATATAT---A--TATAT--ATAAACAG-TATT-----------------TAAGGTAATGAA---TAGGTACTACTAAAACCCGGCCAGGTTCCTTAGGTT-----------AGTAAAA-----AG--TATCTATGTTTATATCAATACTGGTA--AAACTGCC------TAATTA--TC-------A-------A------TAGTGAAAA---------TTAGAT-TTAG--AT-----TTATAAAGATTGGAGAACTC----TGT--CTTTATAATTAACTGAAA-AGT-AATTCCTGCT-ACAATATATA--TTACA
gi|8 : ttttctaacaaaacatataatgtaatttcaagattgaaaattttggggtgttgactttattttttacaagttttaaacttatattgcgcATTTATTCTGGCTTATATACCCAAC---------------------ACA-AAAAAGCATGCAACATGAAAATT--ACATGAGAAAGTATAGTT-AAGTCATATTTATTGTAGCCGTTTGACATCTATGTTGTA-----TTT--TT-T-AAGAAATACACCTTTATAAAT-A---AT-AATAAATATTATA------G--ACATATTTATATCGAAACAG-AAAGATAACATTGAAATCTGTATGT-AATAAGAAC-TAT----A----A----T-----TAATTAGT--TGTAACAATTTCTTTATTTGACCTTTGAATGTC-CAAGAGGTCAAACGGAC--AGTTTATGCTATAAACACAACAAAAAAA---------------T---A--TATCT--ATATATAG-TAAT-----------------CAAGGTAACGGA---TAA------------------------CCGTAAGGA-----------AGTTAAA-----AA--TATCAAAG--TGTATGAATACTAGTA--AA-CTGCA------TATTTA--TC-------A-------A------T-------A---------TTCAAT-ATTG--AT-----TTATAACAATTA--------TAATCATGGTTTTATAATTAAATGAAA-AGT-AATTCCTGCT-Atcaaattcaatt
gi|2 : tactgtactagtctaagacgtcttcactagatttgtctttacattttacaagtgcaaatatagagaataacaaaacataagtcggggattttggatttagtagaatgattgaatagatttcaataaaaaaaaatcatattattttagaaggtgttactatttagtgaaaattatgattaaaaaaagagagataagTATATAGCCAAC-ATAGACAAA------GTATCACAGAAAAAGCATGCAACATAAAATTT--ACCAGCGAAAGTATAGTT-AAACTA-ATTCATTGTAGCCATTTAATATCTATATTGTA-----CTT--TT-T-AAGAAGCACAGTTTTATAAGTAA-TAATAAATAA-TATTATACACCTAGATACATATGTATAATGGAATAG-AAAGAGAACATTGAAATCAGTATGT-AATAAGAAC-TCT----A----A----G-----GAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGCGGAC--AGTTTATGCT---AGCACAACAATAAAA------G------TAT---A--TATGTCAATAAAAAAGTATT-----------------TGAGGTAAAGAA---TAA------------------------TCTTAAGGT-----------AGTAAAA-----TG--CATCAAAG--TGTAT-AATACTAGTA--AAACTGCATAT---TAATTA--TC-------A-------G------T-------ATTCAGTATCTTCAAT-TTAG--AT-----TTATAAAGATTGCAGAACTC----TGT--TTTTAT-ATTTACCGAAA-AAT-CATTCCTGCT-ACACT-TTTtttcttctttcctcataatactgcctttttcggtaaaaaatttca
gi|6 : TATATAGCCAACATAA-ATAAA------GTATTATAGAAAAAGCATGCAACATATAATTT--ACCTGTGAAAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATAATGTA-----CTT--TT-T-AAGAAACACACTTTTATAAGT-ATTAATAAATAA-TATTATACACCTAT--ACATATGTATAATGGAACAA-AAAGAGAACATTGAAATCAGTATGT-AATAGGAAC-TAT----A----A----G-----GAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTTTGCT---AGCACAACAATAGAA------G------TATATAA--TATCA--ATAAAAAG-TATT-----------------TGAGGTAAAGAA---TAA------------------------TCTTAAGGT-----------AGTAAAA-----TG--CATCAAAG--TGTAT-AATAC--AAATTAAACTGCATAT---TAATTA--TC-------A-------A------T-------ATTCAATATCTTCAAT-TTAG--AT-----TTATAAAGATTGCAGAACAC----TGT--TTTTAT-ATTTACAGTAA-AAT-CATTCCTGCT-ACACTATTctattctattctatacgtaattcatttaataactatttgtaacatcccatgactcgttatattaaatcgtaaattgtgtaataaaagttttaatgaaactgaaagaggacctctttttatctttttaggaacagtccattaataccgttccaccagaacaaaacgttggtgcagaatcaatggataccagccactggtgagttatctctcagagatggaggttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggcgtcatagtagggtcgccctaaaaaaacttgttttccat
gi|1 : TATATAGCCAAC-ATAGACAAA------ATATCACAGAAAAAGCATGCAACATAAGATTT--ACCTGTGAAAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATATTGTA-----CTT--TT-T-AAGAAGCACAGTTTTATAAGTAA-TAATAAATAA-TATTATACAACTAT--ACATATGTATAATGGAACAGAAAAAAGAACATTGAAATCAGTATGT-AGTAAGAAC-TATAAGGA----T----T-----TAGTTA----TATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAAAA------G------TAT---A--TATATCAATAAAAAG-TTTT-----------------TGAGGTAAAGAA---TAA------------------------TCTTAAGGT-----------AGTATAA-----TG--CATCAAAG--TGAAT-AATACTAGTA--AAACTGCATAT---TAATTA--TC-------G-------A------T-------ATTCAATATCTTCAAT-TTAG--AT-----TTATAAAGATTGCAGAACTC----TGT--TTTTA-AATTTACAGAAA-AAT-CATTCCTGCT-ACACT-TTTctattctattctattctatacgttattcatttaataactatttataacatcccgtgactcgttatattaaatcgtaaattgtgtaataaaagttttattgaaactggaaatggacctctttttatctttttaggatcagtccattaataccgtgccaccagagcaaaacattggtgcagaaacaatggatcccagccactggtgagttatctctcaggggagacaagatggaagccga
gi|23 : ACAAA------TTATTACAGAAACAGCATACAACATGAAATTTGAAAT--ACAAAATATAGTT-AAACTA-ATCCAGTGTAGCCGTTTGACATCTATATTGCA-----ctattctattctatatgtaattcttttaataacaatttataacatcccgtgactcattatattaaatcgtaaattgtgtaataaaagttttattgaaactggaagaggacctctttttatctttttaggaacagtttattaataccgtgccaccagaacaaaacgttggtgcagaatcaatggatcccagccactggtgagttatctctcagagtagacaagatggaggtcgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggtgtcatagtagggtcgccctaaaagaaacttgttttccat
gi|24 : ataaCATTATAGCCGTTTG-----TATATTGTACTTTTATT--TT-TTAAGTAATACACTTTTATAAGT-AATAATAAATAA-TATAATACACTAAA--ACACATTTATATTGAAACGG-GAAAAgatgatatcataaagtgttttactcagtagataaactataacaagggtcccacttattat
gi|30 : ACTTCTAGAAGT-AATACTAAATAA-TATTATACACCCAA--ACATA-TTATAATGAAACAG-AAt
gi|13 : A-TACGATACACTTAA--ACATATCTATAATGAAGCAG-A----TAACATTAAAATATGTATAT---TAA-----AAT----A----A----C-----TAATTACT--T-TAGTAATTTCTTTATTTGACCTTTAAATGTC-CAAGATGTTAAGTGGAC--AGTCTATGCT---AGCATAACAATAGAA------G------TAT---A--TATCT--ATACATAG-TATT-----------------TTAGGAAAT--------------------------------------------------------AAAA-----TG--TATCAAAG--TGTATGAATACTAGTG--AAACTGCA------TAAATA--TG-------A-------A------T-------A---------GTAAATATTAT--ATAATGGTT-TAAAGATTGCAGAACTCTA--TGG--TTTTATAATTAACTGAAA-AGT-AATTACAGCT-ACAATATT
gi|14 : CATTGAAATCTGTATGT-AACAAGAACTAGT----AAGAAC----TAGAATTAATTA-T--TATAGTAATTTATTTATTTTATGTTTAAATGTC-CAAGCTGTCAAGTGGATGTAGTTTATGCT---AGTACAACAATAGAA------G------TAT---A--TATAA--ATAAATAG-TATTTAGGTCATGGATAACCATAAGGTAGTTAAATGTA---------------------------TCAAAGTGTATGAATACTAGTAAAACTGCATAAGTATCAAAG--TGTATGAATACTAGTA--AAACTGCA------TAAGTA--TC-------A-------AAGTGTAT-------A---------TTCAAT-TCAA--AT-----TTATAAAGATCGCAGAAC----TTTAT--TTTTATAATTAACTG-AA-ACT-CATTCCTGTT-ACActgaccatatacaattacgttccagcaggaaaaataacatttatgttactcattgtat
gi|16 : gcgTGTATGT-TATAAGAAC-AAT----T----A----T-----TAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAA------G------TTT---G--CATCT--A-------------------------------AGGTAATGAA---TAA------------------------CCTTAAGGT-----------AATAAAA-----TA--TATCAAAG--TGTATGAACACTGGGA--AAATTGCA------TAATTG--TTTATAATGA-------A------T-------A---------TTCAAT-TTAT--AT-----TTATAAAGATTGCAGAACTC----TAT--TGTTATAATTAACTAAAAGAGT-CATTCCTGCT-ACAATATTa
gi|17 : gtaAAGAAC-G-T----A----CGTAGT-----CAATTGGT--TATAGTTATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---TGCACAACAACAGAA------G------GGT---A--TGTCT--ATAAATAG-TATT-----------------TAAGGTAATGAA---TAA------------------------TCTTAAGGT-----------AGCAAAA-----TA--TATTAAAG--TGTATGAATACTGGAA--AACCTGCA------TAATTA--TC-------A-------A------T-------AG--------TTCAAT-TTAG--AT-----TTATAAAGATTGCAGAAC-----------TTTTATAATAAAC-AAAA-AATACATTCTTGCT-ACAatcattatgtatctcagaattcacagctttact
gi|25 : catatacttagctgggttcttgaAGAAC-GAT----A----A----T-----CAATTAGT--TATAGTAATTTCTTTATTTGGCTT-TTAATGTC-CAAGATGTCGAATGGAC--ACTTTATGCT---AGCACAACAATAGA
gi|18 : tctgaattaaaacTGTT-CAAGATGTGAAATGGAC--AGCTTATGCT---AGCAGAACACCATAAGTACGTG------GAT---A--TTTCT--ATAAATAG-TATT-----------------TAACGTAATGAA---TGG------------------------CTTTAAG-------------------------TG--TATCTAAG--TGTATGAATACTAGTA--AAACTGAA-------AA--A--CA-------G-------G------T-------T---------TTTAGT-TTGGTTAT-----TCATATATATTGC
gi|31 : TGGAC--AATTTACGCT---AGCACAACAATATAT------G------TAT---A--TACTT--ATAAATAG-TA--------------------AAAGTAcatcaagttatttacagcaatggcataacacatcataagtggataaatgaaaagaaatatccgcagttttt
gi|15 : --ATAAATAG-TATT-----------------TAAGGTAATGAA---TAA------------------------CCTTAAAGT-----------AGTAAAA-----TG--TGTAAGAT--TATATTAATACTAGTA--AAACTACATAACAGTAATTA--TC-------A-------A------T-------AGTGAATG--TTCAAT-TTAG--AT-----TTATAAAGATTGCATAACTCTA---A---TTTTATAATTAATTGAAA-AGT-CATTCCTGCT-ACA
gi|20 : gagagaggtttagctcgttgactagtaaggtgaaagttacatttaacagttgtgaaactaagtgcagaatacacattctggcttatatagccaacatagacaaagtatcacagacaaatatgcaacatgaaaTAG-TATT-----------------TAAGGTAATGAG---TAA------------------------CCTTAAGAT-----------AG-AAAA-----T----------G--TGTA-----------A--AAC-TGCA------TAATTA--TC-------A-------A------T-------AGTGAATA--TTTAAT-GTAG--AT-----TTATAAAGATTATAG--------TTAAGATTTTATCATTAATTGAAA-AGT-AATTCCTGCTAACATattctaccaaattaacggttctcagaca
gi|26 : CTGCA------TAATTAATTT-------A---------------------------------TCAATAGTGA--AT-----TTATAAAGATTACAG--------TTGTGGTTTTATAATTAACTG--A-AGT-TATacatgtactgaagcattttttttttacaatggcataatgtagttattttatt
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|27 ): ACTGGAACTGGAAAAGGACCGCTTCTTATCTTTTTGGATCAGCCCATTTATATCACTGGAACTGGAAAA
Unaligned ( gi|29 ): TTATTTTCCCATTTTTTATTTTTTAAAAATAACAAAAAAAATGTTAACAAAGAAATACTGTTTAACCT
Unaligned ( gi|32 ): CAACCACAGGTGTCATAGTAGGGTCGCCCTAAAAAAAACTTGTTTTCCA
Alignments
lowQualScore : 1 1 22222 22222222222 33333333333333 111111111 5555555555555555555555555 1111 1111 111111 1111 22222222 222 11111111111 11 11111 11111111111111111111 222222222222222222222222 111111 11111111111111111111111111111111 33333333333333333 11
lowQualScore : 777 7 99 3 3 0 3 3 4 22222 3 55 11111111111 2 4 4 4 11111111111111 8 55 88 666666666 77 6666666666666666666666666 2222 55 1111 111111 5 3333 1 0 99999999 1 77 1 9999 55 4 1 2 777777 444 1 6666 2 2 44 999999 44 3 111 33 2 1 33333333333 2 33 11 1 00000 2 33 444 33333333333333333333 444 0 66 2 222222222222222222222222 33 4 999999 22222222222222222222222222222222 99999999999999999 2 4 33 55555 33 5555 66 1 2 2 2 33 3 22 0
lowQualScore : ... . .. . . . . . . ..... . .. ........... . . . . .............. . .. .. ......... .. ......................... .... .. .... ...... . .... . . ........ . .. . .... .. . . . ...... ... . .... . . .. ...... .. . ... .. . . ........... . .. .. . ..... . .. ... .................... ... . .. . ........................ .. . ...... ................................ ................. . . .. ..... .. .... .. . . . . .. . .. .
lowQualScore : 111 3 99 6 6 9 6 6 5 11111 6 00 55555555555 2 0 0 0 88888888888888 0 55 99 000000000 44 5555555555555555555555555 7777 55 5555 555555 0 6666 4 8 00000000 5 99 0 4444 55 0 4 1 777777 777 5 1111 9 9 66 666666 66 1 888 99 9 0 88888888888 7 77 00 5 00000 7 44 444 00000000000000000000 444 4 55 4 666666666666666666666666 44 1 111111 99999999999999999999999999999999 99999999999999999 4 7 22 99999 44 3333 99 2 4 4 5 77 5 33 8
consensus : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAACAT-GAA-T-TTT--N-TTTATTT-T-TTT-AGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAG-TAA-TAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA------TAATT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
Reference ( family-624 ) : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAATAT-GAA-T-TTT--N-TTTNTTT-TNTTT-AGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAG-T-A-TAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA------TAATT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
gi|1 : TATATAGCCAACATAGACAAA------ATATCACAGAAAAAGCATGCAACATAAGA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAG-TAA-TAATAAATAATATTATACAACTAT--ACATATGTATAATGGAACAGAAAAAAGAACATTGAAATCAGTATGTAG----------TAAGAAC-TA--TAAGGATTTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATATCAAT-AAAAAGTTTTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTATAATGCATCAAAG--TGAAT-AATACTAGTAAAACTGCATAT---TAATT-------A-------TC-------G-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTA-AATTTACAGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTA
gi|10 : TCC-CC-A-G-ATTCGTACTTACA-T-T-TTACA-TGC-GAA-A--AT-------ATA-GAAAGTAACACA-CATATGTAGAGGAATAT---A-C-TTT----TTTATTT-CATTTCAGTAGAACGATCATTGATATTGTTT---TAG---------GT-----TG-------T-----------------GTTACTA----TT--T--A-AA------ATT-Attctatatgtaattcttttaataacaatttataacatcccgtgactcattatattaaatcgtaaattgtgtaataaaagttttattgaaactggaagaggacctctttttatctttttaggaacagtttattaataccgtgccaccagaacaaaacgttggtgcagaatcaatggatcccagccactggtgagttatctctcagagtagacaagatggaggtcgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggtgtcatagtagggtcgccctaaaagaaacttgttttccat
gi|10 : taGATACATAGCT--CGTTGACTTGCAAGATGAAAGTT----ACGTTTC--TTGTTTGTGAAA------------------ATTTATTATGGCTTACATAGCCAACATAGACGAA------GTATAACAGAAACATTATGCAACATGAAA---TTTAAATCAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGATATATGTAGTGTATAT--TT------TAAAAAAAATACACTTTTATAAG-TGA-CAATAAATACTAATATACACTTAA--ATATAGTTATATTGAAACCG-AAAGATAGCA-TG-----TACATGTAA-----------AAGAAC-TG--TAATTAATTAGT--Tcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgg------T------A------T---ATATAT--AT-AAACAATATTTAAAGAAATCAATTA------------------------CCTTCA-GT--TAAAATtgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttaTTAAAATAAACTGATA-AAT-CATTCTTGCT-ACA-CT-TT-T-CTCaaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagTTGTAACAGTTT-AAGACCGCCTTC-C------ACTCGTCCTTACA-TAT-T-ACA-T-TTGAA-A--AT-------A-A-GAAAGTACCAAAGCATATGTTTGTAAACGT-GGA-T-TTT------TATTT-TCTTTTAGCAGAA-GATTT--AATGG-ATTTCAATAA---------GTT-TATTT-------T-----------------GGTAATAT---TT--T--A-GA------Aatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tA--GCGTCTGTGAAA-C-------AAAATACTCATTTATTCTGGCTTATGTAGCCAACATAGACAGATTGCATGTATCACAGAAAAAGCA----ACATAAAA---TTTACCTGAGA----ATGTATAATT-TAACTA-ATTCATTGTAGCCGTCTGACATCTTTATT----TT------------------ACA----TTTATGAGTT-A-TAATAAATAATATCACACACTTAA--ATATAGTTATAATGAAACTT-AAAGgatgttgttatattaaagtatttcttgaaaagagcgtctgtgaaacaaaatactcatttattctggcttatgtagccaacatagacagattgcatgtatcacagaaaaagcaacataaaatttacctgagaatgtataatttaactaattcattgtagccgtctgacatctttattttacatttatgagttataataaataatatcacacacttaaatatagttataatgaaacttaaag
gi|12 : tttgtaacagtttaagaccgccttccactcgtccttacatattacatttgaaaataagaaagtaccaaagcatatgtttgtaaacgtggatttttattttcttttagcagaagatttaatggatttcaataagtttattttggtaatattttagaagatgttgttatattaaagtatttcttgaaaagATTGTAACAGTCT-AAGGCCGTCTTCACT-A-G-ATTCGTTCTTACA-T-T-TTACAAG-T-GAA-A--AT-------A-AAGAAAGTAACAAAACATACGAAGGGGAATTT-GGACT-TTT--G-TTTAAT----TTT-AGTAGAATGAATA--AATG--ATTTCAATAA---------GTA-TATTT-------TTTATTATCTTAGAAGACGTTACTATTTATT--T--A-AAACATTGATT-TGA-AAAAGAGAGATTAGAAATAGAAGGCA----GATAGCGACTACGCTCGCGTTCACTAGTAAGGACGAAGTT----ACCTTTG--GCGTCCGC-CAA-CTAAGAACACGACATATATTTATTCTGGTTTATATACTCAACAT---TACG------GCAGCACAGAGGGGACATGCGAAA--AAATGTTTTATCT
gi|13 : ATACGATACACTTAA--ACATATCTATAATGAAGCAG-A----TAACATTAAAATATGTATATTA--------------AA---A--TAACTAATTACT--T-TAGTAATTTCTTTATTTGACCTTTAAATGTC-CAAGATGTTAAGTGGAC--AGTCTATGCT---AGCATAACAATAGAAG------T------A------T---ATATCT--AT-ACATAGTATTTTAGGAAA------------------------------------------TAAAATGTATCAAAG--TGTATGAATACTAGTGAAACTGCA------TAAAT-------A-------TG-------A-------AT-------A---------G-TAAATATTAT--ATAATGGTT-TAAAGATTGCAG--AACTC----TATGGTTTTATAATTAACTGAAA-AGT-AATTACAGCT-ACA-ATATT-cggtcccaaggcataat
gi|14 : CATTGAAATCTGTATGTAACAAGAACTAGTAAGAAC-TA--GAATTAATTA-T--TATAGTAATTTATTTATTTTATGTTTAAATGTC-CAAGCTGTCAAGTGGATGTAGTTTATGCT---AGTACAACAATAGAAG------T------A------T---ATATAA--AT-AAATAGTATTTA-GGTCATGGATAA------------------------CCATAAGGTAGTTAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA------TAAGT-------A-------TC-------A-------Actgaccatatacaattacgttccagcaggaaaaataacatttatgttactcattgtat
gi|14 : gcg-------AT-------A---------T-TCAAT-TCAA--AT-----TTATAAAGATCGCAG--AACTT----TAT--TTTTATAATTAACTG-AA-ACT-CATTCCTGTT-ACA-agtgtatgaatactagtaaaactgcataagtatcaaagtgtatattcaattcaaatttataaagatcgcagaactttatttttataattaactgaaactcattcctgttacaa
gi|15 : gcgcattgaaatctgtatgtaacaagaactagtaagaactagaattaattattatagtaatttatttattttatgtttaaatgtccaagctgtcaagtggatgtagtttatgctagtacaacaatagaagtatatataaataaatagtatttaggtcatggataaccataaggtagttaaatgtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgt----GAGAGAGGTTTAGCT--CGTTGACTAGTAAGGTGAAAGTT----ACATTTA--ACAGTTGTGAAA-CTAAGTGCAGAATACAC----ATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGACAAA-TATGCAACATGAAA---AT------AAA----TAGTAT--TT-AAGGTA-ATa
gi|15 : --AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAAGTAGTAAAATGTGTAAGAT--TATATTAATACTAGTAAAACTACATAACAGTAATT-------A-------TC-------A-------AT-------AGTGAATG--T-TCAAT-TTAG--AT-----TTATAAAGATTGCAT--AACTC----TAA--TTTTATAATTAATTGAAA-AGT-CATTCCTGCT-ACA-AT-TC-TACgaataaccttaaagtagtaaaatgtgtaagattatattaatactagtaaaactacataacagtaattatcaatagtgaatgttcaatttagatttataaagattgcataactctaattttataattaattgaaaagtcattcctgctacaattctaccaaattaacggttctcagaca
gi|16 : gagagaggtttagctcgttgactagtaaggtgaaagttacatttaacagttgtgaaactaagtgcagaatacacattctggcttatatagccaacatagacaaagtatcacagacaaatatgcaacatgaaaTGTATGTTA----------TAAGAAC-AA--TTATTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T-------------------------------TTGCATCTAAGGTAATGAATAA------------------------CCTTAAGGTAATAAAATATATCAAAG--TGTATGAACACTGGGAAAATTGCA------TAATTGTTTATAA-------TG-------A-------AT-------A---------T-TCAAT-TTAT--AT-----TTATAAAGATTGCAG--AACTC----TAT--TGTTATAATTAACTAAAAGAGT-CATTCCTGCT-ACA-ATATT-caaattaacggttctcagaca
gi|17 : gtaAAGAACGTACGTAGTCAATTGGT--TATAGTTATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---TGCACAACAACAGAAG------G------G------T---ATGTCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------TCTTAAGGTAGCAAAATATATTAAAG--TGTATGAATACTGGAAAACCTGCA------TAATT-------A-------TC-------A-------AT-------AG--------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AAC-----------TTTTATAATAAAC-AAAA-AATACATTCTTGCT-ACA-atcattatgtatctcagaattcacagctttact
gi|18 : catatacttagctgggttcttgaTGTT-CAAGATGTGAAATGGAC--AGCTTATGCT---AGCAGAACACCATAAG------TACGTGGA------T---ATTTCT--AT-AAATAGTATTTAACGTAATGAATGG------------------------CTTTAAG---------TGTATCTAAG--TGTATGAATACTAGTAAAACTGAA------AAA------------------C-------AG------GT-------T---------T-TTAGT-TTGGTTAT-----TCATATATATTGC
gi|19 : AGAGACTCGGGT--CGTTGACTAGCAAGGTGAAAGTT----ACTGTTA--GCGTCTGAGAAA-CTAAGTACAGAAAACACATTTATTCTGGCTTATATAGCCAACATAGACAAG------GTATCACAGAAAAAGCAAACAACATGAAA---TTTACCAGAGA----AAGTACAATT-AAACTA-ATTCATTcatcaagttatttacagcaatggcataacacatcataagtggataaatgaaaagaaatatccgcagttttt
gi|2 : ttagttatagagatcgaactatccaaccgagtaagTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATAAAA---TTTACCAGCGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCATTTAATATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAG-TAA-TAATAAATAATATTATACACCTAGATACATATGTATAATGGAATAG-AAAGAGAACATTGAAATCAGTATGTAA----------TAAGAAC-TC--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGCGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATGTCAATAAAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACTAGTAAAACTGCATAT---TAATT-------A-------TC-------A-------GT-------ATTCAGTATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTAT-ATTTACCGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTAcaaagacgtatttag
gi|20 : TAGTATTTAAGGTAATGAGTAA------------------------CCTTAAGATAG-AAAATGT----------------------GTAAAACTGCA------TAATT-------A-------TCAATAGTGA-------AT-------A---------T-TTAAT-GTAG--AT-----TTATAAAGATTATAGTTAA--------GA--TTTTATCATTAATTGAAA-AGT-AATTCCTGCTAACATACATG-TACTttctatacgtaattcatttaataactatttgtaacatcccatgactcgttatattaaatcgtaaattgtgtaataaaagttttaatgaaactgaaagaggacctctttttatctttttaggaacagtccattaataccgttccaccagaacaaaacgttggtgcagaatcaatggataccagccactggtgagttatctctcagagatggaggttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggcgtcatagtagggtcgccctaaaaaaacttgttttccat
gi|21 : GTAACAATCT-ACGACCGTTTTC-TTTA-G-AGTCGTCCCTACA-T-T-TTACA-TGT-GGAGA--AT-------A-A-GAAAATTACAAAACATAAGTAGGGGAATAT-GAG-T-TTTTAA-TTTCCT----TTT-AGTAGAATGATTA--AATAT-ATTTGGATA-----------T--TATCT-------TAGAAGAA----------GTTACTA----TT--T--A-AA------ATT-Agaagcattttttttttacaatggcataatgtagttattttatt
gi|22 : GTAACAGTCT-ATGAACGTCTTC-CTTA-G-ATTCGTCCTTAAAAT-T-T-ACA-T-G-GGG-ATAAT-------A-AAGAAAGTGACTAAACATAAGTACAGGAACAT-GAT-T-TTT--A-TTTATT----TTT-AGTCGAATGATTA--AATGG-ATTTCGATAA---------GTA-TACTT-------T-----------------GATATTAT---TT--TTGG-AG------ATtga
gi|23 : ATAAACAAA------TTATTACAGAAACAGCATACAACATGAAA---TTT----GAAATACAAAATATAGTT-AAACTA-ATCCAGTGTAGCCGTTTGACATCTATATTGCAgt
gi|24 : CATTATAGCCGTTTG-----TATATTGTACTT--TTATTTTTT--AAGTAATACACTTTTATAAG-T-AATAATAAATAATATAATACACTAAA--ACACATTTATATTGAAACGG-GAAAAgatgatatcataaagtgttttactcagtagataaactataacaagggtcccacttattat
gi|25 : AGAAC-GA--TAATCAATTAGT--TATAGTAATTTCTTTATTTGGC-TTTTAATGTC-CAAGATGTCGAATGGAC--ACTTTATGCT---AGCACAACAATAGAt
gi|26 : tctgaattaaaacAACTGCA------TAATT-------A------------------------AT-------T---------TATCAATAGTGA--AT-----TTATAAAGATTACAG----TTG----TGG--TTTTATAATTAACTG--A-AGT-TAT
gi|28 : TGTAACAGTCT-ATGACTGTCTTC-CC-A-ATATTCGTCCTTACA-T-TAT-ACA-G-A-GGG-A--GA-------G-A-GAGAGT
gi|3 : gATTGTAACAGTCT-CAGACCGTCTTC-CC-A-G-TTTTGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A----AAAGTAACACACGAAAAGTAGAGGAATATAAAA-TATTT--C-TTTCTTT-TCTTT-TGTGGAATAATCA--AATGT-ATTTCAATGA---------GTA-CATTT-------T-----------------GTTACTAT---TT--C--G-AA------ATC-AGA-AAGAGAAAGATCAGAAAGAGAG---A----GACAGAGACTTAGCT--CTGTGGCAAGTAAGGTGTAAGTT----ACCTTTA--GCTTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAATACAAA------GCATTACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAGCCA-ATTCATTGTAGCTGTTTGACATCTATATTGTAATT--TT------T--AAGAAACACACTATTACAAA-T-A-TAATTAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATATCA----------TAAGAAC-AA--TACTTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------G------G------T---ATATCT--AT-AAATAATATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGCAAAATATATCAAAG--TGTATGAATACTGGAAAACCTGCA------TAATT-------A-------TT-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTCTATTTAT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-TTATT-TGCTTTACActa
gi|30 : ACTTCTAGAAG-T-AATACTAAATAATATTATACACCCAA--ACATA-TTATAATGAAACAG-AAaccatactgaaataatttcaa
gi|31 : TGGAC--AATTTACGCT---AGCACAACAATATATG------T------A------T---ATACTT--AT-AAATAGTA---AAAGTA
gi|4 : TAACAGTCT-CTGACCGTTTCC-CC-A-G-TTTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-AAGGAAGTAACAAACAAAAAGTAGGGGAATAT-GAA-A-TAT--A-TATTTCT-T-TTT-AGGGGAATAATTA--AATGT-ATTTCAATGA---------GTA-TAATT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-CAGAGAAAGATCAGAAAGAGAG---AAAGAGATAGAGACTTAGTT--TGGTGACGAGTAAGGTGTAAGTG----ACCTTTA--GCATCTGTGAAA-GTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACATTTTTATAAA-T-AATAATAAATAATATTATACACTTAA--ACATGTTTATAACGAAACAA-AAAGAGAACATTGAAATCAAAATGTTA----------TAAGAAC-AG--TAATTAATTGGT--TATAGTAATTGCTGTATTTGACCTACTTATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATATATCAAAG--TGTATGAATATTCGAAAAATTGTA------TAATT-------G-------TT-------A-------AT-------A---------A-TGAAT----G----------TATAATGATTGCAG--AACTC----AAT--TTTTATAATTAGCT-AAA-AGT-TATTACTGCT-ACA-CTAT----CTCTAC
gi|5 : ttTGTAACAGTCT--------TCT---CA-A-G-ATTCGTCCTTACATT-T-T-TCATT-T-TGA-A--ATAAACTTAA-A-GGAAATAACAAAACAAAAGTAGGGGAACAT-GAA-T-T------TTTATTTCTTTTT-AGTAGAATTATTA--AATGA-ATCAAAATAA---------GTA-TATTTTGAATA-T-----------------GTTAATA----TT--T--A-AA------GTTCCGATTTGAAAGAGATT-GACAGATAG-----------AGAGACTTCGCT--CATTGACTAGTAAGGTGGAAGTT----ACCTTCA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTATGGCCTATATAGCCAACATAGACAAA------GTAACACAGAAAAAGCATGCAATATGAAA---TTTACCTTAGA----AAGTATAGTCAAAACTA-ATTCATTGTATCCGTTTTACATCTATATTGTACTT--TT------T--AAGAA--ACACTTTTATAAG-TAA-TAATAAATAGTGTTTTACACTTAA--ACATGTTTATAATGAAACAG-AAAGGGAACATTGAAATCTGTAT-TAA----------TAAGAAC-TA--TAATTAATTAGT--CATAGTAATTTCTTT-TTTTACTTTTAAATGTCTCAAGACGTCAAGTGAAC---------------AGCACAACAATAGAAA------T------ATACATGT---ATATCA--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CTTTAAGGAAGTAAAATGTATCAAAT--TGTATGAATACTAGTAAAACGGCA------TAATT-------AATAATAGCG-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTT----TAT--TTTTATAATTAAATGAAA-AGT-CATTCCTGCT-ACA-GTtatattacatctcattgtatttccaggcat
gi|6 : cTATATAGCCAACATAAATAAA------GTATTATAGAAAAAGCATGCAACATATAA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATAATGTACTT--TT------T--AAGAAACACACTTTTATAAG-T-ATTAATAAATAATATTATACACCTAT--ACATATGTATAATGGAACAA-AAAGAGAACATTGAAATCAGTATGTAA----------TAGGAAC-TA--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTTTGCT---AGCACAACAATAGAAG------T------A------TATAATATCA--AT-AAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACAAATTAAACTGCATAT---TAATT-------A-------TC-------A-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACAC----TGT--TTTTAT-ATTTACAGTAA-AAT-CATTCCTGCT-ACA-CTATTCTATTCTA
gi|7 : TTGTAGCTGTCTTACG-CCGTCTTC-CC-AAG-ATTCGTTCTTATAGT-T-T-GCG-GGT-GGA-G--AT-------A-AAGAAAGTAACAAAACATAAGAAGGGGAACAT-GAG-T-TTT--TATTTCTTT-T---T-ATTAGAATGTATA--AATAC-ATTTCAATAA---------GTA-TATTT-------T-----------------GATATTAT---TT--TA-G-AA------ATT-Attctattctatacgttattcatttaataactatttataacatcccgtgactcgttatattaaatcgtaaattgtgtaataaaagttttattgaaactggaaatggacctctttttatctttttaggatcagtccattaataccgtgccaccagagcaaaacattggtgcagaaacaatggatcccagccactggtgagttatctctcaggggagacaagatggaagccga
gi|7 : TACGGTGTAAGTT----ACCTTTA--GCGTCTGTAAAAACTAAGTACAGAATACACATTTATTCTGGTTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAGCATGAAA---TTTACATGAGA----AAGTATAGTT-TAACTT-ATTCATTGTAGCCGTCTGACA-----ATTGTACTTATTT------T--ATGAAACACACTTTTATAAG-TAA-TAATAAATAATATTATA-ACATAA--GCATATTTATTATGAAACAA-AAAGATAACATTGAAATATGTATGTTA----------GAAGAAC-TA--TGATTAATTAAT--TATTGTAATTTCTTTATTTGTCCTTAAAATGTC-TATGATGTCAAGTAGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------A---CTATCG--AT-AAATAGTATTTTAGGTAATGCATAA------------------------CCTTAAGGTAGTACAATGTATCAAAG--CGTATGAATACTAGTAAAACTGCA------TAATT-------A-------TC-------AACAGTGTAT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAA--AACTC----TATCGTTTTATAATTAACTG-AA-AGT-CATTCCTACT-ACA-ATAcggtgtaagttacctttagcgtctgtaaaaactaagtacagaatacacatttattctggtttatatagccaacatagacaaagtatcacagaaaaagcatgcagcatgaaatttacatgagaaagtatagtttaacttattcattgtagccgtctgacaattgtacttattttatgaaacacacttttataagtaataataaataatattataacataagcatatttattatgaaacaaaaagataacattgaaatatgtatgttagaagaactatgattaattaattattgtaatttctttatttgtccttaaaatgtctatgatgtcaagtagacagtttatgctagcacaacaataaaagtaactatcgataaatagtattttaggtaatgcataaccttaaggtagtacaatgtatcaaagcgtatgaatactagtaaaactgcataattatcaacagtgtatattcaatttagatttataaagattgcaaaactctatcgttttataattaactgaaagtcattcctactacaata
gi|8 : ttgtagctgtcttacgccgtcttcccaagattcgttcttatagtttgcgggtggagataaagaaagtaacaaaacataagaaggggaacatgagtttttatttctttttattagaatgtataaatacatttcaataagtatattttgatattattttagaaatACTGTACTAGTCT-AAGAC-GTCTTCACT-A-G-ATTTGTCTTTACA-T-T-TTACAAG-T-GCA-A--AT-------ATA-GAGAATAACAAAACATAAGTCGGGG--------A-T-TTT--G---------GATTT-AGTAGAATGATTG--AATAG-ATTTCAATAAAAAAAAATCATATTATTTTAGAAGGT-----------------GTTACTAT---TTAGT--GAAA------ATT-AT----------GATTAAAAAAAGAG---A----GATA-AGATTTA
gi|8 : tATTTATTCTGGCTTATATACCCAACACA---------------------AAAAAGCATGCAACATGAAA---ATTACATGAGA----AAGTATAGTT-AAGTCATATTTATTGTAGCCGTTTGACATCTATGTTGTATTT--TT------T--AAGAAATACACCTTTATAA----A-TAATAATAAATATTATA------G--ACATATTTATATCGAAACAG-AAAGATAACATTGAAATCTGTATGTAA----------TAAGAAC-TA--TAATTAATTAGT--TGTAACAATTTCTTTATTTGACCTTTGAATGTC-CAAGAGGTCAAACGGAC--AGTTTATGCTATAAACACAACAA-AAAA--------------A------T---ATATCT--AT-ATATAGTAATCAAGGTAACGGATAA------------------------CCGTAAGGAAGTTAAAAATATCAAAG--TGTATGAATACTAGT-AAACTGCA------TATTT-------A-------TC-------A-------AT-------A---------T-TCAAT-ATTG--AT-----TTATAACAATT--AT--AATCA----TGG--TTTTATAATTAAATGAAA-AGT-AATTCCTGCT-Attctggcttatatacccaacacaaaaaagcatgcaacatgaaaattacatgagaaagtatagttaagtcatatttattgtagccgtttgacatctatgttgtattttttaagaaatacacctttataaataataataaatattatagacatatttatatcgaaacagaaagataacattgaaatctgtatgtaataagaactataattaattagttgtaacaatttctttatttgacctttgaatgtccaagaggtcaaacggacagtttatgctataaacacaacaaaaaaatatatctatatatagtaatcaaggtaacggataaccgtaaggaagttaaaaatatcaaagtgtatgaatactagtaaactgcatatttatcaatattcaatattgatttataacaattataatcatggttttataattaaatgaaaagtaattcctgctatttcttctttcctcataatactgcctttttcggtaaaaaatttca
gi|9 : tactgtactagtctaagacgtcttcactagatttgtctttacattttacaagtgcaaatatagagaataacaaaacataagtcggggattttggatttagtagaatgattgaatagatttcaataaaaaaaaatcatattattttagaaggtgttactatttagtgaaaattatgattaaaaaaagagagataagTACAAGTTTTAAACTTATATTGCGCCTGTGAAA-CTCAGTACAGTATACACATTTATTCTGGCTTATATAATCAACCCA--------------ATCATAGACAAATTTTGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGAAGCTGTGTGACATCTATATTGTACTT--TA------T---ACAAACACACTTTTATAAG-TAA-TAATAAATAATATTACACACTTAA--ACATATTTATAATGGAACAG-AAAGAGAACATTGAAATCTGTATGTTA----------TAAGAAC-TA--TAATTAATTAGT--------------TTTATTTGACCTTTAAATGTC-CAAGATGTCAAGAAGAC--AGTTTATGGT---AGC---ACAATAGAAGTATATAT------A------T---ATATAT--AT-AAACAGTATTTAAGGTAATGAATAGGTACTACTAAAACCCGGCCAGGTTCCTTAGGTTAGTAAAAAGTATCTATGTTTATATCAATACTGGTAAAACTGCC------TAATT-------A-------TC-------A-------ATAGTGAAAA---------T-TAGAT-TTAG--AT-----TTATAAAGATTGGAG--AACTC----TGT--CTTTATAATTAACTGAAA-AGT-AATTCCTGCT-ACA-ATATA-TATTtttcttctttcctcataatactgcctttttcggtaaaaaatttca
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|27 ): ACTGGAACTGGAAAAGGACCGCTTCTTATCTTTTTGGATCAGCCCATTTATATCACTGGAACTGGAAAA
Unaligned ( gi|29 ): TTATTTTCCCATTTTTTATTTTTTAAAAATAACAAAAAAAATGTTAACAAAGAAATACTGTTTAACCT
Unaligned ( gi|32 ): CAACCACAGGTGTCATAGTAGGGTCGCCCTAAAAAAAACTTGTTTTCCA
Alignments
lowQualScore : 1 1 22222 11111111111 2222222222 111111111 5555555555555555555555555 1111 1111 111111 1111 22222222 11111111111 11 11111 11111111111111111111 222222222222222222222222 111 11111111111111111111111111111111 33333333333333333 11
lowQualScore : 777 7 99 3 3 0 3 3 4 22222 3 55 77777777777 2 0 8 4 2222222222 4 55 88 666666666 77 6666666666666666666666666 2222 55 1111 111111 5 3333 1 0 99999999 1 77 1 9999 55 4 1 2 777777 444 1 6666 2 2 44 999999 44 33 2 1 33333333333 2 33 11 1 00000 2 33 444 33333333333333333333 444 0 66 2 222222222222222222222222 33 4 222 666666 22222222222222222222222222222222 99999999999999999 2 4 33 55555 33 5555 66 1 2 2 2 33 3 22 0
lowQualScore : ... . .. . . . . . . ..... . .. ........... . . . . .......... . .. .. ......... .. ......................... .... .. .... ...... . .... . . ........ . .. . .... .. . . . ...... ... . .... . . .. ...... .. .. . . ........... . .. .. . ..... . .. ... .................... ... . .. . ........................ .. . ... ...... ................................ ................. . . .. ..... .. .... .. . . . . .. . .. .
lowQualScore : 111 3 99 6 6 9 6 6 5 11111 6 00 00000000000 2 5 0 0 3333333333 0 55 99 000000000 44 5555555555555555555555555 7777 55 5555 555555 0 6666 4 8 00000000 5 99 0 4444 55 0 4 1 777777 777 5 1111 9 9 66 666666 66 99 9 0 88888888888 7 77 00 5 00000 7 44 444 00000000000000000000 444 4 55 4 666666666666666666666666 44 1 444 888888 99999999999999999999999999999999 99999999999999999 4 7 22 99999 44 3333 99 2 4 4 5 77 5 33 8
consensus : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAACATGAA-T-TTTNTTTATTT--T-TTTAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
Reference ( family-624 ) : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAACATGAA-T-TTTNTTTATTT--T-TTTAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
gi|1 : TATATAGCCAACATAGACAAA------ATATCACAGAAAAAGCATGCAACATAAGA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAGTAATAATAAATAATATTATACAACTAT--ACATATGTATAATGGAACAGAAAAAAGAACATTGAAATCAGTATGTAG----------TAAGAAC-TA--TAAGGATTTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATATCAAT-AAAAAGTTTTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTATAATGCATCAAAG--TGAAT-AATACTAGTAAAACTGCATATTAA------TT-------A-------TC-------G-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTA-AATTTACAGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTA
gi|10 : TCC-CC-A-G-ATTCGTACTTACA-T-T-TTACA-TGC-GAA-A--AT-------ATA-GAAAGTAACACA-CATATGTAGAGGAATAT--A-C-TTT-TTTATTTCAT-TTCAGTAGAACGATCATTGATATTGTTT---TAG---------GT-----TG-------T-----------------GTTACTA----TT--T--A-AA------ATT-Attctatatgtaattcttttaataacaatttataacatcccgtgactcattatattaaatcgtaaattgtgtaataaaagttttattgaaactggaagaggacctctttttatctttttaggaacagtttattaataccgtgccaccagaacaaaacgttggtgcagaatcaatggatcccagccactggtgagttatctctcagagtagacaagatggaggtcgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggtgtcatagtagggtcgccctaaaagaaacttgttttccat
gi|10 : taGATACATAGCT--CGTTGACTTGCAAGATGAAAGTT----ACGTTTC--TTGTTTGTGAAA------------------ATTTATTATGGCTTACATAGCCAACATAGACGAA------GTATAACAGAAACATTATGCAACATGAAA---TTTAAATCAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGATATATGTAGTGTATAT--TT------TAAAAAAAATACACTTTTATAAGTGACAATAAATACTAATATACACTTAA--ATATAGTTATATTGAAACCG-AAAGATAGCA-TG-----TACATGTAA-----------AAGAAC-TG--TAATTAATTAGT--Tcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgg------T------A------T---ATATAT--AT-AAACAATATTTAAAGAAATCAATTA------------------------CCTTCA-GT--TAAAATtgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttaTTAAAATAAACTGATA-AAT-CATTCTTGCT-ACA-CT-TT-T-CTCaaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagTTGTAACAGTTT-AAGACCGCCTTC-C------ACTCGTCCTTACA-TAT-T-ACA-T-TTGAA-A--AT-------A-A-GAAAGTACCAAAGCATATGTTTGTAAACGTGGA-T-TTTTATT-TTC--T-TTTAGCAGAA-GATTT--AATGG-ATTTCAATAA---------GTT-TATTT-------T-----------------GGTAATAT---TT--T--A-GA------Aatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tA--GCGTCTGTGAAA-C-------AAAATACTCATTTATTCTGGCTTATGTAGCCAACATAGACAGATTGCATGTATCACAGAAAAAGCA----ACATAAAA---TTTACCTGAGA----ATGTATAATT-TAACTA-ATTCATTGTAGCCGTCTGACATCTTTATT----TT------------------ACA----TTTATGAGTTATAATAAATAATATCACACACTTAA--ATATAGTTATAATGAAACTT-AAAGgatgttgttatattaaagtatttcttgaaaagagcgtctgtgaaacaaaatactcatttattctggcttatgtagccaacatagacagattgcatgtatcacagaaaaagcaacataaaatttacctgagaatgtataatttaactaattcattgtagccgtctgacatctttattttacatttatgagttataataaataatatcacacacttaaatatagttataatgaaacttaaag
gi|12 : tttgtaacagtttaagaccgccttccactcgtccttacatattacatttgaaaataagaaagtaccaaagcatatgtttgtaaacgtggatttttattttcttttagcagaagatttaatggatttcaataagtttattttggtaatattttagaagatgttgttatattaaagtatttcttgaaaagATTGTAACAGTCT-AAGGCCGTCTTCACT-A-G-ATTCGTTCTTACA-T-T-TTACAAG-T-GAA-A--AT-------A-AAGAAAGTAACAAAACATACGAAGGGGAATTTGGACT-TTTGTTTA--A--T-TTTAGTAGAATGAATA--AATG--ATTTCAATAA---------GTA-TATTT-------TTTATTATCTTAGAAGACGTTACTATTTATT--T--A-AAACATTGATT-TGA-AAAAGAGAGATTAGAAATAGAAGGCA----GATAGCGACTACGCTCGCGTTCACTAGTAAGGACGAAGTT----ACCTTTG--GCGTCCGC-CAA-CTAAGAACACGACATATATTTATTCTGGTTTATATACTCAACAT---TACG------GCAGCACAGAGGGGACATGCGAAA--AAATGTTTTATCT
gi|13 : ATACGATACACTTAA--ACATATCTATAATGAAGCAG-A----TAACATTAAAATATGTATATTA--------------AA---A--TAACTAATTACT--T-TAGTAATTTCTTTATTTGACCTTTAAATGTC-CAAGATGTTAAGTGGAC--AGTCTATGCT---AGCATAACAATAGAAG------T------A------T---ATATCT--AT-ACATAGTATTTTAGGAAA------------------------------------------TAAAATGTATCAAAG--TGTATGAATACTAGTGAAACTGCA---TAA------AT-------A-------TG-------A-------AT-------A---------G-TAAATATTAT--ATAATGGTT-TAAAGATTGCAG--AACTC----TATGGTTTTATAATTAACTGAAA-AGT-AATTACAGCT-ACA-ATATT-cggtcccaaggcataat
gi|14 : CATTGAAATCTGTATGTAACAAGAACTAGTAAGAAC-TA--GAATTAATTA-T--TATAGTAATTTATTTATTTTATGTTTAAATGTC-CAAGCTGTCAAGTGGATGTAGTTTATGCT---AGTACAACAATAGAAG------T------A------T---ATATAA--AT-AAATAGTATTTA-GGTCATGGATAA------------------------CCATAAGGTAGTTAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------GT-------A-------TC-------A-------Actgaccatatacaattacgttccagcaggaaaaataacatttatgttactcattgtat
gi|14 : gcg-------AT-------A---------T-TCAAT-TCAA--AT-----TTATAAAGATCGCAG--AACTT----TAT--TTTTATAATTAACTG-AA-ACT-CATTCCTGTT-ACA-agtgtatgaatactagtaaaactgcataagtatcaaagtgtatattcaattcaaatttataaagatcgcagaactttatttttataattaactgaaactcattcctgttacaa
gi|15 : gcgcattgaaatctgtatgtaacaagaactagtaagaactagaattaattattatagtaatttatttattttatgtttaaatgtccaagctgtcaagtggatgtagtttatgctagtacaacaatagaagtatatataaataaatagtatttaggtcatggataaccataaggtagttaaatgtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgt----GAGAGAGGTTTAGCT--CGTTGACTAGTAAGGTGAAAGTT----ACATTTA--ACAGTTGTGAAA-CTAAGTGCAGAATACAC----ATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGACAAA-TATGCAACATGAAA---AT------AAA----TAGTAT--TT-AAGGTA-ATa
gi|15 : --AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAAGTAGTAAAATGTGTAAGAT--TATATTAATACTAGTAAAACTACA---TAACAGTAATT-------A-------TC-------A-------AT-------AGTGAATG--T-TCAAT-TTAG--AT-----TTATAAAGATTGCAT--AACTC----TAA--TTTTATAATTAATTGAAA-AGT-CATTCCTGCT-ACA-AT-TC-TACgaataaccttaaagtagtaaaatgtgtaagattatattaatactagtaaaactacataacagtaattatcaatagtgaatgttcaatttagatttataaagattgcataactctaattttataattaattgaaaagtcattcctgctacaattctaccaaattaacggttctcagaca
gi|16 : gagagaggtttagctcgttgactagtaaggtgaaagttacatttaacagttgtgaaactaagtgcagaatacacattctggcttatatagccaacatagacaaagtatcacagacaaatatgcaacatgaaaTGTATGTTA----------TAAGAAC-AA--TTATTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T-------------------------------TTGCATCTAAGGTAATGAATAA------------------------CCTTAAGGTAATAAAATATATCAAAG--TGTATGAACACTGGGAAAATTGCA---TAA------TTGTTTATAA-------TG-------A-------AT-------A---------T-TCAAT-TTAT--AT-----TTATAAAGATTGCAG--AACTC----TAT--TGTTATAATTAACTAAAAGAGT-CATTCCTGCT-ACA-ATATT-caaattaacggttctcagaca
gi|17 : gtaAAGAACGTACGTAGTCAATTGGT--TATAGTTATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---TGCACAACAACAGAAG------G------G------T---ATGTCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------TCTTAAGGTAGCAAAATATATTAAAG--TGTATGAATACTGGAAAACCTGCA---TAA------TT-------A-------TC-------A-------AT-------AG--------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AAC-----------TTTTATAATAAAC-AAAA-AATACATTCTTGCT-ACA-atcattatgtatctcagaattcacagctttact
gi|18 : catatacttagctgggttcttgaTGTT-CAAGATGTGAAATGGAC--AGCTTATGCT---AGCAGAACACCATAAG------TACGTGGA------T---ATTTCT--AT-AAATAGTATTTAACGTAATGAATGG------------------------CTTTAAG---------TGTATCTAAG--TGTATGAATACTAGTAAAACTGAA---AAA------------------------C-------AG------GT-------T---------T-TTAGT-TTGGTTAT-----TCATATATATTGC
gi|19 : AGAGACTCGGGT--CGTTGACTAGCAAGGTGAAAGTT----ACTGTTA--GCGTCTGAGAAA-CTAAGTACAGAAAACACATTTATTCTGGCTTATATAGCCAACATAGACAAG------GTATCACAGAAAAAGCAAACAACATGAAA---TTTACCAGAGA----AAGTACAATT-AAACTA-ATTCATTcatcaagttatttacagcaatggcataacacatcataagtggataaatgaaaagaaatatccgcagttttt
gi|2 : ttagttatagagatcgaactatccaaccgagtaagTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATAAAA---TTTACCAGCGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCATTTAATATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAGTAATAATAAATAATATTATACACCTAGATACATATGTATAATGGAATAG-AAAGAGAACATTGAAATCAGTATGTAA----------TAAGAAC-TC--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGCGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATGTCAATAAAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACTAGTAAAACTGCATATTAA------TT-------A-------TC-------A-------GT-------ATTCAGTATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTAT-ATTTACCGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTAcaaagacgtatttag
gi|20 : TAGTATTTAAGGTAATGAGTAA------------------------CCTTAAGATAG-AAAATGT----------------------GTAAAACTGCA---TAA------TT-------A-------TCAATAGTGA-------AT-------A---------T-TTAAT-GTAG--AT-----TTATAAAGATTATAGTTAA--------GA--TTTTATCATTAATTGAAA-AGT-AATTCCTGCTAACATACATG-TACTttctatacgtaattcatttaataactatttgtaacatcccatgactcgttatattaaatcgtaaattgtgtaataaaagttttaatgaaactgaaagaggacctctttttatctttttaggaacagtccattaataccgttccaccagaacaaaacgttggtgcagaatcaatggataccagccactggtgagttatctctcagagatggaggttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggcgtcatagtagggtcgccctaaaaaaacttgttttccat
gi|21 : GTAACAATCT-ACGACCGTTTTC-TTTA-G-AGTCGTCCCTACA-T-T-TTACA-TGT-GGAGA--AT-------A-A-GAAAATTACAAAACATAAGTAGGGGAATATGAG-T-TT--TTAATTTCCT-TTTAGTAGAATGATTA--AATAT-ATTTGGATA-----------T--TATCT-------TAGAAGAA----------GTTACTA----TT--T--A-AA------ATT-Agaagcattttttttttacaatggcataatgtagttattttatt
gi|22 : GTAACAGTCT-ATGAACGTCTTC-CTTA-G-ATTCGTCCTTAAAAT-T-T-ACA-T-G-GGG-ATAAT-------A-AAGAAAGTGACTAAACATAAGTACAGGAACATGAT-T-TTTATTTATTT--T-T--AGTCGAATGATTA--AATGG-ATTTCGATAA---------GTA-TACTT-------T-----------------GATATTAT---TT--TTGG-AG------ATtga
gi|23 : ATAAACAAA------TTATTACAGAAACAGCATACAACATGAAA---TTT----GAAATACAAAATATAGTT-AAACTA-ATCCAGTGTAGCCGTTTGACATCTATATTGCAgt
gi|24 : CATTATAGCCGTTTG-----TATATTGTACTT--TTATTTTTT--AAGTAATACACTTTTATAAGTAATAATAAATAATATAATACACTAAA--ACACATTTATATTGAAACGG-GAAAAgatgatatcataaagtgttttactcagtagataaactataacaagggtcccacttattat
gi|25 : AGAAC-GA--TAATCAATTAGT--TATAGTAATTTCTTTATTTGGC-TTTTAATGTC-CAAGATGTCGAATGGAC--ACTTTATGCT---AGCACAACAATAGAt
gi|26 : tctgaattaaaacAACTGCA---TAA------TT-------A------------------------AT-------T---------TATCAATAGTGA--AT-----TTATAAAGATTACAG----TTG----TGG--TTTTATAATTAACTG--A-AGT-TAT
gi|28 : TGTAACAGTCT-ATGACTGTCTTC-CC-A-ATATTCGTCCTTACA-T-TAT-ACA-G-A-GGG-A--GA-------G-A-GAGAGT
gi|3 : gATTGTAACAGTCT-CAGACCGTCTTC-CC-A-G-TTTTGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A---AAGTAACACACGAAAAGTAGAGGAATATAAAATATTTCTTTCTTT--TCTTTTGTGGAATAATCA--AATGT-ATTTCAATGA---------GTA-CATTT-------T-----------------GTTACTAT---TT--C--G-AA------ATC-AGA-AAGAGAAAGATCAGAAAGAGAG---A----GACAGAGACTTAGCT--CTGTGGCAAGTAAGGTGTAAGTT----ACCTTTA--GCTTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAATACAAA------GCATTACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAGCCA-ATTCATTGTAGCTGTTTGACATCTATATTGTAATT--TT------T--AAGAAACACACTATTACAAATA-TAATTAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATATCA----------TAAGAAC-AA--TACTTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------G------G------T---ATATCT--AT-AAATAATATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGCAAAATATATCAAAG--TGTATGAATACTGGAAAACCTGCA---TAA------TT-------A-------TT-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTCTATTTAT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-TTATT-TGCTTTACActa
gi|30 : ACTTCTAGAAGTAATACTAAATAATATTATACACCCAA--ACATA-TTATAATGAAACAG-AAaccatactgaaataatttcaa
gi|31 : TGGAC--AATTTACGCT---AGCACAACAATATATG------T------A------T---ATACTT--AT-AAATAGTA---AAAGTA
gi|4 : TAACAGTCT-CTGACCGTTTCC-CC-A-G-TTTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-AAGGAAGTAACAAACAAAAAGTAGGGGAATATGAA-A-TATATATTTCT--T-TTTAGGGGAATAATTA--AATGT-ATTTCAATGA---------GTA-TAATT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-CAGAGAAAGATCAGAAAGAGAG---AAAGAGATAGAGACTTAGTT--TGGTGACGAGTAAGGTGTAAGTG----ACCTTTA--GCATCTGTGAAA-GTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACATTTTTATAAATAATAATAAATAATATTATACACTTAA--ACATGTTTATAACGAAACAA-AAAGAGAACATTGAAATCAAAATGTTA----------TAAGAAC-AG--TAATTAATTGGT--TATAGTAATTGCTGTATTTGACCTACTTATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATATATCAAAG--TGTATGAATATTCGAAAAATTGTA---TAA------TT-------G-------TT-------A-------AT-------A---------A-TGAAT----G----------TATAATGATTGCAG--AACTC----AAT--TTTTATAATTAGCT-AAA-AGT-TATTACTGCT-ACA-CTAT----CTCTAC
gi|5 : ttTGTAACAGTCT--------TCT---CA-A-G-ATTCGTCCTTACATT-T-T-TCATT-T-TGA-A--ATAAACTTAA-A-GGAAATAACAAAACAAAAGTAGGGGAACATGAA-T-TTTTATT-TCT--T-TTTAGTAGAATTATTA--AATGA-ATCAAAATAA---------GTA-TATTTTGAATA-T-----------------GTTAATA----TT--T--A-AA------GTTCCGATTTGAAAGAGATT-GACAGATAG-----------AGAGACTTCGCT--CATTGACTAGTAAGGTGGAAGTT----ACCTTCA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTATGGCCTATATAGCCAACATAGACAAA------GTAACACAGAAAAAGCATGCAATATGAAA---TTTACCTTAGA----AAGTATAGTCAAAACTA-ATTCATTGTATCCGTTTTACATCTATATTGTACTT--TT------T--AAGAA--ACACTTTTATAAGTAATAATAAATAGTGTTTTACACTTAA--ACATGTTTATAATGAAACAG-AAAGGGAACATTGAAATCTGTAT-TAA----------TAAGAAC-TA--TAATTAATTAGT--CATAGTAATTTCTTT-TTTTACTTTTAAATGTCTCAAGACGTCAAGTGAAC---------------AGCACAACAATAGAAA------T------ATACATGT---ATATCA--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CTTTAAGGAAGTAAAATGTATCAAAT--TGTATGAATACTAGTAAAACGGCA---TAA------TT-------AATAATAGCG-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTT----TAT--TTTTATAATTAAATGAAA-AGT-CATTCCTGCT-ACA-GTtatattacatctcattgtatttccaggcat
gi|6 : cTATATAGCCAACATAAATAAA------GTATTATAGAAAAAGCATGCAACATATAA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATAATGTACTT--TT------T--AAGAAACACACTTTTATAAGTATTAATAAATAATATTATACACCTAT--ACATATGTATAATGGAACAA-AAAGAGAACATTGAAATCAGTATGTAA----------TAGGAAC-TA--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTTTGCT---AGCACAACAATAGAAG------T------A------TATAATATCA--AT-AAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACAAATTAAACTGCATATTAA------TT-------A-------TC-------A-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACAC----TGT--TTTTAT-ATTTACAGTAA-AAT-CATTCCTGCT-ACA-CTATTCTATTCTA
gi|7 : TTGTAGCTGTCTTACG-CCGTCTTC-CC-AAG-ATTCGTTCTTATAGT-T-T-GCG-GGT-GGA-G--AT-------A-AAGAAAGTAACAAAACATAAGAAGGGGAACATGAG-T-TTTTATT-TCT--T-TTTATTAGAATGTATA--AATAC-ATTTCAATAA---------GTA-TATTT-------T-----------------GATATTAT---TT--TA-G-AA------ATT-Attctattctatacgttattcatttaataactatttataacatcccgtgactcgttatattaaatcgtaaattgtgtaataaaagttttattgaaactggaaatggacctctttttatctttttaggatcagtccattaataccgtgccaccagagcaaaacattggtgcagaaacaatggatcccagccactggtgagttatctctcaggggagacaagatggaagccga
gi|7 : TACGGTGTAAGTT----ACCTTTA--GCGTCTGTAAAAACTAAGTACAGAATACACATTTATTCTGGTTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAGCATGAAA---TTTACATGAGA----AAGTATAGTT-TAACTT-ATTCATTGTAGCCGTCTGACA-----ATTGTACTTATTT------T--ATGAAACACACTTTTATAAGTAATAATAAATAATATTATA-ACATAA--GCATATTTATTATGAAACAA-AAAGATAACATTGAAATATGTATGTTA----------GAAGAAC-TA--TGATTAATTAAT--TATTGTAATTTCTTTATTTGTCCTTAAAATGTC-TATGATGTCAAGTAGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------A---CTATCG--AT-AAATAGTATTTTAGGTAATGCATAA------------------------CCTTAAGGTAGTACAATGTATCAAAG--CGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------AACAGTGTAT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAA--AACTC----TATCGTTTTATAATTAACTG-AA-AGT-CATTCCTACT-ACA-ATAcggtgtaagttacctttagcgtctgtaaaaactaagtacagaatacacatttattctggtttatatagccaacatagacaaagtatcacagaaaaagcatgcagcatgaaatttacatgagaaagtatagtttaacttattcattgtagccgtctgacaattgtacttattttatgaaacacacttttataagtaataataaataatattataacataagcatatttattatgaaacaaaaagataacattgaaatatgtatgttagaagaactatgattaattaattattgtaatttctttatttgtccttaaaatgtctatgatgtcaagtagacagtttatgctagcacaacaataaaagtaactatcgataaatagtattttaggtaatgcataaccttaaggtagtacaatgtatcaaagcgtatgaatactagtaaaactgcataattatcaacagtgtatattcaatttagatttataaagattgcaaaactctatcgttttataattaactgaaagtcattcctactacaata
gi|8 : ttgtagctgtcttacgccgtcttcccaagattcgttcttatagtttgcgggtggagataaagaaagtaacaaaacataagaaggggaacatgagtttttatttctttttattagaatgtataaatacatttcaataagtatattttgatattattttagaaatACTGTACTAGTCT-AAGAC-GTCTTCACT-A-G-ATTTGTCTTTACA-T-T-TTACAAG-T-GCA-A--AT-------ATA-GAGAATAACAAAACATAAGTCGGGG-------A-T-TTTG--GA-------TTTAGTAGAATGATTG--AATAG-ATTTCAATAAAAAAAAATCATATTATTTTAGAAGGT-----------------GTTACTAT---TTAGT--GAAA------ATT-AT----------GATTAAAAAAAGAG---A----GATA-AGATTTA
gi|8 : tATTTATTCTGGCTTATATACCCAACACA---------------------AAAAAGCATGCAACATGAAA---ATTACATGAGA----AAGTATAGTT-AAGTCATATTTATTGTAGCCGTTTGACATCTATGTTGTATTT--TT------T--AAGAAATACACCTTTATAAATAATAATAAATA---TTATA------G--ACATATTTATATCGAAACAG-AAAGATAACATTGAAATCTGTATGTAA----------TAAGAAC-TA--TAATTAATTAGT--TGTAACAATTTCTTTATTTGACCTTTGAATGTC-CAAGAGGTCAAACGGAC--AGTTTATGCTATAAACACAACAA-AAAA--------------A------T---ATATCT--AT-ATATAGTAATCAAGGTAACGGATAA------------------------CCGTAAGGAAGTTAAAAATATCAAAG--TGTATGAATACTAGT-AAACTGCA---TAT------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-ATTG--AT-----TTATAACAATT--AT--AATCA----TGG--TTTTATAATTAAATGAAA-AGT-AATTCCTGCT-Attctggcttatatacccaacacaaaaaagcatgcaacatgaaaattacatgagaaagtatagttaagtcatatttattgtagccgtttgacatctatgttgtattttttaagaaatacacctttataaataataataaatattatagacatatttatatcgaaacagaaagataacattgaaatctgtatgtaataagaactataattaattagttgtaacaatttctttatttgacctttgaatgtccaagaggtcaaacggacagtttatgctataaacacaacaaaaaaatatatctatatatagtaatcaaggtaacggataaccgtaaggaagttaaaaatatcaaagtgtatgaatactagtaaactgcatatttatcaatattcaatattgatttataacaattataatcatggttttataattaaatgaaaagtaattcctgctatttcttctttcctcataatactgcctttttcggtaaaaaatttca
gi|9 : tactgtactagtctaagacgtcttcactagatttgtctttacattttacaagtgcaaatatagagaataacaaaacataagtcggggattttggatttagtagaatgattgaatagatttcaataaaaaaaaatcatattattttagaaggtgttactatttagtgaaaattatgattaaaaaaagagagataagTACAAGTTTTAAACTTATATTGCGCCTGTGAAA-CTCAGTACAGTATACACATTTATTCTGGCTTATATAATCAACCCA--------------ATCATAGACAAATTTTGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGAAGCTGTGTGACATCTATATTGTACTT--TA------T--AC-AAACACACTTTTATAAGTAATAATAAATAATATTACACACTTAA--ACATATTTATAATGGAACAG-AAAGAGAACATTGAAATCTGTATGTTA----------TAAGAAC-TA--TAATTAATTAGT--------------TTTATTTGACCTTTAAATGTC-CAAGATGTCAAGAAGAC--AGTTTATGGT---AGC---ACAATAGAAGTATATAT------A------T---ATATAT--AT-AAACAGTATTTAAGGTAATGAATAGGTACTACTAAAACCCGGCCAGGTTCCTTAGGTTAGTAAAAAGTATCTATGTTTATATCAATACTGGTAAAACTGCC---TAA------TT-------A-------TC-------A-------ATAGTGAAAA---------T-TAGAT-TTAG--AT-----TTATAAAGATTGGAG--AACTC----TGT--CTTTATAATTAACTGAAA-AGT-AATTCCTGCT-ACA-ATATA-TATTtttcttctttcctcataatactgcctttttcggtaaaaaatttca
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|27 ): ACTGGAACTGGAAAAGGACCGCTTCTTATCTTTTTGGATCAGCCCATTTATATCACTGGAACTGGAAAA
Unaligned ( gi|29 ): TTATTTTCCCATTTTTTATTTTTTAAAAATAACAAAAAAAATGTTAACAAAGAAATACTGTTTAACCT
Unaligned ( gi|32 ): CAACCACAGGTGTCATAGTAGGGTCGCCCTAAAAAAAACTTGTTTTCCA
Alignments
lowQualScore : 1 1 22222 11111111111 2222222222 111111111 5555555555555555555555555 1111 1111 111111 1111 22222222 11111111111 11 11111 11111111111111111111 222222222222222222222222 111 11111111111111111111111111111111 33333333333333333 11
lowQualScore : 777 7 99 3 3 0 3 3 4 22222 3 55 77777777777 2 0 8 4 2222222222 4 55 88 666666666 77 6666666666666666666666666 2222 55 1111 111111 5 3333 1 0 99999999 1 77 1 9999 55 4 1 2 777777 444 1 6666 2 2 44 999999 44 33 2 1 33333333333 2 33 11 1 00000 2 33 444 33333333333333333333 444 0 66 2 222222222222222222222222 33 4 222 666666 22222222222222222222222222222222 99999999999999999 2 4 33 55555 33 5555 66 1 2 2 2 33 3 22 0
lowQualScore : ... . .. . . . . . . ..... . .. ........... . . . . .......... . .. .. ......... .. ......................... .... .. .... ...... . .... . . ........ . .. . .... .. . . . ...... ... . .... . . .. ...... .. .. . . ........... . .. .. . ..... . .. ... .................... ... . .. . ........................ .. . ... ...... ................................ ................. . . .. ..... .. .... .. . . . . .. . .. .
lowQualScore : 111 3 99 6 6 9 6 6 5 11111 6 00 00000000000 2 5 0 0 3333333333 0 55 99 000000000 44 5555555555555555555555555 7777 55 5555 555555 0 6666 4 8 00000000 5 99 0 4444 55 0 4 1 777777 777 5 1111 9 9 66 666666 66 99 9 0 88888888888 7 77 00 5 00000 7 44 444 00000000000000000000 444 4 55 4 666666666666666666666666 44 1 444 888888 99999999999999999999999999999999 99999999999999999 4 7 22 99999 44 3333 99 2 4 4 5 77 5 33 8
consensus : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAACATGAA-T-TTTNTTTATTT--T-TTTAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
Reference ( family-624 ) : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAACATGAA-T-TTTNTTTATTT--T-TTTAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
gi|1 : TATATAGCCAACATAGACAAA------ATATCACAGAAAAAGCATGCAACATAAGA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAGTAATAATAAATAATATTATACAACTAT--ACATATGTATAATGGAACAGAAAAAAGAACATTGAAATCAGTATGTAG----------TAAGAAC-TA--TAAGGATTTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATATCAAT-AAAAAGTTTTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTATAATGCATCAAAG--TGAAT-AATACTAGTAAAACTGCATATTAA------TT-------A-------TC-------G-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTA-AATTTACAGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTA
gi|10 : TCC-CC-A-G-ATTCGTACTTACA-T-T-TTACA-TGC-GAA-A--AT-------ATA-GAAAGTAACACA-CATATGTAGAGGAATAT--A-C-TTT-TTTATTTCAT-TTCAGTAGAACGATCATTGATATTGTTT---TAG---------GT-----TG-------T-----------------GTTACTA----TT--T--A-AA------ATT-Attctatatgtaattcttttaataacaatttataacatcccgtgactcattatattaaatcgtaaattgtgtaataaaagttttattgaaactggaagaggacctctttttatctttttaggaacagtttattaataccgtgccaccagaacaaaacgttggtgcagaatcaatggatcccagccactggtgagttatctctcagagtagacaagatggaggtcgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggtgtcatagtagggtcgccctaaaagaaacttgttttccat
gi|10 : taGATACATAGCT--CGTTGACTTGCAAGATGAAAGTT----ACGTTTC--TTGTTTGTGAAA------------------ATTTATTATGGCTTACATAGCCAACATAGACGAA------GTATAACAGAAACATTATGCAACATGAAA---TTTAAATCAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGATATATGTAGTGTATAT--TT------TAAAAAAAATACACTTTTATAAGTGACAATAAATACTAATATACACTTAA--ATATAGTTATATTGAAACCG-AAAGATAGCA-TG-----TACATGTAA-----------AAGAAC-TG--TAATTAATTAGT--Tcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgg------T------A------T---ATATAT--AT-AAACAATATTTAAAGAAATCAATTA------------------------CCTTCA-GT--TAAAATtgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttaTTAAAATAAACTGATA-AAT-CATTCTTGCT-ACA-CT-TT-T-CTCaaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagTTGTAACAGTTT-AAGACCGCCTTC-C------ACTCGTCCTTACA-TAT-T-ACA-T-TTGAA-A--AT-------A-A-GAAAGTACCAAAGCATATGTTTGTAAACGTGGA-T-TTTTATT-TTC--T-TTTAGCAGAA-GATTT--AATGG-ATTTCAATAA---------GTT-TATTT-------T-----------------GGTAATAT---TT--T--A-GA------Aatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tA--GCGTCTGTGAAA-C-------AAAATACTCATTTATTCTGGCTTATGTAGCCAACATAGACAGATTGCATGTATCACAGAAAAAGCA----ACATAAAA---TTTACCTGAGA----ATGTATAATT-TAACTA-ATTCATTGTAGCCGTCTGACATCTTTATT----TT------------------ACA----TTTATGAGTTATAATAAATAATATCACACACTTAA--ATATAGTTATAATGAAACTT-AAAGgatgttgttatattaaagtatttcttgaaaagagcgtctgtgaaacaaaatactcatttattctggcttatgtagccaacatagacagattgcatgtatcacagaaaaagcaacataaaatttacctgagaatgtataatttaactaattcattgtagccgtctgacatctttattttacatttatgagttataataaataatatcacacacttaaatatagttataatgaaacttaaag
gi|12 : tttgtaacagtttaagaccgccttccactcgtccttacatattacatttgaaaataagaaagtaccaaagcatatgtttgtaaacgtggatttttattttcttttagcagaagatttaatggatttcaataagtttattttggtaatattttagaagatgttgttatattaaagtatttcttgaaaagATTGTAACAGTCT-AAGGCCGTCTTCACT-A-G-ATTCGTTCTTACA-T-T-TTACAAG-T-GAA-A--AT-------A-AAGAAAGTAACAAAACATACGAAGGGGAATTTGGACT-TTTGTTTA--A--T-TTTAGTAGAATGAATA--AATG--ATTTCAATAA---------GTA-TATTT-------TTTATTATCTTAGAAGACGTTACTATTTATT--T--A-AAACATTGATT-TGA-AAAAGAGAGATTAGAAATAGAAGGCA----GATAGCGACTACGCTCGCGTTCACTAGTAAGGACGAAGTT----ACCTTTG--GCGTCCGC-CAA-CTAAGAACACGACATATATTTATTCTGGTTTATATACTCAACAT---TACG------GCAGCACAGAGGGGACATGCGAAA--AAATGTTTTATCT
gi|13 : ATACGATACACTTAA--ACATATCTATAATGAAGCAG-A----TAACATTAAAATATGTATATTA--------------AA---A--TAACTAATTACT--T-TAGTAATTTCTTTATTTGACCTTTAAATGTC-CAAGATGTTAAGTGGAC--AGTCTATGCT---AGCATAACAATAGAAG------T------A------T---ATATCT--AT-ACATAGTATTTTAGGAAA------------------------------------------TAAAATGTATCAAAG--TGTATGAATACTAGTGAAACTGCA---TAA------AT-------A-------TG-------A-------AT-------A---------G-TAAATATTAT--ATAATGGTT-TAAAGATTGCAG--AACTC----TATGGTTTTATAATTAACTGAAA-AGT-AATTACAGCT-ACA-ATATT-cggtcccaaggcataat
gi|14 : CATTGAAATCTGTATGTAACAAGAACTAGTAAGAAC-TA--GAATTAATTA-T--TATAGTAATTTATTTATTTTATGTTTAAATGTC-CAAGCTGTCAAGTGGATGTAGTTTATGCT---AGTACAACAATAGAAG------T------A------T---ATATAA--AT-AAATAGTATTTA-GGTCATGGATAA------------------------CCATAAGGTAGTTAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------GT-------A-------TC-------A-------Actgaccatatacaattacgttccagcaggaaaaataacatttatgttactcattgtat
gi|14 : gcg-------AT-------A---------T-TCAAT-TCAA--AT-----TTATAAAGATCGCAG--AACTT----TAT--TTTTATAATTAACTG-AA-ACT-CATTCCTGTT-ACA-agtgtatgaatactagtaaaactgcataagtatcaaagtgtatattcaattcaaatttataaagatcgcagaactttatttttataattaactgaaactcattcctgttacaa
gi|15 : gcgcattgaaatctgtatgtaacaagaactagtaagaactagaattaattattatagtaatttatttattttatgtttaaatgtccaagctgtcaagtggatgtagtttatgctagtacaacaatagaagtatatataaataaatagtatttaggtcatggataaccataaggtagttaaatgtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgt----GAGAGAGGTTTAGCT--CGTTGACTAGTAAGGTGAAAGTT----ACATTTA--ACAGTTGTGAAA-CTAAGTGCAGAATACAC----ATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGACAAA-TATGCAACATGAAA---AT------AAA----TAGTAT--TT-AAGGTA-ATa
gi|15 : --AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAAGTAGTAAAATGTGTAAGAT--TATATTAATACTAGTAAAACTACA---TAACAGTAATT-------A-------TC-------A-------AT-------AGTGAATG--T-TCAAT-TTAG--AT-----TTATAAAGATTGCAT--AACTC----TAA--TTTTATAATTAATTGAAA-AGT-CATTCCTGCT-ACA-AT-TC-TACgaataaccttaaagtagtaaaatgtgtaagattatattaatactagtaaaactacataacagtaattatcaatagtgaatgttcaatttagatttataaagattgcataactctaattttataattaattgaaaagtcattcctgctacaattctaccaaattaacggttctcagaca
gi|16 : gagagaggtttagctcgttgactagtaaggtgaaagttacatttaacagttgtgaaactaagtgcagaatacacattctggcttatatagccaacatagacaaagtatcacagacaaatatgcaacatgaaaTGTATGTTA----------TAAGAAC-AA--TTATTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T-------------------------------TTGCATCTAAGGTAATGAATAA------------------------CCTTAAGGTAATAAAATATATCAAAG--TGTATGAACACTGGGAAAATTGCA---TAA------TTGTTTATAA-------TG-------A-------AT-------A---------T-TCAAT-TTAT--AT-----TTATAAAGATTGCAG--AACTC----TAT--TGTTATAATTAACTAAAAGAGT-CATTCCTGCT-ACA-ATATT-caaattaacggttctcagaca
gi|17 : gtaAAGAACGTACGTAGTCAATTGGT--TATAGTTATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---TGCACAACAACAGAAG------G------G------T---ATGTCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------TCTTAAGGTAGCAAAATATATTAAAG--TGTATGAATACTGGAAAACCTGCA---TAA------TT-------A-------TC-------A-------AT-------AG--------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AAC-----------TTTTATAATAAAC-AAAA-AATACATTCTTGCT-ACA-atcattatgtatctcagaattcacagctttact
gi|18 : catatacttagctgggttcttgaTGTT-CAAGATGTGAAATGGAC--AGCTTATGCT---AGCAGAACACCATAAG------TACGTGGA------T---ATTTCT--AT-AAATAGTATTTAACGTAATGAATGG------------------------CTTTAAG---------TGTATCTAAG--TGTATGAATACTAGTAAAACTGAA---AAA------------------------C-------AG------GT-------T---------T-TTAGT-TTGGTTAT-----TCATATATATTGC
gi|19 : AGAGACTCGGGT--CGTTGACTAGCAAGGTGAAAGTT----ACTGTTA--GCGTCTGAGAAA-CTAAGTACAGAAAACACATTTATTCTGGCTTATATAGCCAACATAGACAAG------GTATCACAGAAAAAGCAAACAACATGAAA---TTTACCAGAGA----AAGTACAATT-AAACTA-ATTCATTcatcaagttatttacagcaatggcataacacatcataagtggataaatgaaaagaaatatccgcagttttt
gi|2 : ttagttatagagatcgaactatccaaccgagtaagTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATAAAA---TTTACCAGCGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCATTTAATATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAGTAATAATAAATAATATTATACACCTAGATACATATGTATAATGGAATAG-AAAGAGAACATTGAAATCAGTATGTAA----------TAAGAAC-TC--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGCGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATGTCAATAAAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACTAGTAAAACTGCATATTAA------TT-------A-------TC-------A-------GT-------ATTCAGTATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTAT-ATTTACCGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTAcaaagacgtatttag
gi|20 : TAGTATTTAAGGTAATGAGTAA------------------------CCTTAAGATAG-AAAATGT----------------------GTAAAACTGCA---TAA------TT-------A-------TCAATAGTGA-------AT-------A---------T-TTAAT-GTAG--AT-----TTATAAAGATTATAGTTAA--------GA--TTTTATCATTAATTGAAA-AGT-AATTCCTGCTAACATACATG-TACTttctatacgtaattcatttaataactatttgtaacatcccatgactcgttatattaaatcgtaaattgtgtaataaaagttttaatgaaactgaaagaggacctctttttatctttttaggaacagtccattaataccgttccaccagaacaaaacgttggtgcagaatcaatggataccagccactggtgagttatctctcagagatggaggttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggcgtcatagtagggtcgccctaaaaaaacttgttttccat
gi|21 : GTAACAATCT-ACGACCGTTTTC-TTTA-G-AGTCGTCCCTACA-T-T-TTACA-TGT-GGAGA--AT-------A-A-GAAAATTACAAAACATAAGTAGGGGAATATGAG-T-TT--TTAATTTCCT-TTTAGTAGAATGATTA--AATAT-ATTTGGATA-----------T--TATCT-------TAGAAGAA----------GTTACTA----TT--T--A-AA------ATT-Agaagcattttttttttacaatggcataatgtagttattttatt
gi|22 : GTAACAGTCT-ATGAACGTCTTC-CTTA-G-ATTCGTCCTTAAAAT-T-T-ACA-T-G-GGG-ATAAT-------A-AAGAAAGTGACTAAACATAAGTACAGGAACATGAT-T-TTTATTTATTT--T-T--AGTCGAATGATTA--AATGG-ATTTCGATAA---------GTA-TACTT-------T-----------------GATATTAT---TT--TTGG-AG------ATtga
gi|23 : ATAAACAAA------TTATTACAGAAACAGCATACAACATGAAA---TTT----GAAATACAAAATATAGTT-AAACTA-ATCCAGTGTAGCCGTTTGACATCTATATTGCAgt
gi|24 : CATTATAGCCGTTTG-----TATATTGTACTT--TTATTTTTT--AAGTAATACACTTTTATAAGTAATAATAAATAATATAATACACTAAA--ACACATTTATATTGAAACGG-GAAAAgatgatatcataaagtgttttactcagtagataaactataacaagggtcccacttattat
gi|25 : AGAAC-GA--TAATCAATTAGT--TATAGTAATTTCTTTATTTGGC-TTTTAATGTC-CAAGATGTCGAATGGAC--ACTTTATGCT---AGCACAACAATAGAt
gi|26 : tctgaattaaaacAACTGCA---TAA------TT-------A------------------------AT-------T---------TATCAATAGTGA--AT-----TTATAAAGATTACAG----TTG----TGG--TTTTATAATTAACTG--A-AGT-TAT
gi|28 : TGTAACAGTCT-ATGACTGTCTTC-CC-A-ATATTCGTCCTTACA-T-TAT-ACA-G-A-GGG-A--GA-------G-A-GAGAGT
gi|3 : gATTGTAACAGTCT-CAGACCGTCTTC-CC-A-G-TTTTGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A---AAGTAACACACGAAAAGTAGAGGAATATAAAATATTTCTTTCTTT--TCTTTTGTGGAATAATCA--AATGT-ATTTCAATGA---------GTA-CATTT-------T-----------------GTTACTAT---TT--C--G-AA------ATC-AGA-AAGAGAAAGATCAGAAAGAGAG---A----GACAGAGACTTAGCT--CTGTGGCAAGTAAGGTGTAAGTT----ACCTTTA--GCTTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAATACAAA------GCATTACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAGCCA-ATTCATTGTAGCTGTTTGACATCTATATTGTAATT--TT------T--AAGAAACACACTATTACAAATA-TAATTAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATATCA----------TAAGAAC-AA--TACTTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------G------G------T---ATATCT--AT-AAATAATATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGCAAAATATATCAAAG--TGTATGAATACTGGAAAACCTGCA---TAA------TT-------A-------TT-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTCTATTTAT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-TTATT-TGCTTTACActa
gi|30 : ACTTCTAGAAGTAATACTAAATAATATTATACACCCAA--ACATA-TTATAATGAAACAG-AAaccatactgaaataatttcaa
gi|31 : TGGAC--AATTTACGCT---AGCACAACAATATATG------T------A------T---ATACTT--AT-AAATAGTA---AAAGTA
gi|4 : TAACAGTCT-CTGACCGTTTCC-CC-A-G-TTTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-AAGGAAGTAACAAACAAAAAGTAGGGGAATATGAA-A-TATATATTTCT--T-TTTAGGGGAATAATTA--AATGT-ATTTCAATGA---------GTA-TAATT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-CAGAGAAAGATCAGAAAGAGAG---AAAGAGATAGAGACTTAGTT--TGGTGACGAGTAAGGTGTAAGTG----ACCTTTA--GCATCTGTGAAA-GTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACATTTTTATAAATAATAATAAATAATATTATACACTTAA--ACATGTTTATAACGAAACAA-AAAGAGAACATTGAAATCAAAATGTTA----------TAAGAAC-AG--TAATTAATTGGT--TATAGTAATTGCTGTATTTGACCTACTTATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATATATCAAAG--TGTATGAATATTCGAAAAATTGTA---TAA------TT-------G-------TT-------A-------AT-------A---------A-TGAAT----G----------TATAATGATTGCAG--AACTC----AAT--TTTTATAATTAGCT-AAA-AGT-TATTACTGCT-ACA-CTAT----CTCTAC
gi|5 : ttTGTAACAGTCT--------TCT---CA-A-G-ATTCGTCCTTACATT-T-T-TCATT-T-TGA-A--ATAAACTTAA-A-GGAAATAACAAAACAAAAGTAGGGGAACATGAA-T-TTTTATT-TCT--T-TTTAGTAGAATTATTA--AATGA-ATCAAAATAA---------GTA-TATTTTGAATA-T-----------------GTTAATA----TT--T--A-AA------GTTCCGATTTGAAAGAGATT-GACAGATAG-----------AGAGACTTCGCT--CATTGACTAGTAAGGTGGAAGTT----ACCTTCA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTATGGCCTATATAGCCAACATAGACAAA------GTAACACAGAAAAAGCATGCAATATGAAA---TTTACCTTAGA----AAGTATAGTCAAAACTA-ATTCATTGTATCCGTTTTACATCTATATTGTACTT--TT------T--AAGAA--ACACTTTTATAAGTAATAATAAATAGTGTTTTACACTTAA--ACATGTTTATAATGAAACAG-AAAGGGAACATTGAAATCTGTAT-TAA----------TAAGAAC-TA--TAATTAATTAGT--CATAGTAATTTCTTT-TTTTACTTTTAAATGTCTCAAGACGTCAAGTGAAC---------------AGCACAACAATAGAAA------T------ATACATGT---ATATCA--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CTTTAAGGAAGTAAAATGTATCAAAT--TGTATGAATACTAGTAAAACGGCA---TAA------TT-------AATAATAGCG-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTT----TAT--TTTTATAATTAAATGAAA-AGT-CATTCCTGCT-ACA-GTtatattacatctcattgtatttccaggcat
gi|6 : cTATATAGCCAACATAAATAAA------GTATTATAGAAAAAGCATGCAACATATAA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATAATGTACTT--TT------T--AAGAAACACACTTTTATAAGTATTAATAAATAATATTATACACCTAT--ACATATGTATAATGGAACAA-AAAGAGAACATTGAAATCAGTATGTAA----------TAGGAAC-TA--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTTTGCT---AGCACAACAATAGAAG------T------A------TATAATATCA--AT-AAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACAAATTAAACTGCATATTAA------TT-------A-------TC-------A-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACAC----TGT--TTTTAT-ATTTACAGTAA-AAT-CATTCCTGCT-ACA-CTATTCTATTCTA
gi|7 : TTGTAGCTGTCTTACG-CCGTCTTC-CC-AAG-ATTCGTTCTTATAGT-T-T-GCG-GGT-GGA-G--AT-------A-AAGAAAGTAACAAAACATAAGAAGGGGAACATGAG-T-TTTTATT-TCT--T-TTTATTAGAATGTATA--AATAC-ATTTCAATAA---------GTA-TATTT-------T-----------------GATATTAT---TT--TA-G-AA------ATT-Attctattctatacgttattcatttaataactatttataacatcccgtgactcgttatattaaatcgtaaattgtgtaataaaagttttattgaaactggaaatggacctctttttatctttttaggatcagtccattaataccgtgccaccagagcaaaacattggtgcagaaacaatggatcccagccactggtgagttatctctcaggggagacaagatggaagccga
gi|7 : TACGGTGTAAGTT----ACCTTTA--GCGTCTGTAAAAACTAAGTACAGAATACACATTTATTCTGGTTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAGCATGAAA---TTTACATGAGA----AAGTATAGTT-TAACTT-ATTCATTGTAGCCGTCTGACA-----ATTGTACTTATTT------T--ATGAAACACACTTTTATAAGTAATAATAAATAATATTATA-ACATAA--GCATATTTATTATGAAACAA-AAAGATAACATTGAAATATGTATGTTA----------GAAGAAC-TA--TGATTAATTAAT--TATTGTAATTTCTTTATTTGTCCTTAAAATGTC-TATGATGTCAAGTAGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------A---CTATCG--AT-AAATAGTATTTTAGGTAATGCATAA------------------------CCTTAAGGTAGTACAATGTATCAAAG--CGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------AACAGTGTAT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAA--AACTC----TATCGTTTTATAATTAACTG-AA-AGT-CATTCCTACT-ACA-ATAcggtgtaagttacctttagcgtctgtaaaaactaagtacagaatacacatttattctggtttatatagccaacatagacaaagtatcacagaaaaagcatgcagcatgaaatttacatgagaaagtatagtttaacttattcattgtagccgtctgacaattgtacttattttatgaaacacacttttataagtaataataaataatattataacataagcatatttattatgaaacaaaaagataacattgaaatatgtatgttagaagaactatgattaattaattattgtaatttctttatttgtccttaaaatgtctatgatgtcaagtagacagtttatgctagcacaacaataaaagtaactatcgataaatagtattttaggtaatgcataaccttaaggtagtacaatgtatcaaagcgtatgaatactagtaaaactgcataattatcaacagtgtatattcaatttagatttataaagattgcaaaactctatcgttttataattaactgaaagtcattcctactacaata
gi|8 : ttgtagctgtcttacgccgtcttcccaagattcgttcttatagtttgcgggtggagataaagaaagtaacaaaacataagaaggggaacatgagtttttatttctttttattagaatgtataaatacatttcaataagtatattttgatattattttagaaatACTGTACTAGTCT-AAGAC-GTCTTCACT-A-G-ATTTGTCTTTACA-T-T-TTACAAG-T-GCA-A--AT-------ATA-GAGAATAACAAAACATAAGTCGGGG-------A-T-TTTG--GA-------TTTAGTAGAATGATTG--AATAG-ATTTCAATAAAAAAAAATCATATTATTTTAGAAGGT-----------------GTTACTAT---TTAGT--GAAA------ATT-AT----------GATTAAAAAAAGAG---A----GATA-AGATTTA
gi|8 : tATTTATTCTGGCTTATATACCCAACACA---------------------AAAAAGCATGCAACATGAAA---ATTACATGAGA----AAGTATAGTT-AAGTCATATTTATTGTAGCCGTTTGACATCTATGTTGTATTT--TT------T--AAGAAATACACCTTTATAAATAATAATAAATA---TTATA------G--ACATATTTATATCGAAACAG-AAAGATAACATTGAAATCTGTATGTAA----------TAAGAAC-TA--TAATTAATTAGT--TGTAACAATTTCTTTATTTGACCTTTGAATGTC-CAAGAGGTCAAACGGAC--AGTTTATGCTATAAACACAACAA-AAAA--------------A------T---ATATCT--AT-ATATAGTAATCAAGGTAACGGATAA------------------------CCGTAAGGAAGTTAAAAATATCAAAG--TGTATGAATACTAGT-AAACTGCA---TAT------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-ATTG--AT-----TTATAACAATT--AT--AATCA----TGG--TTTTATAATTAAATGAAA-AGT-AATTCCTGCT-Attctggcttatatacccaacacaaaaaagcatgcaacatgaaaattacatgagaaagtatagttaagtcatatttattgtagccgtttgacatctatgttgtattttttaagaaatacacctttataaataataataaatattatagacatatttatatcgaaacagaaagataacattgaaatctgtatgtaataagaactataattaattagttgtaacaatttctttatttgacctttgaatgtccaagaggtcaaacggacagtttatgctataaacacaacaaaaaaatatatctatatatagtaatcaaggtaacggataaccgtaaggaagttaaaaatatcaaagtgtatgaatactagtaaactgcatatttatcaatattcaatattgatttataacaattataatcatggttttataattaaatgaaaagtaattcctgctatttcttctttcctcataatactgcctttttcggtaaaaaatttca
gi|9 : tactgtactagtctaagacgtcttcactagatttgtctttacattttacaagtgcaaatatagagaataacaaaacataagtcggggattttggatttagtagaatgattgaatagatttcaataaaaaaaaatcatattattttagaaggtgttactatttagtgaaaattatgattaaaaaaagagagataagTACAAGTTTTAAACTTATATTGCGCCTGTGAAA-CTCAGTACAGTATACACATTTATTCTGGCTTATATAATCAACCCA--------------ATCATAGACAAATTTTGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGAAGCTGTGTGACATCTATATTGTACTT--TA------T--AC-AAACACACTTTTATAAGTAATAATAAATAATATTACACACTTAA--ACATATTTATAATGGAACAG-AAAGAGAACATTGAAATCTGTATGTTA----------TAAGAAC-TA--TAATTAATTAGT--------------TTTATTTGACCTTTAAATGTC-CAAGATGTCAAGAAGAC--AGTTTATGGT---AGC---ACAATAGAAGTATATAT------A------T---ATATAT--AT-AAACAGTATTTAAGGTAATGAATAGGTACTACTAAAACCCGGCCAGGTTCCTTAGGTTAGTAAAAAGTATCTATGTTTATATCAATACTGGTAAAACTGCC---TAA------TT-------A-------TC-------A-------ATAGTGAAAA---------T-TAGAT-TTAG--AT-----TTATAAAGATTGGAG--AACTC----TGT--CTTTATAATTAACTGAAA-AGT-AATTCCTGCT-ACA-ATATA-TATTtttcttctttcctcataatactgcctttttcggtaaaaaatttca
blockSeqs : TAC A TT A T A A A T TTT G TA AAACTTAAA G C A TTAATTTCC C . G AAAAAAATC AT TTTATTATCTTAGAAGAC TTTA AG TGG ACATTG C ATTT A AAAGA G CG G TTAA TT A A G TTGCAT TGT A TACA A T AT ATTTTT AA AT . A CAAGAACTAGT G CG TA T CTTTA T GT ATA TACGTGGA ATA CA A GTACTACTAAAACCCGGCCAGGTT TT G TAT CAGTAA GTTTATAATGA ATTCAGTATC A A TT AATGG TT TATT GG A G A A TA A TC
blockSeqs : AA A TT . . T . . T AGT . . AAA A A . ATTTATTT . . T . T TAGAAGAA T . AG . . AAA A A C . A . . . G G . . C . . . . . . . . T T . . TA T GTTTA . . . TATACATG . . . . . G TAT . ATCAATAGTGA ATTCAATATC . A . . . . CG A . . . C A TC
blockSeqs : AC . T . . G . . T TGT . . AAA A . . CTTTCTTT . . G . A TAGAAGGT T . GA . . ACA G A T . A . . . A G . . C . . . . . . . . A T . . . T CTATT . . . TATATATA . . . . . T . . AATAATAGCGA AGTGAATG . . . . . . . A . . . A T T
blockSeqs : AT . C . . . . . . TTT . . AAA A . . ATATTTCT . . T . A TGAATAT T . A . . . . . T . T . . . G G . . C . . . . . . . . T T . . . T CTATT . . . TA . . . . . G . . ATCAACAGTGT AGTGAAAA . . . . . . . A . . . A A T
blockSeqs : AT . C . . . . . . GGT . . AAA C . . TATTTTC . . T . A T T . A . . . . T . . . G G . . C . . . . . . . . A T . . . T CTATT . . . TA . . . . . G . . ATGA AG . . . . . . . A . . . A A C
blockSeqs : CA . C . . . . . . AGT . . ATA C . . TATTTCT . . A . A T T . A . . . G . . . G A . . T . . . . . . . . C T . . . T CTACT . . . TA . . . . . G . . ATCA A . . . . . . . A . . . C A T
blockSeqs : CT . A . . . . . . TG . . AA A . . TATTTCT . . C . A T T . G . . T . . . A T . . T . . . . . . . . T T . . . T TTTTA . . . GG . . . . . G . . ATCA A . . . . . . . A . . . T A G
blockSeqs : AA . C . . . . . . GA . . AA A . . GTTTAA . . G . A T . . G . C . . . A G . . C . . . . . . . . A G . . . T CTTAA . . . TA . . . . . G . . ATCA A . . . . . . . A . . . C A T
blockSeqs : . . T . . . . . . TT . . GA A . . GGA . . . . . T . . A . . . . G . . C . . . . . . . . A T . . . T CTTTG . . . GG . . . . . G . . ATCA T . . . . . . . A . . . G A A
blockSeqs : . . . . . . . . TT . . AA A . . A . . . . . . . . T T . . . T CTTTA . . . TA . . . . . G . . ATTA A . . . . . . . A . . . C . .
blockSeqs : G . . A . . . . . . . . A . . . . T TTTT . . . TA . . . . . G . . GTTA T . . . . . . . T . . . A .
blockSeqs : . . . T . . . . . T . . . . . . . . . TA . . . . . C . . ATCA A . . . . . . . A . . . A
blockSeqs : . . . . . . . . . . . . . . . . . TA . . . . . . . . ATCA A . . . . . . . A . . .
blockSeqs : . . . . . . . . . . T . . . . . . . . ATCA A . . . . . . . . . . .
blockSeqs : . . A . . . . . . . . CAG A . . . . . . . . . . .
blockSeqs : . . . . . A A . . . . . . .
blockSeqCons : TATTTCT*** ** N* A* T*** A******* ** CTTTN ** *** A**************** T*
originalCons : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAACATGAA-T-TTTNTTTATTT--T-TTTAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
finalCons : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-ACA-T-T-GGA-A--AT-------A-A-GAAAGTAACAAAACATAAGTAGGGGAACATGAA-T-TTTTATTTCT---T-TTTAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------GTTACTAT---TT--T--G-AA------ATT-AGA-NAGAGAGAGATTAGAAAGAGAGA-------GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------ATA----------------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|27 ): ACTGGAACTGGAAAAGGACCGCTTCTTATCTTTTTGGATCAGCCCATTTATATCACTGGAACTGGAAAA
Unaligned ( gi|29 ): TTATTTTCCCATTTTTTATTTTTTAAAAATAACAAAAAAAATGTTAACAAAGAAATACTGTTTAACCT
Unaligned ( gi|32 ): CAACCACAGGTGTCATAGTAGGGTCGCCCTAAAAAAAACTTGTTTTCCA
Alignments
lowQualScore : 1 11111 2222222 111111111 44444444444444444444444444444444 1111111 111111 1111 11111111 11111111111 11 11111 11111111111111111111 222222222222222222222222 111 11111111111111111111111111111111 33333333333333333 11
lowQualScore : 4 1 888888 3 7 3 3 4 3 88888 3 3 55 7 6666666 2 0 44 4 4 99 1 777 55 88 666666666 77 66666666666666666666666666666666 7777 4444444 111111 5 3333 1 0 99999999 5 77 1 9999 55 4 1 2 777777 444 1 6666 2 2 44 999999 44 33 2 1 33333333333 2 33 11 1 00000 2 33 444 33333333333333333333 444 0 66 2 222222222222222222222222 33 4 222 666666 22222222222222222222222222222222 99999999999999999 2 4 33 55555 33 5555 66 1 2 2 2 33 3 22 0
lowQualScore : . . ...... . . . . . . ..... . . .. . ....... . . .. . . .. . ... .. .. ......... .. ................................ .... ....... ...... . .... . . ........ . .. . .... .. . . . ...... ... . .... . . .. ...... .. .. . . ........... . .. .. . ..... . .. ... .................... ... . .. . ........................ .. . ... ...... ................................ ................. . . .. ..... .. .... .. . . . . .. . .. .
lowQualScore : 0 0 333333 6 3 6 6 5 6 55555 6 6 00 3 4444444 2 5 00 0 0 55 6 000 55 99 000000000 44 55555555555555555555555555555555 8888 4444444 555555 0 6666 4 8 22222222 7 99 0 4444 55 0 4 1 777777 777 5 1111 9 9 66 666666 66 99 9 0 88888888888 7 77 00 5 00000 7 44 444 00000000000000000000 444 4 55 4 666666666666666666666666 44 1 444 888888 99999999999999999999999999999999 99999999999999999 4 7 22 99999 44 3333 99 2 4 4 5 77 5 33 8
consensus : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-A-CA-T-T-G-GA-A--ATA-AA------GAAAGTAACAAAACATAAGTAGGGGAACATGAATT-TT-T--ATTTCTTTT---TAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------G------TTACTAT---TT--T--G-AA------ATTA-GANA-GAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
Reference ( family-624 ) : ATTGTAACAGTCT-ANGACCGTCTTC-CC-A-G-ATTCGTCCTTACA-T-T-T-A-CA-T-T-G-GA-A--ATA-A-------GAAAGTAACAAAACATAAGTAGGGGAACATGAATT-TT-T--ATTTCTTTT---TAGTAGAATGATTA--AATGN-ATTTCAATAA---------GTA-TATTT-------T-----------------G------TTACTAT---TT--T--G-AA------ATTA-GANA-GAGAGAGATTAGAAAGAGAG---A----GATAGAGACTTAGCT--CGTTGACTAGTAAGGTGNAAGTT----ACCTTTA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACCTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACACTTTTATAAGTAATAATAAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATGTNA----------TAAGAAC-TA--TAATTAATTAGT--TATAGTAATTTCTTTATTTGACCTTTNAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-NTATT-TACTCTACA
gi|1 : TATATAGCCAACATAGACAAA------ATATCACAGAAAAAGCATGCAACATAAGA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAGTAATAATAAATAATATTATACAACTAT--ACATATGTATAATGGAACAGAAAAAAGAACATTGAAATCAGTATGTAG----------TAAGAAC-TA--TAAGGATTTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATATCAAT-AAAAAGTTTTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTATAATGCATCAAAG--TGAAT-AATACTAGTAAAACTGCATATTAA------TT-------A-------TC-------G-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTA-AATTTACAGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTA
gi|10 : TCC-CC-A-G-ATTCGTACTTACA-T-T-TTA-CA-TGC-G-AA-A--ATATA-------GAAAGTAACACA-CATATGTAGAGGAATATACTTT-TT-T--ATTTCATTT---CAGTAGAACGATCATTGATATTGTTT---TAG---------GT-----TG-------T-----------------G------TTACTA----TT--T--A-AA------ATTA-ttctatatgtaattcttttaataacaatttataacatcccgtgactcattatattaaatcgtaaattgtgtaataaaagttttattgaaactggaagaggacctctttttatctttttaggaacagtttattaataccgtgccaccagaacaaaacgttggtgcagaatcaatggatcccagccactggtgagttatctctcagagtagacaagatggaggtcgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggtgtcatagtagggtcgccctaaaagaaacttgttttccat
gi|10 : taGATACATAGCT--CGTTGACTTGCAAGATGAAAGTT----ACGTTTC--TTGTTTGTGAAA------------------ATTTATTATGGCTTACATAGCCAACATAGACGAA------GTATAACAGAAACATTATGCAACATGAAA---TTTAAATCAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGATATATGTAGTGTATAT--TT------TAAAAAAAATACACTTTTATAAGTGACAATAAATACTAATATACACTTAA--ATATAGTTATATTGAAACCG-AAAGATAGCA-TG-----TACATGTAA-----------AAGAAC-TG--TAATTAATTAGT--Tcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgg------T------A------T---ATATAT--AT-AAACAATATTTAAAGAAATCAATTA------------------------CCTTCA-GT--TAAAATtgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagttaaaataaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|10 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttaTTAAAATAAACTGATA-AAT-CATTCTTGCT-ACA-CT-TT-T-CTCaaactgataaatcattcttgctacacttttctcatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tatccccagattcgtacttacattttacatgcgaaaatatagaaagtaacacacatatgtagaggaatatacttttttatttcatttcagtagaacgatcattgatattgttttaggttgtgttactatttaaaattacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcgggatacatagctcgttgacttgcaagatgaaagttacgtttcttgtttgtgaaaatttattatggcttacatagccaacatagacgaagtataacagaaacattatgcaacatgaaatttaaatcagaaagtatagttaaactaattcattgtagctgtttgatatatgtagtgtatattttaaaaaaaatacacttttataagtgacaataaatactaatatacacttaaatatagttatattgaaaccgaaagatagcatgtacatgtaaaagaactgtaattaattagtttgtcttgtctcatgaacactgtatgctttatatatatatataaacaatatttaaagaaatcaattaccttcagTTGTAACAGTTT-AAGACCGCCTTC-C------ACTCGTCCTTACA-TAT-T-A-CA-T-TTG-AA-A--ATA-A-------GAAAGTACCAAAGCATATGTTTGTAAACGTGGATT-TT-T--ATTTTCTTT---TAGCAGAA-GATTT--AATGG-ATTTCAATAA---------GTT-TATTT-------T-----------------G------GTAATAT---TT--T--A-GA------Aatctttaattttaaatgtttcaaaattgacaaaa
gi|11 : tA--GCGTCTGTGAAA-C-------AAAATACTCATTTATTCTGGCTTATGTAGCCAACATAGACAGATTGCATGTATCACAGAAAAAGCA----ACATAAAA---TTTACCTGAGA----ATGTATAATT-TAACTA-ATTCATTGTAGCCGTCTGACATCTTTATT----TT------------------ACA----TTTATGAGTTATAATAAATAATATCACACACTTAA--ATATAGTTATAATGAAACTT-AAAGgatgttgttatattaaagtatttcttgaaaagagcgtctgtgaaacaaaatactcatttattctggcttatgtagccaacatagacagattgcatgtatcacagaaaaagcaacataaaatttacctgagaatgtataatttaactaattcattgtagccgtctgacatctttattttacatttatgagttataataaataatatcacacacttaaatatagttataatgaaacttaaag
gi|12 : tttgtaacagtttaagaccgccttccactcgtccttacatattacatttgaaaataagaaagtaccaaagcatatgtttgtaaacgtggatttttattttcttttagcagaagatttaatggatttcaataagtttattttggtaatattttagaagatgttgttatattaaagtatttcttgaaaagATTGTAACAGTCT-AAGGCCGTCTTCACT-A-G-ATTCGTTCTTACA-T-T-TTA-CAAG-T-G-AA-A--ATA-AA------GAAAGTAACAAAACATACGAAGGGGAATTTGGACT-TT-T--GTTTAATTT---TAGTAGAATGAATA--AATG--ATTTCAATAA---------GTA-TATTT-------TTTATTATCTTAGAAGACG------TTACTATTTATT--T--A-AAACATTGATTT-GAAA-AAGAGAGATTAGAAATAGAAGGCA----GATAGCGACTACGCTCGCGTTCACTAGTAAGGACGAAGTT----ACCTTTG--GCGTCCGC-CAA-CTAAGAACACGACATATATTTATTCTGGTTTATATACTCAACAT---TACG------GCAGCACAGAGGGGACATGCGAAA--AAATGTTTTATCT
gi|13 : ATACGATACACTTAA--ACATATCTATAATGAAGCAG-A----TAACATTAAAATATGTATATTA--------------AA---A--TAACTAATTACT--T-TAGTAATTTCTTTATTTGACCTTTAAATGTC-CAAGATGTTAAGTGGAC--AGTCTATGCT---AGCATAACAATAGAAG------T------A------T---ATATCT--AT-ACATAGTATTTTAGGAAA------------------------------------------TAAAATGTATCAAAG--TGTATGAATACTAGTGAAACTGCA---TAA------AT-------A-------TG-------A-------AT-------A---------G-TAAATATTAT--ATAATGGTT-TAAAGATTGCAG--AACTC----TATGGTTTTATAATTAACTGAAA-AGT-AATTACAGCT-ACA-ATATT-cggtcccaaggcataat
gi|14 : CATTGAAATCTGTATGTAACAAGAACTAGTAAGAAC-TA--GAATTAATTA-T--TATAGTAATTTATTTATTTTATGTTTAAATGTC-CAAGCTGTCAAGTGGATGTAGTTTATGCT---AGTACAACAATAGAAG------T------A------T---ATATAA--AT-AAATAGTATTTA-GGTCATGGATAA------------------------CCATAAGGTAGTTAAATGTATCAAAG--TGTATGAATACTAGTAAAACTGCA---TAA------GT-------A-------TC-------A-------Actgaccatatacaattacgttccagcaggaaaaataacatttatgttactcattgtat
gi|14 : gcg-------AT-------A---------T-TCAAT-TCAA--AT-----TTATAAAGATCGCAG--AACTT----TAT--TTTTATAATTAACTG-AA-ACT-CATTCCTGTT-ACA-agtgtatgaatactagtaaaactgcataagtatcaaagtgtatattcaattcaaatttataaagatcgcagaactttatttttataattaactgaaactcattcctgttacaa
gi|15 : gcgcattgaaatctgtatgtaacaagaactagtaagaactagaattaattattatagtaatttatttattttatgtttaaatgtccaagctgtcaagtggatgtagtttatgctagtacaacaatagaagtatatataaataaatagtatttaggtcatggataaccataaggtagttaaatgtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgtatgaatactagtaaaactgcataagtatcaaagtgt----GAGAGAGGTTTAGCT--CGTTGACTAGTAAGGTGAAAGTT----ACATTTA--ACAGTTGTGAAA-CTAAGTGCAGAATACAC----ATTCTGGCTTATATAGCCAACATAGACAAA------GTATCACAGACAAA-TATGCAACATGAAA---AT------AAA----TAGTAT--TT-AAGGTA-ATa
gi|15 : --AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAAGTAGTAAAATGTGTAAGAT--TATATTAATACTAGTAAAACTACA---TAACAGTAATT-------A-------TC-------A-------AT-------AGTGAATG--T-TCAAT-TTAG--AT-----TTATAAAGATTGCAT--AACTC----TAA--TTTTATAATTAATTGAAA-AGT-CATTCCTGCT-ACA-AT-TC-TACgaataaccttaaagtagtaaaatgtgtaagattatattaatactagtaaaactacataacagtaattatcaatagtgaatgttcaatttagatttataaagattgcataactctaattttataattaattgaaaagtcattcctgctacaattctaccaaattaacggttctcagaca
gi|16 : gagagaggtttagctcgttgactagtaaggtgaaagttacatttaacagttgtgaaactaagtgcagaatacacattctggcttatatagccaacatagacaaagtatcacagacaaatatgcaacatgaaaTGTATGTTA----------TAAGAAC-AA--TTATTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T-------------------------------TTGCATCTAAGGTAATGAATAA------------------------CCTTAAGGTAATAAAATATATCAAAG--TGTATGAACACTGGGAAAATTGCA---TAA------TTGTTTATAA-------TG-------A-------AT-------A---------T-TCAAT-TTAT--AT-----TTATAAAGATTGCAG--AACTC----TAT--TGTTATAATTAACTAAAAGAGT-CATTCCTGCT-ACA-ATATT-caaattaacggttctcagaca
gi|17 : gtaAAGAACGTACGTAGTCAATTGGT--TATAGTTATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---TGCACAACAACAGAAG------G------G------T---ATGTCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------TCTTAAGGTAGCAAAATATATTAAAG--TGTATGAATACTGGAAAACCTGCA---TAA------TT-------A-------TC-------A-------AT-------AG--------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AAC-----------TTTTATAATAAAC-AAAA-AATACATTCTTGCT-ACA-atcattatgtatctcagaattcacagctttact
gi|18 : catatacttagctgggttcttgaTGTT-CAAGATGTGAAATGGAC--AGCTTATGCT---AGCAGAACACCATAAG------TACGTGGA------T---ATTTCT--AT-AAATAGTATTTAACGTAATGAATGG------------------------CTTTAAG---------TGTATCTAAG--TGTATGAATACTAGTAAAACTGAA---AAA------------------------C-------AG------GT-------T---------T-TTAGT-TTGGTTAT-----TCATATATATTGC
gi|19 : AGAGACTCGGGT--CGTTGACTAGCAAGGTGAAAGTT----ACTGTTA--GCGTCTGAGAAA-CTAAGTACAGAAAACACATTTATTCTGGCTTATATAGCCAACATAGACAAG------GTATCACAGAAAAAGCAAACAACATGAAA---TTTACCAGAGA----AAGTACAATT-AAACTA-ATTCATTcatcaagttatttacagcaatggcataacacatcataagtggataaatgaaaagaaatatccgcagttttt
gi|2 : ttagttatagagatcgaactatccaaccgagtaagTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAACATAAAA---TTTACCAGCGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCCATTTAATATCTATATTGTACTT--TT------T--AAGAAGCACAGTTTTATAAGTAATAATAAATAATATTATACACCTAGATACATATGTATAATGGAATAG-AAAGAGAACATTGAAATCAGTATGTAA----------TAAGAAC-TC--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGCGGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------T---ATATGTCAATAAAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACTAGTAAAACTGCATATTAA------TT-------A-------TC-------A-------GT-------ATTCAGTATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTC----TGT--TTTTAT-ATTTACCGAAA-AAT-CATTCCTGCT-ACA-CTTTTCTATTCTAcaaagacgtatttag
gi|20 : TAGTATTTAAGGTAATGAGTAA------------------------CCTTAAGATAG-AAAATGT----------------------GTAAAACTGCA---TAA------TT-------A-------TCAATAGTGA-------AT-------A---------T-TTAAT-GTAG--AT-----TTATAAAGATTATAGTTAA--------GA--TTTTATCATTAATTGAAA-AGT-AATTCCTGCTAACATACATG-TACTttctatacgtaattcatttaataactatttgtaacatcccatgactcgttatattaaatcgtaaattgtgtaataaaagttttaatgaaactgaaagaggacctctttttatctttttaggaacagtccattaataccgttccaccagaacaaaacgttggtgcagaatcaatggataccagccactggtgagttatctctcagagatggaggttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaccacaggcgtcatagtagggtcgccctaaaaaaacttgttttccat
gi|21 : GTAACAATCT-ACGACCGTTTTC-TTTA-G-AGTCGTCCCTACA-T-T-TTA-CA-TGT-G-GAGA--ATA-A-------GAAAATTACAAAACATAAGTAGGGGAATATGAGTT-TT-TA-ATTTCCTTT---TAGTAGAATGATTA--AATAT-ATTTGGATA-----------T--TATCT-------TAGAAGAA----------G------TTACTA----TT--T--A-AA------ATTA-gaagcattttttttttacaatggcataatgtagttattttatt
gi|22 : GTAACAGTCT-ATGAACGTCTTC-CTTA-G-ATTCGTCCTTAAAAT-T-T-A-CA-T-G-G-GG-ATAATA-AA------GAAAGTGACTAAACATAAGTACAGGAACATGA-TT-TT-T--ATTTATTTT---TAGTCGAATGATTA--AATGG-ATTTCGATAA---------GTA-TACTT-------T-----------------G------ATATTAT---TT--TTGG-AG------ATtga
gi|23 : ATAAACAAA------TTATTACAGAAACAGCATACAACATGAAA---TTT----GAAATACAAAATATAGTT-AAACTA-ATCCAGTGTAGCCGTTTGACATCTATATTGCAgt
gi|24 : CATTATAGCCGTTTG-----TATATTGTACTT--TTATTTTTT--AAGTAATACACTTTTATAAGTAATAATAAATAATATAATACACTAAA--ACACATTTATATTGAAACGG-GAAAAgatgatatcataaagtgttttactcagtagataaactataacaagggtcccacttattat
gi|25 : AGAAC-GA--TAATCAATTAGT--TATAGTAATTTCTTTATTTGGC-TTTTAATGTC-CAAGATGTCGAATGGAC--ACTTTATGCT---AGCACAACAATAGAt
gi|26 : tctgaattaaaacAACTGCA---TAA------TT-------A------------------------AT-------T---------TATCAATAGTGA--AT-----TTATAAAGATTACAG----TTG----TGG--TTTTATAATTAACTG--A-AGT-TAT
gi|28 : TGTAACAGTCT-ATGACTGTCTTC-CC-A-ATATTCGTCCTTACA-T-TAT-A-CA-G-A-G-GG-A--GAG-A-------GAGAGT
gi|3 : gATTGTAACAGTCT-CAGACCGTCTTC-CC-A-G-TTTTGTCCTTACA-T-T-T-A-CA-T-T-G-GA-A--ATA-A---------AAGTAACACACGAAAAGTAGAGGAATATAAAATATT-T--CTTTCTTTTCTTTTGTGGAATAATCA--AATGT-ATTTCAATGA---------GTA-CATTT-------T-----------------G------TTACTAT---TT--C--G-AA------ATCA-GAAA-GAGAAAGATCAGAAAGAGAG---A----GACAGAGACTTAGCT--CTGTGGCAAGTAAGGTGTAAGTT----ACCTTTA--GCTTCTGTGAAA-CTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAATACAAA------GCATTACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAGCCA-ATTCATTGTAGCTGTTTGACATCTATATTGTAATT--TT------T--AAGAAACACACTATTACAAATA-TAATTAATAATATTATACACTTAA--ACATATTTATAATGAAACAG-AAAGAGAACATTGAAATCTGTATATCA----------TAAGAAC-AA--TACTTAATTGGT--TATAGTAATTTCTTTATTTGACCTATTAATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------G------G------T---ATATCT--AT-AAATAATATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGCAAAATATATCAAAG--TGTATGAATACTGGAAAACCTGCA---TAA------TT-------A-------TT-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTCTATTTAT--TTTTATAATTAACTGAAA-AGT-CATTCCTGCT-ACA-TTATT-TGCTTTACActa
gi|30 : ACTTCTAGAAGTAATACTAAATAATATTATACACCCAA--ACATA-TTATAATGAAACAG-AAaccatactgaaataatttcaa
gi|31 : TGGAC--AATTTACGCT---AGCACAACAATATATG------T------A------T---ATACTT--AT-AAATAGTA---AAAGTA
gi|4 : TAACAGTCT-CTGACCGTTTCC-CC-A-G-TTTCGTCCTTACA-T-T-T-A-CA-T-T-G-GA-A--ATA-AA------GGAAGTAACAAACAAAAAGTAGGGGAATATGAAAT-ATAT--ATTTCTTTT---TAGGGGAATAATTA--AATGT-ATTTCAATGA---------GTA-TAATT-------T-----------------G------TTACTAT---TT--T--G-AA------ATTA-GACA-GAGAAAGATCAGAAAGAGAG---AAAGAGATAGAGACTTAGTT--TGGTGACGAGTAAGGTGTAAGTG----ACCTTTA--GCATCTGTGAAA-GTAAGTGCAGAATACACATTTATTCTGGCTTATATAGCCAACCAAGACAAA------GTATCACAGAAAAAGCATGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGTAGCTGTTTGACATCTATATTGTACTT--TT------T--AAGAAACACATTTTTATAAATAATAATAAATAATATTATACACTTAA--ACATGTTTATAACGAAACAA-AAAGAGAACATTGAAATCAAAATGTTA----------TAAGAAC-AG--TAATTAATTGGT--TATAGTAATTGCTGTATTTGACCTACTTATGTC-CAAGATGTCAAGTGGAC--AGTTTATGCT---AGCACAACAATAGAAG------T------A------T---ATATCT--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CCTTAAGGTAGTAAAATATATCAAAG--TGTATGAATATTCGAAAAATTGTA---TAA------TT-------G-------TT-------A-------AT-------A---------A-TGAAT----G----------TATAATGATTGCAG--AACTC----AAT--TTTTATAATTAGCT-AAA-AGT-TATTACTGCT-ACA-CTAT----CTCTAC
gi|5 : ttCT-GTAACAGTCTTC-TC-AAG-ATTCGTCCTTACA-T-T-T-TTCA-T-T-TTGA-A--ATA-AACTTAAAGGAAATAACAAAACAAAAGTAGGGGAACATGAATT-TT-T--ATTTCTTTT---TAGTAGAATTATTA--AATGA-ATCAAAATAA---------GTA-TATTT-------T-----------------GAATATGTTAATAT---TT-----A-AA------GTTCCGATTTGAAAGAGATT-GACAGATAG---A----GA----GACTTCGCT--CATTGACTAGTAAGGTGGAAGTT----ACCTTCA--GCGTCTGTGAAA-CTAAGTGCAGAATACACATTTATTATGGCCTATATAGCCAACATAGACAAA------GTAACACAGAAAAAGCATGCAATATGAAA---TTTACCTTAGA----AAGTATAGTCAAAACTA-ATTCATTGTATCCGTTTTACATCTATATTGTACTT--TT------T--AAGAA--ACACTTTTATAAGTAATAATAAATAGTGTTTTACACTTAA--ACATGTTTATAATGAAACAG-AAAGGGAACATTGAAATCTGTAT-TAA----------TAAGAAC-TA--TAATTAATTAGT--CATAGTAATTTCTTT-TTTTACTTTTAAATGTCTCAAGACGTCAAGTGAAC---------------AGCACAACAATAGAAA------T------ATACATGT---ATATCA--AT-AAATAGTATTTAAGGTAATGAATAA------------------------CTTTAAGGAAGTAAAATGTATCAAAT--TGTATGAATACTAGTAAAACGGCA---TAA------TT-------AATAATAGCG-------A-------AT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACTT----TAT--TTTTATAATTAAATGAAA-AGT-CATTCCTGCT-ACA-GTtatattacatctcattgtatttccaggcat
gi|6 : TATATAGCCAACATAAATAAA------GTATTATAGAAAAAGCATGCAACATATAA---TTTACCTGTGA----AAGTATAGTT-AAACTT-ATTCATTGTAGCCGTTTAACATCTATAATGTACTT--TT------T--AAGAAACACACTTTTATAAGTATTAATAAATAATATTATACACCTAT--ACATATGTATAATGGAACAA-AAAGAGAACATTGAAATCAGTATGTAA----------TAGGAAC-TA--TAAGGAATTAGTTATATAGTAATTTC----TTTGAT-------TGTC-CAAGATGTCAAGTGGAC--AGTTTTTGCT---AGCACAACAATAGAAG------T------A------TATAATATCA--AT-AAAAAGTATTTGAGGTAAAGAATAA------------------------TCTTAAGGTAGTAAAATGCATCAAAG--TGTAT-AATACAAATTAAACTGCATATTAA------TT-------A-------TC-------A-------AT-------ATTCAATATCT-TCAAT-TTAG--AT-----TTATAAAGATTGCAG--AACAC----TGT--TTTTAT-ATTTACAGTAA-AAT-CATTCCTGCT-ACA-CTATTCTATTCTA
gi|7 : TTGTAGCTGTCTTACG-CCGTCTTC-CC-AAG-ATTCGTTCTTATAGT-T-T-G-CG-GGT-G-GA-G--ATA-AA------GAAAGTAACAAAACATAAGAAGGGGAACATGAGTT-TT-T--ATTTCTTTT---TATTAGAATGTATA--AATAC-ATTTCAATAA---------GTA-TATTT-------T-----------------G------ATATTAT---TT--TA-G-AA------ATTA-ttctattctatacgttattcatttaataactatttataacatcccgtgactcgttatattaaatcgtaaattgtgtaataaaagttttattgaaactggaaatggacctctttttatctttttaggatcagtccattaataccgtgccaccagagcaaaacattggtgcagaaacaatggatcccagccactggtgagttatctctcaggggagacaagatggaagccga
gi|7 : TACGGTGTAAGTT----ACCTTTA--GCGTCTGTAAAAACTAAGTACAGAATACACATTTATTCTGGTTTATATAGCCAACATAGACAAA------GTATCACAGAAAAAGCATGCAGCATGAAA---TTTACATGAGA----AAGTATAGTT-TAACTT-ATTCATTGTAGCCGTCTGACA-----ATTGTACTTATTT------T--ATGAAACACACTTTTATAAGTAATAATAAATAATATTATA-ACATAA--GCATATTTATTATGAAACAA-AAAGATAACATTGAAATATGTATGTTA----------GAAGAAC-TA--TGATTAATTAAT--TATTGTAATTTCTTTATTTGTCCTTAAAATGTC-TATGATGTCAAGTAGAC--AGTTTATGCT---AGCACAACAATAAAAG------T------A------A---CTATCG--AT-AAATAGTATTTTAGGTAATGCATAA------------------------CCTTAAGGTAGTACAATGTATCAAAG--CGTATGAATACTAGTAAAACTGCA---TAA------TT-------A-------TC-------AACAGTGTAT-------A---------T-TCAAT-TTAG--AT-----TTATAAAGATTGCAA--AACTC----TATCGTTTTATAATTAACTG-AA-AGT-CATTCCTACT-ACA-ATAcggtgtaagttacctttagcgtctgtaaaaactaagtacagaatacacatttattctggtttatatagccaacatagacaaagtatcacagaaaaagcatgcagcatgaaatttacatgagaaagtatagtttaacttattcattgtagccgtctgacaattgtacttattttatgaaacacacttttataagtaataataaataatattataacataagcatatttattatgaaacaaaaagataacattgaaatatgtatgttagaagaactatgattaattaattattgtaatttctttatttgtccttaaaatgtctatgatgtcaagtagacagtttatgctagcacaacaataaaagtaactatcgataaatagtattttaggtaatgcataaccttaaggtagtacaatgtatcaaagcgtatgaatactagtaaaactgcataattatcaacagtgtatattcaatttagatttataaagattgcaaaactctatcgttttataattaactgaaagtcattcctactacaata
gi|8 : ttgtagctgtcttacgccgtcttcccaagattcgttcttatagtttgcgggtggagataaagaaagtaacaaaacataagaaggggaacatgagtttttatttctttttattagaatgtataaatacatttcaataagtatattttgatattattttagaaatACTGTACTAGTCT-AAGAC-GTCTTCACT-A-G-ATTTGTCTTTACA-T-T-TTA-CAAG-T-G-CA-A--ATATA-------GAGAATAACAAAACATAAGTCGGGGA--------T-TT-TGGA------TT---TAGTAGAATGATTG--AATAG-ATTTCAATAAAAAAAAATCATATTATTTTAGAAGGT-----------------G------TTACTAT---TTAGT--GAAA------ATTA-T----------GATTAAAAAAAGAG---A----GATA-AGATTTA
gi|8 : tATTTATTCTGGCTTATATACCCAACACA---------------------AAAAAGCATGCAACATGAAA---ATTACATGAGA----AAGTATAGTT-AAGTCATATTTATTGTAGCCGTTTGACATCTATGTTGTATTT--TT------T--AAGAAATACACCTTTATAAATAATAATAAATA---TTATA------G--ACATATTTATATCGAAACAG-AAAGATAACATTGAAATCTGTATGTAA----------TAAGAAC-TA--TAATTAATTAGT--TGTAACAATTTCTTTATTTGACCTTTGAATGTC-CAAGAGGTCAAACGGAC--AGTTTATGCTATAAACACAACAA-AAAA--------------A------T---ATATCT--AT-ATATAGTAATCAAGGTAACGGATAA------------------------CCGTAAGGAAGTTAAAAATATCAAAG--TGTATGAATACTAGT-AAACTGCA---TAT------TT-------A-------TC-------A-------AT-------A---------T-TCAAT-ATTG--AT-----TTATAACAATT--AT--AATCA----TGG--TTTTATAATTAAATGAAA-AGT-AATTCCTGCT-Attctggcttatatacccaacacaaaaaagcatgcaacatgaaaattacatgagaaagtatagttaagtcatatttattgtagccgtttgacatctatgttgtattttttaagaaatacacctttataaataataataaatattatagacatatttatatcgaaacagaaagataacattgaaatctgtatgtaataagaactataattaattagttgtaacaatttctttatttgacctttgaatgtccaagaggtcaaacggacagtttatgctataaacacaacaaaaaaatatatctatatatagtaatcaaggtaacggataaccgtaaggaagttaaaaatatcaaagtgtatgaatactagtaaactgcatatttatcaatattcaatattgatttataacaattataatcatggttttataattaaatgaaaagtaattcctgctatttcttctttcctcataatactgcctttttcggtaaaaaatttca
gi|9 : tactgtactagtctaagacgtcttcactagatttgtctttacattttacaagtgcaaatatagagaataacaaaacataagtcggggattttggatttagtagaatgattgaatagatttcaataaaaaaaaatcatattattttagaaggtgttactatttagtgaaaattatgattaaaaaaagagagataagTACAAGTTTTAAACTTATATTGCGCCTGTGAAA-CTCAGTACAGTATACACATTTATTCTGGCTTATATAATCAACCCA--------------ATCATAGACAAATTTTGCAACATGAAA---TTTACTTGAGA----AAGTATAGTT-AAACTA-ATTCATTGAAGCTGTGTGACATCTATATTGTACTT--TA------T--AC-AAACACACTTTTATAAGTAATAATAAATAATATTACACACTTAA--ACATATTTATAATGGAACAG-AAAGAGAACATTGAAATCTGTATGTTA----------TAAGAAC-TA--TAATTAATTAGT--------------TTTATTTGACCTTTAAATGTC-CAAGATGTCAAGAAGAC--AGTTTATGGT---AGC---ACAATAGAAGTATATAT------A------T---ATATAT--AT-AAACAGTATTTAAGGTAATGAATAGGTACTACTAAAACCCGGCCAGGTTCCTTAGGTTAGTAAAAAGTATCTATGTTTATATCAATACTGGTAAAACTGCC---TAA------TT-------A-------TC-------A-------ATAGTGAAAA---------T-TAGAT-TTAG--AT-----TTATAAAGATTGGAG--AACTC----TGT--CTTTATAATTAACTGAAA-AGT-AATTCCTGCT-ACA-ATATA-TATTtttcttctttcctcataatactgcctttttcggtaaaaaatttca
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|27 ): ACTGGAACTGGAAAAGGACCGCTTCTTATCTTTTTGGATCAGCCCATTTATATCACTGGAACTGGAAAA
Unaligned ( gi|29 ): TTATTTTCCCATTTTTTATTTTTTAAAAATAACAAAAAAAATGTTAACAAAGAAATACTGTTTAACCT
Unaligned ( gi|32 ): CAACCACAGGTGTCATAGTAGGGTCGCCCTAAAAAAAACTTGTTTTCCA