lowQualScore : 11111111111111111111111111111111111111111111111
lowQualScore : 1111111111 1 222222222222222222222222222 11 1 4444444444444 1111111111111111111 1111111 1 11111111 1 4444444444444444444 1111 1 11 11 1111 1111 1 1 88888888888888888888888888888888888888888888888 1 3 11
lowQualScore : 3 6 888 2 444 9999999999 2 1 444444444444444444444444444 99999 1 9 2 0 00 3 2 2222222222222 33 8888888888888888888 555 3 7 2 1111111 4444 3 22222222 55555 888888888 2 4 333 4444444444444444444 5555 333 333 5 8888 3 22 33 1 33 77 2 6 33 2 7 55 22 11 0 33 9999 9999 7 99 3 444 55555 9999 44444444444444444444444444444444444444444444444 2 2 2 2 33 33 6666 2 0 5 0 2 8 5 99 5555 0 666 5 555 7 4 444 44 4 1
lowQualScore : . . ... . ... .......... . . ........................... ..... . . . . .. . . ............. .. ................... ... . . . ....... .... . ........ ..... ......... . . ... ................... .... ... ... . .... . .. .. . .. .. . . .. . . .. .. .. . .. .... .... . .. . ... ..... .... ............................................... . . . . .. .. .... . . . . . . . .. .... . ... . ... . . ... .. . .
lowQualScore : 5 0 111 7 777 4444444444 7 1 777777777777777777777777777 55555 0 7 5 4 66 1 5 4444444444444 22 2222222222222222222 777 8 1 0 4444444 2222 8 99999999 00000 000000000 2 3 999 2222222222222222222 8888 999 999 1 4444 9 99 77 0 77 44 5 6 22 4 6 99 33 99 4 11 8888 6666 4 55 9 111 99999 1111 33333333333333333333333333333333333333333333333 4 4 4 5 44 44 8888 5 4 0 4 5 3 2 33 7777 5 999 6 000 1 6 777 33 6 6
consensus : GGTGTTCGAAATGTATTGTGTATTTATAAGTCGCGCAAA-ATTCA---CG---------TGAAA-TTTTACATCG--------------AT---A------TTTAT----ACGCAT-GGATAGCTCTATTCAATACCTACACA-ATGGTA---T-AT--A---T--GTATC-------------------TGCTGAAA--CACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAG----GCAGTC-------GTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGA---A---A---------GT----AGC---AA---ATAATG---AGGAAATTCGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAATCACA-CGGGTTTATGGGTTGACGAAAGTGTCTTATGAGACAGTT-C-GTAGATGGAAAAAG-AAATTTGAT---T-----CTG----GT---------------GTAG--T---------A---------------TGCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTA--AGAA--AAT-CG-TGTCTAAAATTAGAG-AAATTGTTCGAA-ATGA----TGCGCG-ATATAATGTGCGTGATATAGC---ACGCATTGCAGGCGTTTCACT---ATCTT-CAGTTCATTTCGTTCTGAGAAAAATCATGAAA
Reference ( gi|3 ) : GGTGTTCGAAATATATTGCGTATTTATAAGTTGTGCAAA-ATTCA---CA---------TGAAA-TTTGACATCA--------------AT---A------TTTAC----ATGAAT-GGATAGCTCTATTCAATATTTACAAA-ATGGTA---A-AT--A---T--GTATC-------------------TGCTGAAA--TACAGGATTCTAGAGTTATAGTCATTT-CAATA------CAG----GAAGTT-------GTT-----GACCACTGTTG---------TAAAAA-TGGTTGAGA---A---A---------GC----AGC---AA---ATAATG---AGAAAATTCTGGCTTGTAT-CAAA--GTTTGTACT--AAACT-TGG-TTGGTCTCT--AAA-AGATAT--TTTT-AATGAAATCACA-TGGGTTTATGGGTTGACCAATGTGTCTTATGAGACAGTA-T-GTAGATGGCAAAAA-AAATATGAT---T-----CTG----GT---------------G---------------A---------------TGCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTA--AGAA--AAT-TG-TGTCTAAAATTAGAG-AAATGGTTCAAA-GTGA----TGCGCA-ATATAATGTGCATGATATAGC---A-GCATTGCAGGCATTTCACT---ATCTG-CAGTTCATTTCGTTTTGAGAAAAATCATGGAACGAA
gi|6 : GGTGTTCGAAATGTATTGTGTTTTAATAAGTTGCACAAA-ATTCA---CG---------TGGAA-TTTAACATCG--------------AT---T------TTTATTCGAATGAATAGGATAGCTCTATTCAATACCTCCACA-ATGGTA---T-AT--ACA-T--GTATC-------------------TGCTGAAA--CACGTGATACCAGAGTTAAAGTCATTT-CAATA------TAG----GCAGTC-------GTT-----GACCACTGTTG---------TACAAA-TGTTTGGGG---A---A---------CC----AGT---AACACATAATG---AG--------GACTCATAT-GAAA--ATTCGTACT--AAACT-CTG-TTGTTATCT--AAA-ATATAG--ATTT-GATGAAATCACA-T-----------------AA-GTGTCTGAAGAGGCAGTT-C-GTAGATGAAAAAGA-AAAAACG-T---T-----CTT----GT---------------GT--------------ATTGTCAGCTAAAAC-TGCAG-CAAA-AT-C------ACCAAAGACAGCCA-CTTGTA--AGAA--AAT-GG-CGTCTAAAATAAGAG-AAATTG----AG-ATGA----TGTGTG-ACATAATA---GTGATATAGC---ACGCATTGCAGCCGTTTCACTTCCATCTT-TTTTCCATTTCGTTTTGA
gi|9 : agaGGTGTTCGAA-TGTATTATGTATTTATAAGTCGTGCAAC-ATTCA---C-----------------TTGGAATTA----------------------------TAC----AT------------------CAATATTTATAAACATGG-------AT--AGCTT--ATATC-----------------------GATACCTACACAAT------GGTATAAACAT------------------------GTC-------GTT-----GACCATTGTTG---------TAAAAA-TGGTTG---------------------C----AG------------ACC---AGA---------CTTATAT-CAAA--ATTCGTACT--AAACT-CGG-TTGTTCGCT--AAA-ATATATATTTTT-TTTGAAATTACA-CGAGTTTAATGGTTGACAAAAGTGTCTGATGAGAGAGTT-C-GTAGATTGTCAAAT-AAATTTGAA---T-----CGT----GT---------------GTAGAGTCAGTTAGAAA---------------TGCAA-TAAA-AT-CTGTTCAGCCAAAAACAGCAA-CATGTA--AGAA--ATT-CG-TGTCTAAAATT--AG-AAATTGTTCGAA-ATTA----TGCG---ATATAATGTGCGTGATATAGC---ACGCATTGCAGGCGTTTCACT---GTCTT-CAGTTCATTTCGTTCTGAGAAAAATTATGAAAattaattacgaaagta
gi|11 : gGGTGT-CAAAATGTATTGTGTATTTATAAGTCGCACAGA-ATTCA---CT---------TGAAA-TTTTACATCT--------------AT---A------TTTAT----ACGCAT-GGATACCTCTACTCAATACCTACACA-ATGGTA---T-ATACA---T--GCATC-------------------TGCTGGAA--CACGGGGTCCCA-AATTATAGTTACTT-CTATA------TGG----GCAATC-------GTT-----GACCACTAATG---------TAAAAA-TG--TGGGAAACA---A---------GT----GGC---AA---ATAATT---AGGAAATTCGCACTAATGT-CAAA--GTTCGTCCTAAAAACT-CGA-CTGTTCTCT--AAA-CAATAA--ATTT-GGTGAAATCACA-------------------AAAGTGTTTTATGAGGCGAAC-T-GCAAAAAAAAAAAG-AAATTTGAT---T-----TTG----GT---------------GTAGAGTCTGTTAAAAA---------------AGCAG-CAAA-AT-C------ACCATAGACAGCAA-CATGTA--A-AA--AATGTGATGTCGAAAATTAGAA-Ag
gi|22 : gaggGGTGTTTGAAGTGTATTGTGTATTTATAAGTCGCGCAAA-ATTCA---CG---------TGAAA-TTTTACATT---------------------------TTTAT----ACGCAT-GGATAGCTCTGTTCAATACCTACACA-ATGGTAT--ATAT--A---T--GTATC-------------------TGCTGAAA--CACGGGGTTCAGGAGTTATAGTCATTT-CAATA------TAG----GCAGTC-------GTC-----GACCACTGTTG---------T-AGAA-TGGGTG--------------------------------GA---ATAATG---CGGAAATTC
gi|24 : aGGTGTTAGAAATGTATTGTGTATTTATAAA--------------A---CG---------TGAAA-TCTTACATCG--------------AT---A------TATGT----ACGCAT-GGATAGCTCTGTTCAATACCTACACA-ATGGTA---T-AT--ACA-T--GTATC-------------------TGCAAAAA--CACGGGATTCCAGAGTTAAAGTCATTT-CAATA------TAG----GCAGCC-------GTC-----GACCACTATTG---------TAAAAgg
gi|20 : aggGGTGTTCGAAATGTATTGTGTATTTATAAGTCGCGCAAA-ATTCA---TG---------TGAAA-TTTTACATTG--------------ATTTAA------TTCGC----ATTGAT----TAGCT-TATTCAATA-CTACACA-CTAGTG---T-AT--A---CAAGAATT-------------------TGCTGAAA--CACGGGATTCCAGAGTTATAGTCATTT-CATTA------TTG----GCATTA-------GTT-----GATCACCGTTG---------TAA
gi|1 : ggGTGTTCGAAATGTATTGTGTATTTATAAGTT-----------CA---CG---------GGAAA-TTTTACATTG--------------AT---A------TTTAT----ACGCAT-G-ATAGCTCTGTCCAATACCTAATCA-ATGGTATA-A-AC--A---G--TTATT-------------------TGCTGAAA--TACGGGATTTTAGAGTTATAGTCATTT-CAATA------TAG----GCAGTC-------GTT-----TACCACTGTTGGGAAACGGTTGGAAA-TGGTTGGGA---A---ACGA------GT----AGC---TA---ATACTG---AGAAAATTC-GG---AAAC-CAAACTATTT---CT--AAGCT-CGA-TTGTTCTCT--AAA-ATATAT--TTT--GATGAAATTACA-CGGGTTTATGGGTTGACGAAAGTGTCTTATGAGGCAGTT-T-ATAAATGGAAAAAG-AAATTTGAT---G-----CTG----GT---------------GTAGAGTCTGTTGGAAA---------------TGAAG-CAAA-AG-CTGGTTGGCCAAAGACAGCAATTATGTA--AAAA--TAC-CG-TGACTTAATTTAGAG-AAAATGTTCGAA-ATAA----TGCAAG-AAATAATTTGCGTGAGAAAGC---ACACATTGCAGACGTGTCATT---ATCTT-CAGGTAATTTCGTTCTAAGAAAAATCATGAAActtatatcaaaattcgtactaaaatatggcttttgtctaaaa
gi|5 : cgaggaTGTTCAAAATGTATTGTACATTTATAAGTCCTGCAAATATTCAGGGCAAAATTTATGTGTAA-TTTTACATTG--------------AA---A------TTTAT----ACGCAT-GTGTAGCTCTATTCAATACCAACACA-ATGGT------------------------------------------------A--TACA-------------ATAGTTATTT-CAATA------TAG----GCAATC-------GTT-----GACCACTGTAG---------TAAAAA-TGGTTGGGA---A---ATGA------GT----AGC---AA---ACAATT---AGGAAATTCGGATTTATAT-CAAA--GTTCAAACT--AAACT-TGG-TTGTTGTCT--AAA-AGGTAT--TTTT-TATGAAATCACA-CGGGTTTATGGGTTGAAGAAAGTGTCTTATGAGACAGTT-C-AAAGATGGAAAAAT-AAATTTGAT---T-----CTG----GT---------------GC--------------AGAGTCTGTTAAAAC-TGCAG-CAAA-AT-CTGGTCCACCAAAGACAGCAA-CATGTA--AG-A--AAC-CA-TGTCTAAAATAAGAG-AAATTGTTTGAA-ATGA----TGCGCG-ATATAATTTGCATGATATAGC---ATGAATCACAGGCATTTCACT---ATCTT-CAGTTCATTTCATTCTGACAAAAATCA-GGAAgt
gi|8 : TGTTCAAAATGTATTGTGTATTTATTAGTGGCACAAA-ATTAA---AG---------TGAAA-TTTTACATCA--------------AT---A------TTTAT----ATGTAT-GGGTAGCTCTTTTTAATACTTACACA-ATGGTA---T-ATAGA---T--CTATC-------------------TGCTGAAA--CACTGGATTCCAGAGTTGTAGTTA-TT-CAATA------TAG----ACAGTC-------GTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGA---A---A---------CT----A-----AT---ACAAAG---AGGAAATTTTGACTTATAT-CAAA--GTTTGTACT--AAACT-CTG-TTG--TTCT--AAA-AGATAT--TTTT-GAT---AGCA---------------------AAAGTGTCTTATG-------------AGATGGAAAAAAGAAATTTGAT---T-----CGG----GTTTAAAGTCTGTAAAAA---------------A---------------TGCAG-TGAA-AT-CTTGTCGGCCAAAGACAGTAA-CATGTATTAGAA--AAT-TG-T------------------TGG----AA-ATGA----TACGCA-ATATAATATGCGTAATATAGC---ATGAATCACAGGCGTTTCACT---ATCTT-CAGTTCATTTTATTCTTAGAAAAATCACGGAAat
gi|13 : ggaaTGTTCGAAATATATTGTGTATTTATAAGTTGTGCAAA-ATTCA---CG---------TGAAAGTTTG-CATCG--------------AT---ACATGTATTTAT----ACGCAT-GGATAACTCTATTCAATATCTACACA-ATGGAA---T-ATGCA---T--GTATC-------------------TGCTGAAA--CACGAGATTCCAGAGTAATTGTTATTT-CAATA------TAA----GCAGTC-------GTT-----AACCA---TTT---------TAACA-----TTGGGA---A---ACGA------GT----AGC---AA---ATAATG---AGGAAATTAGGACTTGTAT--AAA--GGTTGTACT--AAACT-CGC-TTGTTCTCT--TAA-AGATAT--TTTT-TATAAACTCACA-CGGTTTAATGGGTTGAAGAAAGCGTCTTATGAGACAGTA-A-GTAGATGGAAACAG-AAATTTGAT---T-----CTGGAA-GTCTTAA----------A---------------A---------------TACAG-CAAA-AT-CTGg
gi|10 : TGTCCGAAATGAACTATGTATTTATAAGTCCCGCAAA-ATTTA---CG---------TGGCA-TCTTACATCG--------------GT---A------TCTAT----ACGCAT-GGATAGCTCCAT-------------A-ATGGTAT--ATAT--A---T--GTATC-------------------TGCTTGAA--CACGGGATTCCACAGTTATTGTAATTT-CAATA------TAG----GCAGTA-------GTTTCCTTGACCACTGTTG---------TAAAAAATGGTTG-GA---A---A---------ACGAATAGC---AA---CTAATG---ATGAAATTCGGACTTATAT-CAAA--GCTTGTACT--GAATT-CTG-TTGTACTCT--AAA-ACATAT--ATTT-CATGAAATCACA-CGGGTTAATAAGTTGAC-------------GAAA-ATTA-TCGTATATGGAAAATG-GAATTTGAT---T-----CTG----GTGTAGAGTCTGTTAAAG---------------A---------------TGCAG-CAAA-AT-CAGGTTTTCCAAATAGAGCAA-TATGTA--AGAA--A----------TAAAATTAGAG-AAATTGTTCGAA-ATGA----TACGCG-ATATAGTATGCGT
gi|21 : GTTCGAAATATATTATGTACTCATAAGTCGCTCAAA-ATTCA---CG---------TGAAA-TTTTATATCG--------------AT---A------TTTAT----ACGA------CAGCTCTATTCAATACTTACACA-ATGGTA---T-ATGCA---T--GTATC-------------------TGTTAAAA--CACGTGATTCAAGAGTTATAGT-ATTTACAATA------TAG----ACAGTC-------GTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGA---AACGA---------GT----AGC---AA---ATAATG---AGGAAA
gi|4 : cgTATTGTGTATTTATAAGTCGAGCAAA-ATTCA---CG---------TGCAG-TTTTACTTCG--------------AT---G------TTTGT----GCGCAT-GAATAGCTCTATTCAATACCTACGCA-ATGGTA---T-AT--ACA-T--GTATC-------------------TGCTAAAA--TAAAGGATGCCAGAGTTATAGTCATTT-TAATA------TAG----GCAGTC-------GTT-----GACTACTTTTG---------TCAAAA-T-----AGA---A---ACGA------AT----AGT---AA---ATAATG---AAGAAATACGGTTTTATAT-AAAA--GTTCGTACT--AAACT-CGG-TTATTCCCT--AAATATATAT--TTTT-GATGAAATCACA-CGGGTTTATGAGTTGACGAAAGTGTCTTATGAGACAGTT-C-GTAGATGGAAAAAG-TAATTTGAT---T-----CAG----GT---------------GTAGTCTGTTAAA---A---------------TGCAG-CAGA-AT-CTGATCAGCCAG-GACTGCAG-CATGTA--AGAA--AAT-TG-AGTCTAAAATTATAG-AAAGTATTTGAA-ATG-----TACGCG-ATATGATGTGAGTGCTATAGT---ACGCATTGCAGCCGTTTCACT---ATCTT-CAATTCATTTCGTTCTTAGAAAAAT-ATGGAA
gi|16 : TATTTATAAATCTCGCAAA-ATTCA---CT---------AGAAA-TTTTACATCG--------------AT---A------TTTAT----ACAAAC-GGATAGTTCTATTCAAAACCTTCACC-GTGGTA---T-AT--ACA-T--GTATC-------------------TGCTGTAA--CACTGGATTCCAGAGTTATAGTCATTT-TAATA------TAG----GCAGTC-------GTT-----GACCACTGTTG---------TAAAAA-TGGTGCGGA---AAGGA---------GT----AGC---AA---ATA------AAAAAATatt
gi|2 : attacctacactcagagactttgaaaaagcaccactTAAATCGTGCAAA-CTTCA---CG---------TGAAA-TTTTACATCGGTATATATATATATAT---A------TATAT----ATGCAA-GGATAGCTCTATCTAATACCTACATA-ATGGTA---T-AT--ACA-T--GTATCGCATAAGTCTACATATATATGCTGTAA--CACAGGAGTCCAGAGTTGTAGTCATTT-CAATA------TAG----GCAGTC-------GTT-----GACCACTGTTG---------TTATTA-TGATTGCGA---A---ACGA------GT----AGC---AA---AAAATG---AGGAAATTCT----TAAAT--GAA--GTTCGTACA--AAACT-CGG-TTATTCTCT--AAA-AGATAT--TTCT-GATGAAATCACA-CGGGTTTATTGGTTAACGAAAGTGTCTTATGAGACAGTT-C-GTAGATGGAAAAAG-AAATTTGAT---G-----CTA----GT---------------GAAGAGTCTGTTAATAA---------------TGCTG-CAAA-AT-CTGGTCGGCCAAAGAAAGCAA-CATGTA--AG---------G-C-------ATT-----------TTCGAA-ATGA----TGTACG-TGGTAATGTGCGTGATACAGC---ACGCTTTGCAGGCTTTTAACT---ATCTT-CAACTCATTTCGTTCTGAGAGAAATCATGAAAggtcgaaatgattcactagtagttcattccattctgagaaaaattatgaa
gi|7 : gtttggAT-TGAAAGCGCTATTTAATACCTACAGA-CTGGTATACA-A---A---T--GTATC-------------------TGCTGAAA--CAAGGGAATTCAAAGTTATAGTCATTT-CATTAAACTATTAG----GCAGTT-------GCT-----GACCACTGTTT---------TAAAA--TGGCTAGGA---AGCGA---------GT----AGC---AA---ATAACG---AGAAAATTCGGATTAATAC-CAAA--GTTCGTACT--------CGG-TTGTTTTCTTTAAA-ATATAT--TGT--GCTGAAATCACAAGGGGTTTTGGGGTTGACAAAAGTGTCTTATGAGACAGTT-C-GTAGATGG-GAAAT-TAATTCGAT---T-----CTG----TT---------------A---------------AAA-------------TGTAGACAAATATTCTGGTCGGCCTAAGACTACAA-CATGTA--AGAA--AGT-CG-GGTCTTAAATTAGAG-CAATTGTTCGAA-ATGA----TACGTA-ACATAATGTTCGTGACATAGC---ATGCAATACTGTCGTTTTACT---ATCTT-CAGTTGA-TTCGTTCTGTGAAAAgttagga
gi|23 : ctgtcctcataacgcatgtactgtcatcataatgtaagttctagggcTA---C-AC--A---T--GTATC-------------------TGCTGAAA--CACGGGATTCAAGAGTTATAGCCATTT-CAACA------TAG----GCAGTC-------GTT-----GACCACTCTTG---------TAAACA-TGGTAAGGA---A---ACGAGTGCATGT----AGC---AA---ATAATG---AGGAA
gi|27 : caatcggacgagtttccttactgtcactcctaGGATTTCAGAGTAATAGTCGTTT-CAATA------TAG----GCAGcggttgttctctaaagtatatttttggatggaatcac
gi|25 : gATCCTACA-TGATATTCATTA-AAATA------TAG----CCAGTC-------GTT-----GACCACCACTA---------CAGCAA-GAGTTGAGA---A---A---------CG----GGT---AA---ATAATATTTCGGAAATTAGGGTTTACATACAA
gi|12 : tgcaattttacgtggcgagctctacaaccatagggtcaccgctTT-CAATA------CAGCTTTAAAATCATTCTCAGTT-----GATCACTGTTA---------TAAAAA-CAGTTG-GA---A---A---------ACG---AGTTGAAA---ATATTA---AAGAAATTACAGCTAGTAC-TAAA--GTTTAAGCG--AAACT-AGG---GCTTTCC--A-------AT--TTTT--ACAGAATTGGG-CAAGTTTATAGGTATTCTGAGGTCTCTTTT-------TATT-GTAGGCAGAAGGAT-AAATTTGATACAT-----GTGTAGAGTGTTAAA---------G---------------A---------------TGCTG-GAAA-AG-CTGGGCAGCCAGTGACTGCAA-C-TGCA--ACAGGTAA--TG-TCTCAAAAAGTAAAA-ATATTATTAGAA-ACGA----TG-GTAGATATACTTTTCGCAATATTGCTTTA-AC--TGCCAACATATTGCT----TTTGAGAGTACATTTCATTtttagt
gi|14 : tatatgcatggatcactagGTC-------GTT-----AACCATTGTTG---------TAAAAA-TGGTTG-GA---G---A---------CC----AG-----------------------------ACTTATAT-CAAA--ATTCGTACT--AAACT-CGGGTTGTTCGCT--AAA-TTATAT--TTTT-GATGAAATCACA-CGGGTTTAATGGTTGACGAAAGTGTCTTATGAGAGAGTT-C-GTCGATTGAAAAAA-AAATA-AAT---TAAAGTCTG----TT---------------G---------------AAGAGTCTGTTAGAACTGCAA-CAAA-AA---GTTCGGCCAAAAACAGCAA-CATGTA--AGAA--ATT-CG-TGTCTAAAATCAGAG-AAATTGTTCGAA-ATGA----TGCGCG-ATATAATGTGTGTGATATAGC---ACGCATTGAAGGCGTTTCACT---GTCTT-CAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|20 : atacatCTTATAT-CAAA--ATTCGTACT--AAAATATGG-CTTTTGTCT--AAA-Agt
gi|15 : ggggtgttcgaaatgtattgtgtatttataagtcgcgcaaaattcatgtgaaattttacattgatttaattcgcattgattagcttattcaatactacacactagtgtatacaagaatttgctgaaacacgggattccagagttatagtcatttcattattggcattagttgatcaccgttgtaa-CAAA--GTTCGTAAT--AAACT-CAG-TTGTACTTT--GAA-ACGTAT--TTCT-GACGAAATCACA-CGGAATTATGGGACGACGAAAGTG-CTTATGAGACAGTT-C-GTTGCTGGAAAAAT-AAATTTGAT---T-----CTG----GT---------------GTAGTCTGTTAAAA--A---------------TGCAG-TAAA-AT-CTGGTCGGTCAAAGACAGCAA-CATGTA--CGAA--ATT-TT-CATTT-AAATTAGAC-AATT--TTTGGATATAA----TGCAAG-ATGTAATGTTTGTGATATAAC---ACGCATTGCAGGCGTTTCACA---ATCTT-CAGTTAATTTCGTCATGATAAAAATCATGAAA
gi|23 : GG-TTGTTCTCT--AAA-GTATAT--TTTTGGATGGAATCACacta
gi|26 : caatcggacgagtttccttactgtcactcctatacacatgtatctgctgaaacacgggattcaagagttatagccatttcaacataggcagtcgttgaccactcttgtaaacatggtaaggaaacgagtgcatgtagcaaataatgaggaacT--AAT-AAGTATC-TTTT-AA--GATTCACA-AGAGTTAATGGGTTGGCAAAAGTGTCTTATGAGACAGTT-T-GTAGATGGAAAAAAGGAATTTGAT---T-----CTG----GT---------------G---------------
gi|17 : tctattgttctaccattcataGAGTTTCGGGGTTGAAGAAAGTGTCTCATGAGACAGTT-C-GTAGCTAA-AAAAA-GAATTTGAT---T------TG----GTATA------------G---------------AGTCTGTTAAAAT---TGCAG-GAAA-GT-ATTTTCGGCCAAAGACTGCAA-CATGTA--AGAA--AAT-CG-TGTCTTAAATTAGAG-GCATTGTTCAAA-TTGACCCTTG-ACA-ATA-AGTG----TGACATAGT---AGGCATTGCAGGCGTTTTACT---ATCTT-CATTTGAAATCGTTCTGAGAAAAATTATGAAAtag
gi|18 : GGTAGACGAAAGTGTCTTATGAGACAGTT-C-GCAGATGGAAAAAG-AAATTTGAC---T-----CTG----GT---------------GTAGAGTCTGTTAAA-A---------------TGCAG-CAAA-TT-CTGGTCGGCCAAAGACAGCAA-CATGTA--A-AA--AAC-CG-TGTTT-AAACTA-AG-AAAT-GTTCGAA-ATTA----TGCGCG-ATATAATGTGCGTGATATAGC---ACGCATTGCAGGTGTTTCACT---ATCTT-CATTTTATTTCGTTCTCAGAAAAATCATGAAA
gi|19 : ---------------A---------------TGCAA-TAAA-AT-CTGGTCGTCCAAAGACAGCAG-CATGTA--GGCA--AAT-CA-TGTCTAGAATTAGAATAAAT-GTTCAAA-ATGA----TGAATT-ATATAATGTGCGTGATATAGC---ACGCATTGCAGTCGTTTCACT---GTATT-CAGTTCATTGCGTTT----AGAAATCAgttag
gi|16 : cttataaacagtcggaacgtgtaaaaaattcagcatagttgatttgattctggagtaaagtactatgttaaacTTCACT---A---G-TAGTTCATTCCATTCTGAGAAAAATTATGAgaaaattt
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111
lowQualScore : 11111111111 11111111111111 333333333333333333333333333 4444444444444 33333333333333333333333333333333333333333333333
lowQualScore : 33 11111111111 44444444444444 777777 55555 2 2 33 999999999999999999999999999 33 2 555555 1 44444 777777777 2 333 4444444444444 333 2 1 2 33 33 2 2 33 2 1 33 55 2 0 2 2 333 555 4444 00000000000000000000000000000000000000000000000 7777777 2 2 2 2 33 55 11 1 1 2 444
lowQualScore : .. ........... .............. ...... ..... . . .. ........................... .. . ...... . ..... ......... . ... ............. ... . . . .. .. . . .. . . .. .. . . . . ... ... .... ............................................... ....... . . . . .. .. .. . . . ...
lowQualScore : 44 99999999999 77777777777777 222222 99999 4 4 11 777777777777777777777777777 11 1 888888 9 88888 666666666 1 777 3333333333333 999 4 5 2 22 22 4 4 11 2 8 22 11 4 7 2 2 777 888 5555 88888888888888888888888888888888888888888888888 2222222 2 2 2 4 22 44 88 6 8 5 777
consensus : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGA---A---A-G-------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGG----TG----------T--AGAGTC-G-T------------A-----------T-------GCAG-CAAA-A-TCTGGTCGGCCAAAGACAGCAAC-ATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGAT-ATAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
Reference ( family-406 ) : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGA---A---A---------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGG----TG----------T--AG-------T------------A-----------T-------GCAG-CAAA-A-TCTGGTCGGCCAAAGACAGCAAC-ATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGAT-ATAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|1 : GTGTTCGAAATGTATTGTGTATTTATAAGT-----------------------TCACGGGAAATTTTACATTG--------------ATA------TTTATACGCATG------A-TAGCTCTGT-CCAATACCTAATCAATGGTATA--A---------------------A--C--AGTTATTTGCTGAAATACGGGATTTTAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----TACCACTGTTGGGAAACGGTTGGAAA-TGGTTGGGA---A---ACGA------GTAGCTAATACTG---AGAAAATT-CGGA---A-AC-CAAACTATTT---CT--AAGCT-CGA-TTGTTCTCT--AAA-ATATAT--TTT--GATGAAAT-TACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGGCAGTTTATAAATGG-AAAAAGAAAT---TTGA---TGCTGG----TG----------T--AGAGTCTGTTGGAA--------A-----------T-------GAAG-CAAA-A-GCTGGTTGGCCAAAGACAGCAATTATGTAAAAA--T-ACCGTGACTTAATTTAGAGAAAATGTTCGAAATAATGCAAGAA-ATAATTTGCGTGAGAAAGCACACATTGCAGACGTGTCATT---ATCTTCAGGTAATTTCGTTCTAAGAAAAATCATGAAA
gi|10 : cgaggaTGTCCGAAATGAACTATGTATTTATAAGTC--CC-----------GCAAAATTTACGTGGCATCTTACATCG--------------GTA------TCTATACGCATG-----GA-TAGCTC--------------CATAATGGTATA--T---------------------A--TATG--TATCTGCTTGAACACGGGATTCCACAGTTATTGTAATTT-CAATA------TAGGCA-GTAGTTTCCTTGACCACTGTTG---------TAAAAAATGGTTGGAA---A---ACGA------ATAGCAACTAATG---ATGAAATT-CGGACTTATAT-CAAA--GCTTGTACT--GAATT-CTG-TTGTACTCT--AAA-ACATAT--ATTT-CATGAAAT-CACACGGGTTAATAAG-TTGACGAAAAT----TAT---------CGTATATGG-AAAATGGAAT---TTGA---TTCTGG----TG----------T--AGAGTCTGTT------------AAAGA-------T-------GCAG-CAAA-A-TCAGGTTTTCCAAATAGAGCAAT-ATGTAAGAA--A---------TAAAATTAGAGAAATTGTTCGAAATGATACGCGAT-ATAGTATGCGTgt
gi|11 : GGTGT-CAAAATGTATTGTGTATTTATAAGTC--GC-----------ACAGAATTCACTTGAAATTTTACATCT--------------ATA------TTTATACGCATG-----GA-TACCTCTAC-TCAATACCTACACAATGGTATA--TAC-------------------A--T--G--CATCTGCTGGAACACGGGGTCCCA-AATTATAGTTACTT-CTATA------TGGGCA-ATCGTT-----GACCACTAATG---------TAAAAA-TG--TGGGAAACA---A---------GTGGCAAATAATT---AGGAAATT-CGCACTAATGT-CAAA--GTTCGTCCTAAAAACT-CGA-CTGTTCTCT--AAA-CAATAA--ATTT-GGTGAAAT-CACA-------------------AAAGTGTTTTATGAGGCGAACTGCAAAAAA-AAAAAGAAAT---TTGA---TTTTGG----TG----------T--AGAGTC---T------------G-----------TTAAAAAAGCAG-CAAA-A-TC------ACCATAGACAGCAAC-ATGTAAAAA--ATGTGATGTCGAAAATTAGAAA
gi|12 : gaggGTT-----GATCACTGTTA---------TAAAAA-CAGTTGGAA---A---ACGA------GTTGAAAATATTA---AAGAAATTACAG-CTAGTAC-TAAA--GTTTAAGCG--AAACT-AGG---GCTTTCC--AA-------T--TTTT--ACAGAAT-TGGGCAAGTTTATAGG-TATTCTGAGGTCTCTTTTTA------TTGTAGGCAG-AAGGATAAAT---TTGA---TACATG----TG----------TAGAG-------TGTTAAAG-----A-----------T-------GCTG-GAAA-A-GCTGGGCAGCCAGTGACTGCAAC--TGCAACAGGTA-AT-GTCTCAAAAAGTAAAAATATTATTAGAAACGATGGTAGAT-ATACTTTTCGCAATATTGC
gi|13 : tatatgcatggatcactagttcaatacagctttaaaatcattctcaTGTTCGAAATATATTGTGTATTTATAAGTT--GT-----------GCAAAATTCACGTGAAAGTTTGCATCG--------------ATACATGTATTTATACGCATG-----GA-TAACTCTAT-TCAATATCTACACAATGGAATA--TGC-------------------A--T--G--TATCTGCTGAAACACGAGATTCCAGAGTAATTGTTATTT-CAATA------TAAGCA-GTCGTT-----AACCA---TTT---------TAACA-----TTGGGA---A---ACGA------GTAGCAAATAATG---AGGAAATT-AGGACTTGTAT-AAAG--GTT-GTACT--AAACT-CGC-TTGTTCTCT--TAA-AGATAT--TTTT-TATAAACT-CACACGGTTTAATGGG-TTGAAGAAAGCGTCTTATGAGACAGTAAGTAGATGG-AAACAGAAAT---TTGA---TTCTGGAAGTCT----------T--AA-------A------------A-----------T-------ACAG-CAAA-A-TCTGtttaactgccaacatattgcttttgagagtacatttcatt
gi|14 : -GTCGTT-----AACCATTGTTG---------TAAAAA-TGGTTGGAG---A------------------------------------C-CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGGGTTGTTCGCT--AAA-TTATAT--TTTT-GATGAAAT-CACACGGGTTTAATGG-TTGACGAAAGTGTCTTATGAGAGAGTTCGTCGATTG-AAAAAAAAATAAATTAAA--GTCTGT----TG----------A--AGAGTCTGTT------------AGAAC-------T-------GCAA-CAAA-A-A--GTTCGGCCAAAAACAGCAAC-ATGTAAGAA--A-TTCGTGTCTAAAATCAGAGAAATTGTTCGAAATGATGCGCGAT-ATAATGTGTGTGATATAGCACGCATTGAAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|15 : atacat-CAAA--GTTCGTAAT--AAACT-CAG-TTGTACTTT--GAA-ACGTAT--TTCT-GACGAAAT-CACACGGAATTATGGG-ACGACGAAAGTG-CTTATGAGACAGTTCGTTGCTGG-AAAAATAAAT---TTGA---TTCTGG----TG----------T--AG-------TCTGTTAAAA---A-----------T-------GCAG-TAAA-A-TCTGGTCGGTCAAAGACAGCAAC-ATGTACGAA--A-TTTTCATTTAAA-TTAGACAA-TTTTTGGATATAATGCAAGAT-GTAATGTTTGTGATATAACACGCATTGCAGGCGTTTCACA---ATCTTCAGTTAATTTCGTCATGATAAAAATCATGAAAgt
gi|16 : TATTTATAAATC--TC-----------GCAAAATTCACTAGAAATTTTACATCG--------------ATA------TTTATACAAACG-----GA-TAGTTCTAT-TCAAAACCTTCACCGTGGTATA--T---------------------ACAT--G--TATCTGCTGTAACACTGGATTCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTGCGGA---AAGGA---------GTAGCAAATAAacta
gi|16 : attacctacactcagagactttgaaaaagcaccactTTCACT---AGT---AGTTCATTCCATTCTGAGAAAAATTATGAAaaaaatggtcgaaatgattcactagtagttcattccattctgagaaaaattatgaa
gi|17 : attacctacactcagagactttgaaaaagcaccacttatttataaatctcgcaaaattcactagaaattttacatcgatatttatacaaacggatagttctattcaaaaccttcaccgtggtatatacatgtatctgctgtaacactggattccagagttatagtcattttaatataggcagtcgttgaccactgttgtaaaaatggtgcggaaaggagtagcaaataaaaaaatggtcgaaatgaGAGTTTCGGGG-TTGAAGAAAGTGTCTCATGAGACAGTTCGTAGCTAA-AAAAAGAA-T---TTGA---TT-TGG----TA----------T--AGAGTCTGTT------------AAAAT-------T-------GCAG-GAAA-G-TATTTTCGGCCAAAGACTGCAAC-ATGTAAGAA--A-ATCGTGTCTTAAATTAGAGGCATTGTTCAAATTGACCCTTGACAATAA---GTGTGACATAGTAGGCATTGCAGGCGTTTTACT---ATCTTCATTTGAAATCGTTCTGAGAAAAATTATGAAA
gi|18 : GG-TAGACGAAAGTGTCTTATGAGACAGTTCGCAGATGG-AAAAAGAAAT---TTGA---CTCTGG----TG----------T--AGAGTCTGTT------------AAAA--------T-------GCAG-CAAA-T-TCTGGTCGGCCAAAGACAGCAAC-ATGTAA-AA--A-ACCGTGTTTAAA-CTA-AGAAAT-GTTCGAAATTATGCGCGAT-ATAATGTGCGTGATATAGCACGCATTGCAGGTGTTTCACT---ATCTTCATTTTATTTCGTTCTCAGAAAAATCATGAAA
gi|19 : AT---TTGA---TTCTGG----AG----------TAAAG-------TACTATGTTAAACA-----------T-------GCAA-TAAA-A-TCTGGTCGTCCAAAGACAGCAGC-ATGTAGGCA--A-ATCATGTCTAGAATTAGAATAAATGTTCAAAATGATGAATTAT-ATAATGTGCGTGATATAGCACGCATTGCAGTCGTTTCACT---GTATTCAGTTCATTGCGTTT----AGAAATCA-GAAAgttag
gi|2 : cttataaacagtcggaacgtgtaaaaaattcagcatagttgTAAATC--GT-----------GCAAACTTCACGTGAAATTTTACATCGGTATATATATATATATA------TATATATGCAAG-----GA-TAGCTCTAT-CTAATACCTACATAATGGTATA--TACATGTATCGCATAAGTCTACA--T--A--TATATGCTGTAACACAGGAGTCCAGAGTTGTAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TTATTA-TGATTGCGA---A---ACGA------GTAGCAAAAAATG---AGGAAATT-C----TTAAAT--GAA--GTTCGTACA--AAACT-CGG-TTATTCTCT--AAA-AGATAT--TTCT-GATGAAAT-CACACGGGTTTATTGG-TTAACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TGCTAG----TGAAGAGTCTGTT--AA-------TA-----------A-----------T-------GCTG-CAAA-A-TCTGGTCGGCCAAAGAAAGCAAC-ATGTAAGG-------C---------ATT----------TTCGAAATGATGTACGTG-GTAATGTGCGTGATACAGCACGCTTTGCAGGCTTTTAACT---ATCTTCAACTCATTTCGTTCTGAGAGAAATCATGAAAattt
gi|20 : gtttggGGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCATGTGAAATTTTACATTG--------------AT-------TTAATTCGCATT-----GATTAGCT-TAT-TCAATA-CTACACACTAGTGTA--T---------------------A--CAAG--AATTTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CATTA------TTGGCA-TTAGTT-----GATCACCGTTG---------TAAgttagga
gi|20 : ggACTTATAT-CAAA--ATTCGTACT--AAAATATGG-CTTTTGTCT--AAA-Acttatatcaaaattcgtactaaaatatggcttttgtctaaaa
gi|21 : ggggtgttcgaaatgtattgtgtatttataagtcgcgcaaaattcatgtgaaattttacattgatttaattcgcattgattagcttattcaatactacacactagtgtatacaagaatttgctgaaacacgggattccagagttatagtcatttcattattggcattagttgatcaccgttgtaGTTCGAAATATATTATGTACTCATAAGTC--GC-----------TCAAAATTCACGTGAAATTTTATATCG--------------ATA------TTTATACG----------A-CAGCTCTAT-TCAATACTTACACAATGGTATA--TGC-------------------A--T--G--TATCTGTTAAAACACGTGATTCAAGAGTTATAGT-ATTTACAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGA---AACGA---------GTAGCAAATAATG---AGGAAA
gi|22 : cgGGTGTTTGAAGTGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATT------------------------TTTATACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATATAT---------------------A--T--G--TATCTGCTGAAACACGGGGTTCAGGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTC-----GACCACTGTTG---------T-AGAA-TGGGTGG-------------------------AATAATG---CGGAAATT-CGG
gi|23 : aTACA--C---------------------A--T--G--TATCTGCTGAAACACGGGATTCAAGAGTTATAGCCATTT-CAACA------TAGGCA-GTCGTT-----GACCACTCTTG---------TAAACA-TGGTAAGGA---A---ACGAGTGCATGTAGCAAATAATG---AGGAA----CGG--TT-----------GTTC---------------------TCT----AAA-GTATAT--TTTTGGATGGAAT-CAC
gi|24 : caatcggacgagtttccttactgtcactcctaGGTGTTAGAAATGTATTGTGTATTTATAAA--------------------------ACGTGAAATCTTACATCG--------------ATA------TATGTACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATA--T---------------------ACAT--G--TATCTGCAAAAACACGGGATTCCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GCCGTC-----GACCACTATTG---------TAAAA
gi|25 : aggATATTCATTA-AAATA------TAGCCA-GTCGTT-----GACCACCACTA---------CAGCAA-GAGTTGAGA---A---A---------CGGGTAAATAATATTTCGGAAATT-AGGGTTTACATACAA
gi|26 : tgcaattttacgtggcgagctctacaaccatagggtcaccgctatcctacatgT--AAT-AAGTAT--CTTT---TAAGATTCACAAGAGTTAATGGG-TTGGCAAAAGTGTCTTATGAGACAGTTTGTAGATGGAAAAAAGGAAT---TTGA---TTCTGG----TG----------T--AG-------tttagt
gi|27 : tctattgttctaccattcataGGGATTTCAGAGTAATAGTCGTTT-CAATA------TAGGCA-G
gi|3 : GGTGTTCGAAATATATTGCGTATTTATAAGTT--GT-----------GCAAAATTCACATGAAATTTGACATCA--------------ATA------TTTACATGAATG-----GA-TAGCTCTAT-TCAATATTTACAAAATGGTAAA--T---------------------A--T--G--TATCTGCTGAAATACAGGATTCTAGAGTTATAGTCATTT-CAATA------CAGGAA-GTTGTT-----GACCACTGTTG---------TAAAAA-TGGTTGAGA---A---A---------GCAGCAAATAATG---AGAAAATT-CTGGCTTGTAT-CAAA--GTTTGTACT--AAACT-TGG-TTGGTCTCT--AAA-AGATAT--TTTT-AATGAAAT-CACATGGGTTTATGGG-TTGACCAATGTGTCTTATGAGACAGTATGTAGATGG-CAAAAAAAAT---ATGA---TTCTGG----TG-----------------------------------A-----------T-------GCAG-CAAA-A-TCTGGTCGGCCAAAGACAGCAAC-ATGTAAGAA--A-ATTGTGTCTAAAATTAGAGAAATGGTTCAAAGTGATGCGCAAT-ATAATGTGCATGATATAGCA-GCATTGCAGGCATTTCACT---ATCTGCAGTTCATTTCGTTTTGAGAAAAATCATGGAA
gi|4 : TATTGTGTATTTATAAGTC--GA-----------GCAAAATTCACGTGCAGTTTTACTTCG--------------ATG------TTTGTGCGCATG-----AA-TAGCTCTAT-TCAATACCTACGCAATGGTATA--T---------------------ACAT--G--TATCTGCTAAAATAAAGGATGCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACTACTTTTG---------TCAAAA-TAG----AA---ACG-A---------ATAGTAAATAATG---AAGAAATA-CGGTTTTATAT-AAAA--GTTCGTACT--AAACT-CGG-TTATTCCCT--AAATATATAT--TTTT-GATGAAAT-CACACGGGTTTATGAG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGTAAT---TTGA---TTCAGG----TG----------T--AG-------TCTGTTAAA----A-----------T-------GCAG-CAGA-A-TCTGATCAGCC-AGGACTGCAGC-ATGTAAGAA--A-ATTGAGTCTAAAATTATAGAAAGTATTTGAAATG-TACGCGAT-ATGATGTGAGTGCTATAGTACGCATTGCAGCCGTTTCACT---ATCTTCAATTCATTTCGTTCTTAGAAAAAT-ATGGAAcgaa
gi|5 : TGTTCAAAATGTATTGTACATTTATAAGTCCTGCAAATATTCAGGGCAAAATTTATGTGTAATTTTACATTG--------------AAA------TTTATACGCATG-----TG-TAGCTCTAT-TCAATACCAACACAATG-----------------------------------G--TAT--------ACA---------------ATAGTTATTT-CAATA------TAGGCA-ATCGTT-----GACCACTGTAG---------TAAAAA-TGGTTGGGA---A---ATGA------GTAGCAAACAATT---AGGAAATT-CGGATTTATAT-CAAA--GTTCAAACT--AAACT-TGG-TTGTTGTCT--AAA-AGGTAT--TTTT-TATGAAAT-CACACGGGTTTATGGG-TTGAAGAAAGTGTCTTATGAGACAGTTCAAAGATGG-AAAAATAAAT---TTGA---TTCTGG----TG----------C--AGAGTCTGTT------------AAAAC-------T-------GCAG-CAAA-A-TCTGGTCCACCAAAGACAGCAAC-ATGTAAG-A--A-ACCATGTCTAAAATAAGAGAAATTGTTTGAAATGATGCGCGAT-ATAATTTGCATGATATAGCATGAATCACAGGCATTTCACT---ATCTTCAGTTCATTTCATTCTGACAAAAATCAGGAAAatt
gi|6 : GGTGTTCGAAATGTATTGTGTTTTAATAAGTT--GC-----------ACAAAATTCACGTGGAATTTAACATCG--------------ATT------TTTATTCGAATGAATAGGA-TAGCTCTAT-TCAATACCTCCACAATGGTATA--T---------------------ACAT--G--TATCTGCTGAAACACGTGATACCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TACAAA-TGTTTGGGG---AACCA---------GTAACACATAATG---A---------GGACTCATAT-GAAA--ATTCGTACT--AAACT-CTG-TTGTTATCT--AAA-ATATAG--ATTT-GATGAAAT-CACAT-------------------AAGTGTCTGAAGAGGCAGTTCGTAGAT-G-AAAAAGAAA------AAACGTTCTTG----TG----------T--AT-------T------------GTCAGCTAAAACT-------GCAG-CAAA-A-TC------ACCAAAGACAGCCAC-TTGTAAGAA--A-ATGGCGTCTAAAATAAGAGAAATT----GAGATGATGTGTGAC-ATAATA---GTGATATAGCACGCATTGCAGCCGTTTCACTTCCATCTTTTTTCCATTTCGTTTTGA-ATTAATTACGAAAt
gi|7 : agaGCATT-----GA-AAGCGCTAT-TTAATACCTACAGACTGGTATA--C---------------------AAAT--G--TATCTGCTGAAACAAGGGAATTCAAAGTTATAGTCATTT-CATTAAACTATTAGGCA-GTTGCT-----GACCACTGTTT---------TAAAA--TGGCTAGGA---AGCGA---------GTAGCAAATAACG---AGAAAATT-CGGATTAATAC-CAAA--GTTCGTACT--------CGG-TTGTTTTCTTTAAA-ATATAT--TGT--GCTGAAAT-CACAAGGGGTTTTGGGGTTGACAAAAGTGTCTTATGAGACAGTTCGTAGATGG--GAAATTAAT---TCGA---TTCT-G----T-----------T--AA-------A------------A-----------T-------GTAGACAAATATTCTGGTCGGCCTAAGACTACAAC-ATGTAAGAA--A-GTCGGGTCTTAAATTAGAGCAATTGTTCGAAATGATACGTAAC-ATAATGTTCGTGACATAGCATGCAATACTGTCGTTTTACT---ATCTTCAGTTGA-TTCGTTCTGTGAAAAgta
gi|8 : ctgtcctcataacgcatgtactgtcatcataatgtaagttctaggTGTTCAAAATGTATTGTGTATTTATTAGTG--GC-----------ACAAAATTAAAGTGAAATTTTACATCA--------------ATA------TTTATATGTATG-----GG-TAGCTCTTT-TTAATACTTACACAATGGTATA--TAG-------------------A--T--C--TATCTGCTGAAACACTGGATTCCAGAGTTGTAGTTA-TT-CAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGA---A---A---------CTA--ATACAAAG---AGGAAATT-TTGACTTATAT-CAAA--GTTTGTACT--AAACT-CTG-TTGT--TCT--AAA-AGATAT--TTTT-GAT---AG-CA---------------------AAAGTGTCTTATGAGA-------TGGA----AAAAAGAAAT---TTGA---TTCGGG----TT----------TAAAG-------TCTGTAAAAA---A-----------T-------GCAG-TGAA-A-TCTTGTCGGCCAAAGACAGTAAC-ATGT---------------------ATTAGA-AAATTGTTGGAAATGATACGCAAT-ATAATATGCGTAATATAGCATGAATCACAGGCGTTTCACT---ATCTTCAGTTCATTTTATTCTTAGAAAAATCACGGAA
gi|9 : ggaaGGTGTTCGAA-TGTATTATGTATTTATAAGTC--GT-----------GCAACATTCACTTGGAATTATACATCA--------------ATA------TTTATAAACATG-----GA-TAGCT-TATATCGATACCTACACAATGGTATA--A---------------------A--C--A--TGTC-GTTGAg
gi|9 : gTA------TAAACATGTCGTT-----GACCATTGTTG---------TAAAAA-TGGTTG------------------------CAGAC----------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGG-TTGTTCGCT--AAA-ATATATATTTTT-TTTGAAAT-TACACGAGTTTAATGG-TTGACAAAAGTGTCTGATGAGAGAGTTCGTAGATTG-TCAAATAAAT---TTGA---ATCGTG----TG----------T--AGAGTCAGTT------------AGAAA-------T-------GCAA-TAAA-A-TCTGTTCAGCCAAAAACAGCAAC-ATGTAAGAA--A-TTCGTGTCTAAAATTAGA--AATTGTTCGAAATTATGCG--AT-ATAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATTATGAAAccattgttgtaaaaatggttgcagaccagacttatatcaaaattcgtactaaactcggttgttcgctaaaatatatattttttttgaaattacacgagtttaatggttgacaaaagtgtctgatgagagagttcgtagattgtcaaataaatttgaatcgtgtgtagagtcagttagaaatgcaataaaatctgttcagccaaaaacagcaacatgtaagaaattcgtgtctaaaattagaaattgttcgaaattatgcgatataatgtgcgtgatatagcacgcattgcaggcgtttcactgtcttcagttcatttcgttctgagaaaaattatgaaag
Alignments
lowQualScore : 11111111111 11111111111111 333333333333333333333333333 4444444444444 99999999999999999999
lowQualScore : 33 11111111111 44444444444444 777777 55555 2 2 33 999999999999999999999999999 33 2 555555 1 44444 777777777 2 22 8888888888888 333 2 1 2 33 33 2 2 33 2 1 33 55 2 0 2 2 333 555 77777777777777777777 2 2 2 2 2 33 55 11 1 1 2 444
lowQualScore : .. ........... .............. ...... ..... . . .. ........................... .. . ...... . ..... ......... . .. ............. ... . . . .. .. . . .. . . .. .. . . . . ... ... .................... . . . . . .. .. .. . . . ...
lowQualScore : 44 99999999999 77777777777777 222222 99999 4 4 11 777777777777777777777777777 11 1 888888 9 88888 666666666 1 99 2222222222222 999 4 5 2 22 22 4 4 11 2 8 22 11 4 7 2 2 777 888 33333333333333333333 2 2 2 2 4 22 44 88 6 8 5 777
consensus : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGAA--ACGA-------G--TAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT----CTG--TTAAA-A----T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGAT-ATAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
Reference ( family-406 ) : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGAA--A--G-------G--TAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT----C-G--T-----A----T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGAT-ATAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|1 : GTGTTCGAAATGTATTGTGTATTTATAAGT-----------------------TCACGGGAAATTTTACATTG--------------ATA------TTTATACGCATG------A-TAGCTCTGT-CCAATACCTAATCAATGGTATA--A---------------------A--C--AGTTATTTGCTGAAATACGGGATTTTAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----TACCACTGTTGGGAAACGGTTGGAAA-TGGTTGGGAA--ACGA-------G--TAGCTAATACTG---AGAAAATT-CGGA---A-AC-CAAACTATTT---CT--AAGCT-CGA-TTGTTCTCT--AAA-ATATAT--TTT--GATGAAAT-TACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGGCAGTTTATAAATGG-AAAAAGAAAT---TTGA---TGCTGGTGTAGAGT----CTG--TTGGAAA----T-GAAG-CAAA-AG-CTGGTTGGCCAAAGACAGCAATTATGTAAAAA--T-ACCGTGACTTAATTTAGAGAAAATGTTCGAAATAATGCAAGAA-ATAATTTGCGTGAGAAAGCACACATTGCAGACGTGTCATT---ATCTTCAGGTAATTTCGTTCTAAGAAAAATCATGAAA
gi|10 : cgaggaTGTCCGAAATGAACTATGTATTTATAAGTC--CC-----------GCAAAATTTACGTGGCATCTTACATCG--------------GTA------TCTATACGCATG-----GA-TAGCTC--------------CATAATGGTATA--T---------------------A--TATG--TATCTGCTTGAACACGGGATTCCACAGTTATTGTAATTT-CAATA------TAGGCA-GTAGTTTCCTTGACCACTGTTG---------TAAAAAATGGTTGGAAA--A--C-------GAATAGCAACTAATG---ATGAAATT-CGGACTTATAT-CAAA--GCTTGTACT--GAATT-CTG-TTGTACTCT--AAA-ACATAT--ATTT-CATGAAAT-CACACGGGTTAATAAG-TTGACGAAAA----TTA---------TCGTATATGG-AAAATGGAAT---TTGA---TTCTGGTGTAGAGT----CTG--TTAAAGA----T-GCAG-CAAA-AT-CAGGTTTTCCAAATAGAGCAA-TATGTAAGAA--A---------TAAAATTAGAGAAATTGTTCGAAATGATACGCGAT-ATAGTATGCGTgt
gi|11 : GGTGT-CAAAATGTATTGTGTATTTATAAGTC--GC-----------ACAGAATTCACTTGAAATTTTACATCT--------------ATA------TTTATACGCATG-----GA-TACCTCTAC-TCAATACCTACACAATGGTATA--TAC-------------------A--T--G--CATCTGCTGGAACACGGGGTCCCA-AATTATAGTTACTT-CTATA------TGGGCA-ATCGTT-----GACCACTAATG---------TAAAAA-TG--TGGGAAACA--A-------G--TGGCAAATAATT---AGGAAATT-CGCACTAATGT-CAAA--GTTCGTCCTAAAAACT-CGA-CTGTTCTCT--AAA-CAATAA--ATTT-GGTGAAAT-CACA-------------------AAAGTGTTTTATGAGGCGAACTGCAAAAAA-AAAAAGAAAT---TTGA---TTTTGGTGTAGAGT----CTG--TTAAAAA----A-GCAG-CAAA-AT-C------ACCATAGACAGCAA-CATGTAAAAA--ATGTGATGTCGAAAATTAGAAA
gi|12 : gaggGTT-----GATCACTGTTA---------TAAAAA-CAGTTGGAAA--ACGA-------G--TTGAAAATATTA---AAGAAATTACAG-CTAGTAC-TAAA--GTTTAAGCG--AAACT-AGG---GCTTTCC--AA-------T--TTTT--ACAGAAT-TGGGCAAGTTTATAGG-TATTCTGAGGTCTCTTTTTA------TTGTAGGCAG-AAGGATAAAT---TTGA---TACATGTGTAGAGT------G--TTAAAGA----T-GCTG-GAAA-AG-CTGGGCAGCCAGTGACTGCAA-C-TGCAACAGGTA-AT-GTCTCAAAAAGTAAAAATATTATTAGAAACGATGGTAGAT-ATACTTTTCGCAATATTGC
gi|13 : tatatgcatggatcactagttcaatacagctttaaaatcattctcaTGTTCGAAATATATTGTGTATTTATAAGTT--GT-----------GCAAAATTCACGTGAAAGTTTGCATCG--------------ATACATGTATTTATACGCATG-----GA-TAACTCTAT-TCAATATCTACACAATGGAATA--TGC-------------------A--T--G--TATCTGCTGAAACACGAGATTCCAGAGTAATTGTTATTT-CAATA------TAAGCA-GTCGTT-----AACCA---TTT---------TAACA-----TTGGGAA--ACGA-------G--TAGCAAATAATG---AGGAAATT-AGGACTTGTAT-AAAG--GTT-GTACT--AAACT-CGC-TTGTTCTCT--TAA-AGATAT--TTTT-TATAAACT-CACACGGTTTAATGGG-TTGAAGAAAGCGTCTTATGAGACAGTAAGTAGATGG-AAACAGAAAT---TTGA---TTCTGG----AAGT----C-T--TAAA--A----T-ACAG-CAAA-AT-CTGtttaactgccaacatattgcttttgagagtacatttcatt
gi|14 : -GTCGTT-----AACCATTGTTG---------TAAAAA-TGGTTGGAGA--------------------------------------C-CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGGGTTGTTCGCT--AAA-TTATAT--TTTT-GATGAAAT-CACACGGGTTTAATGG-TTGACGAAAGTGTCTTATGAGAGAGTTCGTCGATTG-AAAAAAAAATAAATTAAA--GTCTGTTGAAGAGT----CTG--TTAGA-AC---T-GCAA-CAAA-AA---GTTCGGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATCAGAGAAATTGTTCGAAATGATGCGCGAT-ATAATGTGTGTGATATAGCACGCATTGAAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|15 : atacat-CAAA--GTTCGTAAT--AAACT-CAG-TTGTACTTT--GAA-ACGTAT--TTCT-GACGAAAT-CACACGGAATTATGGG-ACGACGAAAGTG-CTTATGAGACAGTTCGTTGCTGG-AAAAATAAAT---TTGA---TTCTGGTGTAG--T----CTG--TTAAAAA----T-GCAG-TAAA-AT-CTGGTCGGTCAAAGACAGCAA-CATGTACGAA--A-TTTTCATTTAAA-TTAGACAA-TTTTTGGATATAATGCAAGAT-GTAATGTTTGTGATATAACACGCATTGCAGGCGTTTCACA---ATCTTCAGTTAATTTCGTCATGATAAAAATCATGAAAgt
gi|16 : TATTTATAAATC--TC-----------GCAAAATTCACTAGAAATTTTACATCG--------------ATA------TTTATACAAACG-----GA-TAGTTCTAT-TCAAAACCTTCACCGTGGTATA--T---------------------ACAT--G--TATCTGCTGTAACACTGGATTCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTGCGGAA--A--GGA-----G--TAGCAAATAAacta
gi|16 : attacctacactcagagactttgaaaaagcaccactTTCACT---AGT---AGTTCATTCCATTCTGAGAAAAATTATGAAaaaaatggtcgaaatgattcactagtagttcattccattctgagaaaaattatgaa
gi|17 : attacctacactcagagactttgaaaaagcaccacttatttataaatctcgcaaaattcactagaaattttacatcgatatttatacaaacggatagttctattcaaaaccttcaccgtggtatatacatgtatctgctgtaacactggattccagagttatagtcattttaatataggcagtcgttgaccactgttgtaaaaatggtgcggaaaggagtagcaaataaaaaaatggtcgaaatgaGAGTTTCGGGG-TTGAAGAAAGTGTCTCATGAGACAGTTCGTAGCTAA-AAAAAGAA-T---TTGA---TT-TGGTATAGAGT----CTG--TTAAA-A----TTGCAG-GAAA-GT-ATTTTCGGCCAAAGACTGCAA-CATGTAAGAA--A-ATCGTGTCTTAAATTAGAGGCATTGTTCAAATTGACCCTTGACAATAA---GTGTGACATAGTAGGCATTGCAGGCGTTTTACT---ATCTTCATTTGAAATCGTTCTGAGAAAAATTATGAAA
gi|18 : GG-TAGACGAAAGTGTCTTATGAGACAGTTCGCAGATGG-AAAAAGAAAT---TTGA---CTCTGGTGTAGAGT----CTG--TTAAA-A----T-GCAG-CAAA-TT-CTGGTCGGCCAAAGACAGCAA-CATGTAA-AA--A-ACCGTGTTTAAA-CTA-AGAAAT-GTTCGAAATTATGCGCGAT-ATAATGTGCGTGATATAGCACGCATTGCAGGTGTTTCACT---ATCTTCATTTTATTTCGTTCTCAGAAAAATCATGAAA
gi|19 : AT---TTGA---TTCTGGAGTAAAGTACTAT-G--TTAAACA----T-GCAA-TAAA-AT-CTGGTCGTCCAAAGACAGCAG-CATGTAGGCA--A-ATCATGTCTAGAATTAGAATAAATGTTCAAAATGATGAATTAT-ATAATGTGCGTGATATAGCACGCATTGCAGTCGTTTCACT---GTATTCAGTTCATTGCGTTT----AGAAATCA-GAAAgttag
gi|2 : cttataaacagtcggaacgtgtaaaaaattcagcatagttgTAAATC--GT-----------GCAAACTTCACGTGAAATTTTACATCGGTATATATATATATATA------TATATATGCAAG-----GA-TAGCTCTAT-CTAATACCTACATAATGGTATA--TACATGTATCGCATAAGTCTACA--T--A--TATATGCTGTAACACAGGAGTCCAGAGTTGTAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TTATTA-TGATTGCGAA--ACGA-------G--TAGCAAAAAATG---AGGAAATT-C----TTAAAT--GAA--GTTCGTACA--AAACT-CGG-TTATTCTCT--AAA-AGATAT--TTCT-GATGAAAT-CACACGGGTTTATTGG-TTAACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TGCTAGTGAAGAGT----CTG--TTAATAA----T-GCTG-CAAA-AT-CTGGTCGGCCAAAGAAAGCAA-CATGTAAGG-------C---------ATT----------TTCGAAATGATGTACGTG-GTAATGTGCGTGATACAGCACGCTTTGCAGGCTTTTAACT---ATCTTCAACTCATTTCGTTCTGAGAGAAATCATGAAAattt
gi|20 : gtttggGGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCATGTGAAATTTTACATTG--------------AT-------TTAATTCGCATT-----GATTAGCT-TAT-TCAATA-CTACACACTAGTGTA--T---------------------A--CAAG--AATTTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CATTA------TTGGCA-TTAGTT-----GATCACCGTTG---------TAAgttagga
gi|20 : ggACTTATAT-CAAA--ATTCGTACT--AAAATATGG-CTTTTGTCT--AAA-Acttatatcaaaattcgtactaaaatatggcttttgtctaaaa
gi|21 : ggggtgttcgaaatgtattgtgtatttataagtcgcgcaaaattcatgtgaaattttacattgatttaattcgcattgattagcttattcaatactacacactagtgtatacaagaatttgctgaaacacgggattccagagttatagtcatttcattattggcattagttgatcaccgttgtaGTTCGAAATATATTATGTACTCATAAGTC--GC-----------TCAAAATTCACGTGAAATTTTATATCG--------------ATA------TTTATACG----------A-CAGCTCTAT-TCAATACTTACACAATGGTATA--TGC-------------------A--T--G--TATCTGTTAAAACACGTGATTCAAGAGTTATAGT-ATTTACAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGAA--ACGA-------G--TAGCAAATAATG---AGGAAA
gi|22 : cgGGTGTTTGAAGTGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATT------------------------TTTATACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATATAT---------------------A--T--G--TATCTGCTGAAACACGGGGTTCAGGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTC-----GACCACTGTTG---------T-AGAA-TGGGTGG------------------------AATAATG---CGGAAATT-CGG
gi|23 : aTACA--C---------------------A--T--G--TATCTGCTGAAACACGGGATTCAAGAGTTATAGCCATTT-CAACA------TAGGCA-GTCGTT-----GACCACTCTTG---------TAAACA-TGGTAAGGAA--AC-GAGTGCATG--TAGCAAATAATG---AGGAA----CGG--TT-----------GTTC---------------------TCT----AAA-GTATAT--TTTTGGATGGAAT-CAC
gi|24 : caatcggacgagtttccttactgtcactcctaGGTGTTAGAAATGTATTGTGTATTTATAAA--------------------------ACGTGAAATCTTACATCG--------------ATA------TATGTACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATA--T---------------------ACAT--G--TATCTGCAAAAACACGGGATTCCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GCCGTC-----GACCACTATTG---------TAAAA
gi|25 : aggATATTCATTA-AAATA------TAGCCA-GTCGTT-----GACCACCACTA---------CAGCAA-GAGTTGAGAA--AC-G-------G----GTAAATAATATTTCGGAAATT-AGGGTTTACATACAA
gi|26 : tgcaattttacgtggcgagctctacaaccatagggtcaccgctatcctacatgT--AAT-AAGTAT--CTTT---TAAGATTCACAAGAGTTAATGGG-TTGGCAAAAGTGTCTTATGAGACAGTTTGTAGATGGAAAAAAGGAAT---TTGA---TTCTGGTGTAGtttagt
gi|27 : tctattgttctaccattcataGGGATTTCAGAGTAATAGTCGTTT-CAATA------TAGGCA-G
gi|3 : GGTGTTCGAAATATATTGCGTATTTATAAGTT--GT-----------GCAAAATTCACATGAAATTTGACATCA--------------ATA------TTTACATGAATG-----GA-TAGCTCTAT-TCAATATTTACAAAATGGTAAA--T---------------------A--T--G--TATCTGCTGAAATACAGGATTCTAGAGTTATAGTCATTT-CAATA------CAGGAA-GTTGTT-----GACCACTGTTG---------TAAAAA-TGGTTGAGAA--A----------G--CAGCAAATAATG---AGAAAATT-CTGGCTTGTAT-CAAA--GTTTGTACT--AAACT-TGG-TTGGTCTCT--AAA-AGATAT--TTTT-AATGAAAT-CACATGGGTTTATGGG-TTGACCAATGTGTCTTATGAGACAGTATGTAGATGG-CAAAAAAAAT---ATGA---TTCTGGTG---------------------A----T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATTGTGTCTAAAATTAGAGAAATGGTTCAAAGTGATGCGCAAT-ATAATGTGCATGATATAGCA-GCATTGCAGGCATTTCACT---ATCTGCAGTTCATTTCGTTTTGAGAAAAATCATGGAA
gi|4 : TATTGTGTATTTATAAGTC--GA-----------GCAAAATTCACGTGCAGTTTTACTTCG--------------ATG------TTTGTGCGCATG-----AA-TAGCTCTAT-TCAATACCTACGCAATGGTATA--T---------------------ACAT--G--TATCTGCTAAAATAAAGGATGCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACTACTTTTG---------TCAAAA-TAG-----AA--A--C-------GAATAGTAAATAATG---AAGAAATA-CGGTTTTATAT-AAAA--GTTCGTACT--AAACT-CGG-TTATTCCCT--AAATATATAT--TTTT-GATGAAAT-CACACGGGTTTATGAG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGTAAT---TTGA---TTCAGGTGT--AGT----CTG--TTAAA-A----T-GCAG-CAGA-AT-CTGATCAGCC-AGGACTGCAG-CATGTAAGAA--A-ATTGAGTCTAAAATTATAGAAAGTATTTGAAATG-TACGCGAT-ATGATGTGAGTGCTATAGTACGCATTGCAGCCGTTTCACT---ATCTTCAATTCATTTCGTTCTTAGAAAAAT-ATGGAAcgaa
gi|5 : TGTTCAAAATGTATTGTACATTTATAAGTCCTGCAAATATTCAGGGCAAAATTTATGTGTAATTTTACATTG--------------AAA------TTTATACGCATG-----TG-TAGCTCTAT-TCAATACCAACACAATG-----------------------------------G--TAT--------ACA---------------ATAGTTATTT-CAATA------TAGGCA-ATCGTT-----GACCACTGTAG---------TAAAAA-TGGTTGGGAA--ATGA-------G--TAGCAAACAATT---AGGAAATT-CGGATTTATAT-CAAA--GTTCAAACT--AAACT-TGG-TTGTTGTCT--AAA-AGGTAT--TTTT-TATGAAAT-CACACGGGTTTATGGG-TTGAAGAAAGTGTCTTATGAGACAGTTCAAAGATGG-AAAAATAAAT---TTGA---TTCTGGTGCAGAGT----CTGT-T-----AAAACT-GCAG-CAAA-AT-CTGGTCCACCAAAGACAGCAA-CATGTAAG-A--A-ACCATGTCTAAAATAAGAGAAATTGTTTGAAATGATGCGCGAT-ATAATTTGCATGATATAGCATGAATCACAGGCATTTCACT---ATCTTCAGTTCATTTCATTCTGACAAAAATCAGGAAAatt
gi|6 : GGTGTTCGAAATGTATTGTGTTTTAATAAGTT--GC-----------ACAAAATTCACGTGGAATTTAACATCG--------------ATT------TTTATTCGAATGAATAGGA-TAGCTCTAT-TCAATACCTCCACAATGGTATA--T---------------------ACAT--G--TATCTGCTGAAACACGTGATACCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TACAAA-TGTTTGGGGA--ACCA-------G--TAACACATAATG---A---------GGACTCATAT-GAAA--ATTCGTACT--AAACT-CTG-TTGTTATCT--AAA-ATATAG--ATTT-GATGAAAT-CACAT-------------------AAGTGTCTGAAGAGGCAGTTCGTAGAT-G-AAAAAGAAA------AAACGTTCTTGTGTATTGT----C-AGCT-----AAAACT-GCAG-CAAA-AT-C------ACCAAAGACAGCCA-CTTGTAAGAA--A-ATGGCGTCTAAAATAAGAGAAATT----GAGATGATGTGTGAC-ATAATA---GTGATATAGCACGCATTGCAGCCGTTTCACTTCCATCTTTTTTCCATTTCGTTTTGA-ATTAATTACGAAAt
gi|7 : agaGCATT-----GA-AAGCGCTAT-TTAATACCTACAGACTGGTATA--C---------------------AAAT--G--TATCTGCTGAAACAAGGGAATTCAAAGTTATAGTCATTT-CATTAAACTATTAGGCA-GTTGCT-----GACCACTGTTT---------TAAAA--TGGCTAGGAA--GCGA-------G--TAGCAAATAACG---AGAAAATT-CGGATTAATAC-CAAA--GTTCGTACT--------CGG-TTGTTTTCTTTAAA-ATATAT--TGT--GCTGAAAT-CACAAGGGGTTTTGGGGTTGACAAAAGTGTCTTATGAGACAGTTCGTAGATGG-GAAATTAA-T---TCGA---TTCTG-T-TAAA-----------------A----T-GTAGACAAATATTCTGGTCGGCCTAAGACTACAA-CATGTAAGAA--A-GTCGGGTCTTAAATTAGAGCAATTGTTCGAAATGATACGTAAC-ATAATGTTCGTGACATAGCATGCAATACTGTCGTTTTACT---ATCTTCAGTTGA-TTCGTTCTGTGAAAAgta
gi|8 : ctgtcctcataacgcatgtactgtcatcataatgtaagttctaggTGTTCAAAATGTATTGTGTATTTATTAGTG--GC-----------ACAAAATTAAAGTGAAATTTTACATCA--------------ATA------TTTATATGTATG-----GG-TAGCTCTTT-TTAATACTTACACAATGGTATA--TAG-------------------A--T--C--TATCTGCTGAAACACTGGATTCCAGAGTTGTAGTTA-TT-CAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAAA-TGGTTGGGAA--ACTA-------A--TA-CAAA----G---AGGAAATT-TTGACTTATAT-CAAA--GTTTGTACT--AAACT-CTG-TTGT--TCT--AAA-AGATAT--TTTT-GAT---AG-CA---------------------AAAGTGTCTTATGAGA-------TGGA----AAAAAGAAAT---TTGA---TTCGGGTTTAAAGT----CTG--TAAAAAA----T-GCAG-TGAA-AT-CTTGTCGGCCAAAGACAGTAA-CATGT---------------------ATTAGA-AAATTGTTGGAAATGATACGCAAT-ATAATATGCGTAATATAGCATGAATCACAGGCGTTTCACT---ATCTTCAGTTCATTTTATTCTTAGAAAAATCACGGAA
gi|9 : ggaaGGTGTTCGAA-TGTATTATGTATTTATAAGTC--GT-----------GCAACATTCACTTGGAATTATACATCA--------------ATA------TTTATAAACATG-----GA-TAGCT-TATATCGATACCTACACAATGGTATA--A---------------------A--C--A--TGTC-GTTGAg
gi|9 : gTA------TAAACATGTCGTT-----GACCATTGTTG---------TAAAAA-TGGTTG-----------------------CAGAC----------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGG-TTGTTCGCT--AAA-ATATATATTTTT-TTTGAAAT-TACACGAGTTTAATGG-TTGACAAAAGTGTCTGATGAGAGAGTTCGTAGATTG-TCAAATAAAT---TTGA---ATCGTGTGTAGAGT----CAG--TTAGAAA----T-GCAA-TAAA-AT-CTGTTCAGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATTAGA--AATTGTTCGAAATTATGCG--AT-ATAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATTATGAAAccattgttgtaaaaatggttgcagaccagacttatatcaaaattcgtactaaactcggttgttcgctaaaatatatattttttttgaaattacacgagtttaatggttgacaaaagtgtctgatgagagagttcgtagattgtcaaataaatttgaatcgtgtgtagagtcagttagaaatgcaataaaatctgttcagccaaaaacagcaacatgtaagaaattcgtgtctaaaattagaaattgttcgaaattatgcgatataatgtgcgtgatatagcacgcattgcaggcgtttcactgtcttcagttcatttcgttctgagaaaaattatgaaag
Alignments
lowQualScore : 11111111111 11111111111111 333333333333333333333333333
lowQualScore : 33 11111111111 44444444444444 777777 55555 2 2 33 999999999999999999999999999 33 2 555555 1 44444 777777777 2 0 666666 333 2 1 2 33 33 2 2 33 2 1 33 55 2 0 2 2 333 555 2 33 2 4 2 2 6 8 2 2 2 2 2 33 55 11 1 1 0 1 2 444
lowQualScore : .. ........... .............. ...... ..... . . .. ........................... .. . ...... . ..... ......... . . ...... ... . . . .. .. . . .. . . .. .. . . . . ... ... . .. . . . . . . . . . . . .. .. .. . . . . . ...
lowQualScore : 44 99999999999 77777777777777 222222 99999 4 4 11 777777777777777777777777777 11 1 888888 9 88888 666666666 0 1 111111 999 4 5 2 22 22 4 4 11 2 8 22 11 4 7 2 2 777 888 2 11 2 4 2 2 7 9 2 2 2 2 4 22 44 88 3 6 3 8 5 777
consensus : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
Reference ( family-406 ) : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|1 : GTGTTCGAAATGTATTGTGTATTTATAAGT-----------------------TCACGGGAAATTTTACATTG--------------ATA------TTTATACGCATG------A-TAGCTCTGT-CCAATACCTAATCAATGGTATA--A---------------------A--C--AGTTATTTGCTGAAATACGGGATTTTAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----TACCACTGTTGGGAAACGGTTGGAA-ATGGTTGGGAAACGA------GTAGCTAATACTG---AGAAAATT-CGGA---A-AC-CAAACTATTT---CT--AAGCT-CGA-TTGTTCTCT--AAA-ATATAT--TTT--GATGAAAT-TACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGGCAGTTTATAAATGG-AAAAAGAAAT---TTGA---TGCTGGTGTAGAGT-CT--GT-TGG-A-A-A-T-GAAG-CAAA-AG-CTGGTTGGCCAAAGACAGCAATTATGTAAAAA--T-ACCGTGACTTAATTTAGAGAAAATGTTCGAAATAATGCAAGAAA-TAATTTGCGTGAGAAAGCACACATTGCAGACGTGTCATT---ATCTTCAGGTAATTTCGTTCTAAGAAAAATCATGAAA
gi|10 : cgaggaTGTCCGAAATGAACTATGTATTTATAAGTC--CC-----------GCAAAATTTACGTGGCATCTTACATCG--------------GTA------TCTATACGCATG-----GA-TAGCTC--------------CATAATGGTATA--T---------------------A--TATG--TATCTGCTTGAACACGGGATTCCACAGTTATTGTAATTT-CAATA------TAGGCA-GTAGTTTCCTTGACCACTGTTG---------TAAAAAATGGTTGGAAAACGA------ATAGCAACTAATG---ATGAAATT-CGGACTTATAT-CAAA--GCTTGTACT--GAATT-CTG-TTGTACTCT--AAA-ACATAT--ATTT-CATGAAAT-CACACGGGTTAATAAG-TTGACGAAAA----TTA---------TCGTATATGG-AAAATGGAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-AGA-T-GCAG-CAAA-AT-CAGGTTTTCCAAATAGAGCAA-TATGTAAGAA--A---------TAAAATTAGAGAAATTGTTCGAAATGATACGCGATA-TAGTATGCGTgt
gi|11 : GGTGT-CAAAATGTATTGTGTATTTATAAGTC--GC-----------ACAGAATTCACTTGAAATTTTACATCT--------------ATA------TTTATACGCATG-----GA-TACCTCTAC-TCAATACCTACACAATGGTATA--TAC-------------------A--T--G--CATCTGCTGGAACACGGGGTCCCA-AATTATAGTTACTT-CTATA------TGGGCA-ATCGTT-----GACCACTAATG---------TAAAA-ATG--TGGGAAACAA------GTGGCAAATAATT---AGGAAATT-CGCACTAATGT-CAAA--GTTCGTCCTAAAAACT-CGA-CTGTTCTCT--AAA-CAATAA--ATTT-GGTGAAAT-CACA-------------------AAAGTGTTTTATGAGGCGAACTGCAAAAAA-AAAAAGAAAT---TTGA---TTTTGGTGTAGAGT-CT--GT-TAA-A-A-A-A-GCAG-CAAA-AT-C------ACCATAGACAGCAA-CATGTAAAAA--ATGTGATGTCGAAAATTAGAAA
gi|12 : gaggGTT-----GATCACTGTTA---------TAAAA-ACAGTTGGAAAACGA------GTTGAAAATATTA---AAGAAATTACAG-CTAGTAC-TAAA--GTTTAAGCG--AAACT-AGG---GCTTTCC--AA-------T--TTTT--ACAGAAT-TGGGCAAGTTTATAGG-TATTCTGAGGTCTCTTTTTA------TTGTAGGCAG-AAGGATAAAT---TTGA---TACATGTGTAGAG---T--GT-T-A-A-AGA-T-GCTG-GAAA-AG-CTGGGCAGCCAGTGACTGCAA-C-TGCAACAGGTA-AT-GTCTCAAAAAGTAAAAATATTATTAGAAACGATGGTAGATA-TACTTTTCGCAATATTGC
gi|13 : tatatgcatggatcactagttcaatacagctttaaaatcattctcaTGTTCGAAATATATTGTGTATTTATAAGTT--GT-----------GCAAAATTCACGTGAAAGTTTGCATCG--------------ATACATGTATTTATACGCATG-----GA-TAACTCTAT-TCAATATCTACACAATGGAATA--TGC-------------------A--T--G--TATCTGCTGAAACACGAGATTCCAGAGTAATTGTTATTT-CAATA------TAAGCA-GTCGTT-----AACCA---TTT---------TAACA-----TTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-AGGACTTGTAT-AAAG--GTT-GTACT--AAACT-CGC-TTGTTCTCT--TAA-AGATAT--TTTT-TATAAACT-CACACGGTTTAATGGG-TTGAAGAAAGCGTCTTATGAGACAGTAAGTAGATGG-AAACAGAAAT---TTGA---TTCTGG----AAGT-C----T-T-A-A-A-A-T-ACAG-CAAA-AT-CTGtttaactgccaacatattgcttttgagagtacatttcatt
gi|14 : -GTCGTT-----AACCATTGTTG---------TAAAA-ATGGTTGG-AGAC---------------------------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGGGTTGTTCGCT--AAA-TTATAT--TTTT-GATGAAAT-CACACGGGTTTAATGG-TTGACGAAAGTGTCTTATGAGAGAGTTCGTCGATTG-AAAAAAAAATAAATTAAA--GTCTGTTGAAGAGT-CT--GT-T-A-G-A-ACT-GCAA-CAAA-AA---GTTCGGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATCAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGTGTGATATAGCACGCATTGAAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|15 : atacat-CAAA--GTTCGTAAT--AAACT-CAG-TTGTACTTT--GAA-ACGTAT--TTCT-GACGAAAT-CACACGGAATTATGGG-ACGACGAAAGTG-CTTATGAGACAGTTCGTTGCTGG-AAAAATAAAT---TTGA---TTCTGGTGTAG--T-CT--GT-T-A-A-A-AAT-GCAG-TAAA-AT-CTGGTCGGTCAAAGACAGCAA-CATGTACGAA--A-TTTTCATTTAAA-TTAGACAA-TTTTTGGATATAATGCAAGATG-TAATGTTTGTGATATAACACGCATTGCAGGCGTTTCACA---ATCTTCAGTTAATTTCGTCATGATAAAAATCATGAAAgt
gi|16 : TATTTATAAATC--TC-----------GCAAAATTCACTAGAAATTTTACATCG--------------ATA------TTTATACAAACG-----GA-TAGTTCTAT-TCAAAACCTTCACCGTGGTATA--T---------------------ACAT--G--TATCTGCTGTAACACTGGATTCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTGCGGAAAGGA------GTAGCAAATAAacta
gi|16 : attacctacactcagagactttgaaaaagcaccactTTCACT---AGT---AGTTCATTCCATTCTGAGAAAAATTATGAAaaaaatggtcgaaatgattcactagtagttcattccattctgagaaaaattatgaa
gi|17 : attacctacactcagagactttgaaaaagcaccacttatttataaatctcgcaaaattcactagaaattttacatcgatatttatacaaacggatagttctattcaaaaccttcaccgtggtatatacatgtatctgctgtaacactggattccagagttatagtcattttaatataggcagtcgttgaccactgttgtaaaaatggtgcggaaaggagtagcaaataaaaaaatggtcgaaatgaGAGTTTCGGGG-TTGAAGAAAGTGTCTCATGAGACAGTTCGTAGCTAA-AAAAAGAA-T---TTGA---TT-TGGTATAGAGT-CT--GT-T-A-A-A-A-TTGCAG-GAAA-GT-ATTTTCGGCCAAAGACTGCAA-CATGTAAGAA--A-ATCGTGTCTTAAATTAGAGGCATTGTTCAAATTGACCCTTGACAATAA---GTGTGACATAGTAGGCATTGCAGGCGTTTTACT---ATCTTCATTTGAAATCGTTCTGAGAAAAATTATGAAA
gi|18 : GG-TAGACGAAAGTGTCTTATGAGACAGTTCGCAGATGG-AAAAAGAAAT---TTGA---CTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-TT-CTGGTCGGCCAAAGACAGCAA-CATGTAA-AA--A-ACCGTGTTT-AAACTA-AGAAA-TGTTCGAAATTATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGTGTTTCACT---ATCTTCATTTTATTTCGTTCTCAGAAAAATCATGAAA
gi|19 : AT---TTGA---TTCTGGAGTAAAGTACTATGT-T-A-A-ACA-T-GCAA-TAAA-AT-CTGGTCGTCCAAAGACAGCAG-CATGTAGGCA--A-ATCATGTCTAGAATTAGAATAAATGTTCAAAATGATGAATTATA-TAATGTGCGTGATATAGCACGCATTGCAGTCGTTTCACT---GTATTCAGTTCATTGCGTTT----AGAAATCA-GAAAgttag
gi|2 : cttataaacagtcggaacgtgtaaaaaattcagcatagttgTAAATC--GT-----------GCAAACTTCACGTGAAATTTTACATCGGTATATATATATATATA------TATATATGCAAG-----GA-TAGCTCTAT-CTAATACCTACATAATGGTATA--TACATGTATCGCATAAGTCTACA--T--A--TATATGCTGTAACACAGGAGTCCAGAGTTGTAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TTATT-ATGATTGCGAAACGA------GTAGCAAAAAATG---AGGAAATT-C----TTAAAT--GAA--GTTCGTACA--AAACT-CGG-TTATTCTCT--AAA-AGATAT--TTCT-GATGAAAT-CACACGGGTTTATTGG-TTAACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TGCTAGTGAAGAGT-CT--GT-T-A-ATA-A-T-GCTG-CAAA-AT-CTGGTCGGCCAAAGAAAGCAA-CATGTAAGG-------C---------ATT----------TTCGAAATGATGTACGTGG-TAATGTGCGTGATACAGCACGCTTTGCAGGCTTTTAACT---ATCTTCAACTCATTTCGTTCTGAGAGAAATCATGAAAattt
gi|20 : gtttggGGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCATGTGAAATTTTACATTG--------------AT-------TTAATTCGCATT-----GATTAGCT-TAT-TCAATA-CTACACACTAGTGTA--T---------------------A--CAAG--AATTTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CATTA------TTGGCA-TTAGTT-----GATCACCGTTG---------TAAgttagga
gi|20 : ggACTTATAT-CAAA--ATTCGTACT--AAAATATGG-CTTTTGTCT--AAA-Acttatatcaaaattcgtactaaaatatggcttttgtctaaaa
gi|21 : ggggtgttcgaaatgtattgtgtatttataagtcgcgcaaaattcatgtgaaattttacattgatttaattcgcattgattagcttattcaatactacacactagtgtatacaagaatttgctgaaacacgggattccagagttatagtcatttcattattggcattagttgatcaccgttgtaGTTCGAAATATATTATGTACTCATAAGTC--GC-----------TCAAAATTCACGTGAAATTTTATATCG--------------ATA------TTTATACG----------A-CAGCTCTAT-TCAATACTTACACAATGGTATA--TGC-------------------A--T--G--TATCTGTTAAAACACGTGATTCAAGAGTTATAGT-ATTTACAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAA
gi|22 : cgGGTGTTTGAAGTGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATT------------------------TTTATACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATATAT---------------------A--T--G--TATCTGCTGAAACACGGGGTTCAGGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTC-----GACCACTGTTG---------T-AGA-ATGGGTGG-------------------AATAATG---CGGAAATT-CGG
gi|23 : aTACA--C---------------------A--T--G--TATCTGCTGAAACACGGGATTCAAGAGTTATAGCCATTT-CAACA------TAGGCA-GTCGTT-----GACCACTCTTG---------TAAAC-ATGGTAAGGAAACGAGTGCATGTAGCAAATAATG---AGGAA----CGG--TT-----------GTTC---------------------TCT----AAA-GTATAT--TTTTGGATGGAAT-CAC
gi|24 : caatcggacgagtttccttactgtcactcctaGGTGTTAGAAATGTATTGTGTATTTATAAA--------------------------ACGTGAAATCTTACATCG--------------ATA------TATGTACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATA--T---------------------ACAT--G--TATCTGCAAAAACACGGGATTCCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GCCGTC-----GACCACTATTG---------TAAAA-
gi|25 : aggATATTCATTA-AAATA------TAGCCA-GTCGTT-----GACCACCACTA---------CAGCA-AGAGTTGAGAAACGG------GT---AAATAATATTTCGGAAATT-AGGGTTTACATACAA
gi|26 : tgcaattttacgtggcgagctctacaaccatagggtcaccgctatcctacatgT--AAT-AAGTAT--CTTT---TAAGATTCACAAGAGTTAATGGG-TTGGCAAAAGTGTCTTATGAGACAGTTTGTAGATGGAAAAAAGGAAT---TTGA---TTCTGGTGTAGtttagt
gi|27 : tctattgttctaccattcataGGGATTTCAGAGTAATAGTCGTTT-CAATA------TAGGCA-G
gi|3 : GGTGTTCGAAATATATTGCGTATTTATAAGTT--GT-----------GCAAAATTCACATGAAATTTGACATCA--------------ATA------TTTACATGAATG-----GA-TAGCTCTAT-TCAATATTTACAAAATGGTAAA--T---------------------A--T--G--TATCTGCTGAAATACAGGATTCTAGAGTTATAGTCATTT-CAATA------CAGGAA-GTTGTT-----GACCACTGTTG---------TAAAA-ATGGTTGAGAA---A------GCAGCAAATAATG---AGAAAATT-CTGGCTTGTAT-CAAA--GTTTGTACT--AAACT-TGG-TTGGTCTCT--AAA-AGATAT--TTTT-AATGAAAT-CACATGGGTTTATGGG-TTGACCAATGTGTCTTATGAGACAGTATGTAGATGG-CAAAAAAAAT---ATGA---TTCTGGTG----------------------A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATTGTGTCTAAAATTAGAGAAATGGTTCAAAGTGATGCGCAATA-TAATGTGCATGATATAGCA-GCATTGCAGGCATTTCACT---ATCTGCAGTTCATTTCGTTTTGAGAAAAATCATGGAA
gi|4 : TATTGTGTATTTATAAGTC--GA-----------GCAAAATTCACGTGCAGTTTTACTTCG--------------ATG------TTTGTGCGCATG-----AA-TAGCTCTAT-TCAATACCTACGCAATGGTATA--T---------------------ACAT--G--TATCTGCTAAAATAAAGGATGCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACTACTTTTG---------TCAAA-ATAG-----AAACGA------ATAGTAAATAATG---AAGAAATA-CGGTTTTATAT-AAAA--GTTCGTACT--AAACT-CGG-TTATTCCCT--AAATATATAT--TTTT-GATGAAAT-CACACGGGTTTATGAG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGTAAT---TTGA---TTCAGGTGT--AGT-CT--GT-T-A-A-A-A-T-GCAG-CAGA-AT-CTGATCAGCC-AGGACTGCAG-CATGTAAGAA--A-ATTGAGTCTAAAATTATAGAAAGTATTTGAAATG-TACGCGATA-TGATGTGAGTGCTATAGTACGCATTGCAGCCGTTTCACT---ATCTTCAATTCATTTCGTTCTTAGAAAAAT-ATGGAAcgaa
gi|5 : TGTTCAAAATGTATTGTACATTTATAAGTCCTGCAAATATTCAGGGCAAAATTTATGTGTAATTTTACATTG--------------AAA------TTTATACGCATG-----TG-TAGCTCTAT-TCAATACCAACACAATG-----------------------------------G--TAT--------ACA---------------ATAGTTATTT-CAATA------TAGGCA-ATCGTT-----GACCACTGTAG---------TAAAA-ATGGTTGGGAAATGA------GTAGCAAACAATT---AGGAAATT-CGGATTTATAT-CAAA--GTTCAAACT--AAACT-TGG-TTGTTGTCT--AAA-AGGTAT--TTTT-TATGAAAT-CACACGGGTTTATGGG-TTGAAGAAAGTGTCTTATGAGACAGTTCAAAGATGG-AAAAATAAAT---TTGA---TTCTGGTGCAGAGT-CT--GT-T-A-A-A-ACT-GCAG-CAAA-AT-CTGGTCCACCAAAGACAGCAA-CATGTAAG-A--A-ACCATGTCTAAAATAAGAGAAATTGTTTGAAATGATGCGCGATA-TAATTTGCATGATATAGCATGAATCACAGGCATTTCACT---ATCTTCAGTTCATTTCATTCTGACAAAAATCAGGAAAatt
gi|6 : GGTGTTCGAAATGTATTGTGTTTTAATAAGTT--GC-----------ACAAAATTCACGTGGAATTTAACATCG--------------ATT------TTTATTCGAATGAATAGGA-TAGCTCTAT-TCAATACCTCCACAATGGTATA--T---------------------ACAT--G--TATCTGCTGAAACACGTGATACCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TACAA-ATGTTTGGGGAACCA------GTAACACATAATG---A---------GGACTCATAT-GAAA--ATTCGTACT--AAACT-CTG-TTGTTATCT--AAA-ATATAG--ATTT-GATGAAAT-CACAT-------------------AAGTGTCTGAAGAGGCAGTTCGTAGAT-G-AAAAAGAAA------AAACGTTCTTGTGTATTGT-CA--GC-T-A-A-A-ACT-GCAG-CAAA-AT-C------ACCAAAGACAGCCA-CTTGTAAGAA--A-ATGGCGTCTAAAATAAGAGAAATT----GAGATGATGTGTGACA-TAATA---GTGATATAGCACGCATTGCAGCCGTTTCACTTCCATCTTTTTTCCATTTCGTTTTGA-ATTAATTACGAAAt
gi|7 : agaGCATT-----GA-AAGCGCTAT-TTAATACCTACAGACTGGTATA--C---------------------AAAT--G--TATCTGCTGAAACAAGGGAATTCAAAGTTATAGTCATTT-CATTAAACTATTAGGCA-GTTGCT-----GACCACTGTTT---------TAAAA--TGGCTAGGAAGCGA------GTAGCAAATAACG---AGAAAATT-CGGATTAATAC-CAAA--GTTCGTACT--------CGG-TTGTTTTCTTTAAA-ATATAT--TGT--GCTGAAAT-CACAAGGGGTTTTGGGGTTGACAAAAGTGTCTTATGAGACAGTTCGTAGATGG-GAAA---------TTAA---TTC-------GATT-CT--GT-T-A-A-A-A-T-GTAGACAAATATTCTGGTCGGCCTAAGACTACAA-CATGTAAGAA--A-GTCGGGTCTTAAATTAGAGCAATTGTTCGAAATGATACGTAACA-TAATGTTCGTGACATAGCATGCAATACTGTCGTTTTACT---ATCTTCAGTTGA-TTCGTTCTGTGAAAAgta
gi|8 : ctgtcctcataacgcatgtactgtcatcataatgtaagttctaggTGTTCAAAATGTATTGTGTATTTATTAGTG--GC-----------ACAAAATTAAAGTGAAATTTTACATCA--------------ATA------TTTATATGTATG-----GG-TAGCTCTTT-TTAATACTTACACAATGGTATA--TAG-------------------A--T--C--TATCTGCTGAAACACTGGATTCCAGAGTTGTAGTTA-TT-CAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACTA------ATA-CAAA----G---AGGAAATT-TTGACTTATAT-CAAA--GTTTGTACT--AAACT-CTG-TTGT--TCT--AAA-AGATAT--TTTT-GAT---AG-CA---------------------AAAGTGTCTTATGAGA-------TGGA----AAAAAGAAAT---TTGA---TTCGGGTTTAAAGT-CT--GTAA-A-A-A-A-T-GCAG-TGAA-AT-CTTGTCGGCCAAAGACAGTAA-CATGT---------------------ATTAGA-AAATTGTTGGAAATGATACGCAATA-TAATATGCGTAATATAGCATGAATCACAGGCGTTTCACT---ATCTTCAGTTCATTTTATTCTTAGAAAAATCACGGAA
gi|9 : ggaaGGTGTTCGAA-TGTATTATGTATTTATAAGTC--GT-----------GCAACATTCACTTGGAATTATACATCA--------------ATA------TTTATAAACATG-----GA-TAGCT-TATATCGATACCTACACAATGGTATA--A---------------------A--C--A--TGTC-GTTGAg
gi|9 : gTA------TAAACATGTCGTT-----GACCATTGTTG---------TAAAA-ATGGTTG------------------CAGAC----------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGG-TTGTTCGCT--AAA-ATATATATTTTT-TTTGAAAT-TACACGAGTTTAATGG-TTGACAAAAGTGTCTGATGAGAGAGTTCGTAGATTG-TCAAATAAAT---TTGA---ATCGTGTGTAGAGT-CA--GT-T-AGA-A-A-T-GCAA-TAAA-AT-CTGTTCAGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATTAGA--AATTGTTCGAAATTATGCG--ATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATTATGAAAccattgttgtaaaaatggttgcagaccagacttatatcaaaattcgtactaaactcggttgttcgctaaaatatatattttttttgaaattacacgagtttaatggttgacaaaagtgtctgatgagagagttcgtagattgtcaaataaatttgaatcgtgtgtagagtcagttagaaatgcaataaaatctgttcagccaaaaacagcaacatgtaagaaattcgtgtctaaaattagaaattgttcgaaattatgcgatataatgtgcgtgatatagcacgcattgcaggcgtttcactgtcttcagttcatttcgttctgagaaaaattatgaaag
Alignments
lowQualScore : 11111111111 11111111111111 333333333333333333333333333
lowQualScore : 33 11111111111 44444444444444 777777 55555 2 2 33 999999999999999999999999999 33 2 555555 1 44444 777777777 2 0 666666 333 2 1 2 33 33 2 2 33 2 1 33 55 2 0 2 2 333 555 2 33 2 4 2 2 6 8 2 2 2 2 2 33 55 11 1 1 0 1 2 444
lowQualScore : .. ........... .............. ...... ..... . . .. ........................... .. . ...... . ..... ......... . . ...... ... . . . .. .. . . .. . . .. .. . . . . ... ... . .. . . . . . . . . . . . .. .. .. . . . . . ...
lowQualScore : 44 99999999999 77777777777777 222222 99999 4 4 11 777777777777777777777777777 11 1 888888 9 88888 666666666 0 1 111111 999 4 5 2 22 22 4 4 11 2 8 22 11 4 7 2 2 777 888 2 11 2 4 2 2 7 9 2 2 2 2 4 22 44 88 3 6 3 8 5 777
consensus : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
Reference ( family-406 ) : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|1 : GTGTTCGAAATGTATTGTGTATTTATAAGT-----------------------TCACGGGAAATTTTACATTG--------------ATA------TTTATACGCATG------A-TAGCTCTGT-CCAATACCTAATCAATGGTATA--A---------------------A--C--AGTTATTTGCTGAAATACGGGATTTTAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----TACCACTGTTGGGAAACGGTTGGAA-ATGGTTGGGAAACGA------GTAGCTAATACTG---AGAAAATT-CGGA---A-AC-CAAACTATTT---CT--AAGCT-CGA-TTGTTCTCT--AAA-ATATAT--TTT--GATGAAAT-TACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGGCAGTTTATAAATGG-AAAAAGAAAT---TTGA---TGCTGGTGTAGAGT-CT--GT-TGG-A-A-A-T-GAAG-CAAA-AG-CTGGTTGGCCAAAGACAGCAATTATGTAAAAA--T-ACCGTGACTTAATTTAGAGAAAATGTTCGAAATAATGCAAGAAA-TAATTTGCGTGAGAAAGCACACATTGCAGACGTGTCATT---ATCTTCAGGTAATTTCGTTCTAAGAAAAATCATGAAA
gi|10 : cgaggaTGTCCGAAATGAACTATGTATTTATAAGTC--CC-----------GCAAAATTTACGTGGCATCTTACATCG--------------GTA------TCTATACGCATG-----GA-TAGCTC--------------CATAATGGTATA--T---------------------A--TATG--TATCTGCTTGAACACGGGATTCCACAGTTATTGTAATTT-CAATA------TAGGCA-GTAGTTTCCTTGACCACTGTTG---------TAAAAAATGGTTGGAAAACGA------ATAGCAACTAATG---ATGAAATT-CGGACTTATAT-CAAA--GCTTGTACT--GAATT-CTG-TTGTACTCT--AAA-ACATAT--ATTT-CATGAAAT-CACACGGGTTAATAAG-TTGACGAAAA----TTA---------TCGTATATGG-AAAATGGAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-AGA-T-GCAG-CAAA-AT-CAGGTTTTCCAAATAGAGCAA-TATGTAAGAA--A---------TAAAATTAGAGAAATTGTTCGAAATGATACGCGATA-TAGTATGCGTgt
gi|11 : GGTGT-CAAAATGTATTGTGTATTTATAAGTC--GC-----------ACAGAATTCACTTGAAATTTTACATCT--------------ATA------TTTATACGCATG-----GA-TACCTCTAC-TCAATACCTACACAATGGTATA--TAC-------------------A--T--G--CATCTGCTGGAACACGGGGTCCCA-AATTATAGTTACTT-CTATA------TGGGCA-ATCGTT-----GACCACTAATG---------TAAAA-ATG--TGGGAAACAA------GTGGCAAATAATT---AGGAAATT-CGCACTAATGT-CAAA--GTTCGTCCTAAAAACT-CGA-CTGTTCTCT--AAA-CAATAA--ATTT-GGTGAAAT-CACA-------------------AAAGTGTTTTATGAGGCGAACTGCAAAAAA-AAAAAGAAAT---TTGA---TTTTGGTGTAGAGT-CT--GT-TAA-A-A-A-A-GCAG-CAAA-AT-C------ACCATAGACAGCAA-CATGTAAAAA--ATGTGATGTCGAAAATTAGAAA
gi|12 : gaggGTT-----GATCACTGTTA---------TAAAA-ACAGTTGGAAAACGA------GTTGAAAATATTA---AAGAAATTACAG-CTAGTAC-TAAA--GTTTAAGCG--AAACT-AGG---GCTTTCC--AA-------T--TTTT--ACAGAAT-TGGGCAAGTTTATAGG-TATTCTGAGGTCTCTTTTTA------TTGTAGGCAG-AAGGATAAAT---TTGA---TACATGTGTAGAG---T--GT-T-A-A-AGA-T-GCTG-GAAA-AG-CTGGGCAGCCAGTGACTGCAA-C-TGCAACAGGTA-AT-GTCTCAAAAAGTAAAAATATTATTAGAAACGATGGTAGATA-TACTTTTCGCAATATTGC
gi|13 : tatatgcatggatcactagttcaatacagctttaaaatcattctcaTGTTCGAAATATATTGTGTATTTATAAGTT--GT-----------GCAAAATTCACGTGAAAGTTTGCATCG--------------ATACATGTATTTATACGCATG-----GA-TAACTCTAT-TCAATATCTACACAATGGAATA--TGC-------------------A--T--G--TATCTGCTGAAACACGAGATTCCAGAGTAATTGTTATTT-CAATA------TAAGCA-GTCGTT-----AACCA---TTT---------TAACA-----TTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-AGGACTTGTAT-AAAG--GTT-GTACT--AAACT-CGC-TTGTTCTCT--TAA-AGATAT--TTTT-TATAAACT-CACACGGTTTAATGGG-TTGAAGAAAGCGTCTTATGAGACAGTAAGTAGATGG-AAACAGAAAT---TTGA---TTCTGG----AAGT-C----T-T-A-A-A-A-T-ACAG-CAAA-AT-CTGtttaactgccaacatattgcttttgagagtacatttcatt
gi|14 : -GTCGTT-----AACCATTGTTG---------TAAAA-ATGGTTGG-AGAC---------------------------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGGGTTGTTCGCT--AAA-TTATAT--TTTT-GATGAAAT-CACACGGGTTTAATGG-TTGACGAAAGTGTCTTATGAGAGAGTTCGTCGATTG-AAAAAAAAATAAATTAAA--GTCTGTTGAAGAGT-CT--GT-T-A-G-A-ACT-GCAA-CAAA-AA---GTTCGGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATCAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGTGTGATATAGCACGCATTGAAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|15 : atacat-CAAA--GTTCGTAAT--AAACT-CAG-TTGTACTTT--GAA-ACGTAT--TTCT-GACGAAAT-CACACGGAATTATGGG-ACGACGAAAGTG-CTTATGAGACAGTTCGTTGCTGG-AAAAATAAAT---TTGA---TTCTGGTGTAG--T-CT--GT-T-A-A-A-AAT-GCAG-TAAA-AT-CTGGTCGGTCAAAGACAGCAA-CATGTACGAA--A-TTTTCATTTAAA-TTAGACAA-TTTTTGGATATAATGCAAGATG-TAATGTTTGTGATATAACACGCATTGCAGGCGTTTCACA---ATCTTCAGTTAATTTCGTCATGATAAAAATCATGAAAgt
gi|16 : TATTTATAAATC--TC-----------GCAAAATTCACTAGAAATTTTACATCG--------------ATA------TTTATACAAACG-----GA-TAGTTCTAT-TCAAAACCTTCACCGTGGTATA--T---------------------ACAT--G--TATCTGCTGTAACACTGGATTCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTGCGGAAAGGA------GTAGCAAATAAacta
gi|16 : attacctacactcagagactttgaaaaagcaccactTTCACT---AGT---AGTTCATTCCATTCTGAGAAAAATTATGAAaaaaatggtcgaaatgattcactagtagttcattccattctgagaaaaattatgaa
gi|17 : attacctacactcagagactttgaaaaagcaccacttatttataaatctcgcaaaattcactagaaattttacatcgatatttatacaaacggatagttctattcaaaaccttcaccgtggtatatacatgtatctgctgtaacactggattccagagttatagtcattttaatataggcagtcgttgaccactgttgtaaaaatggtgcggaaaggagtagcaaataaaaaaatggtcgaaatgaGAGTTTCGGGG-TTGAAGAAAGTGTCTCATGAGACAGTTCGTAGCTAA-AAAAAGAA-T---TTGA---TT-TGGTATAGAGT-CT--GT-T-A-A-A-A-TTGCAG-GAAA-GT-ATTTTCGGCCAAAGACTGCAA-CATGTAAGAA--A-ATCGTGTCTTAAATTAGAGGCATTGTTCAAATTGACCCTTGACAATAA---GTGTGACATAGTAGGCATTGCAGGCGTTTTACT---ATCTTCATTTGAAATCGTTCTGAGAAAAATTATGAAA
gi|18 : GG-TAGACGAAAGTGTCTTATGAGACAGTTCGCAGATGG-AAAAAGAAAT---TTGA---CTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-TT-CTGGTCGGCCAAAGACAGCAA-CATGTAA-AA--A-ACCGTGTTT-AAACTA-AGAAA-TGTTCGAAATTATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGTGTTTCACT---ATCTTCATTTTATTTCGTTCTCAGAAAAATCATGAAA
gi|19 : AT---TTGA---TTCTGGAGTAAAGTACTATGT-T-A-A-ACA-T-GCAA-TAAA-AT-CTGGTCGTCCAAAGACAGCAG-CATGTAGGCA--A-ATCATGTCTAGAATTAGAATAAATGTTCAAAATGATGAATTATA-TAATGTGCGTGATATAGCACGCATTGCAGTCGTTTCACT---GTATTCAGTTCATTGCGTTT----AGAAATCA-GAAAgttag
gi|2 : cttataaacagtcggaacgtgtaaaaaattcagcatagttgTAAATC--GT-----------GCAAACTTCACGTGAAATTTTACATCGGTATATATATATATATA------TATATATGCAAG-----GA-TAGCTCTAT-CTAATACCTACATAATGGTATA--TACATGTATCGCATAAGTCTACA--T--A--TATATGCTGTAACACAGGAGTCCAGAGTTGTAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TTATT-ATGATTGCGAAACGA------GTAGCAAAAAATG---AGGAAATT-C----TTAAAT--GAA--GTTCGTACA--AAACT-CGG-TTATTCTCT--AAA-AGATAT--TTCT-GATGAAAT-CACACGGGTTTATTGG-TTAACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TGCTAGTGAAGAGT-CT--GT-T-A-ATA-A-T-GCTG-CAAA-AT-CTGGTCGGCCAAAGAAAGCAA-CATGTAAGG-------C---------ATT----------TTCGAAATGATGTACGTGG-TAATGTGCGTGATACAGCACGCTTTGCAGGCTTTTAACT---ATCTTCAACTCATTTCGTTCTGAGAGAAATCATGAAAattt
gi|20 : gtttggGGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCATGTGAAATTTTACATTG--------------AT-------TTAATTCGCATT-----GATTAGCT-TAT-TCAATA-CTACACACTAGTGTA--T---------------------A--CAAG--AATTTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CATTA------TTGGCA-TTAGTT-----GATCACCGTTG---------TAAgttagga
gi|20 : ggACTTATAT-CAAA--ATTCGTACT--AAAATATGG-CTTTTGTCT--AAA-Acttatatcaaaattcgtactaaaatatggcttttgtctaaaa
gi|21 : ggggtgttcgaaatgtattgtgtatttataagtcgcgcaaaattcatgtgaaattttacattgatttaattcgcattgattagcttattcaatactacacactagtgtatacaagaatttgctgaaacacgggattccagagttatagtcatttcattattggcattagttgatcaccgttgtaGTTCGAAATATATTATGTACTCATAAGTC--GC-----------TCAAAATTCACGTGAAATTTTATATCG--------------ATA------TTTATACG----------A-CAGCTCTAT-TCAATACTTACACAATGGTATA--TGC-------------------A--T--G--TATCTGTTAAAACACGTGATTCAAGAGTTATAGT-ATTTACAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAA
gi|22 : cgGGTGTTTGAAGTGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATT------------------------TTTATACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATATAT---------------------A--T--G--TATCTGCTGAAACACGGGGTTCAGGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTC-----GACCACTGTTG---------T-AGA-ATGGGTGG-------------------AATAATG---CGGAAATT-CGG
gi|23 : aTACA--C---------------------A--T--G--TATCTGCTGAAACACGGGATTCAAGAGTTATAGCCATTT-CAACA------TAGGCA-GTCGTT-----GACCACTCTTG---------TAAAC-ATGGTAAGGAAACGAGTGCATGTAGCAAATAATG---AGGAA----CGG--TT-----------GTTC---------------------TCT----AAA-GTATAT--TTTTGGATGGAAT-CAC
gi|24 : caatcggacgagtttccttactgtcactcctaGGTGTTAGAAATGTATTGTGTATTTATAAA--------------------------ACGTGAAATCTTACATCG--------------ATA------TATGTACGCATG-----GA-TAGCTCTGT-TCAATACCTACACAATGGTATA--T---------------------ACAT--G--TATCTGCAAAAACACGGGATTCCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GCCGTC-----GACCACTATTG---------TAAAA-
gi|25 : aggATATTCATTA-AAATA------TAGCCA-GTCGTT-----GACCACCACTA---------CAGCA-AGAGTTGAGAAACGG------GT---AAATAATATTTCGGAAATT-AGGGTTTACATACAA
gi|26 : tgcaattttacgtggcgagctctacaaccatagggtcaccgctatcctacatgT--AAT-AAGTAT--CTTT---TAAGATTCACAAGAGTTAATGGG-TTGGCAAAAGTGTCTTATGAGACAGTTTGTAGATGGAAAAAAGGAAT---TTGA---TTCTGGTGTAGtttagt
gi|27 : tctattgttctaccattcataGGGATTTCAGAGTAATAGTCGTTT-CAATA------TAGGCA-G
gi|3 : GGTGTTCGAAATATATTGCGTATTTATAAGTT--GT-----------GCAAAATTCACATGAAATTTGACATCA--------------ATA------TTTACATGAATG-----GA-TAGCTCTAT-TCAATATTTACAAAATGGTAAA--T---------------------A--T--G--TATCTGCTGAAATACAGGATTCTAGAGTTATAGTCATTT-CAATA------CAGGAA-GTTGTT-----GACCACTGTTG---------TAAAA-ATGGTTGAGAA---A------GCAGCAAATAATG---AGAAAATT-CTGGCTTGTAT-CAAA--GTTTGTACT--AAACT-TGG-TTGGTCTCT--AAA-AGATAT--TTTT-AATGAAAT-CACATGGGTTTATGGG-TTGACCAATGTGTCTTATGAGACAGTATGTAGATGG-CAAAAAAAAT---ATGA---TTCTGGTG----------------------A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATTGTGTCTAAAATTAGAGAAATGGTTCAAAGTGATGCGCAATA-TAATGTGCATGATATAGCA-GCATTGCAGGCATTTCACT---ATCTGCAGTTCATTTCGTTTTGAGAAAAATCATGGAA
gi|4 : TATTGTGTATTTATAAGTC--GA-----------GCAAAATTCACGTGCAGTTTTACTTCG--------------ATG------TTTGTGCGCATG-----AA-TAGCTCTAT-TCAATACCTACGCAATGGTATA--T---------------------ACAT--G--TATCTGCTAAAATAAAGGATGCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACTACTTTTG---------TCAAA-ATAG-----AAACGA------ATAGTAAATAATG---AAGAAATA-CGGTTTTATAT-AAAA--GTTCGTACT--AAACT-CGG-TTATTCCCT--AAATATATAT--TTTT-GATGAAAT-CACACGGGTTTATGAG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGTAAT---TTGA---TTCAGGTGT--AGT-CT--GT-T-A-A-A-A-T-GCAG-CAGA-AT-CTGATCAGCC-AGGACTGCAG-CATGTAAGAA--A-ATTGAGTCTAAAATTATAGAAAGTATTTGAAATG-TACGCGATA-TGATGTGAGTGCTATAGTACGCATTGCAGCCGTTTCACT---ATCTTCAATTCATTTCGTTCTTAGAAAAAT-ATGGAAcgaa
gi|5 : TGTTCAAAATGTATTGTACATTTATAAGTCCTGCAAATATTCAGGGCAAAATTTATGTGTAATTTTACATTG--------------AAA------TTTATACGCATG-----TG-TAGCTCTAT-TCAATACCAACACAATG-----------------------------------G--TAT--------ACA---------------ATAGTTATTT-CAATA------TAGGCA-ATCGTT-----GACCACTGTAG---------TAAAA-ATGGTTGGGAAATGA------GTAGCAAACAATT---AGGAAATT-CGGATTTATAT-CAAA--GTTCAAACT--AAACT-TGG-TTGTTGTCT--AAA-AGGTAT--TTTT-TATGAAAT-CACACGGGTTTATGGG-TTGAAGAAAGTGTCTTATGAGACAGTTCAAAGATGG-AAAAATAAAT---TTGA---TTCTGGTGCAGAGT-CT--GT-T-A-A-A-ACT-GCAG-CAAA-AT-CTGGTCCACCAAAGACAGCAA-CATGTAAG-A--A-ACCATGTCTAAAATAAGAGAAATTGTTTGAAATGATGCGCGATA-TAATTTGCATGATATAGCATGAATCACAGGCATTTCACT---ATCTTCAGTTCATTTCATTCTGACAAAAATCAGGAAAatt
gi|6 : GGTGTTCGAAATGTATTGTGTTTTAATAAGTT--GC-----------ACAAAATTCACGTGGAATTTAACATCG--------------ATT------TTTATTCGAATGAATAGGA-TAGCTCTAT-TCAATACCTCCACAATGGTATA--T---------------------ACAT--G--TATCTGCTGAAACACGTGATACCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TACAA-ATGTTTGGGGAACCA------GTAACACATAATG---A---------GGACTCATAT-GAAA--ATTCGTACT--AAACT-CTG-TTGTTATCT--AAA-ATATAG--ATTT-GATGAAAT-CACAT-------------------AAGTGTCTGAAGAGGCAGTTCGTAGAT-G-AAAAAGAAA------AAACGTTCTTGTGTATTGT-CA--GC-T-A-A-A-ACT-GCAG-CAAA-AT-C------ACCAAAGACAGCCA-CTTGTAAGAA--A-ATGGCGTCTAAAATAAGAGAAATT----GAGATGATGTGTGACA-TAATA---GTGATATAGCACGCATTGCAGCCGTTTCACTTCCATCTTTTTTCCATTTCGTTTTGA-ATTAATTACGAAAt
gi|7 : agaGCATT-----GA-AAGCGCTAT-TTAATACCTACAGACTGGTATA--C---------------------AAAT--G--TATCTGCTGAAACAAGGGAATTCAAAGTTATAGTCATTT-CATTAAACTATTAGGCA-GTTGCT-----GACCACTGTTT---------TAAAA--TGGCTAGGAAGCGA------GTAGCAAATAACG---AGAAAATT-CGGATTAATAC-CAAA--GTTCGTACT--------CGG-TTGTTTTCTTTAAA-ATATAT--TGT--GCTGAAAT-CACAAGGGGTTTTGGGGTTGACAAAAGTGTCTTATGAGACAGTTCGTAGATGG-GAAA---------TTAA---TTC-------GATT-CT--GT-T-A-A-A-A-T-GTAGACAAATATTCTGGTCGGCCTAAGACTACAA-CATGTAAGAA--A-GTCGGGTCTTAAATTAGAGCAATTGTTCGAAATGATACGTAACA-TAATGTTCGTGACATAGCATGCAATACTGTCGTTTTACT---ATCTTCAGTTGA-TTCGTTCTGTGAAAAgta
gi|8 : ctgtcctcataacgcatgtactgtcatcataatgtaagttctaggTGTTCAAAATGTATTGTGTATTTATTAGTG--GC-----------ACAAAATTAAAGTGAAATTTTACATCA--------------ATA------TTTATATGTATG-----GG-TAGCTCTTT-TTAATACTTACACAATGGTATA--TAG-------------------A--T--C--TATCTGCTGAAACACTGGATTCCAGAGTTGTAGTTA-TT-CAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACTA------ATA-CAAA----G---AGGAAATT-TTGACTTATAT-CAAA--GTTTGTACT--AAACT-CTG-TTGT--TCT--AAA-AGATAT--TTTT-GAT---AG-CA---------------------AAAGTGTCTTATGAGA-------TGGA----AAAAAGAAAT---TTGA---TTCGGGTTTAAAGT-CT--GTAA-A-A-A-A-T-GCAG-TGAA-AT-CTTGTCGGCCAAAGACAGTAA-CATGT---------------------ATTAGA-AAATTGTTGGAAATGATACGCAATA-TAATATGCGTAATATAGCATGAATCACAGGCGTTTCACT---ATCTTCAGTTCATTTTATTCTTAGAAAAATCACGGAA
gi|9 : ggaaGGTGTTCGAA-TGTATTATGTATTTATAAGTC--GT-----------GCAACATTCACTTGGAATTATACATCA--------------ATA------TTTATAAACATG-----GA-TAGCT-TATATCGATACCTACACAATGGTATA--A---------------------A--C--A--TGTC-GTTGAg
gi|9 : gTA------TAAACATGTCGTT-----GACCATTGTTG---------TAAAA-ATGGTTG------------------CAGAC----------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGG-TTGTTCGCT--AAA-ATATATATTTTT-TTTGAAAT-TACACGAGTTTAATGG-TTGACAAAAGTGTCTGATGAGAGAGTTCGTAGATTG-TCAAATAAAT---TTGA---ATCGTGTGTAGAGT-CA--GT-T-AGA-A-A-T-GCAA-TAAA-AT-CTGTTCAGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATTAGA--AATTGTTCGAAATTATGCG--ATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATTATGAAAccattgttgtaaaaatggttgcagaccagacttatatcaaaattcgtactaaactcggttgttcgctaaaatatatattttttttgaaattacacgagtttaatggttgacaaaagtgtctgatgagagagttcgtagattgtcaaataaatttgaatcgtgtgtagagtcagttagaaatgcaataaaatctgttcagccaaaaacagcaacatgtaagaaattcgtgtctaaaattagaaattgttcgaaattatgcgatataatgtgcgtgatatagcacgcattgcaggcgtttcactgtcttcagttcatttcgttctgagaaaaattatgaaag
blockSeqs : CT AAATATTCAGG GTATATATATATAT CATGTA AATAG T A TA ACATGTATCGCATAAGTCTACAT . A AACTAT T TCCTT . A GTGCAT TTT A A A . AA A G TT T C AT GG T G A AAA ACG A AT A A G T G C T A T T . GT TG GA A G C A TCC
blockSeqs : . . . . . . . . ATAT . . . . . . . . . . A . . . . . . . A . C . . . . A . . . . . . G A . . . . . . A CG A A A . .
blockSeqs : . . . . . . . . ACAT . . . . . . . . . . A . . . . . . . G . G . . . . . . . . . . . C C . . . . . . T TT A A C . .
blockSeqs : . . . . . . . . GCAT . . . . . . . . . . A . . . . . . . T . T . . . . . . . . . . . . C . . . . . . T CG A G A . .
blockSeqs : . . . . . . . . ACAT . . . . . . . . . . A . . . . . . . C . G . . . . . . . . . . . . . . . . . . . A CG A C T . .
blockSeqs : . . . . . . . . ACAA . . . . . . . . . . G . . . . . . . G . G . . . . . . . . . . . . . . . . . . . A CA T G C . .
blockSeqs : . . . . . . . . GCAT . . . . . . . . . . G . . . . . . . T . G . . . . . . . . . . . . . . . . . . . A TG A G T . .
blockSeqs : . . . . . . . . ACAT . . . . . . . . . . T . . . . . . . A . A . . . . . . . . . . . . . . . . . . . A TG A A C . .
blockSeqs : . . . . . . . . ACAT . . . . . . . . . . A . . . . . . . G . G . . . . . . . . . . . . . . . . . . . A CA A G C . .
blockSeqs : . . . . . . . . ACAT . . . . . . . . . . A . . . . . . . T . T . . . . . . . . . . . . . . . . . . . A GG A G C . .
blockSeqs : . . . . . . . . AAAT . . . . . . . . . . A . . . . . . . G . G . . . . . . . . . . . . . . . . . . . A CG A G C . .
blockSeqs : . . . . . . . . AGAT . . . . . . . . . . A . . . . . . . T . G . . . . . . . . . . . . . . . . . . . G CG T G T . .
blockSeqs : . . . . . . . . AT . . . . . . . . . . A . . . . . . . T . G . . . . . . . . . . . . . . . . . . . T G A G T . .
blockSeqs : . . . . . . . . AT . . . . . . . . . . . . . . . . . . G . T . . . . . . . . . . . . . . . . . . . . C . . C . .
blockSeqs : . . . . . . . . AT . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . AC . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . . .
blockSeqs : . . .
blockSeqCons : ACAT*********************** ** ********* **
originalCons : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--T---------------------A--T--G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
finalCons : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GA-TAGCTCTAT-TCAATACCTACACAATGGTATA--TACAT-----------------------G--TATCTGCTGAAACACGGGATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
Alignments
lowQualScore : 11111111111 11111111111111 1111111111111111111
lowQualScore : 33 11111111111 44444444444444 777777 55555 2 2 8888888888888888888 55555 33 2 55555 2 555555 1 44444 777777777 2 0 666666 333 2 1 22 33 33 2 2 33 2 1 33 55 2 0 2 2 333 555 2 33 2 4 2 2 6 8 2 2 2 2 2 33 55 11 1 1 0 1 2 444
lowQualScore : .. ........... .............. ...... ..... . . ................... ..... .. . ..... . ...... . ..... ......... . . ...... ... . . .. .. .. . . .. . . .. .. . . . . ... ... . .. . . . . . . . . . . . .. .. .. . . . . . ...
lowQualScore : 44 99999999999 77777777777777 222222 99999 4 4 2222222222222222222 99999 22 4 66666 1 888888 9 88888 666666666 0 1 111111 999 4 5 88 22 22 4 4 11 2 8 22 11 4 7 2 2 777 888 2 11 2 4 2 2 7 9 2 2 2 2 4 22 44 88 3 6 3 8 5 777
consensus : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GAT-AGCTCTAT-TCAATACCTACACAATGGTATATAC-------------------ATGT-----ATC--TGCTG-AAACACGG-----GATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
Reference ( family-406 ) : GGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATCG--------------ATA------TTTATACGCATG-----GAT-AGCTCTAT-TCAATACCTACACAATGGTATATAC-------------------ATGT-----ATC--TGCTG-AAACACGG-----GATTCCAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-CGGACTTATAT-CAAA--GTTCGTACT--AAACT-CGG-TTGTTCTCT--AAA-ANATAT--TTTT-GATGAAAT-CACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATCGTGTCTAAAATTAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---ATCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|1 : GTGTTCGAAATGTATTGTGTATTTATAAGT-----------------------TCACGGGAAATTTTACATTG--------------ATA------TTTATACGCATG------AT-AGCTCTGT-CCAATACCTAATCAATGGTATAAAC-------------------AGTT-----ATT--TGCTG-AAATACGG-----GATTTTAGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTT-----TACCACTGTTGGGAAACGGTTGGAA-ATGGTTGGGAAACGA------GTAGCTAATACTG---AGAAAATT-CGGA---A-AC-CAAACTATTT---CT--AAGCT-CGA-TTGTTCTCT--AAA-ATATAT--TTT--GATGAAAT-TACACGGGTTTATGGG-TTGACGAAAGTGTCTTATGAGGCAGTTTATAAATGG-AAAAAGAAAT---TTGA---TGCTGGTGTAGAGT-CT--GT-TGG-A-A-A-T-GAAG-CAAA-AG-CTGGTTGGCCAAAGACAGCAATTATGTAAAAA--T-ACCGTGACTTAATTTAGAGAAAATGTTCGAAATAATGCAAGAAA-TAATTTGCGTGAGAAAGCACACATTGCAGACGTGTCATT---ATCTTCAGGTAATTTCGTTCTAAGAAAAATCATGAAA
gi|10 : cgaggaTGTCCGAAATGAACTATGTATTTATAAGTC--CC-----------GCAAAATTTACGTGGCATCTTACATCG--------------GTA------TCTATACGCATG-----GAT-AGCTC--------------CATAATGGTATATAT-------------------ATGT-----ATC--TGCTT-GAACACGG-----GATTCCACAGTTATTGTAATTT-CAATA------TAGGCA-GTAGTTTCCTTGACCACTGTTG---------TAAAAAATGGTTGGAAAACGA------ATAGCAACTAATG---ATGAAATT-CGGACTTATAT-CAAA--GCTTGTACT--GAATT-CTG-TTGTACTCT--AAA-ACATAT--ATTT-CATGAAAT-CACACGGGTTAATAAG-TTGACGAAAA----TTA---------TCGTATATGG-AAAATGGAAT---TTGA---TTCTGGTGTAGAGT-CT--GT-T-A-A-AGA-T-GCAG-CAAA-AT-CAGGTTTTCCAAATAGAGCAA-TATGTAAGAA--A---------TAAAATTAGAGAAATTGTTCGAAATGATACGCGATA-TAGTATGCGTgt
gi|11 : GGTGT-CAAAATGTATTGTGTATTTATAAGTC--GC-----------ACAGAATTCACTTGAAATTTTACATCT--------------ATA------TTTATACGCATG-----GAT-ACCTCTAC-TCAATACCTACACAATGGTATATAC-------------------ATGC-----ATC--TGCTG-GAACACGG-----GGTCCCA-AATTATAGTTACTT-CTATA------TGGGCA-ATCGTT-----GACCACTAATG---------TAAAA-ATG--TGGGAAACAA------GTGGCAAATAATT---AGGAAATT-CGCACTAATGT-CAAA--GTTCGTCCTAAAAACT-CGA-CTGTTCTCT--AAA-CAATAA--ATTT-GGTGAAAT-CACA-------------------AAAGTGTTTTATGAGGCGAACTGCAAAAAA-AAAAAGAAAT---TTGA---TTTTGGTGTAGAGT-CT--GT-TAA-A-A-A-A-GCAG-CAAA-AT-C------ACCATAGACAGCAA-CATGTAAAAA--ATGTGATGTCGAAAATTAGAAA
gi|12 : gaggGTT-----GATCACTGTTA---------TAAAA-ACAGTTGGAAAACGA------GTTGAAAATATTA---AAGAAATTACAG-CTAGTAC-TAAA--GTTTAAGCG--AAACT-AGG---GCTTTCC--AA-------T--TTTT--ACAGAAT-TGGGCAAGTTTATAGG-TATTCTGAGGTCTCTTTTTA------TTGTAGGCAG-AAGGATAAAT---TTGA---TACATGTGTAGAG---T--GT-T-A-A-AGA-T-GCTG-GAAA-AG-CTGGGCAGCCAGTGACTGCAA-C-TGCAACAGGTA-AT-GTCTCAAAAAGTAAAAATATTATTAGAAACGATGGTAGATA-TACTTTTCGCAATATTGC
gi|13 : tatatgcatggatcactagttcaatacagctttaaaatcattctcaTGTTCGAAATATATTGTGTATTTATAAGTT--GT-----------GCAAAATTCACGTGAAAGTTTGCATCG--------------ATACATGTATTTATACGCATG-----GAT-AACTCTAT-TCAATATCTACACAATGGAATATGC-------------------ATGT-----ATC--TGCTG-AAACACGA-----GATTCCAGAGTAATTGTTATTT-CAATA------TAAGCA-GTCGTT-----AACCA---TTT---------TAACA-----TTGGGAAACGA------GTAGCAAATAATG---AGGAAATT-AGGACTTGTAT--AAA--GGTTGTACT--AAACT-CGC-TTGTTCTCT--TAA-AGATAT--TTTT-TATAAACT-CACACGGTTTAATGGG-TTGAAGAAAGCGTCTTATGAGACAGTAAGTAGATGG-AAACAGAAAT---TTGA---TTCTGG----AAGT-C----T-T-A-A-A-A-T-ACAG-CAAA-AT-CTGtttaactgccaacatattgcttttgagagtacatttcatt
gi|14 : -GTCGTT-----AACCATTGTTG---------TAAAA-ATGGTTGG-AGAC---------------------------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGGGTTGTTCGCT--AAA-TTATAT--TTTT-GATGAAAT-CACACGGGTTTAATGG-TTGACGAAAGTGTCTTATGAGAGAGTTCGTCGATTG-AAAAAAAAATAAATTAAA--GTCTGTTGAAGAGT-CT--GT-T-A-G-A-ACT-GCAA-CAAA-AA---GTTCGGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATCAGAGAAATTGTTCGAAATGATGCGCGATA-TAATGTGTGTGATATAGCACGCATTGAAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATCATGAAA
gi|15 : atacat-CAAA--GTTCGTAAT--AAACT-CAG-TTGTACTTT--GAA-ACGTAT--TTCT-GACGAAAT-CACACGGAATTATGGG-ACGACGAAAGTG-CTTATGAGACAGTTCGTTGCTGG-AAAAATAAAT---TTGA---TTCTGGTGTAG--T-CT--GT-T-A-A-A-AAT-GCAG-TAAA-AT-CTGGTCGGTCAAAGACAGCAA-CATGTACGAA--A-TTTTCATTTAAA-TTAGACAA-TTTTTGGATATAATGCAAGATG-TAATGTTTGTGATATAACACGCATTGCAGGCGTTTCACA---ATCTTCAGTTAATTTCGTCATGATAAAAATCATGAAAgt
gi|16 : TATTTATAAATC--TC-----------GCAAAATTCACTAGAAATTTTACATCG--------------ATA------TTTATACAAACG-----GAT-AGTTCTAT-TCAAAACCTTCACCGTGGTATATAC-------------------ATGT-----ATC--TGCTG-TAACACTG-----GATTCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTGCGGAAAGGA------GTAGCAAATAAacta
gi|16 : attacctacactcagagactttgaaaaagcaccactTTCACT---AGT---AGTTCATTCCATTCTGAGAAAAATTATGAAaaaaatggtcgaaatgattcactagtagttcattccattctgagaaaaattatgaa
gi|17 : attacctacactcagagactttgaaaaagcaccacttatttataaatctcgcaaaattcactagaaattttacatcgatatttatacaaacggatagttctattcaaaaccttcaccgtggtatatacatgtatctgctgtaacactggattccagagttatagtcattttaatataggcagtcgttgaccactgttgtaaaaatggtgcggaaaggagtagcaaataaaaaaatggtcgaaatgaGAGTTTCGGGG-TTGAAGAAAGTGTCTCATGAGACAGTTCGTAGCTAA-AAAAAGAA-T---TTGA---TT-TGGTATAGAGT-CT--GT-T-A-A-A-A-TTGCAG-GAAA-GT-ATTTTCGGCCAAAGACTGCAA-CATGTAAGAA--A-ATCGTGTCTTAAATTAGAGGCATTGTTCAAATTGACCCTTGACAATAA---GTGTGACATAGTAGGCATTGCAGGCGTTTTACT---ATCTTCATTTGAAATCGTTCTGAGAAAAATTATGAAA
gi|18 : GG-TAGACGAAAGTGTCTTATGAGACAGTTCGCAGATGG-AAAAAGAAAT---TTGA---CTCTGGTGTAGAGT-CT--GT-T-A-A-A-A-T-GCAG-CAAA-TT-CTGGTCGGCCAAAGACAGCAA-CATGTAA-AA--A-ACCGTGTTT-AAACTA-AGAAA-TGTTCGAAATTATGCGCGATA-TAATGTGCGTGATATAGCACGCATTGCAGGTGTTTCACT---ATCTTCATTTTATTTCGTTCTCAGAAAAATCATGAAA
gi|19 : AT---TTGA---TTCTGGAGTAAAGTACTATGT-T-A-A-ACA-T-GCAA-TAAA-AT-CTGGTCGTCCAAAGACAGCAG-CATGTAGGCA--A-ATCATGTCTAGAATTAGAATAAATGTTCAAAATGATGAATTATA-TAATGTGCGTGATATAGCACGCATTGCAGTCGTTTCACT---GTATTCAGTTCATTGCGTTT----AGAAATCA-GAAAgttag
gi|2 : cttataaacagtcggaacgtgtaaaaaattcagcatagttgTAAATC--GT-----------GCAAACTTCACGTGAAATTTTACATCGGTATATATATATATATA------TATATATGCAAG-----GAT-AGCTCTAT-CTAATACCTACATAATGGTATATACATGTATCGCATAAGTCTACATAT-----ATA--TGCTG-TAACACAG-----GAGTCCAGAGTTGTAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TTATT-ATGATTGCGAAACGA------GTAGCAAAAAATG---AGGAAATT-C----TTAAAT--GAA--GTTCGTACA--AAACT-CGG-TTATTCTCT--AAA-AGATAT--TTCT-GATGAAAT-CACACGGGTTTATTGG-TTAACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGAAAT---TTGA---TGCTAGTGAAGAGT-CT--GT-T-A-ATA-A-T-GCTG-CAAA-AT-CTGGTCGGCCAAAGAAAGCAA-CATGTAAGG-------C---------ATT----------TTCGAAATGATGTACGTGG-TAATGTGCGTGATACAGCACGCTTTGCAGGCTTTTAACT---ATCTTCAACTCATTTCGTTCTGAGAGAAATCATGAAAattt
gi|20 : gtttggGGTGTTCGAAATGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCATGTGAAATTTTACATTG--------------AT-------TTAATTCGCATT-----GATTAGCT-TAT-TCAATAC-TACACACTAGTGTATAC-------------------AAGA-----ATT--TGCTG-AAACACGG-----GATTCCAGAGTTATAGTCATTT-CATTA------TTGGCA-TTAGTT-----GATCACCGTTG---------TAAgttagga
gi|20 : ggACTTATAT-CAAA--ATTCGTACT--AAAATATGG-CTTTTGTCT--AAA-Acttatatcaaaattcgtactaaaatatggcttttgtctaaaa
gi|21 : ggggtgttcgaaatgtattgtgtatttataagtcgcgcaaaattcatgtgaaattttacattgatttaattcgcattgattagcttattcaatactacacactagtgtatacaagaatttgctgaaacacgggattccagagttatagtcatttcattattggcattagttgatcaccgttgtaGTTCGAAATATATTATGTACTCATAAGTC--GC-----------TCAAAATTCACGTGAAATTTTATATCG--------------ATA------TTTATACG----------AC-AGCTCTAT-TCAATACTTACACAATGGTATATGC-------------------ATGT-----ATC--TGTTA-AAACACGT-----GATTCAAGAGTTATAGT-ATTTACAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACGA------GTAGCAAATAATG---AGGAAA
gi|22 : cgGGTGTTTGAAGTGTATTGTGTATTTATAAGTC--GC-----------GCAAAATTCACGTGAAATTTTACATT------------------------TTTATACGCATG-----GAT-AGCTCTGT-TCAATACCTACACAATGGTATATAT-------------------ATGT-----ATC--TGCTG-AAACACGG-----GGTTCAGGAGTTATAGTCATTT-CAATA------TAGGCA-GTCGTC-----GACCACTGTTG---------T-AGA-ATGGGTGG-------------------AATAATG---CGGAAATT-CGG
gi|23 : aTATACAC-------------------ATGT-----ATC--TGCTG-AAACACGG-----GATTCAAGAGTTATAGCCATTT-CAACA------TAGGCA-GTCGTT-----GACCACTCTTG---------TAAAC-ATGGTAAGGAAACGAGTGCATGTAGCAAATAATG---AGGAA----CGG--TT-----------GTTC---------------------TCT----AAA-GTATAT--TTTTGGATGGAAT-CAC
gi|24 : caatcggacgagtttccttactgtcactccGGTGTTAGAAATGTATTGTGTATTTATAAA--------------------------ACGTGAAATCTTACATCG--------------ATA------TATGTACGCATG-----GAT-AGCTCTGT-TCAATACCTACACAATGGTATATAC-------------------ATGT-----ATC--TGCAA-AAACACGG-----GATTCCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GCCGTC-----GACCACTATTG---------TAAAA-
gi|25 : aggATATTCATTA-AAATA------TAGCCA-GTCGTT-----GACCACCACTA---------CAGCA-AGAGTTGAGAAACGG------GT---AAATAATATTTCGGAAATT-AGGGTTTACATACAA
gi|26 : tgcaattttacgtggcgagctctacaaccatagggtcaccgctatcctacatgT--AAT-AAGTAT--CTTT---TAAGATTCACAAGAGTTAATGGG-TTGGCAAAAGTGTCTTATGAGACAGTTTGTAGATGGAAAAAAGGAAT---TTGA---TTCTGGTGTAGtttagt
gi|27 : tctattgttctaccattcataGG-----GATTTCAGAGTAATAGTCGTTT-CAATA------TAGGCA-G
gi|3 : GGTGTTCGAAATATATTGCGTATTTATAAGTT--GT-----------GCAAAATTCACATGAAATTTGACATCA--------------ATA------TTTACATGAATG-----GAT-AGCTCTAT-TCAATATTTACAAAATGGTAAATA---------------------TGT-----ATC--TGCTG-AAATACAG-----GATTCTAGAGTTATAGTCATTT-CAATA------CAGGAA-GTTGTT-----GACCACTGTTG---------TAAAA-ATGGTTGAGAAA---------GCAGCAAATAATG---AGAAAATT-CTGGCTTGTAT-CAAA--GTTTGTACT--AAACT-TGG-TTGGTCTCT--AAA-AGATAT--TTTT-AATGAAAT-CACATGGGTTTATGGG-TTGACCAATGTGTCTTATGAGACAGTATGTAGATGG-CAAAAAAAAT---ATGA---TTCTGGTG----------------------A-T-GCAG-CAAA-AT-CTGGTCGGCCAAAGACAGCAA-CATGTAAGAA--A-ATTGTGTCTAAAATTAGAGAAATGGTTCAAAGTGATGCGCAATA-TAATGTGCATGATATAGCA-GCATTGCAGGCATTTCACT---ATCTGCAGTTCATTTCGTTTTGAGAAAAATCATGGAA
gi|4 : TATTGTGTATTTATAAGTC--GA-----------GCAAAATTCACGTGCAGTTTTACTTCG--------------ATG------TTTGTGCGCATG-----AAT-AGCTCTAT-TCAATACCTACGCAATGGTATATAC-------------------ATGT-----ATC--TGCTA-AAATAAAG-----GATGCCAGAGTTATAGTCATTT-TAATA------TAGGCA-GTCGTT-----GACTACTTTTG---------TCAAA-AT-----AGAAACGA------ATAGTAAATAATG---AAGAAATA-CGGTTTTATAT-AAAA--GTTCGTACT--AAACT-CGG-TTATTCCCT--AAATATATAT--TTTT-GATGAAAT-CACACGGGTTTATGAG-TTGACGAAAGTGTCTTATGAGACAGTTCGTAGATGG-AAAAAGTAAT---TTGA---TTCAGGTGT--AGT-CT--GT-T-A-A-A-A-T-GCAG-CAGA-AT-CTGATCAGCC-AGGACTGCAG-CATGTAAGAA--A-ATTGAGTCTAAAATTATAGAAAGTATTTGAAATG-TACGCGATA-TGATGTGAGTGCTATAGTACGCATTGCAGCCGTTTCACT---ATCTTCAATTCATTTCGTTCTTAGAAAAAT-ATGGAAcgaa
gi|5 : TGTTCAAAATGTATTGTACATTTATAAGTCCTGCAAATATTCAGGGCAAAATTTATGTGTAATTTTACATTG--------------AAA------TTTATACGCATG-----TGT-AGCTCTAT-TCAATACCAACACAATGGTATACAatt
gi|5 : ATAGTTATTT-CAATA------TAGGCA-ATCGTT-----GACCACTGTAG---------TAAAA-ATGGTTGGGAAATGA------GTAGCAAACAATT---AGGAAATT-CGGATTTATAT-CAAA--GTTCAAACT--AAACT-TGG-TTGTTGTCT--AAA-AGGTAT--TTTT-TATGAAAT-CACACGGGTTTATGGG-TTGAAGAAAGTGTCTTATGAGACAGTTCAAAGATGG-AAAAATAAAT---TTGA---TTCTGGTGCAGAGT-CT--GT-T-A-A-A-ACT-GCAG-CAAA-AT-CTGGTCCACCAAAGACAGCAA-CATGTAAG-A--A-ACCATGTCTAAAATAAGAGAAATTGTTTGAAATGATGCGCGATA-TAATTTGCATGATATAGCATGAATCACAGGCATTTCACT---ATCTTCAGTTCATTTCATTCTGACAAAAATCAGGAAAatagttatttcaatataggcaatcgttgaccactgtagtaaaaatggttgggaaatgagtagcaaacaattaggaaattcggatttatatcaaagttcaaactaaacttggttgttgtctaaaaggtattttttatgaaatcacacgggtttatgggttgaagaaagtgtcttatgagacagttcaaagatggaaaaataaatttgattctggtgcagagtctgttaaaactgcagcaaaatctggtccaccaaagacagcaacatgtaagaaaccatgtctaaaataagagaaattgtttgaaatgatgcgcgatataatttgcatgatatagcatgaatcacaggcatttcactatcttcagttcatttcattctgacaaaaatcaggaaat
gi|6 : tgttcaaaatgtattgtacatttataagtcctgcaaatattcagggcaaaatttatgtgtaattttacattgaaatttatacgcatgtgtagctctattcaataccaacacaatggtatacaGGTGTTCGAAATGTATTGTGTTTTAATAAGTT--GC-----------ACAAAATTCACGTGGAATTTAACATCG--------------ATT------TTTATTCGAATGAATAGGAT-AGCTCTAT-TCAATACCTCCACAATGGTATATAC-------------------ATGT-----ATC--TGCTG-AAACACGT-----GATACCAGAGTTAAAGTCATTT-CAATA------TAGGCA-GTCGTT-----GACCACTGTTG---------TACAA-ATGTTTGGGGAACCA------GTAACACATAATG---A---------GGACTCATAT-GAAA--ATTCGTACT--AAACT-CTG-TTGTTATCT--AAA-ATATAG--ATTT-GATGAAAT-CACAT-------------------AAGTGTCTGAAGAGGCAGTTCGTAGAT-G-AAAAAGAAA------AAACGTTCTTGTGTATTGT-CA--GC-T-A-A-A-ACT-GCAG-CAAA-AT-C------ACCAAAGACAGCCA-CTTGTAAGAA--A-ATGGCGTCTAAAATAAGAGAAATT----GAGATGATGTGTGACA-TAATA---GTGATATAGCACGCATTGCAGCCGTTTCACTTCCATCTTTTTTCCATTTCGTTTTGA-ATTAATTACGAAAt
gi|7 : agaGCATT-----GAA-AGCGCTAT-TTAATACCTACAGACTGGTATACAA-------------------ATGT-----ATC--TGCTG-AAACAAGG-----GAATTCAAAGTTATAGTCATTT-CATTAAACTATTAGGCA-GTTGCT-----GACCACTGTTT---------TAAAA--TGGCTAGGAAGCGA------GTAGCAAATAACG---AGAAAATT-CGGATTAATAC-CAAA--GTTCGTACT--------CGG-TTGTTTTCTTTAAA-ATATAT--TGT--GCTGAAAT-CACAAGGGGTTTTGGGGTTGACAAAAGTGTCTTATGAGACAGTTCGTAGATGG-GAAA---------TTAA---TTC-------GATT-CT--GT-T-A-A-A-A-T-GTAGACAAATATTCTGGTCGGCCTAAGACTACAA-CATGTAAGAA--A-GTCGGGTCTTAAATTAGAGCAATTGTTCGAAATGATACGTAACA-TAATGTTCGTGACATAGCATGCAATACTGTCGTTTTACT---ATCTTCAGTTGA-TTCGTTCTGTGAAAAgta
gi|8 : ctgtcctcataacgcatgtactgtcatcataatgtaagttctaggTGTTCAAAATGTATTGTGTATTTATTAGTG--GC-----------ACAAAATTAAAGTGAAATTTTACATCA--------------ATA------TTTATATGTATG-----GGT-AGCTCTTT-TTAATACTTACACAATGGTATATAG-------------------ATCT-----ATC--TGCTG-AAACACTG-----GATTCCAGAGTTGTAGTTA-TT-CAATA------TAGACA-GTCGTT-----GACCACTGTTG---------TAAAA-ATGGTTGGGAAACTA------ATA-CAAA----G---AGGAAATT-TTGACTTATAT-CAAA--GTTTGTACT--AAACT-CTG-TTGT--TCT--AAA-AGATAT--TTTT-GAT---AG-CA---------------------AAAGTGTCTTATGAGA-------TGGA----AAAAAGAAAT---TTGA---TTCGGGTTTAAAGT-CT--GTAA-A-A-A-A-T-GCAG-TGAA-AT-CTTGTCGGCCAAAGACAGTAA-CATGT---------------------ATTAGA-AAATTGTTGGAAATGATACGCAATA-TAATATGCGTAATATAGCATGAATCACAGGCGTTTCACT---ATCTTCAGTTCATTTTATTCTTAGAAAAATCACGGAA
gi|9 : ggaaGGTGTTCGAA-TGTATTATGTATTTATAAGTC--GT-----------GCAACATTCACTTGGAATTATACATCA--------------ATA------TTTATAAACATG-----GAT-AGCT-TATATCGATACCTACACAATGGTATAAAC-------------------ATGTCGTTGACCATTGTTGTAAAAATGGTTGCAGA--CCAGACTTATA-TCAg
gi|9 : gTA------TAAACATGTCGTT-----GACCATTGTTG---------TAAAA-ATGGTTG------------------CAGAC----------------CAGACTTATAT-CAAA--ATTCGTACT--AAACT-CGG-TTGTTCGCT--AAA-ATATATATTTTT-TTTGAAAT-TACACGAGTTTAATGG-TTGACAAAAGTGTCTGATGAGAGAGTTCGTAGATTG-TCAAATAAAT---TTGA---ATCGTGTGTAGAGT-CA--GT-T-AGA-A-A-T-GCAA-TAAA-AT-CTGTTCAGCCAAAAACAGCAA-CATGTAAGAA--A-TTCGTGTCTAAAATTAGA--AATTGTTCGAAATTATGCG--ATA-TAATGTGCGTGATATAGCACGCATTGCAGGCGTTTCACT---GTCTTCAGTTCATTTCGTTCTGAGAAAAATTATGAAAaaattcgtactaaactcggttgttcgctaaaatatatattttttttgaaattacacgagtttaatggttgacaaaagtgtctgatgagagagttcgtagattgtcaaataaatttgaatcgtgtgtagagtcagttagaaatgcaataaaatctgttcagccaaaaacagcaacatgtaagaaattcgtgtctaaaattagaaattgttcgaaattatgcgatataatgtgcgtgatatagcacgcattgcaggcgtttcactgtcttcagttcatttcgttctgagaaaaattatgaaag