lowQualScore : 22222222222222222222222222222222222 111111 22222222222222222 2222222222222222222222222222222222222222222222222222222222222 1111111111111111111111111111111
lowQualScore : 1 1 66666666666666666666666666666666666 1 1 1 11 1 1 4 1 1 4 1 22222 1 22 1 33 1 1 33 55 4 1 22 222 22 222 1 1 1 1 22 33 55 1 222 22 111111 1 4 2222 88888888888888888 22 1 55555 8888888888888888 22 777777777777777777777 1 444444444 1 1111 11 1 11 2222222222222222222222222222222222222222222222222222222222222 222 3333 8888888888888888 1 1 6666666 1 2222222 11111 111 1111111111111111111111111111111 11 11 22222222 1 2222 4 444444444
lowQualScore : 6 5 7 6 6 77777777777777777777777777777777777 6 6 6 5 6 5 5 6 22 5 5 6 6 0 5 6 7 0 7 00000 6 5 11 6 5 00 5 5 22 55 0 5 77 66 4 2 444 4 55 2 6 6 33 222 7 7 6 7 7 6 11 22 55 1 8 333 66 555555 6 6 5 0 6 6 0000 6 00000000000000000 6 6 6 6 33 7 6 88 4 00000 4 2222222222222222 44 0 222222222222222222222 4 3 1 8 0 666666666 66 0 2 1 0000 7 6 88 3 7 1 88 7 9999999999999999999999999999999999999999999999999999999999999 1 333 0 6 6666 3 8 8888888888888888 3 9 2 8888888 3 3333333 7 33333 0 3 6 7 888 9999999999999999999999999999999 33 88 77777777 3 8888 9 8 1 0 111111111 6 7
lowQualScore : . . . . . ................................... . . . . . . . . .. . . . . . . . . . . ..... . . .. . . .. . . .. .. . . .. .. . . ... . .. . . . .. ... . . . . . . .. .. .. . . ... .. ...... . . . . . . .... . ................. . . . . .. . . .. . ..... . ................ .. . ..................... . . . . . ......... .. . . . .... . . .. . . . .. . ............................................................. . ... . . .... . . ................ . . . ....... . ....... . ..... . . . . ... ............................... .. .. ........ . .... . . . . ......... . .
lowQualScore : 0 0 0 0 0 00000000000000000000000000000000000 0 0 0 0 0 0 0 0 00 0 0 0 0 0 0 0 0 0 0 00000 0 0 00 0 0 00 0 0 00 00 0 0 55 55 0 5 000 0 55 5 0 0 00 000 0 0 0 0 0 0 00 00 00 5 3 333 00 000000 0 0 0 0 0 0 0000 0 00000000000000000 0 0 0 0 00 0 0 55 0 00000 0 0000000000000000 00 7 000000000000000000000 7 7 0 3 0 888888888 88 0 2 0 3333 7 7 33 3 3 0 33 7 3333333333333333333333333333333333333333333333333333333333333 0 333 7 7 0000 7 3 3333333333333333 3 7 0 7777777 3 3333333 3 77777 7 7 7 3 000 0000000000000000000000000000000 33 33 33333333 3 3333 7 3 0 0 777777777 7 7
consensus : ACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACATA-TCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGACATTGAAGATCTGTATTNNTATNCACATGCGNATAGTACNCTATTAGTACGNGTTACATTTCCATTGTTTCAATGATTGTGATGTATGAAAAGGCANGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCCATTGTTTCAATGATTGTGATGTATGAAAAGGCANGTTAATTTGT---TTGCAATGATGTT------ATTAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACANCAAATACGGCGACACNTGTCAATTTCTAACNGTTTCAATTTGGTTAACGCTGTTTANTGACAAAAATAGTTTCAAAGATA-CCAA-ATAATA-----TAATCAAANTNACAGTGTTGTAACTA-AGTTA---AGTGATATANGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATNANAGACTATTT--GCGAAT-AAACTTAAATAATAACGC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAGTT---AAATTAAATTTCACGAAGTCCTGACGGCT--TTCCGATCTGTCT----------------AGTAA-AATATCCAAACAGTGAC-----TATGT-CCTAAACTA-AATTTAAGTTCTCCCT-AATNATCTATTAAATTCN-CCCTTAAATA-CGAA--------AGA-G--TTGTTT-----ACACAAT--ACATGGC-TT-GCATG-GTTAAG----ATACTTAATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
Reference ( gi|1 ) : ATTCAAGTTTGTCATGTTAACA---GTGGC-TCTTTTC------AACTGAGT-ATG-AGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATGGGACACAACTAAACTTTACTGCGCAAATGTTTGCAGGGTGTGTATGGTCATACAATATTGAATAAGTATTGTACGTTGAAAAACTAATTCAAAAAATAAAAACGAGATAATTCATTAAAAAAACATCAATGTTTTATTCATAGAAAAACTGTATTGAAAAGTATGACATATCAACTAAATAAAGCAAATATTTTGCGCTAAATATTAACATTTACTATCCCTTTTGCAAACTTTGTGTAGACAAACACCGAATAACAGCCACAACAATAACAACAAGAGCAACCACAATGTGGGGGAAACGGTAAAGATTCGAACACGAACGCAACGTAGTGCGTCGTGTTTGGCCATGTTCGAATTTGATACTCATCCGGACAATGTTACGGTCTGTAGAATCACACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCGGACATTCCATCTCCATTTTAATACCA-TTTAAACAGCACTATCTGAAAGGCTTGTCTCTTCTTTCGGACTTCAAAGTCAGCTGCTGGGTGAAAATCCCTCTAAATGT--AAAAAAATAAA-TTAAAGAGGTATATAAACTTGATATTGAAGATCTG--TTGATATTCACATGCGGATGGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCAATCAACAAAAAGCGGCAAGTCTTTTATTTATTGTTTATAATTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAA-CCAAGTTTATTTGT---TTGCA-CAATGTTCGAAATATCAAGAACATGAAACAAACGCACAAAATTTTACTTCTTTACCAAAAAGCTAATTTGTCTTACTTAAGAAATATTTACATTTAATGTAATAATATATAAGCGTAATTTAACATGGATTGTTGATAACCGTTTTCAGACGTTTTATACATTATAACTTATAAATTAACCACTTCATTTCTAAGTTTAAATATTTTGAAGTAATTTTTTAGGTTCTTTTCATTATGTTGTCAAATTTAGTTTAATGTTGACTGTAACAGTAGTCCGCCATATTTTTTTTAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTAAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGATTGTGGTTGTATACTTAGATAAAGTTGAAGACACTAAATAATTTTATTATGTTGAAGGTCATAGACAGTAAATACGACGACACTTGT-----TTTAATTGTTTC--------TAAAA---TTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA---AGTAATCAAATTCACAGTATTGTATCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAACGGTGTTCATATCAAAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAATT---AAATTGAATTTCACAAAGTCCTGATGG-T--TTCCGATCTGACT----------------AGTAA-AATATCCAAATAGTGACT----TTTGT-CCTAAACTA-AATTTAAGTTCTACAT-AGTGATCTATTAAATTTC-CCCTTAAATA-TGAA--------AAAAAAATTCTTT-----ACATAAT--ACATGGCTTTTGCATG-GTTAAG----ATATTTTATTATC-AAAGAAAACATAA----AA---GCAAACAAGATATACTTGAT
gi|4 : ACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTT
gi|4 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACATA-TCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGTATAGTACTCTATTAGTATGCGTTACATTTCCATTGTTTCAATGATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTaaattatgtagtgcgtcgtgttttgccatgttccaatttaatactcatccaaacaatgttacgttctgtagaatcagacacttggtttaaacattttattcaattcaattttacatacatatctgatattccatctccatttttataccaatttatacagcacttttttaaagacttgtctcttattcgggactttaaaggcatgtgcttggggaaaatccctaaaaatgttaaaaaaaataaaattaaagaggtatataaaattgatattgaagatctgttgatattcacatgcgtatagtactctattagtatgcgttacatttccattgtttcaatgattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtgatcagtctaccttttatcaacaaaaagcggcacgactttaatatactgtttttaaatgttta
gi|15 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccactcaagtgtgtcttgttgatatctattgcgtgttgtcgtcgcaaacagtcacgtaatttgggtatgtaaatgtttatgattcaagttgctattggacacaactaaacttaaattTTGACATTGAAGATCTGTATTTTTATACACATGTGGATA--ACACTATTAGTACTGGTTACATTTCCATTGTTTCAATAATTGTGATGTATGAAAAGACATGTTAATTTGTta
gi|4 : aATTTCCATTGTTTCAATGATTGTAATGTATGAAAAGGCAGGTTAATTTGT---TTGCA-TGATGTgt
gi|15 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccactcaagtgtgtcttgttgatatctattgcgtgttgtcgtcgcaaacagtcacgtaatttgggtatgtaaatgtttatgattcaagttgctattggacacaactaaacttaaattatgtagtgcgtcgtgttttgccatgttccaatttaatactcatccaaacaatgttacgttctgtagaatcagacacttggtttaaacattttattcaattcaattttacatacatatctgatattccatctccatttttataccaatttatacagcacttttttaaagacttgtctcttattcgggactttaaaggcatgtgcttggggaaaatccctaaaaatgttaaaaaaaataaaattaaagaggtatataaaattgatattgaagatctgttgatattcacatgcgtatagtactctattagtatgcgttacATTTCCATTGTTTCAATAATTGTGATGTATGAAAAGACATGTTAATTTGT---gatcagtctaccttttatcaacaaaaagcggcacgactttaatatactgtttttaaatgttta
gi|3 : attgacattgaagatctgtatttttatacacatgtggataacactattagtactggttacGTTTATTTGTAGATTGCAATAATGTT------ATTAAGAACATGgt
gi|2 : aacgtgcgctaagttggtataatattcactaaaatcacactttaaaagcggtgtccataacacagactatttgcgaataacttagataaaaacgctgtccaaatatcggagaatatccaaatatatattaagttcacaaagttaaattaaatttcccgatgtactgacggctttccagtctgtcttgtaaaatatccagacagtaactatgtcctaaaaagttgttttccctcatcctctattaacttcatccttaaatactaaaaatgttttgtttgcacatacatggcttggtatggtttagatacttaatcatcaaaagaaaatataaacgcaaacaagatatactggaccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcGCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACAgcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|2 : caATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACAGCAAATACGGCGACACTTGT-----TTTAATTGTTTC--------TAAAG---TTTAA-GATAAAAATAGTTTCAAAGATAATCAAGATAA-------TAATCAAATTCAAAGTATTGTATCTT-AATTA---AATGATATATGATTCACT-AAAATCACACTTTAAAAGCGGTGTTCTTTTTATAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-TAT-------------AG--------TT-------CA-----AAATT---AAATTGAATTTCACAAAGTCCTGATGGTT--TTCCGATCTGACT----------------AGTAA-AATATCCAAACAGTGAC-----AATGT-CCTAAACTC-AAGTTAAGTTCTACAT-AGTGATCTATTAAATTTT-CCCTTAAATA-TG-------------AAAATTGTTTTGTTAACACAAT--ACATGGCTTTTGCATG-GTTAAG----ATACTTTTTTATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTTGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttttagtaagtgttcttagggattcaaattgggtacctcttatgtactgaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattctaggtaatgaatggttgtggttaaatacttagataaagttgaagacactaaataaatttattatgttgaaggtcacagacagcaaatacggcgacacttgttttaattgtttctaaagtttaagataaaaatagtttcaaagataatcaagataataatcaaattcaaagtattgtatcttaattaaatgatatatgattcactaaaatcacactttaaaagcggtgttctttttatagactctttgtgaataaacttaaataataatactttccataatatagttcaaaattaaattgaatttcacaaagtcctgatggttttccgatctgactagtaaaatatccaaacagtgacaatgtcctaaactcaagttaagttctacatagtgatctattaaattttcccttaaatatgaaaattgttttgttaacacaatacatggcttttgcatggttaagatacttttttatcaaaagaaaacataaaagcaaacaagatatacttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|5 : cagctcttttcattaggttgtcaaattagttcaatgttggccattacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGGTCACAGACACCAAATACAACAACACATGTCAATTTCTAACAGTTTTAATTTGGTTAACACTGTTTATTGACAAATAAAGTTTCAAA-----CCTATATAATATTGATTATTTAAAATGACAGTGTTACAATTACAGATATGCAGTAATATTAAATCCACTCAAAATCACACTTTAAAAGCAGTGTCCA-ATAAAATAGTATTTCAGTGAATAAAACTTAAATGTTAACACAGTATATA------------TA---ATAATGGCTGGAATCCAAAT--------TTATGTTTACAATAACAAGTTATTAAAGTAAATTT-ACAAAGTCCTGATGG-TAATTCCTATCTGTCTGAAAATTTTTCCAGCCAACAACAATATCCAAAAAGT-ATTACAATATATACCT---CTATTATTTAACATCTCTCTCAATAAT-TA--GAAGTCCACCCTTAAATACTGAATTGGTGCTAGA-------TTT-----ACACAATGCACATG--------ATGTGTTAGGACAAACAATTAATCATCAAAAGAAAACATAATTGTAAACCACAAACAA-ATATGTTAGATcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|18 : AATAGTTCCATAGATA--TAA----ATA-----TAATCAAACTTACAGGGTTGTAACTA-AGTT-----------TACGATTCACT-AAAATCACACATTGACAAttttaaaatgaacaacaggaaataatatatatacattgtgcaatatgttttcaaactataaattgctattataactaactttgcaagtttttacaatactcataaagacaatattgatctcatgatatagttcacatgtgacatctgagagaacatgtgctataattaattattatacctcaatttaagtctctaagttaaacaacccatacccgattagtcaatagtttttaat
gi|3 : CTA-AGTT-------GGTATAATATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATAACACAGACTATTT--GCGAAT-AA-CTTAGATAAAAACGC--TGTCCAAATATCGGAGAATATCCA-AAT-------------ATATATTAAGTT-------CACA---AAGTT---AAATTAAATTTCCCGATGTACTGACGGCT--TTCCAGTCTGTCT----------------TGTAA-AATATCCAGACAGTAAC-----TATGT-CCTAAA--A-AGTT---GTTTTCCCT-CATCCTCTATTAACTTCA-TCCTTAAATA-CTAA--------AAATGTTTTGTTT-----GCAC-AT--ACATGGC-TTGGTATG-GTTTAG----ATACTTAATCATCAAAAGAAAATATAA----AC---GCAAACAAGATATACTGGAag
15 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|6 ): GTTGATACATATGATATAATCTGTATATGCCACGCAACTGACAAGAACCAGTTATTACATTCTTATTTATTATACCATCAATTTAAATATCAATGTTAAATCCCCCATACCCGATCAGTCAATAGTTTTCAATACTGCCCGGTAATGATGACCAGCCAAATAATAATACATGGGTGACTTTGATGTGCATATGGTTTAAACAAAAAGGCAATGCCATTTTATCTGTCAGACGAGAATAGATGAGAACAGTTTTTTAGTGGTTGAGTAGAACAAATTTAACAACAAAACATAATTTTAAATGAAGAAAATAAATACAAATTTAGTGTTGCCAAAACTGCAAACATTTAGATTTTTTGCAATAACTTCTAATAGATGTAAAATATATTTTATCTTATAATTATGTCACAAATTGGCTAATAATTGTATGTCATAAACAGACCAAATACCAGTTATAACATGCTTATATGTAGTCATTTT
Unaligned ( gi|7 ): AGACATAAGACATAAGACATATTATTGACTAAAATTATATACAGTTTTAGCGTCATAATATACATGTACATATTATATAAATATCAAATATTTCATGACAGGACAGGTATGATATTTACTTTAAATTGATCGCTGCAATAAAAAATGGTATTGTCATTTCATAAAGATTATAAATATTTGTGTCATCAACAAAATCATGAGAATGAACATGATAAAGCAAATTTTAAAAATATAGTATTTGGAGTAGATCGCCTTTT
Unaligned ( gi|8 ): TATCATAAGATGTAACACATTTGATTGACTATATACAGTTTCTCTCATCATATACATATATTAAATATTTCATTACATGCAGGTATGTTTTATACTATAAATTGACCTCTGAACTAAAAGATGATGTAATCATTTAATAGAAAAAATAAGAACATGATAATGAACATAATTATGCAAATTTTGAGAAATCATATATGA
Unaligned ( gi|9 ): CATTACATGACAGGTATGCTATTTACTTTAAATTGATCTCTGCAATAAAATATGTTATAATCTTTTCATTAAAAATTATAAATATTTGTGTCATCCCCTAAATCATGACATTGAACATAAAAATGCAAATTTTAAGAAATGATCGCCTTAT
Unaligned ( gi|10 ): CTATTTACTTTTAATTGATCTTTGCATGAAAGATGTTGTAATCATTTTATAAAACTATAAATATGTGTGCCATCAACAAACTCATGAGAATGAACATAATAATGTAAATGTTAAGAAAAAATATTTGGAATTAATCGCC
Unaligned ( gi|11 ): ATTTACTTAAAACTAATCTATGAAATAATAAAGATGTTATACTCAATTATAAATTAATAATTTTTGTGTCATCAACATATAGCATGAGAATGAACATAATAATACAAATTTTAAGAAATAATATTTGGAATCTATCGC
Unaligned ( gi|12 ): TATAGACGTAAGACATTTTATTGACTTAAACTTTTTACAGTTTCTCGCCAGCATATACGTATAAAATACTATAAATCAATATCAAATATTTCATTATATGACAGGTATGCTATTTACTTTAAATTGGTCTCTGCAA
Unaligned ( gi|13 ): GTTTACTATAAATTGATATCTGCAATAAAATATGTTACAATTATTTTATAGATCTTATAAATATTTGTGTTGTCAAAAAAAAAATGAGAATGAACATAATAATGCAAATAATATTTGATTGCCTTTTTA
Unaligned ( gi|14 ): TTTACTTTAAATTGATCTCTGTAATAAAAGATGTTATAATAATTTCATAAAAATTATTAATATTTGTGTCATCAACAAAAATCATGGGAATGAACATGATAAAGCACATTTTAAGACATAATATCT
Unaligned ( gi|16 ): CAATAAAAAAAGTTATAATCATTTTATAAAAAAATATAAATATTTGTGTCATCAATAAAATCATGAGAATGAACATTATAATGCAAATTAATTAATAACATGACTTTT
Unaligned ( gi|17 ): TATGACAGAGACATAAGACAGTTTATTGACTGAAACTATATATAGTTTTTCGTCATCATATTCATATATATATATTAATATCAAATATTGCAT
Unaligned ( gi|19 ): AGATTTTATATTCATATTTAAAGACTATTAATGAACACAAACATCAAATAAAGAAATAATGTTTGGAATAGATCGCCTTCTTA
Unaligned ( gi|20 ): AAGCTTCAGAAATAAATTTATTTCAATTTAGAAGTTCTCTTTTATTTGTTAATTGCAGTAATGTTATAAACGTTAACA
Unaligned ( gi|21 ): AATGTTTGTGTCATCATACAAAATCATGAGAATGAAAATAATAATGCAAATTTTAAGAAATAATATTTAGAA
Unaligned ( gi|22 ): CAAAAGTTTCGGAAATAAATTTACTTATATTTAGAAGTACTCTATTCT
Alignments
lowQualScore : 11111111111111111 1111111111111111111111111111111111111111111111111111111111111
lowQualScore : 222 1 222222 22 1 1 2 1 11 1 33 333333333333333333333333333333 22 33 55 1 333 1 555555 2 44444444444444444 44444 9999999999999999 22 66666666666666666666 3333333 11 1 11 4444444444444444444444444444444444444444444444444444444444444 111 2222 6666666666666666 1 11 22 1 1 1 5555555555555555 111 22222 11 33333 1 11 11 222222222
lowQualScore : 2 4 111 3 5 2 2 888888 77 5 5 3 3 2 3 2 0 3 4 5 4 4 3 3 2 2 55 3 2 77 88 5 0 00 22 1 1 6 1 77 0 0 1 4 2 4 4 4 4 4 000000000000000000000000000000 6 11 6 22 55 1 7 555 5 6 777777 2 0 4 00000000000000000 4 4 1 0 1 33333 0 11 9999999999999999 11 0 3 11111111111111111111 1 1 4 8 2222222 1 8 3 1 1 3 33 2 0 3 2 33 1 4444444444444444444444444444444444444444444444444444444444444 777 2 2 2 3333 0 4 6666666666666666 0 0 33 33 0 3 2 0 3 2 2 0 1 2 3 0 1 0000000000000000 444 55555 3 33 2 11111 0 0 33 33 4 3 666666666 2 1
lowQualScore : . . ... . . . . ...... .. . . . . . . . . . . . . . . . . . .. . . .. .. . . .. .. . . . . .. . . . . . . . . . . .............................. . .. . .. .. . . ... . . ...... . . . ................. . . . . . ..... . .. ................ .. . . .................... . . . . ....... . . . . . . .. . . . . .. . ............................................................. ... . . . .... . . ................ . . .. .. . . . . . . . . . . . . . ................ ... ..... . .. . ..... . . .. .. . . ......... . .
lowQualScore : 5 0 000 0 0 5 5 555555 55 0 5 0 0 5 0 5 0 0 0 5 0 0 0 0 5 5 55 0 5 00 55 5 7 77 00 0 0 7 0 77 7 7 0 0 5 0 0 0 0 0 000000000000000000000000000000 0 00 0 00 00 0 0 000 5 0 555555 5 0 0 00000000000000000 0 0 0 7 0 33333 7 77 3333333333333333 33 7 2 22222222222222222222 0 0 0 0 2222222 0 0 2 0 0 0 88 0 0 2 0 88 0 8888888888888888888888888888888888888888888888888888888888888 555 5 0 0 8888 2 0 2222222222222222 0 2 88 88 0 2 5 0 2 5 5 0 0 5 2 8 0 0000000000000000 000 00000 2 88 5 55555 2 0 88 88 0 2 888888888 5 0
consensus : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAA-CCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACACTTGT----TTTTAATTGTTTC-AA------TAA----GTTTA-TGATAAAAATAGTTCCAAAGAT-A-TC-AAGATAATA-----TAATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCTNCNT-AGTGATCTATTAAATTCNCCCTTAAATAC-G---AA--AAA-G--TT--GTTT-----ACACAAT--ACATGGCTTTT-GCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
Reference ( family-3421 ) : ACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACAT-ATCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGACATTGAAGATCTGTATTNNTATNCACATGCGNATAGTACNCTATTAGTACGNGTTACATTTCCATTGTTTCAATGATTGTGATGTATGAAAAGGCANGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCCATTGTTTCAATGATTGTGATGTATGAAAAGGCANGTTAATTTGT---TTGCAATGATGT------TATTAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACANCAAATACGGCGACACNTGTCAATTTCTAACNGTTTC-AATTTGGTTAACGCTGTTTANTGACAAAAATAGTTTCAAAGAT-A-CC-AA-ATAATA-----TAATCAAANTNACAGTGTTGTAACTA-AGTTA---AGTGATATANGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATNANAGACTATTT--GCGAAT-AAACTTAAATAATAACGC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTAAATTTCACGAAGTCCTGACGGCT--TTCCGATCTGTCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCTCCCT-AATNATCTATTAAATTCNCCCTTAAATAC-G---AA--AGA-G--TT--GTTT-----ACACAAT--ACATGGC--TT-GCATG-GTTAAGAT--AC--TTAATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
gi|1 : ATTCAAGTTTGTCATGTTAACA---GTGGC-TCTTTTC------AACTGAGT-ATG-AGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATGGGACACAACTAAACTT
gi|1 : ACGTAGTGCGTCGTGTTTGGCCATGTTCGAATTTGATACTCATCCGGACAATGTTACGGTCTGTAGAATCACACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCGGACATTCCATCTCCATTTTAATACC-ATTTAAACAGCACTATCTGAAAGGCTTGTCTCTTCTTTCGGACTTCAAAGTCAGCTGCTGGGTGAAAATCCCTCTAAATGT--AAAAAAAT-AAATTAAAGAGGTATATAAACTTGATATTGAAGATCTG--TTGATATTCACATGCGGATGGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCAATCAACAAAAAGCGGCAAGTCTTTTATTTATTGTTTATAATTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAA-CCAAGTTTATTTGT---TTGC-ACAATGTTCGAAATATCAAGAACATGtactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaGTTCTTTTCATTATGTTGTCAAATTTAGTTTAATGTTGACTGTAACAaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttagATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTAAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGATTGTGGTTGTATACTTAGATAAAGTTGAAGACACTAAATAATTTTATTATGTTGAAGGTCATAGACAGTAAATACGACGACACTTGT-----TTTAATTGTTTCTAA-------AA-----TTTA-TGATAAAAATAGTTCCAAAGAT-AATC-AAGATAATAAG---TAATCAAATTCACAGTATTGTATCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAACGGTGTTCATATCAAAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGG-T--TTCCGATCTGACT----------------AGTAA-AATATCCAAATAGTG--ACT-TTTGT-CCTAAACTA-AATTTAAGTTCTACAT-AGTGATCTATTAAATTTCCCCTTAAATAT-GAAAAA--AAA-A--TT--CTTT-----ACATAAT--ACATGGCTTTT-GCATG-GTTAAGAT--AT--TTTATTATC-AAAGAAAACATAA----AA---GCAAACAAGATATACTTGATgtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|15 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGACATTGAAGATCTGTATTTTTATACACATGTGGATA--ACACTATTAGTACTGGTTACATTTCCATTGTTTCAATAATTGTGATGTATGAAAAGACATGTTAATTTGT
gi|18 : AATAGTTCCATAGAT-A-T-----A-AATA-----TAATCAAACTTACAGGGTTGTAACTA-AGTT-----------TACGATTCACT-AAAATCACACATTGAgt
gi|2 : GCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACAcaaag
gi|2 : caATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACAGCAAATACGGCGACACTTG-----TTTTAATTGTTTC---------TAAA---GTTTAA-GATAAAAATAGTTTCAAAGATAA-TC-AAGATA--A-----TAATCAAATTCAAAGTATTGTATCTT-AATTA---AATGATATATGATTCACT-AAAATCACACTTTAAAAGCGGTGTTCTTTTTATAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-TAT-------------AG--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGGTT--TTCCGATCTGACT----------------AGTAA-AATATCCAAACAGTG--AC--AATGT-CCTAAACTC-AAGTTAAGTTCTACAT-AGTGATCTATTAAATTTTCCCTTAAATAT-G---AA----A-A--TT--GTTTTGTTAACACAAT--ACATGGCTTTT-GCATG-GTTAAGAT--AC--TTTTTTATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTTGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttttagtaagtgttcttagggattcaaattgggtacctcttatgtactgaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattctaggtaatgaatggttgtggttaaatacttagataaagttgaagacactaaataaatttattatgttgaaggtcacagacagcaaatacggcgacacttgttttaattgtttctaaagtttaagataaaaatagtttcaaagataatcaagataataatcaaattcaaagtattgtatcttaattaaatgatatatgattcactaaaatcacactttaaaagcggtgttctttttatagactctttgtgaataaacttaaataataatactttccataatatagttcaaaattaaattgaatttcacaaagtcctgatggttttccgatctgactagtaaaatatccaaacagtgacaatgtcctaaactcaagttaagttctacatagtgatctattaaattttcccttaaatatgaaaattgttttgttaacacaatacatggcttttgcatggttaagatacttttttatcaaaagaaaacataaaagcaaacaagatatacttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : cagctcttttcattaggttgtcaaattagttcaatgttggccattacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTA-AGTT-------GGTATAATATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATAACACAGACTATTT--GCGAAT-AA-CTTAGATAAAAACGC--TGTCCAAATATCGGAGAATATCCA-AAT-------------ATATATTAAGTT-------CACA---AAG---TTAAATTAAATTTCCCGATGTACTGACGGCT--TTCCAGTCTGTCT----------------TGTAA-AATATCCAGACAGTA--AC--TATGT-CCTAAA--A-AGTT---GTTTTCCCT-CATCCTCTATTAACTTCATCCTTAAATAC-T---AA--AAATGTTTT--GTTT-----GCAC-AT--ACATGGC--TTGGTATG-GTTTAGAT--AC--TTAATCATCAAAAGAAAATATAA----AC---GCAAACAAGATATACTGGAcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : aacgtgcgGTTTATTTGTAGATTGCAATAATGT------TATTAAGAACATGccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcgtttatttgtagattgcaataatgttattaagaacatggcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : aacgtgcgctaagttggtataatattcactaaaatcacactttaaaagcggtgtccataacacagactatttgcgaataacttagataaaaacgctgtccaaatatcggagaatatccaaatatatattaagttcacaaagttaaattaaatttcccgatgtactgacggctttccagtctgtcttgtaaaatatccagacagtaactatgtcctaaaaagttgttttccctcatcctctattaacttcatccttaaatactaaaaatgttttgtttgcacatacatggcttggtatggtttagatacttaatcatcaaaagaaaatataaacgcaaacaagatatactggaccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTTgcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACAT-ATCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGTATAGTACTCTATTAGTATGCGTTACATTTCCATTGTTTCAATGATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTaaattatgtagtgcgtcgtgttttgccatgttccaatttaatactcatccaaacaatgttacgttctgtagaatcagacacttggtttaaacattttattcaattcaattttacatacatatctgatattccatctccatttttataccaatttatacagcacttttttaaagacttgtctcttattcgggactttaaaggcatgtgcttggggaaaatccctaaaaatgttaaaaaaaataaaattaaagaggtatataaaattgatattgaagatctgttgatattcacatgcgtatagtactctattagtatgcgttacatttccattgtttcaatgattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtgatcagtctaccttttatcaacaaaaagcggcacgactttaatatactgtttttaaatgttta
gi|5 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccactcaagtgtgtcttgttgatatctattgcgtgttgtcgtcgcaaacagtcacgtaatttgggtatgtaaatgtttatgattcaagttgctattggacacaactaaacttaaattGGTCACAGACACCAAATACAACAACACATGTCAATTTCTAACAGTTTT-AATTTGGTTAACACTGTTTATTGACAAATAAAGTTTCAA-----A-CCTAT-ATAATATTGATTATTTAAAATGACAGTGTTACAATTACAGATATGCAGTAATATTAAATCCACTCAAAATCACACTTTAAAAGCAGTGTCCA-ATAAAATAGTATTTCAGTGAATAAAACTTAAATGTTAACACAGTATATA------------TA---ATAATGGCTGGAATCCAAAT--------TTATGTTTACAATAACAAGTTATTAAAGTAAATTT-ACAAAGTCCTGATGG-TAATTCCTATCTGTCTGAAAATTTTTCCAGCCAACAACAATATCCAAAAAGTATTACAATATATACCT---CTATTATTTAACATCTCTCTCAATAAT-TA-GAAGTCCACCCTTAAATACTG---AATTGGT-G--CTAGATTT-----ACACAATGCACATG---------ATGTGTTAGGACAAACAATTAATCATCAAAAGAAAACATAATTGTAAACCACAAACAA-ATATGTTAGATta
15 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): GTTGATACATATGATATAATCTGTATATGCCACGCAACTGACAAGAACCAGTTATTACATTCTTATTTATTATACCATCAATTTAAATATCAATGTTAAATCCCCCATACCCGATCAGTCAATAGTTTTCAATACTGCCCGGTAATGATGACCAGCCAAATAATAATACATGGGTGACTTTGATGTGCATATGGTTTAAACAAAAAGGCAATGCCATTTTATCTGTCAGACGAGAATAGATGAGAACAGTTTTTTAGTGGTTGAGTAGAACAAATTTAACAACAAAACATAATTTTAAATGAAGAAAATAAATACAAATTTAGTGTTGCCAAAACTGCAAACATTTAGATTTTTTGCAATAACTTCTAATAGATGTAAAATATATTTTATCTTATAATTATGTCACAAATTGGCTAATAATTGTATGTCATAAACAGACCAAATACCAGTTATAACATGCTTATATGTAGTCATTTT
Unaligned ( gi|7 ): AGACATAAGACATAAGACATATTATTGACTAAAATTATATACAGTTTTAGCGTCATAATATACATGTACATATTATATAAATATCAAATATTTCATGACAGGACAGGTATGATATTTACTTTAAATTGATCGCTGCAATAAAAAATGGTATTGTCATTTCATAAAGATTATAAATATTTGTGTCATCAACAAAATCATGAGAATGAACATGATAAAGCAAATTTTAAAAATATAGTATTTGGAGTAGATCGCCTTTT
Unaligned ( gi|8 ): TATCATAAGATGTAACACATTTGATTGACTATATACAGTTTCTCTCATCATATACATATATTAAATATTTCATTACATGCAGGTATGTTTTATACTATAAATTGACCTCTGAACTAAAAGATGATGTAATCATTTAATAGAAAAAATAAGAACATGATAATGAACATAATTATGCAAATTTTGAGAAATCATATATGA
Unaligned ( gi|9 ): CATTACATGACAGGTATGCTATTTACTTTAAATTGATCTCTGCAATAAAATATGTTATAATCTTTTCATTAAAAATTATAAATATTTGTGTCATCCCCTAAATCATGACATTGAACATAAAAATGCAAATTTTAAGAAATGATCGCCTTAT
Unaligned ( gi|10 ): CTATTTACTTTTAATTGATCTTTGCATGAAAGATGTTGTAATCATTTTATAAAACTATAAATATGTGTGCCATCAACAAACTCATGAGAATGAACATAATAATGTAAATGTTAAGAAAAAATATTTGGAATTAATCGCC
Unaligned ( gi|11 ): ATTTACTTAAAACTAATCTATGAAATAATAAAGATGTTATACTCAATTATAAATTAATAATTTTTGTGTCATCAACATATAGCATGAGAATGAACATAATAATACAAATTTTAAGAAATAATATTTGGAATCTATCGC
Unaligned ( gi|12 ): TATAGACGTAAGACATTTTATTGACTTAAACTTTTTACAGTTTCTCGCCAGCATATACGTATAAAATACTATAAATCAATATCAAATATTTCATTATATGACAGGTATGCTATTTACTTTAAATTGGTCTCTGCAA
Unaligned ( gi|13 ): GTTTACTATAAATTGATATCTGCAATAAAATATGTTACAATTATTTTATAGATCTTATAAATATTTGTGTTGTCAAAAAAAAAATGAGAATGAACATAATAATGCAAATAATATTTGATTGCCTTTTTA
Unaligned ( gi|14 ): TTTACTTTAAATTGATCTCTGTAATAAAAGATGTTATAATAATTTCATAAAAATTATTAATATTTGTGTCATCAACAAAAATCATGGGAATGAACATGATAAAGCACATTTTAAGACATAATATCT
Unaligned ( gi|16 ): CAATAAAAAAAGTTATAATCATTTTATAAAAAAATATAAATATTTGTGTCATCAATAAAATCATGAGAATGAACATTATAATGCAAATTAATTAATAACATGACTTTT
Unaligned ( gi|17 ): TATGACAGAGACATAAGACAGTTTATTGACTGAAACTATATATAGTTTTTCGTCATCATATTCATATATATATATTAATATCAAATATTGCAT
Unaligned ( gi|19 ): AGATTTTATATTCATATTTAAAGACTATTAATGAACACAAACATCAAATAAAGAAATAATGTTTGGAATAGATCGCCTTCTTA
Unaligned ( gi|20 ): AAGCTTCAGAAATAAATTTATTTCAATTTAGAAGTTCTCTTTTATTTGTTAATTGCAGTAATGTTATAAACGTTAACA
Unaligned ( gi|21 ): AATGTTTGTGTCATCATACAAAATCATGAGAATGAAAATAATAATGCAAATTTTAAGAAATAATATTTAGAA
Unaligned ( gi|22 ): CAAAAGTTTCGGAAATAAATTTACTTATATTTAGAAGTACTCTATTCT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111
lowQualScore : 222 1 222222 11 1 1 1 1 11 1 11 222 1 222222 1 66666666666666666 55555 7777777777777 1 333333333333333333333 2222222 11 1 11 4444444444444444444444444444444444444444444444444444444444444 111 2222 6666666666666666 1 11 22 1 1 11 2222 4444444444444 22222 11 1 11 11 222222222
lowQualScore : 1 1 111 1 5 1 1 888888 88 5 5 1 1 1 1 1 5 1 1 5 1 1 1 1 2 1 22 1 1 22 88 5 88 6 1 1 1 1 1 1 1 111 5 999999 1 5 1 11111111111111111 1 1 22222 8 2222222222222 3 111111111111111111111 1 0 1 8 9999999 3 8 3 0 1 1 33 0 3 33 1 4444444444444444444444444444444444444444444444444444444444444 777 2 3333 0 1 6666666666666666 0 0 33 33 0 3 2 0 3 11 1 0 2 3 0 1 0000 3333333333333 55555 3 33 2 9 3 0 0 33 33 1 3 666666666 2 1
lowQualScore : . . ... . . . . ...... .. . . . . . . . . . . . . . . . . . .. . . .. .. . .. . . . . . . . . ... . ...... . . . ................. . . ..... . ............. . ..................... . . . . ....... . . . . . . .. . . .. . ............................................................. ... . .... . . ................ . . .. .. . . . . . .. . . . . . . .... ............. ..... . .. . . . . . .. .. . . ......... . .
lowQualScore : 0 0 000 0 0 0 0 555555 00 0 5 0 0 0 0 0 5 0 0 5 0 0 0 0 5 0 00 0 0 00 55 5 33 7 0 0 0 0 0 0 0 000 5 555555 0 5 0 55555555555555555 0 0 00000 3 3333333333333 3 888888888888888888888 2 2 0 0 4444444 2 0 2 2 0 0 88 0 2 88 0 8888888888888888888888888888888888888888888888888888888888888 555 5 8888 2 0 2222222222222222 0 2 88 88 0 2 5 0 2 00 0 2 5 2 8 0 0000 0000000000000 00000 2 88 5 2 0 2 0 88 88 0 2 888888888 5 0
consensus : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACACTTG-----TTTTAATTGTTTCTA-------AA----GTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
Reference ( family-3421 ) : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACACTTGT----TTTTAATTGTTTCAAT------AA----GTTTAT-GATAAAAATAGTTCCAAAGAT-ATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
gi|1 : ATTCAAGTTTGTCATGTTAACA---GTGGC-TCTTTTC------AACTGAGT-ATG-AGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATGGGACACAACTAAACTT
gi|1 : ACGTAGTGCGTCGTGTTTGGCCATGTTCGAATTTGATACTCATCCGGACAATGTTACGGTCTGTAGAATCACACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCGGACATTCCATCTCCATTTTAATACCA-TTTAAACAGCACTATCTGAAAGGCTTGTCTCTTCTTTCGGACTTCAAAGTCAGCTGCTGGGTGAAAATCCCTCTAAATGT--AAAAAAATAAA-TTAAAGAGGTATATAAACTTGATATTGAAGATCTG--TTGATATTCACATGCGGATGGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCAATCAACAAAAAGCGGCAAGTCTTTTATTTATTGTTTATAATTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGT---TTGC-ACAATGTTCGAAATATCAAGAACATGtactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaGTTCTTTTCATTATGTTGTCAAATTTAGTTTAATGTTGACTGTAACAaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttagATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTAAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGATTGTGGTTGTATACTTAGATAAAGTTGAAGACACTAAATAATTTTATTATGTTGAAGGTCATAGACAGTAAATACGACGACACTTG-----TTTTAATTGTTTCTA-------AA----ATTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATAAGT-----AATCAAATTCACAGTATTGTATCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAACGGTGTTCATATCAAAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGG-T--TTCCGATCTGACT----------------AGTAA-AATATCCAAATAGTG--ACT-TTTGT-CCTAAACTA-AATTTAAGTTCT-ACATAGTGATCTATTAAATTTCCCCTTAAATATGAAAAAAAA-A--TTC-----TTT-----ACATAAT--ACATGGCTTTTGCATG-GTTAAGAT--AT--TTTATTATC-AAAGAAAACATAA----AA---GCAAACAAGATATACTTGATgtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|15 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGACATTGAAGATCTGTATTTTTATACACATGTGGATA--ACACTATTAGTACTGGTTACATTTCCATTGTTTCAATAATTGTGATGTATGAAAAGACATGTTAATTTGT
gi|18 : AATAGTTCCATAGAT-AT----A-AATA--T-----AATCAAACTTACAGGGTTGTAACTA-AGTT-----------TACGATTCACT-AAAATCACACATTGAgt
gi|2 : GCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACAcaaag
gi|2 : caATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACAGCAAATACGGCGACACTTG-----TTTTAATTGTTTCTA-------AA----GTTTAA-GATAAAAATAGTTTCAAAGATAATCAAGATA--A--T-----AATCAAATTCAAAGTATTGTATCTT-AATTA---AATGATATATGATTCACT-AAAATCACACTTTAAAAGCGGTGTTCTTTTTATAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-TAT-------------AG--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGGTT--TTCCGATCTGACT----------------AGTAA-AATATCCAAACAGTG--AC--AATGT-CCTAAACTC-AAGTTAAGTTCT-ACATAGTGATCTATTAAATTTTCCCTTAAATATG---AAAA-----TTG-----TTTTGTTAACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTTTTTATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTTGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttttagtaagtgttcttagggattcaaattgggtacctcttatgtactgaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattctaggtaatgaatggttgtggttaaatacttagataaagttgaagacactaaataaatttattatgttgaaggtcacagacagcaaatacggcgacacttgttttaattgtttctaaagtttaagataaaaatagtttcaaagataatcaagataataatcaaattcaaagtattgtatcttaattaaatgatatatgattcactaaaatcacactttaaaagcggtgttctttttatagactctttgtgaataaacttaaataataatactttccataatatagttcaaaattaaattgaatttcacaaagtcctgatggttttccgatctgactagtaaaatatccaaacagtgacaatgtcctaaactcaagttaagttctacatagtgatctattaaattttcccttaaatatgaaaattgttttgttaacacaatacatggcttttgcatggttaagatacttttttatcaaaagaaaacataaaagcaaacaagatatacttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : cagctcttttcattaggttgtcaaattagttcaatgttggccattacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTA-AGTT-------GGTATAATATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATAACACAGACTATTT--GCGAAT-AA-CTTAGATAAAAACGC--TGTCCAAATATCGGAGAATATCCA-AAT-------------ATATATTAAGTT-------CACA---AAG---TTAAATTAAATTTCCCGATGTACTGACGGCT--TTCCAGTCTGTCT----------------TGTAA-AATATCCAGACAGTA--AC--TATGT-CCTAAA--A-AGTT---GTTTT-CCCTCATCCTCTATTAACTTCATCCTTAAATACT---AAAAATGTTTTG-----TTT-----GCAC-AT--ACATGGC-TTGGTATG-GTTTAGAT--AC--TTAATCATCAAAAGAAAATATAA----AC---GCAAACAAGATATACTGGAcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : aacgtgcgGTTTATTTGTAGATTGCAATAATGT------TATTAAGAACATGccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcgtttatttgtagattgcaataatgttattaagaacatggcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : aacgtgcgctaagttggtataatattcactaaaatcacactttaaaagcggtgtccataacacagactatttgcgaataacttagataaaaacgctgtccaaatatcggagaatatccaaatatatattaagttcacaaagttaaattaaatttcccgatgtactgacggctttccagtctgtcttgtaaaatatccagacagtaactatgtcctaaaaagttgttttccctcatcctctattaacttcatccttaaatactaaaaatgttttgtttgcacatacatggcttggtatggtttagatacttaatcatcaaaagaaaatataaacgcaaacaagatatactggaccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTTgcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACATA-TCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGTATAGTACTCTATTAGTATGCGTTACATTTCCATTGTTTCAATGATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTaaattatgtagtgcgtcgtgttttgccatgttccaatttaatactcatccaaacaatgttacgttctgtagaatcagacacttggtttaaacattttattcaattcaattttacatacatatctgatattccatctccatttttataccaatttatacagcacttttttaaagacttgtctcttattcgggactttaaaggcatgtgcttggggaaaatccctaaaaatgttaaaaaaaataaaattaaagaggtatataaaattgatattgaagatctgttgatattcacatgcgtatagtactctattagtatgcgttacatttccattgtttcaatgattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtgatcagtctaccttttatcaacaaaaagcggcacgactttaatatactgtttttaaatgttta
gi|5 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccactcaagtgtgtcttgttgatatctattgcgtgttgtcgtcgcaaacagtcacgtaatttgggtatgtaaatgtttatgattcaagttgctattggacacaactaaacttaaattGGTCACAGACACCAAATACAACAACACATGTCAATTTCTAACAGTTTTAATTTGGTTAACACTGTTTATTGACAAATAAAGTTTCAAACCT-AT----ATAATA--TTGATTATTTAAAATGACAGTGTTACAATTACAGATATGCAGTAATATTAAATCCACTCAAAATCACACTTTAAAAGCAGTGTCCA-ATAAAATAGTATTTCAGTGAATAAAACTTAAATGTTAACACAGTATATA------------TA---ATAATGGCTGGAATCCAAAT--------TTATGTTTACAATAACAAGTTATTAAAGTAAATTT-ACAAAGTCCTGATGG-TAATTCCTATCTGTCTGAAAATTTTTCCAGCCAACAACAATATCCAAAAAGTATTACAATATATACCT---CTATTATTTAACATCTCTCTCAATAAT-TA-GAAGTCCACCCTTAAATACT---GAATT-G--GTGCTAGATTT-----ACACAATGCACATG--------ATGTGTTAGGACAAACAATTAATCATCAAAAGAAAACATAATTGTAAACCACAAACAA-ATATGTTAGATta
15 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): GTTGATACATATGATATAATCTGTATATGCCACGCAACTGACAAGAACCAGTTATTACATTCTTATTTATTATACCATCAATTTAAATATCAATGTTAAATCCCCCATACCCGATCAGTCAATAGTTTTCAATACTGCCCGGTAATGATGACCAGCCAAATAATAATACATGGGTGACTTTGATGTGCATATGGTTTAAACAAAAAGGCAATGCCATTTTATCTGTCAGACGAGAATAGATGAGAACAGTTTTTTAGTGGTTGAGTAGAACAAATTTAACAACAAAACATAATTTTAAATGAAGAAAATAAATACAAATTTAGTGTTGCCAAAACTGCAAACATTTAGATTTTTTGCAATAACTTCTAATAGATGTAAAATATATTTTATCTTATAATTATGTCACAAATTGGCTAATAATTGTATGTCATAAACAGACCAAATACCAGTTATAACATGCTTATATGTAGTCATTTT
Unaligned ( gi|7 ): AGACATAAGACATAAGACATATTATTGACTAAAATTATATACAGTTTTAGCGTCATAATATACATGTACATATTATATAAATATCAAATATTTCATGACAGGACAGGTATGATATTTACTTTAAATTGATCGCTGCAATAAAAAATGGTATTGTCATTTCATAAAGATTATAAATATTTGTGTCATCAACAAAATCATGAGAATGAACATGATAAAGCAAATTTTAAAAATATAGTATTTGGAGTAGATCGCCTTTT
Unaligned ( gi|8 ): TATCATAAGATGTAACACATTTGATTGACTATATACAGTTTCTCTCATCATATACATATATTAAATATTTCATTACATGCAGGTATGTTTTATACTATAAATTGACCTCTGAACTAAAAGATGATGTAATCATTTAATAGAAAAAATAAGAACATGATAATGAACATAATTATGCAAATTTTGAGAAATCATATATGA
Unaligned ( gi|9 ): CATTACATGACAGGTATGCTATTTACTTTAAATTGATCTCTGCAATAAAATATGTTATAATCTTTTCATTAAAAATTATAAATATTTGTGTCATCCCCTAAATCATGACATTGAACATAAAAATGCAAATTTTAAGAAATGATCGCCTTAT
Unaligned ( gi|10 ): CTATTTACTTTTAATTGATCTTTGCATGAAAGATGTTGTAATCATTTTATAAAACTATAAATATGTGTGCCATCAACAAACTCATGAGAATGAACATAATAATGTAAATGTTAAGAAAAAATATTTGGAATTAATCGCC
Unaligned ( gi|11 ): ATTTACTTAAAACTAATCTATGAAATAATAAAGATGTTATACTCAATTATAAATTAATAATTTTTGTGTCATCAACATATAGCATGAGAATGAACATAATAATACAAATTTTAAGAAATAATATTTGGAATCTATCGC
Unaligned ( gi|12 ): TATAGACGTAAGACATTTTATTGACTTAAACTTTTTACAGTTTCTCGCCAGCATATACGTATAAAATACTATAAATCAATATCAAATATTTCATTATATGACAGGTATGCTATTTACTTTAAATTGGTCTCTGCAA
Unaligned ( gi|13 ): GTTTACTATAAATTGATATCTGCAATAAAATATGTTACAATTATTTTATAGATCTTATAAATATTTGTGTTGTCAAAAAAAAAATGAGAATGAACATAATAATGCAAATAATATTTGATTGCCTTTTTA
Unaligned ( gi|14 ): TTTACTTTAAATTGATCTCTGTAATAAAAGATGTTATAATAATTTCATAAAAATTATTAATATTTGTGTCATCAACAAAAATCATGGGAATGAACATGATAAAGCACATTTTAAGACATAATATCT
Unaligned ( gi|16 ): CAATAAAAAAAGTTATAATCATTTTATAAAAAAATATAAATATTTGTGTCATCAATAAAATCATGAGAATGAACATTATAATGCAAATTAATTAATAACATGACTTTT
Unaligned ( gi|17 ): TATGACAGAGACATAAGACAGTTTATTGACTGAAACTATATATAGTTTTTCGTCATCATATTCATATATATATATTAATATCAAATATTGCAT
Unaligned ( gi|19 ): AGATTTTATATTCATATTTAAAGACTATTAATGAACACAAACATCAAATAAAGAAATAATGTTTGGAATAGATCGCCTTCTTA
Unaligned ( gi|20 ): AAGCTTCAGAAATAAATTTATTTCAATTTAGAAGTTCTCTTTTATTTGTTAATTGCAGTAATGTTATAAACGTTAACA
Unaligned ( gi|21 ): AATGTTTGTGTCATCATACAAAATCATGAGAATGAAAATAATAATGCAAATTTTAAGAAATAATATTTAGAA
Unaligned ( gi|22 ): CAAAAGTTTCGGAAATAAATTTACTTATATTTAGAAGTACTCTATTCT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111
lowQualScore : 222 1 222222 11 1 1 1 1 11 1 11 222 1 222222 1 66666666666666666 6666666666666666 11 1 11 22222222 2222222 11 1 11 4444444444444444444444444444444444444444444444444444444444444 111 2222 6666666666666666 1 11 22 1 1 11 2222 4444444444444 22222 11 1 11 11 222222222
lowQualScore : 1 1 111 1 5 1 1 888888 88 5 5 1 1 1 1 1 5 1 1 5 1 1 1 1 2 1 22 1 1 22 88 5 88 6 1 1 1 1 1 1 1 111 5 999999 1 5 1 11111111111111111 1 1 8888888888888888 88 3 2 00 8 3 99999999 1 0 1 8 9999999 3 8 3 0 1 1 33 0 3 33 1 4444444444444444444444444444444444444444444444444444444444444 777 2 3333 0 1 6666666666666666 0 0 33 33 0 3 2 0 3 11 1 0 2 3 0 1 0000 3333333333333 55555 3 33 2 9 3 0 0 33 33 1 3 666666666 2 1
lowQualScore : . . ... . . . . ...... .. . . . . . . . . . . . . . . . . . .. . . .. .. . .. . . . . . . . . ... . ...... . . . ................. . . ................ .. . . .. . . ........ . . . . ....... . . . . . . .. . . .. . ............................................................. ... . .... . . ................ . . .. .. . . . . . .. . . . . . . .... ............. ..... . .. . . . . . .. .. . . ......... . .
lowQualScore : 0 0 000 0 0 0 0 555555 00 0 5 0 0 0 0 0 5 0 0 5 0 0 0 0 5 0 00 0 0 00 55 5 33 7 0 0 0 0 0 0 0 000 5 555555 0 5 0 55555555555555555 0 0 7777777777777777 33 3 5 00 8 2 88888888 2 2 0 0 4444444 2 0 2 2 0 0 88 0 2 88 0 8888888888888888888888888888888888888888888888888888888888888 555 5 8888 2 0 2222222222222222 0 2 88 88 0 2 5 0 2 00 0 2 5 2 8 0 0000 0000000000000 00000 2 88 5 2 0 2 0 88 88 0 2 888888888 5 0
consensus : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
Reference ( family-3421 ) : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
gi|1 : ATTCAAGTTTGTCATGTTAACA---GTGGC-TCTTTTC------AACTGAGT-ATG-AGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATGGGACACAACTAAACTT
gi|1 : ACGTAGTGCGTCGTGTTTGGCCATGTTCGAATTTGATACTCATCCGGACAATGTTACGGTCTGTAGAATCACACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCGGACATTCCATCTCCATTTTAATACCA-TTTAAACAGCACTATCTGAAAGGCTTGTCTCTTCTTTCGGACTTCAAAGTCAGCTGCTGGGTGAAAATCCCTCTAAATGT--AAAAAAATAAA-TTAAAGAGGTATATAAACTTGATATTGAAGATCTG--TTGATATTCACATGCGGATGGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCAATCAACAAAAAGCGGCAAGTCTTTTATTTATTGTTTATAATTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGT---TTGC-ACAATGTTCGAAATATCAAGAACATGtactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaGTTCTTTTCATTATGTTGTCAAATTTAGTTTAATGTTGACTGTAACAaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttagATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTAAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGATTGTGGTTGTATACTTAGATAAAGTTGAAGACACTAAATAATTTTATTATGTTGAAGGTCATAGACAGTAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAATTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATAAGT-----AATCAAATTCACAGTATTGTATCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAACGGTGTTCATATCAAAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGG-T--TTCCGATCTGACT----------------AGTAA-AATATCCAAATAGTG--ACT-TTTGT-CCTAAACTA-AATTTAAGTTCT-ACATAGTGATCTATTAAATTTCCCCTTAAATATGAAAAAAAA-A--TTC-----TTT-----ACATAAT--ACATGGCTTTTGCATG-GTTAAGAT--AT--TTTATTATC-AAAGAAAACATAA----AA---GCAAACAAGATATACTTGATgtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|15 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGACATTGAAGATCTGTATTTTTATACACATGTGGATA--ACACTATTAGTACTGGTTACATTTCCATTGTTTCAATAATTGTGATGTATGAAAAGACATGTTAATTTGT
gi|18 : AATAGTTCCATAGATA--TAA----ATA--T-----AATCAAACTTACAGGGTTGTAACTA-AGTT-----------TACGATTCACT-AAAATCACACATTGAgt
gi|2 : GCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACAcaaag
gi|2 : caATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACAGCAAATACGGCGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAA-GATAAAAATAGTTTCAAAGATAATCAAGATA--A--T-----AATCAAATTCAAAGTATTGTATCTT-AATTA---AATGATATATGATTCACT-AAAATCACACTTTAAAAGCGGTGTTCTTTTTATAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-TAT-------------AG--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGGTT--TTCCGATCTGACT----------------AGTAA-AATATCCAAACAGTG--AC--AATGT-CCTAAACTC-AAGTTAAGTTCT-ACATAGTGATCTATTAAATTTTCCCTTAAATATG---AAAA-----TTG-----TTTTGTTAACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTTTTTATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTTGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttttagtaagtgttcttagggattcaaattgggtacctcttatgtactgaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattctaggtaatgaatggttgtggttaaatacttagataaagttgaagacactaaataaatttattatgttgaaggtcacagacagcaaatacggcgacacttgttttaattgtttctaaagtttaagataaaaatagtttcaaagataatcaagataataatcaaattcaaagtattgtatcttaattaaatgatatatgattcactaaaatcacactttaaaagcggtgttctttttatagactctttgtgaataaacttaaataataatactttccataatatagttcaaaattaaattgaatttcacaaagtcctgatggttttccgatctgactagtaaaatatccaaacagtgacaatgtcctaaactcaagttaagttctacatagtgatctattaaattttcccttaaatatgaaaattgttttgttaacacaatacatggcttttgcatggttaagatacttttttatcaaaagaaaacataaaagcaaacaagatatacttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : cagctcttttcattaggttgtcaaattagttcaatgttggccattacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTA-AGTT-------GGTATAATATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATAACACAGACTATTT--GCGAAT-AA-CTTAGATAAAAACGC--TGTCCAAATATCGGAGAATATCCA-AAT-------------ATATATTAAGTT-------CACA---AAG---TTAAATTAAATTTCCCGATGTACTGACGGCT--TTCCAGTCTGTCT----------------TGTAA-AATATCCAGACAGTA--AC--TATGT-CCTAAA--A-AGTT---GTTTT-CCCTCATCCTCTATTAACTTCATCCTTAAATACT---AAAAATGTTTTG-----TTT-----GCAC-AT--ACATGGC-TTGGTATG-GTTTAGAT--AC--TTAATCATCAAAAGAAAATATAA----AC---GCAAACAAGATATACTGGAcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : aacgtgcgGTTTATTTGTAGATTGCAATAATGT------TATTAAGAACATGccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcgtttatttgtagattgcaataatgttattaagaacatggcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : aacgtgcgctaagttggtataatattcactaaaatcacactttaaaagcggtgtccataacacagactatttgcgaataacttagataaaaacgctgtccaaatatcggagaatatccaaatatatattaagttcacaaagttaaattaaatttcccgatgtactgacggctttccagtctgtcttgtaaaatatccagacagtaactatgtcctaaaaagttgttttccctcatcctctattaacttcatccttaaatactaaaaatgttttgtttgcacatacatggcttggtatggtttagatacttaatcatcaaaagaaaatataaacgcaaacaagatatactggaccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTTgcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACATA-TCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGTATAGTACTCTATTAGTATGCGTTACATTTCCATTGTTTCAATGATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTaaattatgtagtgcgtcgtgttttgccatgttccaatttaatactcatccaaacaatgttacgttctgtagaatcagacacttggtttaaacattttattcaattcaattttacatacatatctgatattccatctccatttttataccaatttatacagcacttttttaaagacttgtctcttattcgggactttaaaggcatgtgcttggggaaaatccctaaaaatgttaaaaaaaataaaattaaagaggtatataaaattgatattgaagatctgttgatattcacatgcgtatagtactctattagtatgcgttacatttccattgtttcaatgattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtgatcagtctaccttttatcaacaaaaagcggcacgactttaatatactgtttttaaatgttta
gi|5 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccactcaagtgtgtcttgttgatatctattgcgtgttgtcgtcgcaaacagtcacgtaatttgggtatgtaaatgtttatgattcaagttgctattggacacaactaaacttaaattGGTCACAGACACCAAATACAACAACACATGTCAATTTCTAACAGTTTTAATTTGGTTAACACTGTTTATTGACAAATAAAGTTTCAAA-----CCTATATAATA--TTGATTATTTAAAATGACAGTGTTACAATTACAGATATGCAGTAATATTAAATCCACTCAAAATCACACTTTAAAAGCAGTGTCCA-ATAAAATAGTATTTCAGTGAATAAAACTTAAATGTTAACACAGTATATA------------TA---ATAATGGCTGGAATCCAAAT--------TTATGTTTACAATAACAAGTTATTAAAGTAAATTT-ACAAAGTCCTGATGG-TAATTCCTATCTGTCTGAAAATTTTTCCAGCCAACAACAATATCCAAAAAGTATTACAATATATACCT---CTATTATTTAACATCTCTCTCAATAAT-TA-GAAGTCCACCCTTAAATACT---GAATT-G--GTGCTAGATTT-----ACACAATGCACATG--------ATGTGTTAGGACAAACAATTAATCATCAAAAGAAAACATAATTGTAAACCACAAACAA-ATATGTTAGATta
15 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): GTTGATACATATGATATAATCTGTATATGCCACGCAACTGACAAGAACCAGTTATTACATTCTTATTTATTATACCATCAATTTAAATATCAATGTTAAATCCCCCATACCCGATCAGTCAATAGTTTTCAATACTGCCCGGTAATGATGACCAGCCAAATAATAATACATGGGTGACTTTGATGTGCATATGGTTTAAACAAAAAGGCAATGCCATTTTATCTGTCAGACGAGAATAGATGAGAACAGTTTTTTAGTGGTTGAGTAGAACAAATTTAACAACAAAACATAATTTTAAATGAAGAAAATAAATACAAATTTAGTGTTGCCAAAACTGCAAACATTTAGATTTTTTGCAATAACTTCTAATAGATGTAAAATATATTTTATCTTATAATTATGTCACAAATTGGCTAATAATTGTATGTCATAAACAGACCAAATACCAGTTATAACATGCTTATATGTAGTCATTTT
Unaligned ( gi|7 ): AGACATAAGACATAAGACATATTATTGACTAAAATTATATACAGTTTTAGCGTCATAATATACATGTACATATTATATAAATATCAAATATTTCATGACAGGACAGGTATGATATTTACTTTAAATTGATCGCTGCAATAAAAAATGGTATTGTCATTTCATAAAGATTATAAATATTTGTGTCATCAACAAAATCATGAGAATGAACATGATAAAGCAAATTTTAAAAATATAGTATTTGGAGTAGATCGCCTTTT
Unaligned ( gi|8 ): TATCATAAGATGTAACACATTTGATTGACTATATACAGTTTCTCTCATCATATACATATATTAAATATTTCATTACATGCAGGTATGTTTTATACTATAAATTGACCTCTGAACTAAAAGATGATGTAATCATTTAATAGAAAAAATAAGAACATGATAATGAACATAATTATGCAAATTTTGAGAAATCATATATGA
Unaligned ( gi|9 ): CATTACATGACAGGTATGCTATTTACTTTAAATTGATCTCTGCAATAAAATATGTTATAATCTTTTCATTAAAAATTATAAATATTTGTGTCATCCCCTAAATCATGACATTGAACATAAAAATGCAAATTTTAAGAAATGATCGCCTTAT
Unaligned ( gi|10 ): CTATTTACTTTTAATTGATCTTTGCATGAAAGATGTTGTAATCATTTTATAAAACTATAAATATGTGTGCCATCAACAAACTCATGAGAATGAACATAATAATGTAAATGTTAAGAAAAAATATTTGGAATTAATCGCC
Unaligned ( gi|11 ): ATTTACTTAAAACTAATCTATGAAATAATAAAGATGTTATACTCAATTATAAATTAATAATTTTTGTGTCATCAACATATAGCATGAGAATGAACATAATAATACAAATTTTAAGAAATAATATTTGGAATCTATCGC
Unaligned ( gi|12 ): TATAGACGTAAGACATTTTATTGACTTAAACTTTTTACAGTTTCTCGCCAGCATATACGTATAAAATACTATAAATCAATATCAAATATTTCATTATATGACAGGTATGCTATTTACTTTAAATTGGTCTCTGCAA
Unaligned ( gi|13 ): GTTTACTATAAATTGATATCTGCAATAAAATATGTTACAATTATTTTATAGATCTTATAAATATTTGTGTTGTCAAAAAAAAAATGAGAATGAACATAATAATGCAAATAATATTTGATTGCCTTTTTA
Unaligned ( gi|14 ): TTTACTTTAAATTGATCTCTGTAATAAAAGATGTTATAATAATTTCATAAAAATTATTAATATTTGTGTCATCAACAAAAATCATGGGAATGAACATGATAAAGCACATTTTAAGACATAATATCT
Unaligned ( gi|16 ): CAATAAAAAAAGTTATAATCATTTTATAAAAAAATATAAATATTTGTGTCATCAATAAAATCATGAGAATGAACATTATAATGCAAATTAATTAATAACATGACTTTT
Unaligned ( gi|17 ): TATGACAGAGACATAAGACAGTTTATTGACTGAAACTATATATAGTTTTTCGTCATCATATTCATATATATATATTAATATCAAATATTGCAT
Unaligned ( gi|19 ): AGATTTTATATTCATATTTAAAGACTATTAATGAACACAAACATCAAATAAAGAAATAATGTTTGGAATAGATCGCCTTCTTA
Unaligned ( gi|20 ): AAGCTTCAGAAATAAATTTATTTCAATTTAGAAGTTCTCTTTTATTTGTTAATTGCAGTAATGTTATAAACGTTAACA
Unaligned ( gi|21 ): AATGTTTGTGTCATCATACAAAATCATGAGAATGAAAATAATAATGCAAATTTTAAGAAATAATATTTAGAA
Unaligned ( gi|22 ): CAAAAGTTTCGGAAATAAATTTACTTATATTTAGAAGTACTCTATTCT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111
lowQualScore : 222 1 222222 11 1 1 1 1 11 1 11 222 1 222222 1 66666666666666666 6666666666666666 11 1 11 22222222 2222222 11 1 11 4444444444444444444444444444444444444444444444444444444444444 111 2222 6666666666666666 1 11 22 1 1 11 2222 4444444444444 22222 11 1 11 11 222222222
lowQualScore : 1 1 111 1 5 1 1 888888 88 5 5 1 1 1 1 1 5 1 1 5 1 1 1 1 2 1 22 1 1 22 88 5 88 6 1 1 1 1 1 1 1 111 5 999999 1 5 1 11111111111111111 1 1 8888888888888888 88 3 2 00 8 3 99999999 1 0 1 8 9999999 3 8 3 0 1 1 33 0 3 33 1 4444444444444444444444444444444444444444444444444444444444444 777 2 3333 0 1 6666666666666666 0 0 33 33 0 3 2 0 3 11 1 0 2 3 0 1 0000 3333333333333 55555 3 33 2 9 3 0 0 33 33 1 3 666666666 2 1
lowQualScore : . . ... . . . . ...... .. . . . . . . . . . . . . . . . . . .. . . .. .. . .. . . . . . . . . ... . ...... . . . ................. . . ................ .. . . .. . . ........ . . . . ....... . . . . . . .. . . .. . ............................................................. ... . .... . . ................ . . .. .. . . . . . .. . . . . . . .... ............. ..... . .. . . . . . .. .. . . ......... . .
lowQualScore : 0 0 000 0 0 0 0 555555 00 0 5 0 0 0 0 0 5 0 0 5 0 0 0 0 5 0 00 0 0 00 55 5 33 7 0 0 0 0 0 0 0 000 5 555555 0 5 0 55555555555555555 0 0 7777777777777777 33 3 5 00 8 2 88888888 2 2 0 0 4444444 2 0 2 2 0 0 88 0 2 88 0 8888888888888888888888888888888888888888888888888888888888888 555 5 8888 2 0 2222222222222222 0 2 88 88 0 2 5 0 2 00 0 2 5 2 8 0 0000 0000000000000 00000 2 88 5 2 0 2 0 88 88 0 2 888888888 5 0
consensus : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
Reference ( family-3421 ) : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
gi|1 : ATTCAAGTTTGTCATGTTAACA---GTGGC-TCTTTTC------AACTGAGT-ATG-AGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATGGGACACAACTAAACTT
gi|1 : ACGTAGTGCGTCGTGTTTGGCCATGTTCGAATTTGATACTCATCCGGACAATGTTACGGTCTGTAGAATCACACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCGGACATTCCATCTCCATTTTAATACCA-TTTAAACAGCACTATCTGAAAGGCTTGTCTCTTCTTTCGGACTTCAAAGTCAGCTGCTGGGTGAAAATCCCTCTAAATGT--AAAAAAATAAA-TTAAAGAGGTATATAAACTTGATATTGAAGATCTG--TTGATATTCACATGCGGATGGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCAATCAACAAAAAGCGGCAAGTCTTTTATTTATTGTTTATAATTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGT---TTGC-ACAATGTTCGAAATATCAAGAACATGtactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaGTTCTTTTCATTATGTTGTCAAATTTAGTTTAATGTTGACTGTAACAaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttagATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTAAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGATTGTGGTTGTATACTTAGATAAAGTTGAAGACACTAAATAATTTTATTATGTTGAAGGTCATAGACAGTAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAATTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATAAGT-----AATCAAATTCACAGTATTGTATCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAACGGTGTTCATATCAAAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGG-T--TTCCGATCTGACT----------------AGTAA-AATATCCAAATAGTG--ACT-TTTGT-CCTAAACTA-AATTTAAGTTCT-ACATAGTGATCTATTAAATTTCCCCTTAAATATGAAAAAAAA-A--TTC-----TTT-----ACATAAT--ACATGGCTTTTGCATG-GTTAAGAT--AT--TTTATTATC-AAAGAAAACATAA----AA---GCAAACAAGATATACTTGATgtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|15 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGACATTGAAGATCTGTATTTTTATACACATGTGGATA--ACACTATTAGTACTGGTTACATTTCCATTGTTTCAATAATTGTGATGTATGAAAAGACATGTTAATTTGT
gi|18 : AATAGTTCCATAGATA--TAA----ATA--T-----AATCAAACTTACAGGGTTGTAACTA-AGTT-----------TACGATTCACT-AAAATCACACATTGAgt
gi|2 : GCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACAcaaag
gi|2 : caATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACAGCAAATACGGCGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAA-GATAAAAATAGTTTCAAAGATAATCAAGATA--A--T-----AATCAAATTCAAAGTATTGTATCTT-AATTA---AATGATATATGATTCACT-AAAATCACACTTTAAAAGCGGTGTTCTTTTTATAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-TAT-------------AG--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGGTT--TTCCGATCTGACT----------------AGTAA-AATATCCAAACAGTG--AC--AATGT-CCTAAACTC-AAGTTAAGTTCT-ACATAGTGATCTATTAAATTTTCCCTTAAATATG---AAAA-----TTG-----TTTTGTTAACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTTTTTATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTTGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttttagtaagtgttcttagggattcaaattgggtacctcttatgtactgaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattctaggtaatgaatggttgtggttaaatacttagataaagttgaagacactaaataaatttattatgttgaaggtcacagacagcaaatacggcgacacttgttttaattgtttctaaagtttaagataaaaatagtttcaaagataatcaagataataatcaaattcaaagtattgtatcttaattaaatgatatatgattcactaaaatcacactttaaaagcggtgttctttttatagactctttgtgaataaacttaaataataatactttccataatatagttcaaaattaaattgaatttcacaaagtcctgatggttttccgatctgactagtaaaatatccaaacagtgacaatgtcctaaactcaagttaagttctacatagtgatctattaaattttcccttaaatatgaaaattgttttgttaacacaatacatggcttttgcatggttaagatacttttttatcaaaagaaaacataaaagcaaacaagatatacttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : cagctcttttcattaggttgtcaaattagttcaatgttggccattacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTA-AGTT-------GGTATAATATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATAACACAGACTATTT--GCGAAT-AA-CTTAGATAAAAACGC--TGTCCAAATATCGGAGAATATCCA-AAT-------------ATATATTAAGTT-------CACA---AAG---TTAAATTAAATTTCCCGATGTACTGACGGCT--TTCCAGTCTGTCT----------------TGTAA-AATATCCAGACAGTA--AC--TATGT-CCTAAA--A-AGTT---GTTTT-CCCTCATCCTCTATTAACTTCATCCTTAAATACT---AAAAATGTTTTG-----TTT-----GCAC-AT--ACATGGC-TTGGTATG-GTTTAGAT--AC--TTAATCATCAAAAGAAAATATAA----AC---GCAAACAAGATATACTGGAcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : aacgtgcgGTTTATTTGTAGATTGCAATAATGT------TATTAAGAACATGccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcgtttatttgtagattgcaataatgttattaagaacatggcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : aacgtgcgctaagttggtataatattcactaaaatcacactttaaaagcggtgtccataacacagactatttgcgaataacttagataaaaacgctgtccaaatatcggagaatatccaaatatatattaagttcacaaagttaaattaaatttcccgatgtactgacggctttccagtctgtcttgtaaaatatccagacagtaactatgtcctaaaaagttgttttccctcatcctctattaacttcatccttaaatactaaaaatgttttgtttgcacatacatggcttggtatggtttagatacttaatcatcaaaagaaaatataaacgcaaacaagatatactggaccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTTgcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACATA-TCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGTATAGTACTCTATTAGTATGCGTTACATTTCCATTGTTTCAATGATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTaaattatgtagtgcgtcgtgttttgccatgttccaatttaatactcatccaaacaatgttacgttctgtagaatcagacacttggtttaaacattttattcaattcaattttacatacatatctgatattccatctccatttttataccaatttatacagcacttttttaaagacttgtctcttattcgggactttaaaggcatgtgcttggggaaaatccctaaaaatgttaaaaaaaataaaattaaagaggtatataaaattgatattgaagatctgttgatattcacatgcgtatagtactctattagtatgcgttacatttccattgtttcaatgattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtgatcagtctaccttttatcaacaaaaagcggcacgactttaatatactgtttttaaatgttta
gi|5 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccactcaagtgtgtcttgttgatatctattgcgtgttgtcgtcgcaaacagtcacgtaatttgggtatgtaaatgtttatgattcaagttgctattggacacaactaaacttaaattGGTCACAGACACCAAATACAACAACACATGTCAATTTCTAACAGTTTTAATTTGGTTAACACTGTTTATTGACAAATAAAGTTTCAAA-----CCTATATAATA--TTGATTATTTAAAATGACAGTGTTACAATTACAGATATGCAGTAATATTAAATCCACTCAAAATCACACTTTAAAAGCAGTGTCCA-ATAAAATAGTATTTCAGTGAATAAAACTTAAATGTTAACACAGTATATA------------TA---ATAATGGCTGGAATCCAAAT--------TTATGTTTACAATAACAAGTTATTAAAGTAAATTT-ACAAAGTCCTGATGG-TAATTCCTATCTGTCTGAAAATTTTTCCAGCCAACAACAATATCCAAAAAGTATTACAATATATACCT---CTATTATTTAACATCTCTCTCAATAAT-TA-GAAGTCCACCCTTAAATACT---GAATT-G--GTGCTAGATTT-----ACACAATGCACATG--------ATGTGTTAGGACAAACAATTAATCATCAAAAGAAAACATAATTGTAAACCACAAACAA-ATATGTTAGATta
blockSeqs : G T TCT T G G G GTCGCA . C T T T C T G . T T A T T T A G G TG T G AA TA A TA G T C A A A T A AGA A . G . T . A A ATGTCAATTTCTAACA TG T G AT G A TTGATT C A C ATGCAGT C C T T C CA A A AG T TAATAATGGCTGGAATCCAAATTTATGTTTACAATAAC TTA C TAA A GAAAATTTTTCCAGCC C TT AA A A C T T CT A C T T G TGGTGCTAGA TGTTA A GC G T T T AA AA T A TTGTAAACC G T
blockSeqs : . . TT . . G C T A T T T . AAAT T . T C A . . A . G AATATCGGAGAATATCCAAATATATATTAAGTTCACA . C TT T . . . . . A C . T A C C T A T ATGTTTTG . A . G . G . . . A A AA G G
blockSeqs : . . . . T A A . . A . . A A . . . . A TAATATAGTTCA . . CT T . . . . . . . . . C T . . A T TTG . . . . . . . . . A A AC . A
blockSeqs : . . A .
blockSeqCons : *******
originalCons : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTTA---AATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
finalCons : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA-AGTT-------GATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
15 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): GTTGATACATATGATATAATCTGTATATGCCACGCAACTGACAAGAACCAGTTATTACATTCTTATTTATTATACCATCAATTTAAATATCAATGTTAAATCCCCCATACCCGATCAGTCAATAGTTTTCAATACTGCCCGGTAATGATGACCAGCCAAATAATAATACATGGGTGACTTTGATGTGCATATGGTTTAAACAAAAAGGCAATGCCATTTTATCTGTCAGACGAGAATAGATGAGAACAGTTTTTTAGTGGTTGAGTAGAACAAATTTAACAACAAAACATAATTTTAAATGAAGAAAATAAATACAAATTTAGTGTTGCCAAAACTGCAAACATTTAGATTTTTTGCAATAACTTCTAATAGATGTAAAATATATTTTATCTTATAATTATGTCACAAATTGGCTAATAATTGTATGTCATAAACAGACCAAATACCAGTTATAACATGCTTATATGTAGTCATTTT
Unaligned ( gi|7 ): AGACATAAGACATAAGACATATTATTGACTAAAATTATATACAGTTTTAGCGTCATAATATACATGTACATATTATATAAATATCAAATATTTCATGACAGGACAGGTATGATATTTACTTTAAATTGATCGCTGCAATAAAAAATGGTATTGTCATTTCATAAAGATTATAAATATTTGTGTCATCAACAAAATCATGAGAATGAACATGATAAAGCAAATTTTAAAAATATAGTATTTGGAGTAGATCGCCTTTT
Unaligned ( gi|8 ): TATCATAAGATGTAACACATTTGATTGACTATATACAGTTTCTCTCATCATATACATATATTAAATATTTCATTACATGCAGGTATGTTTTATACTATAAATTGACCTCTGAACTAAAAGATGATGTAATCATTTAATAGAAAAAATAAGAACATGATAATGAACATAATTATGCAAATTTTGAGAAATCATATATGA
Unaligned ( gi|9 ): CATTACATGACAGGTATGCTATTTACTTTAAATTGATCTCTGCAATAAAATATGTTATAATCTTTTCATTAAAAATTATAAATATTTGTGTCATCCCCTAAATCATGACATTGAACATAAAAATGCAAATTTTAAGAAATGATCGCCTTAT
Unaligned ( gi|10 ): CTATTTACTTTTAATTGATCTTTGCATGAAAGATGTTGTAATCATTTTATAAAACTATAAATATGTGTGCCATCAACAAACTCATGAGAATGAACATAATAATGTAAATGTTAAGAAAAAATATTTGGAATTAATCGCC
Unaligned ( gi|11 ): ATTTACTTAAAACTAATCTATGAAATAATAAAGATGTTATACTCAATTATAAATTAATAATTTTTGTGTCATCAACATATAGCATGAGAATGAACATAATAATACAAATTTTAAGAAATAATATTTGGAATCTATCGC
Unaligned ( gi|12 ): TATAGACGTAAGACATTTTATTGACTTAAACTTTTTACAGTTTCTCGCCAGCATATACGTATAAAATACTATAAATCAATATCAAATATTTCATTATATGACAGGTATGCTATTTACTTTAAATTGGTCTCTGCAA
Unaligned ( gi|13 ): GTTTACTATAAATTGATATCTGCAATAAAATATGTTACAATTATTTTATAGATCTTATAAATATTTGTGTTGTCAAAAAAAAAATGAGAATGAACATAATAATGCAAATAATATTTGATTGCCTTTTTA
Unaligned ( gi|14 ): TTTACTTTAAATTGATCTCTGTAATAAAAGATGTTATAATAATTTCATAAAAATTATTAATATTTGTGTCATCAACAAAAATCATGGGAATGAACATGATAAAGCACATTTTAAGACATAATATCT
Unaligned ( gi|16 ): CAATAAAAAAAGTTATAATCATTTTATAAAAAAATATAAATATTTGTGTCATCAATAAAATCATGAGAATGAACATTATAATGCAAATTAATTAATAACATGACTTTT
Unaligned ( gi|17 ): TATGACAGAGACATAAGACAGTTTATTGACTGAAACTATATATAGTTTTTCGTCATCATATTCATATATATATATTAATATCAAATATTGCAT
Unaligned ( gi|19 ): AGATTTTATATTCATATTTAAAGACTATTAATGAACACAAACATCAAATAAAGAAATAATGTTTGGAATAGATCGCCTTCTTA
Unaligned ( gi|20 ): AAGCTTCAGAAATAAATTTATTTCAATTTAGAAGTTCTCTTTTATTTGTTAATTGCAGTAATGTTATAAACGTTAACA
Unaligned ( gi|21 ): AATGTTTGTGTCATCATACAAAATCATGAGAATGAAAATAATAATGCAAATTTTAAGAAATAATATTTAGAA
Unaligned ( gi|22 ): CAAAAGTTTCGGAAATAAATTTACTTATATTTAGAAGTACTCTATTCT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111
lowQualScore : 222 1 222222 11 1 1 1 1 11 1 11 222 1 222222 1 66666666666666666 6666666666666666 11 1 11 22222222 444444444444444444 11 1 11 4444444444444444444444444444444444444444444444444444444444444 111 2222 6666666666666666 1 11 22 1 1 11 2222 4444444444444 22222 11 1 11 11 222222222
lowQualScore : 1 1 111 1 5 1 1 888888 88 5 5 1 1 1 1 1 5 1 1 5 1 1 1 1 2 1 22 1 1 22 88 5 88 6 1 1 1 1 1 1 1 111 5 999999 1 5 1 11111111111111111 1 1 8888888888888888 88 3 2 00 8 3 99999999 1 0 1 555555555555555555 3 8 3 0 1 1 33 0 3 33 1 4444444444444444444444444444444444444444444444444444444444444 777 2 3333 0 1 6666666666666666 0 0 33 33 0 3 2 0 3 11 1 0 2 3 0 1 0000 3333333333333 55555 3 33 2 9 3 0 0 33 33 1 3 666666666 2 1
lowQualScore : . . ... . . . . ...... .. . . . . . . . . . . . . . . . . . .. . . .. .. . .. . . . . . . . . ... . ...... . . . ................. . . ................ .. . . .. . . ........ . . . .................. . . . . . . .. . . .. . ............................................................. ... . .... . . ................ . . .. .. . . . . . .. . . . . . . .... ............. ..... . .. . . . . . .. .. . . ......... . .
lowQualScore : 0 0 000 0 0 0 0 555555 00 0 5 0 0 0 0 0 5 0 0 5 0 0 0 0 5 0 00 0 0 00 55 5 33 7 0 0 0 0 0 0 0 000 5 555555 0 5 0 55555555555555555 0 0 7777777777777777 33 3 5 00 8 2 88888888 2 2 0 222222222222222222 2 0 2 2 0 0 88 0 2 88 0 8888888888888888888888888888888888888888888888888888888888888 555 5 8888 2 0 2222222222222222 0 2 88 88 0 2 5 0 2 00 0 2 5 2 8 0 0000 0000000000000 00000 2 88 5 2 0 2 0 88 88 0 2 888888888 5 0
consensus : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA---------AGTTAAATGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
Reference ( family-3421 ) : ACTCAAGTNTGTCNTGTTGACATCTGTNGCGTNTTNTCGTCGCAAACTGAGTCACGTAGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATNGGACACAACTAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTAGTGCGTCGTGTTTNGCCATGTTCNAATTTGATACTCATCCGGACAATGTTACGNTCTGTAGAATCANACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCNGACATTCCATCTCCATTTTNATACCAATTTANACAGCACTNTCTNAAAGGCTTGTCTCTTNTTCGGGACTTCAAAGNCANNTGCTNGGNGAAAATCCCTNNAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGGATAGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCNATCAACAAAAAGCGGCANGNCTTTNATNTACTGTTTNTAANTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGTAGATTGCAACAATGTTCGAAATATCAAGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTTTCATTANGTTGTCAAATTTAGTTCAATGTTGGCCGTNACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGGTTGTGGTTGNATACTTAGATAAAGTTGAAGACACTAAATAANTTTATTATGTTGAAGGTCACAGACAGCAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATA--T-----AATCAAATTCACAGTGTTGTANCTA---------AGT----TGATATACGATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATATCANAGACTNTTT--GTGAAT-AAACTTAAATAATAACAC--TNTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAG---TTAAATTGAATTTCACAAAGTCCTGATGGCT--TTCCGATCTGNCT----------------AGTAA-AATATCCAAACAGTG--AC--TATGT-CCTAAACTA-AATTTAAGTTCT-NCNTAGTGATCTATTAAATTCNCCCTTAAATACG---AAAAA-G--TTG-----TTT-----ACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTNATCATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTNGAT
gi|1 : ATTCAAGTTTGTCATGTTAACA---GTGGC-TCTTTTC------AACTGAGT-ATG-AGTTTGGGTATGTAAATGTCTACGATTCAAGTTGCTATGGGACACAACTAAACTT
gi|1 : ACGTAGTGCGTCGTGTTTGGCCATGTTCGAATTTGATACTCATCCGGACAATGTTACGGTCTGTAGAATCACACACTTGGTTTAAACATTTTATTCAATTCAGTTTTACATACGTAATCGGACATTCCATCTCCATTTTAATACCA-TTTAAACAGCACTATCTGAAAGGCTTGTCTCTTCTTTCGGACTTCAAAGTCAGCTGCTGGGTGAAAATCCCTCTAAATGT--AAAAAAATAAA-TTAAAGAGGTATATAAACTTGATATTGAAGATCTG--TTGATATTCACATGCGGATGGTACTCTATTAGTACTCGTTACATTTCCATTGTTTCAATAATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGGTCGGTCTACCTTCAATCAACAAAAAGCGGCAAGTCTTTTATTTATTGTTTATAATTGTTAAAAGAGATGATTTTACTAAACGTAAATTGATTTCCGTTGTTCAAATAATTGTCTTGTATGAAAACCAAGTTTATTTGT---TTGC-ACAATGTTCGAAATATCAAGAACATGtactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaGTTCTTTTCATTATGTTGTCAAATTTAGTTTAATGTTGACTGTAACAaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|1 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttagATATCTAAAACACCATTTTCTGCAGGTTACGTTCTAGTAAGTGTTAATGATAAAACAAGCTTCTTAGGGATTCAAATCGGGTACCTCTTATGTACTAAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCCAGGTAATGAATGATTGTGGTTGTATACTTAGATAAAGTTGAAGACACTAAATAATTTTATTATGTTGAAGGTCATAGACAGTAAATACGACGACAC--------TT------GTTTTAATT--GTTTCTAAAATTTAT-GATAAAAATAGTTCCAAAGATAATCAAGATAATAAGT-----AATCAAATTCACAGTATTGTATCTA---------AGTTAAATGATATACGATTCACT-AAAATCACACTTTAAAAACGGTGTTCATATCAAAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-AAT-------------AT--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGG-T--TTCCGATCTGACT----------------AGTAA-AATATCCAAATAGTG--ACT-TTTGT-CCTAAACTA-AATTTAAGTTCT-ACATAGTGATCTATTAAATTTCCCCTTAAATATGAAAAAAAA-A--TTC-----TTT-----ACATAAT--ACATGGCTTTTGCATG-GTTAAGAT--AT--TTTATTATC-AAAGAAAACATAA----AA---GCAAACAAGATATACTTGATgtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttctagtaagtgttaatgataaaacaagcttcttagggattcaaatcgggtacctcttatgtactaaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattccaggtaatgaatgattgtggttgtatacttagataaagttgaagacactaaataattttattatgttgaaggtcatagacagtaaatacgacgacacttgttttaattgtttctaaaatttatgataaaaatagttccaaagataatcaagataataagtaatcaaattcacagtattgtatctaagttaaatgatatacgattcactaaaatcacactttaaaaacggtgttcatatcaaagactctttgtgaataaacttaaataataatactttccataaaatatttcaaaattaaattgaatttcacaaagtcctgatggtttccgatctgactagtaaaatatccaaatagtgacttttgtcctaaactaaatttaagttctacatagtgatctattaaatttccccttaaatatgaaaaaaaaattctttacataatacatggcttttgcatggttaagatattttattatcaaagaaaacataaaagcaaacaagatatacttgat
gi|15 : attcaagtttgtcatgttaacagtggctcttttcaactgagtatgagtttgggtatgtaaatgtctacgattcaagttgctatgggacacaactaaactttactgcgcaaatgtttgcagggtgtgtatggtcatacaatattgaataagtattgtacgttgaaaaactaattcaaaaaataaaaacgagataattcattaaaaaaacatcaatgttttattcatagaaaaactgtattgaaaagtatgacatatcaactaaataaagcaaatattttgcgctaaatattaacatttactatcccttttgcaaactttgtgtagacaaacaccgaataacagccacaacaataacaacaagagcaaccacaatgtgggggaaacggtaaagattcgaacacgaacgcaacgtagtgcgtcgtgtttggccatgttcgaatttgatactcatccggacaatgttacggtctgtagaatcacacacttggtttaaacattttattcaattcagttttacatacgtaatcggacattccatctccattttaataccatttaaacagcactatctgaaaggcttgtctcttctttcggacttcaaagtcagctgctgggtgaaaatccctctaaatgtaaaaaaataaattaaagaggtatataaacttgatattgaagatctgttgatattcacatgcggatggtactctattagtactcgttacatttccattgtttcaataattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtggtcggtctaccttcaatcaacaaaaagcggcaagtcttttatttattgtttataattgttaaaagagatgattttactaaacgtaaattgatttccgttgttcaaataattgtcttgtatgaaaaccaagtttatttgtttgcacaatgttcgaaatatcaagaacatgaaacaaacgcacaaaattttacttctttaccaaaaagctaatttgtcttacttaagaaatatttacatttaatgtaataatatataagcgtaatttaacatggattgttgataaccgttttcagacgttttatacattataacttataaattaaccacttcatttctaagtttaaatattttgaagtaattttttaggttcttttcattatgttgtcaaatttagtttaatgttgactgtaacagtagtccgccatattttttttaaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTGACATTGAAGATCTGTATTTTTATACACATGTGGATA--ACACTATTAGTACTGGTTACATTTCCATTGTTTCAATAATTGTGATGTATGAAAAGACATGTTAATTTGT
gi|18 : AATAGTTCCATAGATA--TAA----ATA--T-----AATCAAACTTACAGGGTTGTAACTA---------AGT----T----TACGATTCACT-AAAATCACACATTGAgt
gi|2 : GCTCTTTTCATTAGGTTGTCAAA-TTAGTTCAATGTTGGCCATTACAcaaag
gi|2 : caATATCTAAAACACCATTTTCTGCAGGTTACGTTTTAGTAAGTGTT-----------------CTTAGGGATTCAAATTGGGTACCTCTTATGTACTGAAAATCCATAAAAACTTGCACACAACTCTGATTAACATCTCATTGTACGAGATATGTATAGATATACCCTTAATTTAACATGTATTACACTGTGAAAACATTCTAGGTAATGAATGGTTGTGGTTAAATACTTAGATAAAGTTGAAGACACTAAATAAATTTATTATGTTGAAGGTCACAGACAGCAAATACGGCGACAC--------TT------GTTTTAATT--GTTTCTAAAGTTTAA-GATAAAAATAGTTTCAAAGATAATCAAGATA--A--T-----AATCAAATTCAAAGTATTGTATCTT---------AATTAAATGATATATGATTCACT-AAAATCACACTTTAAAAGCGGTGTTCTTTTTATAGACTCTTT--GTGAAT-AAACTTAAATAATAATAC--TTTCCA------------TA---A-TAT-------------AG--------TT-------CA-----AAA---TTAAATTGAATTTCACAAAGTCCTGATGGTT--TTCCGATCTGACT----------------AGTAA-AATATCCAAACAGTG--AC--AATGT-CCTAAACTC-AAGTTAAGTTCT-ACATAGTGATCTATTAAATTTTCCCTTAAATATG---AAAA-----TTG-----TTTTGTTAACACAAT--ACATGGCTTTTGCATG-GTTAAGAT--AC--TTTTTTATCAAAAGAAAACATAA----AA---GCAAACAAGATATACTTGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatctaaaacaccattttctgcaggttacgttttagtaagtgttcttagggattcaaattgggtacctcttatgtactgaaaatccataaaaacttgcacacaactctgattaacatctcattgtacgagatatgtatagatatacccttaatttaacatgtattacactgtgaaaacattctaggtaatgaatggttgtggttaaatacttagataaagttgaagacactaaataaatttattatgttgaaggtcacagacagcaaatacggcgacacttgttttaattgtttctaaagtttaagataaaaatagtttcaaagataatcaagataataatcaaattcaaagtattgtatcttaattaaatgatatatgattcactaaaatcacactttaaaagcggtgttctttttatagactctttgtgaataaacttaaataataatactttccataatatagttcaaaattaaattgaatttcacaaagtcctgatggttttccgatctgactagtaaaatatccaaacagtgacaatgtcctaaactcaagttaagttctacatagtgatctattaaattttcccttaaatatgaaaattgttttgttaacacaatacatggcttttgcatggttaagatacttttttatcaaaagaaaacataaaagcaaacaagatatacttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : cagctcttttcattaggttgtcaaattagttcaatgttggccattacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTA---------AGT----TGGTATAATATTCACT-AAAATCACACTTTAAAAGCGGTGTCCATAACACAGACTATTT--GCGAAT-AA-CTTAGATAAAAACGC--TGTCCAAATATCGGAGAATATCCA-AAT-------------ATATATTAAGTT-------CACA---AAG---TTAAATTAAATTTCCCGATGTACTGACGGCT--TTCCAGTCTGTCT----------------TGTAA-AATATCCAGACAGTA--AC--TATGT-CCTAAA--A-AGTT---GTTTT-CCCTCATCCTCTATTAACTTCATCCTTAAATACT---AAAAATGTTTTG-----TTT-----GCAC-AT--ACATGGC-TTGGTATG-GTTTAGAT--AC--TTAATCATCAAAAGAAAATATAA----AC---GCAAACAAGATATACTGGAcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgccagagaaatcaaagatggccg
gi|3 : aacgtgcgGTTTATTTGTAGATTGCAATAATGT------TATTAAGAACATGccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcgtttatttgtagattgcaataatgttattaagaacatggcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : aacgtgcgctaagttggtataatattcactaaaatcacactttaaaagcggtgtccataacacagactatttgcgaataacttagataaaaacgctgtccaaatatcggagaatatccaaatatatattaagttcacaaagttaaattaaatttcccgatgtactgacggctttccagtctgtcttgtaaaatatccagacagtaactatgtcctaaaaagttgttttccctcatcctctattaacttcatccttaaatactaaaaatgttttgtttgcacatacatggcttggtatggtttagatacttaatcatcaaaagaaaatataaacgcaaacaagatatactggaccatacatggtaaaaatgttatgtacaacaaaatcaaaacgttttcacaccttcagttgctatattcaataaggtttcaacagtatatacataaaataaaagtttgaaatattttcacataatacttgattaataatcagtttaagctaataagtttttacaatagtaataaagatattaagacgtaagacataagacataaggcagtttctcgtcaccatatacatatatatacatatataaattaacaaatatttcgttacatgacaagtatgttttttactttaaattgatctctctaataaaagatgttataataatttcataaaaaatattaatatttgtgtcatcaacaaaaatcatgagaatgaacataatagtgcacattttaagacataatatttggaattgatcgccttattacaaaagcttcggaaataaatttacttaaatttagaagttctcACTCAAGTGTGTCTTGTTGATATCTATTGCGTGTTGTCGTCGCAAAC--AGTCACGTAATTTGGGTATGTAAATGTTTATGATTCAAGTTGCTATTGGACACAACTAAACTTgcattgagcatgttttacacgaaaagacatgttgcatttgatgatagaaagtaataaaatatttataaataaactaaaacgctgcata
gi|4 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccATGTAGTGCGTCGTGTTTTGCCATGTTCCAATTTAATACTCATCCAAACAATGTTACGTTCTGTAGAATCAGACACTTGGTTTAAACATTTTATTCAATTCAATTTTACATACATA-TCTGATATTCCATCTCCATTTTTATACCAATTTATACAGCACTTTTTTAAAGACTTGTCTCTTATTCGGGACTTTAAAGGCATGTGCTTGGGGAAAATCCCTAAAAATGTTAAAAAAAATAAAATTAAAGAGGTATATAAAATTGATATTGAAGATCTG--TTGATATTCACATGCGTATAGTACTCTATTAGTATGCGTTACATTTCCATTGTTTCAATGATTGTAATGTATGAAAAGGCAGGTTAATTTGTTTGCATGATGTGATCAGTCTACCTTTTATCAACAAAAAGCGGCACGACTTTAATATACTGTTTTTAAATGTTaaattatgtagtgcgtcgtgttttgccatgttccaatttaatactcatccaaacaatgttacgttctgtagaatcagacacttggtttaaacattttattcaattcaattttacatacatatctgatattccatctccatttttataccaatttatacagcacttttttaaagacttgtctcttattcgggactttaaaggcatgtgcttggggaaaatccctaaaaatgttaaaaaaaataaaattaaagaggtatataaaattgatattgaagatctgttgatattcacatgcgtatagtactctattagtatgcgttacatttccattgtttcaatgattgtaatgtatgaaaaggcaggttaatttgtttgcatgatgtgatcagtctaccttttatcaacaaaaagcggcacgactttaatatactgtttttaaatgttta
gi|5 : atgggttataagttgttttttttgtcattaatcattataatttgaaagaagacaagaaaaaaaggatcacatgtcttcaggtaattgtcataccatattatgcagttaattttagtgtttagcaacgtcaacatattaacgtggccaagtattcctgatataaaggatcttgcatgcactcagtacaattgtattataattgtaaatattgcccccactcaagtgtgtcttgttgatatctattgcgtgttgtcgtcgcaaacagtcacgtaatttgggtatgtaaatgtttatgattcaagttgctattggacacaactaaacttaaattGGTCACAGACACCAAATACAACAACACATGTCAATTTCTAACAGTTTTAATTTGGTTAACACTGTTTATTGACAAATAAAGTTTCAAA-----CCTATATAATA--TTGATTATTTAAAATGACAGTGTTACAATTACAGATATGCAGT-----AATATTAAATCCACTCAAAATCACACTTTAAAAGCAGTGTCCA-ATAAAATAGTATTTCAGTGAATAAAACTTAAATGTTAACACAGTATATA------------TA---ATAATGGCTGGAATCCAAAT--------TTATGTTTACAATAACAAGTTATTAAAGTAAATTT-ACAAAGTCCTGATGG-TAATTCCTATCTGTCTGAAAATTTTTCCAGCCAACAACAATATCCAAAAAGTATTACAATATATACCT---CTATTATTTAACATCTCTCTCAATAAT-TA-GAAGTCCACCCTTAAATACT---GAATT-G--GTGCTAGATTT-----ACACAATGCACATG--------ATGTGTTAGGACAAACAATTAATCATCAAAAGAAAACATAATTGTAAACCACAAACAA-ATATGTTAGATta
15 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): GTTGATACATATGATATAATCTGTATATGCCACGCAACTGACAAGAACCAGTTATTACATTCTTATTTATTATACCATCAATTTAAATATCAATGTTAAATCCCCCATACCCGATCAGTCAATAGTTTTCAATACTGCCCGGTAATGATGACCAGCCAAATAATAATACATGGGTGACTTTGATGTGCATATGGTTTAAACAAAAAGGCAATGCCATTTTATCTGTCAGACGAGAATAGATGAGAACAGTTTTTTAGTGGTTGAGTAGAACAAATTTAACAACAAAACATAATTTTAAATGAAGAAAATAAATACAAATTTAGTGTTGCCAAAACTGCAAACATTTAGATTTTTTGCAATAACTTCTAATAGATGTAAAATATATTTTATCTTATAATTATGTCACAAATTGGCTAATAATTGTATGTCATAAACAGACCAAATACCAGTTATAACATGCTTATATGTAGTCATTTT
Unaligned ( gi|7 ): AGACATAAGACATAAGACATATTATTGACTAAAATTATATACAGTTTTAGCGTCATAATATACATGTACATATTATATAAATATCAAATATTTCATGACAGGACAGGTATGATATTTACTTTAAATTGATCGCTGCAATAAAAAATGGTATTGTCATTTCATAAAGATTATAAATATTTGTGTCATCAACAAAATCATGAGAATGAACATGATAAAGCAAATTTTAAAAATATAGTATTTGGAGTAGATCGCCTTTT
Unaligned ( gi|8 ): TATCATAAGATGTAACACATTTGATTGACTATATACAGTTTCTCTCATCATATACATATATTAAATATTTCATTACATGCAGGTATGTTTTATACTATAAATTGACCTCTGAACTAAAAGATGATGTAATCATTTAATAGAAAAAATAAGAACATGATAATGAACATAATTATGCAAATTTTGAGAAATCATATATGA
Unaligned ( gi|9 ): CATTACATGACAGGTATGCTATTTACTTTAAATTGATCTCTGCAATAAAATATGTTATAATCTTTTCATTAAAAATTATAAATATTTGTGTCATCCCCTAAATCATGACATTGAACATAAAAATGCAAATTTTAAGAAATGATCGCCTTAT
Unaligned ( gi|10 ): CTATTTACTTTTAATTGATCTTTGCATGAAAGATGTTGTAATCATTTTATAAAACTATAAATATGTGTGCCATCAACAAACTCATGAGAATGAACATAATAATGTAAATGTTAAGAAAAAATATTTGGAATTAATCGCC
Unaligned ( gi|11 ): ATTTACTTAAAACTAATCTATGAAATAATAAAGATGTTATACTCAATTATAAATTAATAATTTTTGTGTCATCAACATATAGCATGAGAATGAACATAATAATACAAATTTTAAGAAATAATATTTGGAATCTATCGC
Unaligned ( gi|12 ): TATAGACGTAAGACATTTTATTGACTTAAACTTTTTACAGTTTCTCGCCAGCATATACGTATAAAATACTATAAATCAATATCAAATATTTCATTATATGACAGGTATGCTATTTACTTTAAATTGGTCTCTGCAA
Unaligned ( gi|13 ): GTTTACTATAAATTGATATCTGCAATAAAATATGTTACAATTATTTTATAGATCTTATAAATATTTGTGTTGTCAAAAAAAAAATGAGAATGAACATAATAATGCAAATAATATTTGATTGCCTTTTTA
Unaligned ( gi|14 ): TTTACTTTAAATTGATCTCTGTAATAAAAGATGTTATAATAATTTCATAAAAATTATTAATATTTGTGTCATCAACAAAAATCATGGGAATGAACATGATAAAGCACATTTTAAGACATAATATCT
Unaligned ( gi|16 ): CAATAAAAAAAGTTATAATCATTTTATAAAAAAATATAAATATTTGTGTCATCAATAAAATCATGAGAATGAACATTATAATGCAAATTAATTAATAACATGACTTTT
Unaligned ( gi|17 ): TATGACAGAGACATAAGACAGTTTATTGACTGAAACTATATATAGTTTTTCGTCATCATATTCATATATATATATTAATATCAAATATTGCAT
Unaligned ( gi|19 ): AGATTTTATATTCATATTTAAAGACTATTAATGAACACAAACATCAAATAAAGAAATAATGTTTGGAATAGATCGCCTTCTTA
Unaligned ( gi|20 ): AAGCTTCAGAAATAAATTTATTTCAATTTAGAAGTTCTCTTTTATTTGTTAATTGCAGTAATGTTATAAACGTTAACA
Unaligned ( gi|21 ): AATGTTTGTGTCATCATACAAAATCATGAGAATGAAAATAATAATGCAAATTTTAAGAAATAATATTTAGAA
Unaligned ( gi|22 ): CAAAAGTTTCGGAAATAAATTTACTTATATTTAGAAGTACTCTATTCT