lowQualScore : 2222222222222 11111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 33333333 11 22 1 1 44444 11 1 1 1 4 4 222 1 55 11 88888888888888888888888888888888888888 11 1 222 2222222222222 1111 22 1 77777 44444444444444444444444444444444444444444444444444444444444444444444444 11111 11 1 222222222222 4 11 1111111 1 222222222 11 22 555555555555555555 1 3 1
lowQualScore : 6 99 8 5 3 1 0 22222222 2 4 3 1 0 7 0 33 66 6 6 11 6 6 7 5 33333 6 22 5 6 7 6 7 0 0 111 5 55 22 6 99999999999999999999999999999999999999 6 22 7 999 0000000000000 8888 11 6 6 7 6 66666 6 6 99999999999999999999999999999999999999999999999999999999999999999999999 66666 88 0 888888888888 0 11 2 4444444 3 0 6 2 2 777777777 6 11 77 666666666666666666 4 2 4 4 2 4 55 3 2 99 4 8888 999999 1
lowQualScore : . .. . . . . . ........ . . . . . . . .. .. . . .. . . . . ..... . .. . . . . . . . ... . .. .. . ...................................... . .. . ... ............. .... .. . . . . ..... . . ....................................................................... ..... .. . ............ . .. . ....... . . . . . ......... . .. .. .................. . . . . . . .. . . .. . .... ...... .
lowQualScore : 0 88 0 6 2 6 6 77777777 7 0 7 8 1 3 7 44 11 0 0 00 0 0 0 0 00000 0 00 0 0 0 0 0 0 0 000 0 00 00 0 00000000000000000000000000000000000000 0 00 0 000 0000000000000 0000 00 0 0 0 0 00000 0 0 00000000000000000000000000000000000000000000000000000000000000000000000 77777 33 7 888888888888 0 00 0 8888888 5 5 0 2 5 333333333 7 00 55 111111111111111111 0 6 0 5 0 0 55 9 6 55 0 3333 666666 0
consensus : TACTCACGTATT-AGA-CGCATTCGTGTATATCGCGCATCCNTGTTTTAAGACCTTA-----AGAGCT-AAGAAAAAAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCTGATTCTACTGTGGCGACATGTTGAAAGGAATACCTGACTGGATATGTTAAACAGAATTTGATTGGTCAAAACAAAAACAGTAGACTGATACTCACTAAAAAATATTGAATTTGTTCCCAAGATTTAATCAAGTTATATTTTGTTATGATTATTATTA-TTTTTTATTTTTGACAATTTTTAAGATATTTTCTTACGAAAATATGTGGTGACCCTAAAAA--AGTCTTGACTGTTAATCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATATAAAATATATTT-AGAAACACAA-TTACATATAAGACGTATAAACGAAAGAAATATGTGAAGATAAATA-------------AACAGTGTTCCATTTATTCCGCATGTGTTAATACACTTCCACCTTTTCATAAAAGAACAGTTTATGTTATTTT----GCTACCTCC-GATCACGA--------TTCAAATAAAAATGGTAGTTAATANTAATCTACTT------TCTCGATTTGTTTGACATGCT-TTA--CTGCATATATAATG---TATAN----GGACTGAA-TTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTGTAANCGA--GCTCNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTA-CAAAAC-TTTTCTGAATCGATAAATCACCTTGGAAAATTACAT-A-----AAAAAAA-ATGAAA-TCTTCTGTACTTAT-GTATAT--CGCGCATCCCTTCTCGAAGATCTTAAAAGTT--G-GG--GAAAAA------ACGCGCCTAATACGTGAGA
Reference ( gi|1 ) : TATTCACGTATA-AGA-CGCATTCGTGTATATCACGCATCCATGTTTTAAGACC--A-----AGAACT-AAGAAAAAAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCATCCCGATTCGGCTGTGGTGATATGTTGAAAGGTATACCTGACTCGATATGTTAAACAGAATTTGATTGGTCCGAA-AAAAACAGTAGACTGGTACTTGCTCAAAAATACTGAATATGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGAATA-TATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTGAGGAAAATATGTGGTTACCCTAAAAAAGAGTCTTGACCATTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATTGATTTGATTTGATAAATATAAACTAC-TACAAACTACACAAATAAAAGATATATGTGTGAATAAATACATTTATGAACATAACAGTACTGCATTTATTCCGCATTCGTCAATACACTTTCACCTTTACGTAA---ACCAGTCTGTGTTATTTTAAATGTTATTTCC-GATCATGA--------TTCAAATAA-----GCAGTAAACACTA-TCTAATT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATG---TATAA----GGACTGAAATTTGAATAAAACATTCTCCACTAGGTAAATCATCACCTATAATTGA--GCTCACATGAAAAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATT--TTTGAAAAATTACAT-------ACAAAAA-ATTAAA-TCTTTTGTACTT-T-GTATAT--CGCGCATCCCTTCTCAAATATCTTAAAAGTT--G-GA--AAAAAA------ATGCGCCTAATACGTGAGA
gi|2 : TACTCACGTATT-AGA-TACATTTGTGTATATCGCGCATCCATGTTTTAAGACC--A-----AAAACT-AAGAATA----TACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCTGATTCTACTGTGGCGACATGTTGAAAGGAATACCTGACTGGATATGTTAAACAGAATTTGATTGGTCAAAACAAAAACAGTAGACTGATACTCACTAAAAAATATTGAATTTGTTCCCAAGATTTAATCAAGTTATATTTTGTTATGATTATTATTA-TTTTTTATTTTTGACAATTTTTAAGATATTTTCTTACGAAAATATGTGGTGACCCTAAAAA--AGTCTTGACTGTTAATCCT
gi|9 : cgtttcTACTCACATATT-AGA-CGCATTCGTGTATATTGTGCATCCATGTTTTAGGACC--A-----AGAACT-AAGAAAATAAATACAATTCTCCTAT-ATATGTGTTTA--GAGCGCATCATAATTTTGAAATCTCAT
gi|8 : ttcTACTCACGTATT-AGA-CGCATTCGTCTATATCGCGCATCCATGTTTTAAGACC--A-----AGTACT-AAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAACCCATCCTAATTTTGAAATCTCAT
gi|18 : ttcTACTCACGTATT-AGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAt
gi|6 : ttttTCTCGTATACAGAGCCCTCTCGTATATAGTACGCTTTCCCATTTTAAGACCTTAATTTCAGAG---AGGAAAAAAA----AATTCCCCTGC-ATCTGTGTATATTACGCACATCAGTATTTTGAAAT
gi|17 : ctcgtatatagcgcccGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTA-----AAAGTT-GGGGAAAAA---ACG---CGCCTA--ATACGTGAGTA--GAtctgaaaatatggactgaatttgaataaaaggttctttggttggtaaatcatgatctgtaagcgaactcccataaagatattatcctgaaattaacacttgaatatacctgtatctccgaatcaatcga
gi|16 : attaaaaaaatgaaatcttctGTACTTATGTATATCGTGCATCCCTTCTCGAAGATCTTA-----AAAGTT-GGGAAAAAAAaa
gi|15 : attaaaaaaaatgaaatcttctGTACTTATGTATATCTCGCATCCCTTCTCGAATATCTTA-----AAAGTTGGGGAAAAAAAACGCA-----CCTA--ATATGTGAGTA--GAcgcgcctaatacatgagtagaaacg
gi|10 : acataaaaaaatgaaatcttctGTATTTATGTATATCGCGCATCCCTTCTCGAAGATCTTA-----AAAGTT-GAGAGAAAAAACGCG-----CCTA--ACGTGTGAGTA--GAagc
gi|12 : tacattaaaaaaaaaaaaaaaaaatcttctATTCATGTATATCGCGCATCCATGTTTTAAGACC--A-----AGAACT-AAGAAAATAGATATAATTCTCCTGTAATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTaacgg
gi|13 : T-AAAAAAAA-AATG-AATTCTTCTGT-ACTTATGTATA--TCGCGCATC
gi|7 : caATTATATAAAATATATTT-AGAAACACAA-TTACATATAAGACGTATAAACGAAAGAAATATGTGAAGATAAATA-------------AACAGTGTTCCATTTATTCCGCATGTGTTAATACACTTCCACCTTTTCATAAAAGAACAGTTTATGTTATTTT--------CCTCT--ATCATGT--------TTCAActttctcgaagatctttaaagttgggaaaaaaaacgcgcctaatacatgagtagaaac
gi|3 : GCTATTTTCAGAACATGACGGTCTCTTTCCAATAAAAATGGTAATTAATAGTAATCTACTTGGTATGTCTCGATTTGTTTAACA-ATTATTAATTTGTATAT-TAATG---AATAT----GGACAGAA-TTTGAATAAAAGGTTCTCCACTAGGTAAATTATCATCTGTAATCTACTGCCCAAAT--AGGAATTGTCCTGAAATTTACATCTGAACATACCG
gi|4 : a-GATCACAA--------TGGAAATAA-----G-AGTT--TACTA-TTTANNN------NNNNNNNNNNNNNNNNNNNNN-NNN--NNNNNNNNNNNNNNNNNTATGACCATGGACTGAA-TTTGAATAAAAGGTTTTCTGCTAGGTAAGTCATCATCTATAAATGG--CCTCTCATAAAGAAATTATCCTGAAAATAACATCTGAACATTCCGGTCT-CCAAAACATGTTGT--ATCT-CAAATTACCTTGGA------------------AAAAA-GTGACA-TC--TTGTACTT-TAGTATAA--TGTGAATCTCT-----AAGATCTAAAAAGTT--G-GA--GAAAAAAAAAGTATGCACCATCTACATGAGAacctcgatcaaaagcattgaagtcttctatacttgtatataatgtacatcccttcaaaaagttcttaaaagttggaaaaaatatgcccaccatgtgtgagtggaaac
gi|5 : T------TTTCGATTTATTTGACATGCT-TTA--CTGCATATATAATG---TACAA----GGACTGAA-TTCGAATAAAACATTCTCCACTATGTAAATCATCACCTATAATCAA--GCTTACATGAAGAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATC--TTTGAAAAATTACATAAAAAAAAAAAAAA-ATGAAA-TCTTCTGTACTTAT-GTATAT--CGCGCATCCCTTCTCAAAGATCTTAAAAGTT--G-GGGTGAAAAA------ACGTGCCTAATACGTAAGaaaaac
gi|6 : ATAT----GGACTGAA-TTTGAATAAAAGGTTCTTTGGTTGGTAAATCATGATCTGTAAGCGA--ACTCCCATAAAGATATTATCCTGAAATTAACACTTGAATATACC--TGTA---------TCTCCGAATCAATtagaaac
gi|11 : ctcgtatatagcgccctctcgtatacagagccctctcgtatatagtacgctttcccattttaagaccttaatttcagagaggaaaaaaaaattcccctgcatctgtgtatattacgcacatcagtattttgaaattctgaaaTTACATTAAA---AAAAAAA-ATGAAA-TCTTCTGTACGTAT-GTATAT--CGCGCATCCCTTCTCGAAGATCTTAAATGTT--G-GG--GAAAAA------ACGCGTCTAATACACGAGcga
gi|15 : ACAT-------A-AAAAA-ATGAAA-TCTTCTGTACTTAT-GTATAT--CTCGCATCCCTTCTCGAATATCTTAAAAGTTGGG-GA--AAAAAA------ACGCACCTAATATGTGAGtagaaatgg
gi|14 : ACATTA-----AAAAAAA-ATGAAA-TCTTCTGTACTTAT-GTATAT--CGCGCATCCCTTCTGGAAGATCTTAAAAGTT--G-G----AAAAA------ACGCGCCTAATATGTGAGtagaagc
gi|16 : T-------AAAAAAA-ATGAAA-TCTTCTGTACTTAT-GTATAT--CGTGCATCCCTTCTCGAAGATCTTAAAAGTT--G-GG--AAAAAA------ACGCGCCTAATACATGAGtagaaacg
gi|3 : atCAAAAGCATTGAAGTCTTCTATACTT---GTATATAATGTACATCCCTTCAAAAAGTTCTTAAAAGTT--G-GA--AAAAAT------ATGCCCACCATGTGTGAGtagaaacg
gi|17 : agctattttcagaacatgacggtctctttccaataaaaatggtaattaatagtaatctacttggtatgtctcgatttgtttaacaattattaatttgtatattaatgaatatggacagaatttgaataaaaggttctccactaggtaaattatcatctgtaatctactgcccaaataggaattgtcctgaaatttacatctgaacataccgacctcgatAAAAA-ATGAAA-TCTTCTGTACTTAT-GTATAT--CGCGCATCCTTTCTCGAAGATCTTAAAAGTT--G-GG--GAAAAA------ACGCGCCTAATACGTGAGtggaaac
gi|13 : attaAAAAA-ATGAAT-TCTTCTGTACTTAT-GTATAT--CGCGCATCCTTTCTCGAAGATCTTTAAAGTTG-G-GA--AAAAAA------ACGCGCCTAATACATGAGtagaaa
gi|10 : cataaaaAAAAA-A--AAA-TCTTCTGTATTTAT-GTATAT--CGCGCATCCCTTCTCGAAGATCTTAAAAGTT--GAGA--GAAAAA------ACGCGCCTAACGTGTGAGtagaaac
gi|8 : tacattaaaaaaaaaA------ATGCGTCTAATACGTGAGtagaaacgg
gi|18 : ttctaA------ATGCGTCTAATACGTGAGcgtctatatcgcgcatccatgttttaagaccaagtactaagaaaataaatacaattctcctatatatgtgtatagaacccatcctaattttgaaatctcatt
Alignments
lowQualScore : 1111111111111
lowQualScore : 55555555 1 1 1 2 22 66666666666666666666666666666666666666666666666666666666666666666 2 2 1 1111111111111 222 666666666 333333333 1 222222 1 11 1111 3333333 33 2222222
lowQualScore : 6 6 1 00000000 3 2 3 6 99 2 3 4 2 3 5 3 4 4 5 0 3 2 2 77 55555555555555555555555555555555555555555555555555555555555555555 4 4 77 0 2 0 5 3 4 4 0000000000000 2 2 4 111 3 555555555 6 0 444444444 1 6 2 888888 0 0 5 0 0 33 5 2 7777 1 8 1 8 8 1 0000000 3 0 2 33 55 0 88 5555555 3 3 88 55 55
lowQualScore : . . . ........ . . . . .. . . . . . . . . . . . . . . .. ................................................................. . . .. . . . . . . . ............. . . . ... . ......... . . ......... . . . ...... . . . . . .. . . .... . . . . . . ....... . . . .. .. . .. ....... . . .. .. ..
lowQualScore : 7 7 0 55555555 3 2 2 7 22 2 0 0 5 0 0 0 0 0 5 0 0 5 5 55 00000000000000000000000000000000000000000000000000000000000000000 0 0 00 0 5 0 5 0 0 0 0000000000000 5 5 0 000 0 000000000 7 7 333333333 0 0 0 888888 8 8 8 8 0 88 8 5 0000 0 0 0 2 0 0 5555555 5 8 5 55 77 7 00 8888888 6 6 66 00 55
consensus : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC--A-----AGAACTAAGAAAATAAATACAATTCTCCTATA-TATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT-GCAGTTAATANT-ATCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTAT----ATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAAT--CTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
Reference ( family-4970 ) : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCNTGTTTTAAGACCTTA-----AGAGCTAAGAAAAAAAATACAATTCTCCTATA-TATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCTGATTCTACTGTGGCGACATGTTGAAAGGAATACCTGACTGGATATGTTAAACAGAATTTGATTGGTCAAAACAAAAACAGTAGACTGATACTCACTAAAAAATATTGAATTTGTTCCCAAGATTTAATCAAGTTATATTTTGTTATGATTATTATTA-TTTTTTATTTTTGACAATTTTTAAGATATTTTCTTACGAAAATATGTGGTGACCCTAAAAA--AGTCTTGACTGTTAATCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATATAAAATATATTT-AGAAACAC-AATTACATATAAGACGTATAAACGAAAGAAATATGTGAAGATAAATA-------------AACAGTGTTCCATTTATTCCGCATGTGTTAATACACTTCCACCTTTTCATAAAAGAACAGTTTATGTTATTT----TGCTACCTCCGATCACGATTCAAATAAAAATGGTAGTTAATANTAATCTACTT------TCTCGATTTGTTTGACATGCT-TTA--CTGCATATATAATGTAT----ANGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTGTAANCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTA-CAAAA-CTTTTCTGAATCGATAAATCACCTTGGAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
gi|1 : TATTCACGTAT-AAGA-CGCATTCGTGTATATCACGCATCCATGTTTTAAGACC--A-----AGAACTAAGAAAAAAAATACAATTCTCCTATA-TATGTGTATA--GAGCGCATCATAATTTTGAAATCTCATCCCGATTCGGCTGTGGTGATATGTTGAAAGGTATACCTGACTCGATATGTTAAACAGAATTTGATTGGTCCGAA-AAAAACAGTAGACTGGTACTTGCTCAAAAATACTGAATATGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGAATA-TATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTGAGGAAAATATGTGGTTACCCTAAAAAAGAGTCTTGACCATTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATTGATTTGATTTGATAAATATAAACTAC-TACAAACTACACAAATAAAAGATATATGTGTGAATAAATACATTTATGAACATAACAGTACTGCATTTATTCCGCATTCGTCAATACACTTTCACCTTTACGTAA---ACCAGTCTGTGTTATTTTAAATGTTATTTCCGATCATGATTCAAATAA-----GCAGTAAACACT-ATCTAATT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTAT----AAGGACTGAAATTTGAATAAAACATTCTCCACTAGGTAAATCATCACCTATAATTGAGCT-CACATGAAAAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAAT--TTTTGAAAAATTACAT-------ACA-AAAAATTAAATCTTTTGTACTT-TGTATATCGCGCATCCCTTCTCAAATATCTTAAAAGTTG-GA--A--AAAAAATGCGCCTA--ATACGTGAGA
gi|10 : ATTAAAA------AAAA-AAAAAAAAAATCTTCTGTATTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTGAGA--G--AAAAAACGCGCCTA--ACGTGTGAG
gi|11 : tacTTACATTAA---AAAA-AAAAATGAAATCTTCTGTACGTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAATGTTG-GG--G--AAAAAACGCGTCTA--ATACACGAGtagaaacgg
gi|12 : ATTCATGTATATCGCGCATCCATGTTTTAAGACC--A-----AGAACTAAGAAAATAGATATAATTCTCCTGTAATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTtagaaatgg
gi|13 : CAT------AAAAAAAAAATGAATTCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTTAAAGTTG-GGA-A--AAAAAACGCGCCTA--ATACATGAG
gi|14 : ACATT-----AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTGGAAGATCTTAAAAGTT---G--G--AAAAAACGCGCCTA--ATATGTGAGtagaaac
gi|15 : ACAT------AAAA---AAATGAAATCTTCTGTACTTATGTATATCTCGCATCCCTTCTCGAATATCTTAAAAGTTG-GG--GAAAAAAAACGCACCTA--ATATGTGAGtagaaacg
gi|16 : AT------TAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGTGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--A--AAAAAACGCGCCTA--ATACATGAGtagaagc
gi|17 : AA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGtagaaacg
gi|18 : attTACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAtagaaa
gi|2 : ttttTACTCACGTAT-TAGA-TACATTTGTGTATATCGCGCATCCATGTTTTAAGACC--A-----AAAACTAAGAATA----TACAATTCTCCTATA-TATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCTGATTCTACTGTGGCGACATGTTGAAAGGAATACCTGACTGGATATGTTAAACAGAATTTGATTGGTCAAAACAAAAACAGTAGACTGATACTCACTAAAAAATATTGAATTTGTTCCCAAGATTTAATCAAGTTATATTTTGTTATGATTATTATTA-TTTTTTATTTTTGACAATTTTTAAGATATTTTCTTACGAAAATATGTGGTGACCCTAAAAA--AGTCTTGACTGTTAATCCT
gi|3 : cgtttcTTCCAATAAAAATGGTAATTAATAGTAATCTACTTGGTATGTCTCGATTTGTTTAACA-ATTATTAATTTGTATAT-TAATGAAT----ATGGACAG-AATTTGAATAAAAGGTTCTCCACTAGGTAAATTATCATCTGTAATCTA-CTGCCCAAATAGGAATTGTCCTGAAATTTACATCTGAACATACCG
gi|3 : agctattttcagaacatgacggtctctAT------CAAA-AGCATTGAAGTCTTCTATACTTGTATATAATGTACATCCCTTCAAAAAGTTCTTAAAAGTT---G--G--AAAAAATATGCCCACCATGTGTGAGacctcgatcaaaagcattgaagtcttctatacttgtatataatgtacatcccttcaaaaagttcttaaaagttggaaaaaatatgcccaccatgtgtgagtggaaac
gi|4 : agctattttcagaacatgacggtctctttccaataaaaatggtaattaatagtaatctacttggtatgtctcgatttgtttaacaattattaatttgtatattaatgaatatggacagaatttgaataaaaggttctccactaggtaaattatcatctgtaatctactgcccaaataggaattgtcctgaaatttacatctgaacataccgacctcgGATCACAATGGAAATAAGAGT-----TTACTATTTANNNNNNN------NNNNNNNNNNNNNNNNNNNNN-NNN--NNNNNNNNNNNNN-TATGACCATGGACTG-AATTTGAATAAAAGGTTTTCTGCTAGGTAAGTCATCATCTATAAATGGCCT-CTCATAAAGAAATTATCCTGAAAATAACATCTGAACATTCCGGTCTC-CAAAA-CATGT-TGTATCT-CAAATTACCTTGG------------------AA-AAAAGTGACATCT--TGTACTTTAGTATAATGTGAATCTCT-----AAGATCTAAAAAGTTG-GA--G--AAAAAAtggaaac
gi|5 : T------TTTCGATTTATTTGACATGCT-TTA--CTGCATATATAATGTAC----AAGGACTG-AATTCGAATAAAACATTCTCCACTATGTAAATCATCACCTATAATCAAGCT-TACATGAAGAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAAT--CTTTGAAAAATTACATAAAAAAAAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCAAAGATCTTAAAAGTTG-GGGTG--AAAAAACGTGCCTA--ATACGTAAGaaagtatgcaccatctacatgagaaaaaac
gi|6 : CTCTCGTATACAGAGCCCTCTCGTATATAGTACGCTTTCCCATTTTAAGACCTTAATTTCAGAG--AGGAAAAAAA----AATTCCCCTGCA-TCTGTGTATATTACGCACATCAGTATTTTGAAA-----TTCTGAtagaaac
gi|6 : ctcgtatatagcgccAT----ATGGACTG-AATTTGAATAAAAGGTTCTTTGGTTGGTAAATCATGATCTGTAAGCGAACT-CCCATAAAGATATTATCCTGAAATTAACACTTGAATATACC--TGTA---------TCTCCGAATCAATaaatatggactgaatttgaataaaaggttctttggttggtaaatcatgatctgtaagcgaactcccataaagatattatcctgaaattaacacttgaatatacctgtatctccgaatcaatcga
gi|7 : ctcgtatatagcgccctctcgtatacagagccctctcgtatatagtacgctttcccattttaagaccttaatttcagagaggaaaaaaaaattcccctgcatctgtgtatattacgcacatcagtattttgaaattctgaaaATTATATAAAATATATTT-AGAAACAC-AATTACATATAAGACGTATAAACGAAAGAAATATGTGAAGATAAATA-------------AACAGTGTTCCATTTATTCCGCATGTGTTAATACACTTCCACCTTTTCATAAAAGAACAGTTTATGTTATTT----T----CCTCT-ATCATGTTTCAAcga
gi|8 : TACTCACGTAT-TAGA-CGCATTCGTCTATATCGCGCATCCATGTTTTAAGACC--A-----AGTACTAAGAAAATAAATACAATTCTCCTATA-TATGTGTATA--GAACCCATCCTAATTTTGAAATCTCATT
gi|9 : ttcTACTCACATAT-TAGA-CGCATTCGTGTATATTGTGCATCCATGTTTTAGGACC--A-----AGAACTAAGAAAATAAATACAATTCTCCTATA-TATGTGTTTA--GAGCGCATCATAATTTTGAAATCTCAT
Alignments
lowQualScore : 11111111 1 1 1 11 1 1 1 5555555555555 222 33333333 4444444444 1 222222 1 11 1 2222222
lowQualScore : 6 6 66666666 3 1 6 99 1 1 1 2 5 1 1 1 5 5 1 1 1 88 1 1 22 5 1 5 5 1 1 1 0000000000000 1 1 1 111 1 66666666 6 0 9999999999 3 1 3 1 888888 5 0 33 3 66 1 8 1 8 8 1 5 33 2 0 7 8888888 3 3 88 55 55
lowQualScore : . . ........ . . . .. . . . . . . . . . . . . . .. . . .. . . . . . . . ............. . . . ... . ........ . . .......... . . . . ...... . . .. . .. . . . . . . . .. . . . ....... . . .. .. ..
lowQualScore : 7 7 88888888 5 7 7 22 0 0 0 5 0 0 0 0 5 5 0 0 0 00 0 0 00 0 0 5 5 0 0 0 0000000000000 0 0 0 000 0 00000000 7 7 3333333333 7 0 3 0 888888 8 0 88 2 00 4 0 0 2 0 0 0 22 5 2 3 9999999 6 6 66 00 55
consensus : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-ANTTAACANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
Reference ( family-4970 ) : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-AGTTAATANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
gi|1 : TATTCACGTAT-AAGA-CGCATTCGTGTATATCACGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAAAAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCATCCCGATTCGGCTGTGGTGATATGTTGAAAGGTATACCTGACTCGATATGTTAAACAGAATTTGATTGGTCCGAA-AAAAACAGTAGACTGGTACTTGCTCAAAAATACTGAATATGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGAATA-TATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTGAGGAAAATATGTGGTTACCCTAAAAAAGAGTCTTGACCATTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATTGATTTGATTTGATAAATATAAACTAC-TACAAACTACACAAATAAAAGATATATGTGTGAATAAATACATTTATGAACATAACAGTACTGCATTTATTCCGCATTCGTCAATACACTTTCACCTTTACGTAA---ACCAGTCTGTGTTATTTTAAATGTTATTTCCGATCATGATTCAAATAA------G-C-AGTAAACACTA-TCTAATT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATAAGGACTGAAATTTGAATAAAACATTCTCCACTAGGTAAATCATCACCTATAATTGAGCT-CACATGAAAAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATTTTTGAAAAATTACAT-------ACA-AAAAATTAAATCTTTTGTACTT-TGTATATCGCGCATCCCTTCTCAAATATCTTAAAAGTTG-GA--A--AAAAAATGCGCCTA--ATACGTGAGA
gi|10 : ATTAAAA------AAAA-AAAAAAAAAATCTTCTGTATTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTGAGA--G--AAAAAACGCGCCTA--ACGTGTGAG
gi|11 : tacTTACATTAA---AAAA-AAAAATGAAATCTTCTGTACGTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAATGTTG-GG--G--AAAAAACGCGTCTA--ATACACGAGtagaaacgg
gi|12 : ATTCATGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAGATATAATTCTCCTGTAATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTtagaaatgg
gi|13 : CAT------AAAAAAAAAATGAATTCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTTAAAGTTG-GGA-A--AAAAAACGCGCCTA--ATACATGAG
gi|14 : ACATT-----AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTGGAAGATCTTAAAAGTT---G--G--AAAAAACGCGCCTA--ATATGTGAGtagaaac
gi|15 : ACAT------AAAA---AAATGAAATCTTCTGTACTTATGTATATCTCGCATCCCTTCTCGAATATCTTAAAAGTTG-GG--GAAAAAAAACGCACCTA--ATATGTGAGtagaaacg
gi|16 : AT------TAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGTGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--A--AAAAAACGCGCCTA--ATACATGAGtagaagc
gi|17 : AA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGtagaaacg
gi|18 : attTACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAtagaaa
gi|2 : ttttTACTCACGTAT-TAGA-TACATTTGTGTATATCGCGCATCCATGTTTTAAGACC---A----AAAACTAAGAA--TA--TACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCTGATTCTACTGTGGCGACATGTTGAAAGGAATACCTGACTGGATATGTTAAACAGAATTTGATTGGTCAAAACAAAAACAGTAGACTGATACTCACTAAAAAATATTGAATTTGTTCCCAAGATTTAATCAAGTTATATTTTGTTATGATTATTATTA-TTTTTTATTTTTGACAATTTTTAAGATATTTTCTTACGAAAATATGTGGTGACCCTAAAAA--AGTCTTGACTGTTAATCCT
gi|3 : cgtttcTTCCAATAAAAAT--GGT-AATTAATAGTAATCTACTTGGTATGTCTCGATTTGTTTAACA-ATTATTAATTTGTATAT-TAATGAATATGGACAG-AATTTGAATAAAAGGTTCTCCACTAGGTAAATTATCATCTGTAATCTA-CTGCCCAAATAGGAATTGTCCTGAAATTTACATCTGAACATACCG
gi|3 : agctattttcagaacatgacggtctctAT------CAAA-AGCATTGAAGTCTTCTATACTTGTATATAATGTACATCCCTTCAAAAAGTTCTTAAAAGTT---G--G--AAAAAATATGCCCACCATGTGTGAGacctcgatcaaaagcattgaagtcttctatacttgtatataatgtacatcccttcaaaaagttcttaaaagttggaaaaaatatgcccaccatgtgtgagtggaaac
gi|4 : agctattttcagaacatgacggtctctttccaataaaaatggtaattaatagtaatctacttggtatgtctcgatttgtttaacaattattaatttgtatattaatgaatatggacagaatttgaataaaaggttctccactaggtaaattatcatctgtaatctactgcccaaataggaattgtcctgaaatttacatctgaacataccgacctcgGATCACAATGGAAATAAGAGTTTA-CTATTTANNNNNN-NNNNNNN------NNNNNNNNNNNNNNNNNNNNN-NNN--NNNNNNNTATGAC---CATGGACTG-AATTTGAATAAAAGGTTTTCTGCTAGGTAAGTCATCATCTATAAATGGCCT-CTCATAAAGAAATTATCCTGAAAATAACATCTGAACATTCCGGTCTC-CAAAACATGTTGT----------ATCTC----AAATTACCTT-----GGAA-AAAAGTGACATCTT--GTACTTTAGTATAATGTGAATCTCT-----AAGATCTAAAAAGTTG-GA--G--AAAAAAtggaaac
gi|5 : T------TTTCGATTTATTTGACATGCT-TTA--CTGCATATATAATGTACAAGGACTG-AATTCGAATAAAACATTCTCCACTATGTAAATCATCACCTATAATCAAGCT-TACATGAAGAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACATAAAAAAAAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCAAAGATCTTAAAAGTTG-GGGTG--AAAAAACGTGCCTA--ATACGTAAGaaagtatgcaccatctacatgagaaaaaac
gi|6 : CTCTCGTATACAGAGCCCTCTCGTATATAGTACGCTTTCCCATTTTAAGACCTTAATTTCAGAG--AGGAAAA-AAA---AATTCCCCTGC-ATCTGTGTATATTACGCACATCAGTATTTTGAAATtagaaac
gi|6 : ctcgtatatagcgccATATGGACTG-AATTTGAATAAAAGGTTCTTTGGTTGGTAAATCATGATCTGTAAGCGAACT-CCCATAAAGATATTATCCTGAAATTAACACTTGAATATACC--TGTA---------TCTCCGAATCAATtctgaaaatatggactgaatttgaataaaaggttctttggttggtaaatcatgatctgtaagcgaactcccataaagatattatcctgaaattaacacttgaatatacctgtatctccgaatcaatcga
gi|7 : ctcgtatatagcgccctctcgtatacagagccctctcgtatatagtacgctttcccattttaagaccttaatttcagagaggaaaaaaaaattcccctgcatctgtgtatattacgcacatcagtattttgaaattctgaaaATTATATAAAATATATTT-AGAAACACAA-TTACATATAAGACGTATAAACGAAAGAAATATGTGAAGATAAATA-------------AACAGTGTTCCATTTATTCCGCATGTGTTAATACACTTCCACCTTTTCATAAAAGAACAGTTTATGTTATTTT--------CCTCT-ATCATGTTTCAAcga
gi|8 : TACTCACGTAT-TAGA-CGCATTCGTCTATATCGCGCATCCATGTTTTAAGACC---A----AGTACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAACCCATCCTAATTTTGAAATCTCATT
gi|9 : ttcTACTCACATAT-TAGA-CGCATTCGTGTATATTGTGCATCCATGTTTTAGGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTTTA--GAGCGCATCATAATTTTGAAATCTCAT
Alignments
lowQualScore : 11111111 1 1 1 11 1 1 1 5555555555555 222 33333333 4444444444 1 222222 1 11 1 2222222
lowQualScore : 6 6 66666666 3 1 6 99 1 1 1 2 5 1 1 1 5 5 1 1 1 88 1 1 22 5 1 5 5 1 1 1 0000000000000 1 1 1 111 1 66666666 6 0 9999999999 1 1 3 1 888888 5 0 33 3 66 1 8 1 8 8 1 5 33 2 0 7 8888888 3 3 88 55 55
lowQualScore : . . ........ . . . .. . . . . . . . . . . . . . .. . . .. . . . . . . . ............. . . . ... . ........ . . .......... . . . . ...... . . .. . .. . . . . . . . .. . . . ....... . . .. .. ..
lowQualScore : 7 7 88888888 5 7 7 22 0 0 0 5 0 0 0 0 5 5 0 0 0 00 0 0 00 0 0 5 5 0 0 0 0000000000000 0 0 0 000 0 00000000 7 7 3333333333 0 0 3 0 888888 8 0 88 2 00 4 0 0 2 0 0 0 22 5 2 3 9999999 6 6 66 00 55
consensus : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-ANTTAACANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
Reference ( family-4970 ) : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-ANTTAACANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
gi|1 : TATTCACGTAT-AAGA-CGCATTCGTGTATATCACGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAAAAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCATCCCGATTCGGCTGTGGTGATATGTTGAAAGGTATACCTGACTCGATATGTTAAACAGAATTTGATTGGTCCGAA-AAAAACAGTAGACTGGTACTTGCTCAAAAATACTGAATATGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGAATA-TATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTGAGGAAAATATGTGGTTACCCTAAAAAAGAGTCTTGACCATTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATTGATTTGATTTGATAAATATAAACTAC-TACAAACTACACAAATAAAAGATATATGTGTGAATAAATACATTTATGAACATAACAGTACTGCATTTATTCCGCATTCGTCAATACACTTTCACCTTTACGTAA---ACCAGTCTGTGTTATTTTAAATGTTATTTCCGATCATGATTCAAATAA------G-C-AGTAAACACTA-TCTAATT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATAAGGACTGAAATTTGAATAAAACATTCTCCACTAGGTAAATCATCACCTATAATTGAGCT-CACATGAAAAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATTTTTGAAAAATTACAT-------ACA-AAAAATTAAATCTTTTGTACTT-TGTATATCGCGCATCCCTTCTCAAATATCTTAAAAGTTG-GA--A--AAAAAATGCGCCTA--ATACGTGAGA
gi|10 : ATTAAAA------AAAA-AAAAAAAAAATCTTCTGTATTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTGAGA--G--AAAAAACGCGCCTA--ACGTGTGAG
gi|11 : tacTTACATTAA---AAAA-AAAAATGAAATCTTCTGTACGTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAATGTTG-GG--G--AAAAAACGCGTCTA--ATACACGAGtagaaacgg
gi|12 : ATTCATGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAGATATAATTCTCCTGTAATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTtagaaatgg
gi|13 : CAT------AAAAAAAAAATGAATTCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTTAAAGTTG-GGA-A--AAAAAACGCGCCTA--ATACATGAG
gi|14 : ACATT-----AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTGGAAGATCTTAAAAGTT---G--G--AAAAAACGCGCCTA--ATATGTGAGtagaaac
gi|15 : ACAT------AAAA---AAATGAAATCTTCTGTACTTATGTATATCTCGCATCCCTTCTCGAATATCTTAAAAGTTG-GG--GAAAAAAAACGCACCTA--ATATGTGAGtagaaacg
gi|16 : AT------TAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGTGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--A--AAAAAACGCGCCTA--ATACATGAGtagaagc
gi|17 : AA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGtagaaacg
gi|18 : attTACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAtagaaa
gi|2 : ttttTACTCACGTAT-TAGA-TACATTTGTGTATATCGCGCATCCATGTTTTAAGACC---A----AAAACTAAGAA--TA--TACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCTGATTCTACTGTGGCGACATGTTGAAAGGAATACCTGACTGGATATGTTAAACAGAATTTGATTGGTCAAAACAAAAACAGTAGACTGATACTCACTAAAAAATATTGAATTTGTTCCCAAGATTTAATCAAGTTATATTTTGTTATGATTATTATTA-TTTTTTATTTTTGACAATTTTTAAGATATTTTCTTACGAAAATATGTGGTGACCCTAAAAA--AGTCTTGACTGTTAATCCT
gi|3 : cgtttcTTCCAATAAAAAT--GGT-AATTAATAGTAATCTACTTGGTATGTCTCGATTTGTTTAACA-ATTATTAATTTGTATAT-TAATGAATATGGACAG-AATTTGAATAAAAGGTTCTCCACTAGGTAAATTATCATCTGTAATCTA-CTGCCCAAATAGGAATTGTCCTGAAATTTACATCTGAACATACCG
gi|3 : agctattttcagaacatgacggtctctAT------CAAA-AGCATTGAAGTCTTCTATACTTGTATATAATGTACATCCCTTCAAAAAGTTCTTAAAAGTT---G--G--AAAAAATATGCCCACCATGTGTGAGacctcgatcaaaagcattgaagtcttctatacttgtatataatgtacatcccttcaaaaagttcttaaaagttggaaaaaatatgcccaccatgtgtgagtggaaac
gi|4 : agctattttcagaacatgacggtctctttccaataaaaatggtaattaatagtaatctacttggtatgtctcgatttgtttaacaattattaatttgtatattaatgaatatggacagaatttgaataaaaggttctccactaggtaaattatcatctgtaatctactgcccaaataggaattgtcctgaaatttacatctgaacataccgacctcgGATCACAATGGAAATAAGAGTTTA-CTATTTANNNNNN-NNNNNNN------NNNNNNNNNNNNNNNNNNNNN-NNN--NNNNNNNTATGAC---CATGGACTG-AATTTGAATAAAAGGTTTTCTGCTAGGTAAGTCATCATCTATAAATGGCCT-CTCATAAAGAAATTATCCTGAAAATAACATCTGAACATTCCGGTCTC-CAAAACATGTTGT----------ATCTC----AAATTACCTT-----GGAA-AAAAGTGACATCTT--GTACTTTAGTATAATGTGAATCTCT-----AAGATCTAAAAAGTTG-GA--G--AAAAAAtggaaac
gi|5 : T------TTTCGATTTATTTGACATGCT-TTA--CTGCATATATAATGTACAAGGACTG-AATTCGAATAAAACATTCTCCACTATGTAAATCATCACCTATAATCAAGCT-TACATGAAGAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACATAAAAAAAAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCAAAGATCTTAAAAGTTG-GGGTG--AAAAAACGTGCCTA--ATACGTAAGaaagtatgcaccatctacatgagaaaaaac
gi|6 : CTCTCGTATACAGAGCCCTCTCGTATATAGTACGCTTTCCCATTTTAAGACCTTAATTTCAGAG--AGGAAAA-AAA---AATTCCCCTGC-ATCTGTGTATATTACGCACATCAGTATTTTGAAATtagaaac
gi|6 : ctcgtatatagcgccATATGGACTG-AATTTGAATAAAAGGTTCTTTGGTTGGTAAATCATGATCTGTAAGCGAACT-CCCATAAAGATATTATCCTGAAATTAACACTTGAATATACC--TGTA---------TCTCCGAATCAATtctgaaaatatggactgaatttgaataaaaggttctttggttggtaaatcatgatctgtaagcgaactcccataaagatattatcctgaaattaacacttgaatatacctgtatctccgaatcaatcga
gi|7 : ctcgtatatagcgccctctcgtatacagagccctctcgtatatagtacgctttcccattttaagaccttaatttcagagaggaaaaaaaaattcccctgcatctgtgtatattacgcacatcagtattttgaaattctgaaaATTATATAAAATATATTT-AGAAACACAA-TTACATATAAGACGTATAAACGAAAGAAATATGTGAAGATAAATA-------------AACAGTGTTCCATTTATTCCGCATGTGTTAATACACTTCCACCTTTTCATAAAAGAACAGTTTATGTTATTTT--------CCTCT-ATCATGTTTCAAcga
gi|8 : TACTCACGTAT-TAGA-CGCATTCGTCTATATCGCGCATCCATGTTTTAAGACC---A----AGTACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAACCCATCCTAATTTTGAAATCTCATT
gi|9 : ttcTACTCACATAT-TAGA-CGCATTCGTGTATATTGTGCATCCATGTTTTAGGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTTTA--GAGCGCATCATAATTTTGAAATCTCAT
blockSeqs : A G TTAATTTC T G A TT T A G A C A T T T . T C G . A A AT . G . A A A A . C G T AAG A . G GAGTTTACT A G A C GGTATG N A AT A GA T . T C G C G CA G T AAAAAAA A A GT AA CC
blockSeqs : . . A T A . . . AAATGGT T N . N . T . . A GT T . A G . T . TC G . TAAA . . A . .
blockSeqs : . . A T A . . . . . . . . A . T A . A . . . TA . . . . .
blockSeqs : . . A T A . . T . G . . C TG . . . . .
blockSeqs : . . A . . . . A . . . . .
blockSeqs : A . . . . .
blockSeqs : A . . . . .
blockSeqs : T . . . . .
blockSeqs : C . . . . .
blockSeqs : . . . .
blockSeqCons : A******
originalCons : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-ANTTAACANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
finalCons : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-ANTTAACANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACATA------AAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
Alignments
lowQualScore : 11111111 1 1 1 11 1 1 1 5555555555555 222 33333333 4444444444 1 222222 1 11 1 2222222
lowQualScore : 6 6 66666666 3 1 6 99 1 1 1 2 5 1 1 1 5 5 1 1 1 88 1 1 22 5 1 5 5 1 1 1 0000000000000 1 1 1 111 1 66666666 6 0 9999999999 1 1 3 1 888888 5 0 33 3 66 1 8 1 8 8 1 5 33 2 0 7 8888888 3 3 88 55 55
lowQualScore : . . ........ . . . .. . . . . . . . . . . . . . .. . . .. . . . . . . . ............. . . . ... . ........ . . .......... . . . . ...... . . .. . .. . . . . . . . .. . . . ....... . . .. .. ..
lowQualScore : 7 7 88888888 5 7 7 22 0 0 0 5 0 0 0 0 5 5 0 0 0 00 0 0 00 0 0 5 5 0 0 0 0000000000000 0 0 0 000 0 00000000 7 7 3333333333 0 0 3 0 888888 8 0 88 2 00 4 0 0 2 0 0 0 22 5 2 3 9999999 6 6 66 00 55
consensus : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-ANTTAACANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
Reference ( family-4970 ) : TACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCCGATTCNGCTGTGGCGACATGTTGAAAGGNATACCTGACTNGATATGTTAAACAGAATTTGATTGGTCCGAACAAAAACAGTAGACTGGTACTCGCTNAAAAATACTGAATNTGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGANTATTATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTNANGAAAATATGTGGTNACCCTAAAAAAGAGTCTTGACCGTTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATNGANTNNATTTGANAAACACAAACTACATACAAGNCGCACAAACGAAAGANATATGTGNGGATAAATACATTTATGAACATAACAGTGCTNCATTTATTCCGCATNCGTCAATACACTTCCACCTTTNCGTAAAAGANCAGTCTGTGTTATTTTAAATGTTACCTCCGATCACGATTCAAATAAGAGT--G-C-ANTTAACANTA-TCTANTT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATATGGACTG-AATTTGAATAAAAGGTTCTCCGCTAGGTAAATCATCATCTATAATCGAGCT-CNCATAAAGAAATTGTCCTGAAATTAACATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACAT------AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGA
gi|1 : TATTCACGTAT-AAGA-CGCATTCGTGTATATCACGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAAAAAATACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCATCCCGATTCGGCTGTGGTGATATGTTGAAAGGTATACCTGACTCGATATGTTAAACAGAATTTGATTGGTCCGAA-AAAAACAGTAGACTGGTACTTGCTCAAAAATACTGAATATGTTCCCAAGATTTAATCGAGTTATATTTTGTTATGAATA-TATTATTTTTTTATTTTTGACAATTTTTAAGATATTTTCTGAGGAAAATATGTGGTTACCCTAAAAAAGAGTCTTGACCATTAGTCCTAGTTCGTTAGTTTTTTTTTTTTAAAAATCTTACACATTTTTTTTAATCATAGCGAAATACCACATATTATATTGATTTGATTTGATAAATATAAACTAC-TACAAACTACACAAATAAAAGATATATGTGTGAATAAATACATTTATGAACATAACAGTACTGCATTTATTCCGCATTCGTCAATACACTTTCACCTTTACGTAA---ACCAGTCTGTGTTATTTTAAATGTTATTTCCGATCATGATTCAAATAA------G-C-AGTAAACACTA-TCTAATT------TTTCGATTTATTTGACATGTT-TTA--CTGCATATATAATGTATAAGGACTGAAATTTGAATAAAACATTCTCCACTAGGTAAATCATCACCTATAATTGAGCT-CACATGAAAAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATTTTTGAAAAATTACAT-------ACA-AAAAATTAAATCTTTTGTACTT-TGTATATCGCGCATCCCTTCTCAAATATCTTAAAAGTTG-GA--A--AAAAAATGCGCCTA--ATACGTGAGA
gi|10 : ATTAAAA------AAAA-AAAAAAAAAATCTTCTGTATTTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAAAGTTGAGA--G--AAAAAACGCGCCTA--ACGTGTGAG
gi|11 : tacTTACATTAA---AAAA-AAAAATGAAATCTTCTGTACGTATGTATATCGCGCATCCCTTCTCGAAGATCTTAAATGTTG-GG--G--AAAAAACGCGTCTA--ATACACGAGtagaaacgg
gi|12 : ATTCATGTATATCGCGCATCCATGTTTTAAGACC---A----AGAACTAAGAAAATAGATATAATTCTCCTGTAATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTtagaaatgg
gi|13 : CAT------AAAAAAAAAATGAATTCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTTAAAGTTG-GGA-A--AAAAAACGCGCCTA--ATACATGAG
gi|14 : ACATT-----AAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTGGAAGATCTTAAAAGTT---G--G--AAAAAACGCGCCTA--ATATGTGAGtagaaac
gi|15 : ACAT------AAAA---AAATGAAATCTTCTGTACTTATGTATATCTCGCATCCCTTCTCGAATATCTTAAAAGTTG-GG--GAAAAAAAACGCACCTA--ATATGTGAGtagaaacg
gi|16 : AT------TAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGTGCATCCCTTCTCGAAGATCTTAAAAGTTG-GG--A--AAAAAACGCGCCTA--ATACATGAGtagaagc
gi|17 : AA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCTTTCTCGAAGATCTTAAAAGTTG-GG--G--AAAAAACGCGCCTA--ATACGTGAGtagaaacg
gi|18 : attTACTCACGTAT-TAGA-CGCATTCGTGTATATCGCGCATCCATGTTTTAtagaaa
gi|2 : ttttTACTCACGTAT-TAGA-TACATTTGTGTATATCGCGCATCCATGTTTTAAGACC---A----AAAACTAAGAA--TA--TACAATTCTCCTAT-ATATGTGTATA--GAGCGCATCATAATTTTGAAATCTCGTTCTGATTCTACTGTGGCGACATGTTGAAAGGAATACCTGACTGGATATGTTAAACAGAATTTGATTGGTCAAAACAAAAACAGTAGACTGATACTCACTAAAAAATATTGAATTTGTTCCCAAGATTTAATCAAGTTATATTTTGTTATGATTATTATTA-TTTTTTATTTTTGACAATTTTTAAGATATTTTCTTACGAAAATATGTGGTGACCCTAAAAA--AGTCTTGACTGTTAATCCT
gi|3 : cgtttcTTCCAATAAAAAT--GGT-AATTAATAGTAATCTACTTGGTATGTCTCGATTTGTTTAACA-ATTATTAATTTGTATAT-TAATGAATATGGACAG-AATTTGAATAAAAGGTTCTCCACTAGGTAAATTATCATCTGTAATCTA-CTGCCCAAATAGGAATTGTCCTGAAATTTACATCTGAACATACCG
gi|3 : agctattttcagaacatgacggtctctAT------CAAA-AGCATTGAAGTCTTCTATACTTGTATATAATGTACATCCCTTCAAAAAGTTCTTAAAAGTT---G--G--AAAAAATATGCCCACCATGTGTGAGacctcgatcaaaagcattgaagtcttctatacttgtatataatgtacatcccttcaaaaagttcttaaaagttggaaaaaatatgcccaccatgtgtgagtggaaac
gi|4 : agctattttcagaacatgacggtctctttccaataaaaatggtaattaatagtaatctacttggtatgtctcgatttgtttaacaattattaatttgtatattaatgaatatggacagaatttgaataaaaggttctccactaggtaaattatcatctgtaatctactgcccaaataggaattgtcctgaaatttacatctgaacataccgacctcgGATCACAATGGAAATAAGAGTTTA-CTATTTANNNNNN-NNNNNNN------NNNNNNNNNNNNNNNNNNNNN-NNN--NNNNNNNTATGAC---CATGGACTG-AATTTGAATAAAAGGTTTTCTGCTAGGTAAGTCATCATCTATAAATGGCCT-CTCATAAAGAAATTATCCTGAAAATAACATCTGAACATTCCGGTCTC-CAAAACATGTTGT----------ATCTC----AAATTACCTT-----GGAA-AAAAGTGACATCTT--GTACTTTAGTATAATGTGAATCTCT-----AAGATCTAAAAAGTTG-GA--G--AAAAAAtggaaac
gi|5 : T------TTTCGATTTATTTGACATGCT-TTA--CTGCATATATAATGTACAAGGACTG-AATTCGAATAAAACATTCTCCACTATGTAAATCATCACCTATAATCAAGCT-TACATGAAGAAATTGTCCTGAAATTAATATCTGAACATACCGGTGTAGCAAAATCTTTTCTGAATCGATAAATCTTTGAAAAATTACATAAAAAAAAAA-AAAAATGAAATCTTCTGTACTTATGTATATCGCGCATCCCTTCTCAAAGATCTTAAAAGTTG-GGGTG--AAAAAACGTGCCTA--ATACGTAAGaaagtatgcaccatctacatgagaaaaaac
gi|6 : CTCTCGTATACAGAGCCCTCTCGTATATAGTACGCTTTCCCATTTTAAGACCTTAATTTCAGAG--AGGAAAA-AAA---AATTCCCCTGC-ATCTGTGTATATTACGCACATCAGTATTTTGAAATtagaaac
gi|6 : ctcgtatatagcgccATATGGACTG-AATTTGAATAAAAGGTTCTTTGGTTGGTAAATCATGATCTGTAAGCGAACT-CCCATAAAGATATTATCCTGAAATTAACACTTGAATATACC--TGTA---------TCTCCGAATCAATtctgaaaatatggactgaatttgaataaaaggttctttggttggtaaatcatgatctgtaagcgaactcccataaagatattatcctgaaattaacacttgaatatacctgtatctccgaatcaatcga
gi|7 : ctcgtatatagcgccctctcgtatacagagccctctcgtatatagtacgctttcccattttaagaccttaatttcagagaggaaaaaaaaattcccctgcatctgtgtatattacgcacatcagtattttgaaattctgaaaATTATATAAAATATATTT-AGAAACACAA-TTACATATAAGACGTATAAACGAAAGAAATATGTGAAGATAAATA-------------AACAGTGTTCCATTTATTCCGCATGTGTTAATACACTTCCACCTTTTCATAAAAGAACAGTTTATGTTATTTT--------CCTCT-ATCATGTTTCAAcga
gi|8 : TACTCACGTAT-TAGA-CGCATTCGTCTATATCGCGCATCCATGTTTTAAGACC---A----AGTACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTATA--GAACCCATCCTAATTTTGAAATCTCATT
gi|9 : ttcTACTCACATAT-TAGA-CGCATTCGTGTATATTGTGCATCCATGTTTTAGGACC---A----AGAACTAAGAAAATAAATACAATTCTCCTAT-ATATGTGTTTA--GAGCGCATCATAATTTTGAAATCTCAT