lowQualScore : 1 22222222 55555555555555555555555555 222222 11 1 11 2222222222 11 11 2
lowQualScore : 6 5 2 2 6666 5555 2 7 66666666 1 7 11111111111111111111111111 3 33 2 222222 88888 77 3 5 11 1 3 3 6666666666 0 666 3 3 55 3 6 11 999 3 1 3 6 3
lowQualScore : . . . . .... .... . . ........ . . .......................... . .. . ...... ..... .. . . .. . . . .......... . ... . . .. . . .. ... . . . . .
lowQualScore : 0 7 9 9 6666 7777 7 2 22222222 6 5 88888888888888888888888888 1 99 9 111111 33333 00 8 7 00 3 6 6 6666666666 2 444 6 6 11 6 0 00 444 6 8 6 5 6
consensus : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATT-GGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTT--------TCGG-CC-CCGGTAC-GAATC-CATATTGG-CCCC-GGTGTTGAACAGACTGCGTACATGC-----TCTTTCGTG-TAAAATCACGTCGATTTCCAGC-G-AACAA----T-NATAA---A-T-AACCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAA-GCGGAA-AC-TTTAA-AAATGG-CAGAAAAGACGTTGGAAA
Reference ( gi|1 ) : TATTACATTTGTACCTAAATATAGTAACATAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTCAAAATCACGCGCCGGTATT-TGGCCCTCGGGATCAATACCGAGGCCAACATGGAAAATATGGATTT--------TTGG-CC-CCGGTAC-GAATC-CATATTGG-ACTA-GGTGTTAAACAGACTGCGTACATGC-----TCTTTCGTG-AAAAGTCACGCCGATTTCCAGC-G-AA-AA----T-GATAA---A-T-AACTTGTCAACGTCAT-AGCAACCAAATGCCATCACGAGAAAT-GCGGGA-AC-TTT-A-AAATTG-CAGAAAAGACGTTGGAAA
gi|6 : TATTACATTTATTCCTTAATATAGTAACAAAAATGGA-AT-GTTTTTTTAACAAAA----TATG-TTTACAATCATGCGCCGGTATT-GAAACC-CGGGATCAGTACCGAGGCCAATATGGAAAATATGGATTT--------TCGA-CC-CCGGTAC-GATTC-CATATTGG-CCCC-TGTGTTGAACAGACTGCTTACATGC-----TTTTTCGTG-TAAAATCACGTCGATTTCAAGC-G-AACAA----T-TATAA---A-T-AACCCGGCAACTTCAT-AGCAACCGAATACCATCACGAGAA
gi|13 : TATTAGATTTATATCTAAATATAGTAACAAAAATCGA-AC-TTTTTT------------------TTTAAAATCACGCGCCAGTATT-GAGGCATGGGGATCAATACCAAGGCCAACATGGAAAATGTGGATTT--------TTAG-CC-CCGGTAC-GAATA-CATATTGG-CCCC-GGTGTTGAACTGACAGCGTACATGC-----gagacg
gi|11 : tTATTACATTTATACTTAAATATAATAACAGCAACAGA-AC-GTTATT--ATCAAGA----TATG-TTTAAAATCACGTGTCGGTATT-GGGggaaactttcaaaatagcagaaaatacgt
gi|8 : TATTACATTTAAACCTAAATATAGTAACCAAAATATA-AC-GTTTTA--AACAGAT----TATG-TTTAAAATCACGCGCCGGTATT-GGGGCCTCGGGACTGA-ACAGGGGCCAtgttgaacagacagcgtacatactatttcgtgtaaaatcacgtcgactttcagcggacattgataaataacccgtcaacgtcatagcaaccgactgccatcacgagaaaagccaaaactttaaaaatggcagaaaaga
gi|18 : TATTACATTAATACATAAATATAGTAACAAAAATAGA-AG-GTTTTT--AACAACA----CATG-TTTAAAATCAcggtgttgaacagacagcgtacatgctctttcgtgtaaaaatacatcgatttccaacgagcaatcatacataaccgtcaacataatggtaatcgaatgtcatcacaagaaatgcgaacactttaaaaattgcagaaaagacgttggaa
gi|12 : TATTACATTTATACCAAAATATAGTAACACAAACAGA-AC-GTTTT--------AA----TACGTTTTAAAAT
gi|3 : ccggtggcatttgtagtcaaataaagcaggttcaagaaatatcatagtattatgaattactttgatgtatttgatttattataattatatcacaatgcaagcacagatgcaaaagtattccttaggttacattaatcaagttaaactaacttgATTACATTTATACCTAAATATAGTAACAAATGTAGG-AT-GTTTTT--AACAAAA----TATT-TTTGAAATCACGCGCCAGTATT-GGGGTCTCGGGATCACTACCGAGGCCAATATG---------------------------------GTAT-GAATC-CATATTGG-CCCC-GGTGTTGAACAGACTGCGTATATGC-----TATTTCGTG-TAAA-TCATGTCAATTTCCAGC-A-AGCAATCATT-GATAA---A-T-AATCCGTCGCCGTCAT-AGCAACCGAATGCCATCTCGTGAAAT-GCGAAC-ACTTTT-A-AAATGG-CAGAAAAGACGTTGG
gi|4 : ATTAAATTTATACCTAAATATAGTAACAGAAATAGA-AC-ATTTTT--GACAAAACATATATG-TTTAAAATCACGCCCTGATATT-GAGGCATCGGGATCAACACCGAGGTCAATATGGC-------------------------CC-CCGGTA--GTATT-CATATTGG-CCCT-GGTGTTAAACAGACTACGTACATGC-----TCTTTCGTG-TAAAATTGCGTCT-TTTCTAGC-GAAA-AA----T-TATAA---A-T-AACTCGTCAACGTCAT-AGCAACCGAATGCCATTATGA----------AA-AC-TTTAA-AAATGG-CAGAAAAGACGTTGGA
gi|7 : ATTACATTAATACCTAAATATAGTTACAAAAATAGA-AC-GTTTTT--AACAAAA----TATA-TTAACAATCACACGCTGATATT-GAGGCATCGGGAT------------CAGCACAGA----------------------GG-CC---GGTAC-GA-TC-CATATTGG-CCTC-GGTGTTGAACAGACTGT-TACATGC-----TCTTTCGTG-TAAAATCACGTCT-TTTCCA------A-AA-------ATAA---A-T-AACCCGTCAACGTCAT-AGCGACCGAATAACATTACGA-AAATAGTGGAATAT-TTA-A-AAATGG-AAGAAAAGACGTTTGA
gi|5 : ATCACATTTATATCTAAATAAAGTAACAAATATAGA-AC-GTTT-----ACAA------------------TCACGTGACGATATT---------GTGATTAATACCGAGGCCAGTATGGAAAATATGGAGTT--------TCGG-CT-CCTGTAC-GGATC-CTTATTGA-ACCC-GATGTTAAAAA----GCGTACATGC-----TCTTTTGTA-ATATTTTACCTAGGTTTTCAGG-G-AACAA----T-TATAGTTTA-T-AACCCGTCAACGTCAA-AGCAA-CGAATGCCATAATGAGAAAA-GCGAAA-AC-CTT-A-AAATGA-CAGAAAAGACGTTGG
gi|16 : ATTACATTTATAACTAAATATAGTAACCAAAATAGA-AC-ATTTTT--AACAAAA----TATC-TTTAAAATCACGCGCTGATATT-g
gi|2 : TTGCATTTATACCTAAATACAGCAA-A-AAATAAAGACTGTTTTA--AACAAAA----TATC-TTTACAACTACGCGCCGGTAGTGTGGCG-TCGGGATCAACACCGGGGCCAATATTGAAAACATGGATTT--------TCGA-CC-CGGGTAC-GAATC-CATATTGG-CCCC-TGTGTTAAACAGACTGTGTACATGC-----TCTTTCTTGTAAAATTGAC-TCAATTTCCAGC-G-AACAA----T-TAT-A---A-T-AACCAGTCAACGTCTT-ATCAACTGAATGCTATCACGAGAAAA-GCGGAA-AC-TTT-A-AAAATGACAGAAATGACGTTAGAAgag
gi|10 : CATTTATACCTAAA-------ACAT---T-GA-AC-GTTTTA--TACAAAA----TATG-TTTGCAATCACGCGCCAGTGTTGTGGCCC-CGGGATCAATACCGAGGACAATATTGAAAATATTGATTT--------TCGGCCC-CCGGAAC-GAATC-CATGTTGG-CCCC-GATATTAAACAAACTGCGTACATGC-----TCTTTCGTG-TAAAATTAC
gi|17 : ttATTTATACCTAAATTAAATAATAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAAACACGCGTCGGTGTaaaattaataacacatcacgagaattcacaacaaatgttatt
gi|9 : aaCAAAA----TATG-TTTAAAATCACACACCAGTATT-GGGGCCTCAGGATCAATAATGAGGCCAATATGG--------------------------CCACCGGAAC-GAATC-CATATTGG-CCTC-GGTGTTGAACAGATTGCGTACATGC-----TCTTTCATG-TAAA---------ATTTTCAGTGG-AA-AA----T-AAGAA---ATT-AAC-CGTCAACGTCAT-AGCAACTGAATGCCATCATGAGAAAA-GTGGAA-TC-TTTAA-AAATTG-CAGAAAAGATGTTAGAAA
gi|3 : TCAACACCGGGGCCAA---------TATGGATTCATACCATATTGG-CC-TCGGTAG-TGATC-C
gi|9 : attacatttatacctaaatatagtaacaaatgtaggatgtttttaacaaaatatttttgaaatcacgcgccagtattggggtctcgTCAACACCGAGGCCAA---------TATGGATTC-----------G-TT-CCGGTG--G---C-CATATTGG-CCTacagactgcgtatatgctatttcgtgtaaatcatgtcaatttccagcaagcaatcattgataaataatccgtcgccgtcatagcaaccgaatgccatctcgtgaaatgcgaacacttttaaaatggcagaaaagacgttgg
gi|7 : caaaatatgtttaaaatcacacaccagtattggggcctcaggatcaataatgTCAACACCGAGGCCAATATGGAacagattgcgtacatgctctttcatgtaaaattttcagtggaaaataagaaattaaccgtcaacgtcatagcaactgaatgccatcatgagaaaagtggaatctttaaaaattgcagaaaagatgttagaaa
gi|10 : attacattaatacctaaatatagttacaaaaatagaacgtttttaacaaaatatattaacaatcacacgctgatattgaggcatcgggatcagcacagaggccggtacgaTTAATATCGGGGCCAACATGGAacagactgttacatgctctttcgtgtaaaatcacgtcttttccaaaaataaataacccgtcaacgtcatagcgaccgaataacattacgaaaatagtggaatatttaaaaatggaagaaaagacgtttga
gi|8 : ttcatttatacctaaaacattgaacgttttatacaaaatatgtttgcaatcacgcgccagtgttgtggccccgggatcaataccgaggacaatattgaaaatattgattttcggcccccggaacgaaGG-CC-TCGGGACTGAA---CAG---GG-GCCACGGTGTTGAACAGACAGCGTACATGC-----TCTTTCGTGTAAAAAT-ACATCGATTTCCAAC-G-AGCAA----T-CATAC---A-T-AAC-CGTCAACATAAT-GGTAATCGAATGTCATCACAAGAAAT-GCGAAC-AC-TTTAA-AAATTG-CAGAAAAGACGTTGGAAacaaactgcgtacatgctctttcgtgtaaaattacaaaattaataacacatcacgagaattcacaacaaatgttatt
gi|14 : tattacatttaaacctaaatatagtaaccaaaatataacgttttaaacagattatgtttaaaatcacgcgccggtattggC-CCGGTAC-AAATT-CATATTAG-CCCC-GTAGTTAAACAGGCTGCATACATGCTGCTATTTTTTGT----AAATAACCTCGATATCAAAC-G-AACAC----T-AATTA---A-TAAACCCGTCAA-GTCAT-AATAACCGAATGCAATCACGAGAAAA-GCAGAC-AC-TTTAA-AAATTG-AAGGAAAGACATTGGAAA
gi|11 : gAATCACGTGTCGGTATTG-GGTGTTGAACAGACAGCGTACATAC-----TATTTCGTG-TAAAATCACGTCGACTTTCAGC-G-GA-CA----TTGATAA---A-T-AACCCGTCAACGTCAT-AGCAACCGACTGCCATCACGAGAAAA-GCCAAA-AC-TTTAA-AAATGG-CAGAAAAGA
gi|15 : tattacatttatacttaaatataataacagcaacagaacgttattatcaagatatgtttaaCGATTTCCAAC-G-AACAA----T-AATTA---A-T-AACTTGTCAACATCATTAACAATCGAATGCAATTACAAGAAAA-GCGGAC-AC-TTT-AAAAATGG-CAAAAAAGACGTTGGAA
gi|13 : ctAT-GCGGAA-AC-TTTCA-AAATAG-CAGAAAATACGT
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|19 ): GCACTAATAGACTTCCAGCAAAAAGTTTGACAAG
Alignments
lowQualScore : 222222222222222222
lowQualScore : 2 2 4444 5555 2 3 3 0 777777777777777777 3 3 3 44 555 66 2 11 1 7777 555 3 3 3
lowQualScore : . . .... .... . . . . .................. . . . .. ... .. . .. . .... ... . . .
lowQualScore : 7 7 9999 3333 5 8 6 4 333333333333333333 3 1 3 66 000 22 8 33 0 1111 888 3 3 3
consensus : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
Reference ( family-3205 ) : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
gi|1 : TATTACATTTGTACCTAAATATAGTAACATAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTCAAAATCACGCGCCGGTATTTGGCCCTCGGGATCAATACCGAGGCCAACATGGAAAATATGGATTTTTGG-CC-CCGGTAC-GAATCCATATTGGACTAGGTGTTAAACAGACTGCGTACATGCT-CT--TTCGTGAAAAG--TC-ACGCCGATTTCCAGCGAA-AATGAT----AA---ATAA-CTTGTCAACGTCAT-AGCAACCAAATGCCATCACGAGAAATGCGGGAACTTT-AAAATTGCAGAAAAGACGTTGGAAA
gi|10 : CATTTATACCTAAA-------ACA----TTGA-AC-GTTTTA--TACAAAA----TATG-TTTGCAATCACGCGCCAGTGTTGTGGCCCCGGGATCAATACCGAGGACAATATTGAAAATATTGATTTTCGGCCC-CCGGAAC-GAATCCATGTTGGCCCCGATATTAAACAAACTGCGTACATGCT-CT--TTCGTGTAAAA--TT-AC
gi|11 : ttTATTACATTTATACTTAAATATAATAACAGCAACAGA-AC-GTTATT--ATCAAGA----TATG-TTTAAAATCACGTGTCGGTATTGGGaaaattaataacacatcacgagaattcacaacaaatgttatt
gi|11 : AC-GTGTCGGTATTGG-----GTGTTGAACAGACAGCGTACATACT-AT--TTCGTGTAAAA--TC-ACGTCGACTTTCAGCGGACATTGAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGACTGCCATCACGAGAAAAGCCAAAACTTTAAAAATGGCAGAAAAGAtgttgaacagacagcgtacatactatttcgtgtaaaatcacgtcgactttcagcggacattgataaataacccgtcaacgtcatagcaaccgactgccatcacgagaaaagccaaaactttaaaaatggcagaaaaga
gi|12 : tattacatttatacttaaatataataacagcaacagaacgttattatcaagatatgtttaaaatcTATTACATTTATACCAAAATATAGTAACACAAACAGA-AC-GTTTT--------AA----TACGTTTTAAAAT
gi|13 : ccggtggcatttgtagtcaaataaagcaggttcaagaaatatcatagtattatgaattactttgatgtatttgatttattataattatatcacaatgcaagcacagatgcaaaagtattccttaggttacattaatcaagttaaactaacttgTATTAGATTTATATCTAAATATAGTAACAAAAATCGA-AC-TTTTTT------------------TTTAAAATCACGCGCCAGTATTGAGGCATGGGGATCAATACCAAGGCCAACATGGAAAATGTGGATTTTTAG-CC-CCGGTAC-GAATACATATTGGCCCCGGTGTTGAACTGACAGCGTACATGC
gi|13 : tGCGGAAACTTTCAAAATAGCAGAAAATACGTggaaactttcaaaatagcagaaaatacgt
gi|14 : ttattagatttatatctaaatatagtaacaaaaatcgaactttttttttaaaatcacgcgccagtattgaggcatggggatcaataccaaggccaacatggaaaatgtggatttttagccccggtacgaatacatattggccccggtgttgaactgacagcgtacatC-CCGGTAC-AAATTCATATTAGCCCCGTAGTTAAACAGGCTGCATACATGCTGCTATTTTTTGTAAA---TA-ACCTCGATATCAAACGAACACTAAT----TA---ATAAACCCGTCAA-GTCAT-AATAACCGAATGCAATCACGAGAAAAGCAGACACTTTAAAAATTGAAGGAAAGACATTGGAAA
gi|15 : gTCGATTTCCAACGAACAATAAT----TA---ATAA-CTTGTCAACATCATTAACAATCGAATGCAATTACAAGAAAAGCGGACACTTTAAAAATGGCAAAAAAGACGTTGGAA
gi|16 : cATTACATTTATAACTAAATATAGTAACCAAAATAGA-AC-ATTTTT--AACAAAA----TATC-TTTAAAATCACGCGCTGATATTGAG
gi|17 : ATTTATACCTAAATTAAATAATAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAAACACGCGTCGGTGT
gi|18 : aaTATTACATTAATACATAAATATAGTAACAAAAATAGA-AG-GTTTTT--AACAACA----CATG-TTTAAAATCA
gi|2 : TTGCATTTATACCTAAATACAGCA--AAAAATAAAGACTGTTTTA--AACAAAA----TATC-TTTACAACTACGCGCCGGTAGTGTGGCGTCGGGATCAACACCGGGGCCAATATTGAAAACATGGATTTTCGA-CC-CGGGTAC-GAATCCATATTGGCCCCTGTGTTAAACAGACTGTGTACATGCT-CT--TTCTTGTAAAA--TTGAC-TCAATTTCCAGCGAACAATTAT-----A---ATAA-CCAGTCAACGTCTT-ATCAACTGAATGCTATCACGAGAAAAGCGGAAACTTTAAAAATGACAGAAATGACGTTAGAA
gi|3 : ATTACATTTATACCTAAATATAGTAACAAATGTAGG-AT-GTTTTT--AACAAAA----TATT-TTTGAAATCACGCGCCAGTATTGGGGTCTCGGGATCACTACCGAGGCCAATATGG-------------------------TAT-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTATATGCT-AT--TTCGTGTAAA---TC-ATGTCAATTTCCAGCAAGCAATCATTGATAA---ATAA-TCCGTCGCCGTCAT-AGCAACCGAATGCCATCTCGTGAAATGCGAACACTTTTAAAATGGCAGAAAAGACGTTGG
gi|4 : ATTAAATTTATACCTAAATATAGTAACAGAAATAGA-AC-ATTTTT--GACAAAACATATATG-TTTAAAATCACGCCCTGATATTGAGGCATCGGGATCAACACCGAGGTCAATATGG--------------C---CC-CCGGTA--GTATTCATATTGGCCCTGGTGTTAAACAGACTACGTACATGCT-CT--TTCGTGTAAAA--TT-GCGTCT-TTTCTAGCGAAAAATTAT----AA---ATAA-CTCGTCAACGTCAT-AGCAACCGAATGCCATTATGA---------AAACTTTAAAAATGGCAGAAAAGACGTTGGA
gi|5 : ATCACATTTATATCTAAATAAAGTAACAAATATAGA-AC-GTTT-----ACAA------------------TCACGTGACGATATTG-----T---GATTAATACCGAGGCCAGTATGGAAAATATGGAGTTTCGG-CT-CCTGTAC-GGATCCTTATTGAACCCGATGTTAAAAA----GCGTACATGCT-CT--TT--TGTAATATTTT-ACCTAGGTTTTCAGGGAACAATTAT----AGTTTATAA-CCCGTCAACGTCAA-AGCAA-CGAATGCCATAATGAGAAAAGCGAAAACCTT-AAAATGACAGAAAAGACGTTGG
gi|6 : TATTACATTTATTCCTTAATATAGTAACAAAAATGGA-AT-GTTTTTTTAACAAAA----TATG-TTTACAATCATGCGCCGGTATTGAAACC-CGGGATCAGTACCGAGGCCAATATGGAAAATATGGATTTTCGA-CC-CCGGTAC-GATTCCATATTGGCCCCTGTGTTGAACAGACTGCTTACATGCT-TT--TTCGTGTAAAA--TC-ACGTCGATTTCAAGCGAACAATTAT----AA---ATAA-CCCGGCAACTTCAT-AGCAACCGAATACCATCACGAGAAGAGg
gi|7 : ATTACATTAATACCTAAATATAGTTACAAAAATAGA-AC-GTTTTT--AACAAAA----TATA-TTAACAATCACACGCTGATATTGAGGC------------ATCGGGATCAGCACAGA--------------GG-CC---GGTAC-GA-TCCATATTGGCCTCGGTGTTGAACAGACTGT-TACATGCT-CT--TTCGTGTAAAA--TC-ACGTC--TTTTC------CAAAAAT----AA---ATAA-CCCGTCAACGTCAT-AGCGACCGAATAACATTACGAAAATAGTGGAATATTTAAAAATGGAAGAAAAGACGTTTGAacg
gi|8 : TATTACATTTAAACCTAAATATAGTAACCAAAATATA-AC-GTTTTA--AACAGAT----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGACTGA-ACAGGGGCCA
gi|8 : GG-CC-TCGGGACTGAA--CAGG--GGCCACGGTGTTGAACAGACAGCGTACATGCT-CT--TTCGTGTAAAA--AT-ACATCGATTTCCAACGAGCAATCAT----AC---ATAA--CCGTCAACATAAT-GGTAATCGAATGTCATCACAAGAAATGCGAACACTTTAAAAATTGCAGAAAAGACGTTGGAAcggtgttgaacagacagcgtacatgctctttcgtgtaaaaatacatcgatttccaacgagcaatcatacataaccgtcaacataatggtaatcgaatgtcatcacaagaaatgcgaacactttaaaaattgcagaaaagacgttggaa
gi|9 : tattacatttaaacctaaatatagtaaccaaaatataacgttttaaacagattatgtttaaaatcacgcgccggtattggCAAAA----TATG-TTTAAAATCACACACCAGTATTGGGGCCTCAGGATCAATAATGAGGCCAATATGG------------------CCACCGGAAC-GAATCCATATTGGCCTCGGTGTTGAACAGATTGCGTACATGCT-CT--TTCATGTAAAA--T----------TTTCAGTGGAAAATAAG----AA---ATTA-ACCGTCAACGTCAT-AGCAACTGAATGCCATCATGAGAAAAGTGGAATCTTTAAAAATTGCAGAAAAGATGTTAGAAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|19 ): GCACTAATAGACTTCCAGCAAAAAGTTTGACAAG
Alignments
lowQualScore : 222222222222222222
lowQualScore : 2 2 4444 5555 2 3 3 0 777777777777777777 3 3 3 44 555 66 2 11 1 7777 555 3 3 3
lowQualScore : . . .... .... . . . . .................. . . . .. ... .. . .. . .... ... . . .
lowQualScore : 7 7 9999 3333 5 8 6 4 333333333333333333 3 1 3 66 000 22 8 33 0 1111 888 3 3 3
consensus : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
Reference ( family-3205 ) : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
gi|1 : TATTACATTTGTACCTAAATATAGTAACATAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTCAAAATCACGCGCCGGTATTTGGCCCTCGGGATCAATACCGAGGCCAACATGGAAAATATGGATTTTTGG-CC-CCGGTAC-GAATCCATATTGGACTAGGTGTTAAACAGACTGCGTACATGCT-CT--TTCGTGAAAAG--TC-ACGCCGATTTCCAGCGAA-AATGAT----AA---ATAA-CTTGTCAACGTCAT-AGCAACCAAATGCCATCACGAGAAATGCGGGAACTTT-AAAATTGCAGAAAAGACGTTGGAAA
gi|10 : CATTTATACCTAAA-------ACA----TTGA-AC-GTTTTA--TACAAAA----TATG-TTTGCAATCACGCGCCAGTGTTGTGGCCCCGGGATCAATACCGAGGACAATATTGAAAATATTGATTTTCGGCCC-CCGGAAC-GAATCCATGTTGGCCCCGATATTAAACAAACTGCGTACATGCT-CT--TTCGTGTAAAA--TT-AC
gi|11 : ttTATTACATTTATACTTAAATATAATAACAGCAACAGA-AC-GTTATT--ATCAAGA----TATG-TTTAAAATCACGTGTCGGTATTGGGaaaattaataacacatcacgagaattcacaacaaatgttatt
gi|11 : AC-GTGTCGGTATTGG-----GTGTTGAACAGACAGCGTACATACT-AT--TTCGTGTAAAA--TC-ACGTCGACTTTCAGCGGACATTGAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGACTGCCATCACGAGAAAAGCCAAAACTTTAAAAATGGCAGAAAAGAtgttgaacagacagcgtacatactatttcgtgtaaaatcacgtcgactttcagcggacattgataaataacccgtcaacgtcatagcaaccgactgccatcacgagaaaagccaaaactttaaaaatggcagaaaaga
gi|12 : tattacatttatacttaaatataataacagcaacagaacgttattatcaagatatgtttaaaatcTATTACATTTATACCAAAATATAGTAACACAAACAGA-AC-GTTTT--------AA----TACGTTTTAAAAT
gi|13 : ccggtggcatttgtagtcaaataaagcaggttcaagaaatatcatagtattatgaattactttgatgtatttgatttattataattatatcacaatgcaagcacagatgcaaaagtattccttaggttacattaatcaagttaaactaacttgTATTAGATTTATATCTAAATATAGTAACAAAAATCGA-AC-TTTTTT------------------TTTAAAATCACGCGCCAGTATTGAGGCATGGGGATCAATACCAAGGCCAACATGGAAAATGTGGATTTTTAG-CC-CCGGTAC-GAATACATATTGGCCCCGGTGTTGAACTGACAGCGTACATGC
gi|13 : tGCGGAAACTTTCAAAATAGCAGAAAATACGTggaaactttcaaaatagcagaaaatacgt
gi|14 : ttattagatttatatctaaatatagtaacaaaaatcgaactttttttttaaaatcacgcgccagtattgaggcatggggatcaataccaaggccaacatggaaaatgtggatttttagccccggtacgaatacatattggccccggtgttgaactgacagcgtacatC-CCGGTAC-AAATTCATATTAGCCCCGTAGTTAAACAGGCTGCATACATGCTGCTATTTTTTGTAAA---TA-ACCTCGATATCAAACGAACACTAAT----TA---ATAAACCCGTCAA-GTCAT-AATAACCGAATGCAATCACGAGAAAAGCAGACACTTTAAAAATTGAAGGAAAGACATTGGAAA
gi|15 : gTCGATTTCCAACGAACAATAAT----TA---ATAA-CTTGTCAACATCATTAACAATCGAATGCAATTACAAGAAAAGCGGACACTTTAAAAATGGCAAAAAAGACGTTGGAA
gi|16 : cATTACATTTATAACTAAATATAGTAACCAAAATAGA-AC-ATTTTT--AACAAAA----TATC-TTTAAAATCACGCGCTGATATTGAG
gi|17 : ATTTATACCTAAATTAAATAATAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAAACACGCGTCGGTGT
gi|18 : aaTATTACATTAATACATAAATATAGTAACAAAAATAGA-AG-GTTTTT--AACAACA----CATG-TTTAAAATCA
gi|2 : TTGCATTTATACCTAAATACAGCA--AAAAATAAAGACTGTTTTA--AACAAAA----TATC-TTTACAACTACGCGCCGGTAGTGTGGCGTCGGGATCAACACCGGGGCCAATATTGAAAACATGGATTTTCGA-CC-CGGGTAC-GAATCCATATTGGCCCCTGTGTTAAACAGACTGTGTACATGCT-CT--TTCTTGTAAAA--TTGAC-TCAATTTCCAGCGAACAATTAT-----A---ATAA-CCAGTCAACGTCTT-ATCAACTGAATGCTATCACGAGAAAAGCGGAAACTTTAAAAATGACAGAAATGACGTTAGAA
gi|3 : ATTACATTTATACCTAAATATAGTAACAAATGTAGG-AT-GTTTTT--AACAAAA----TATT-TTTGAAATCACGCGCCAGTATTGGGGTCTCGGGATCACTACCGAGGCCAATATGG-------------------------TAT-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTATATGCT-AT--TTCGTGTAAA---TC-ATGTCAATTTCCAGCAAGCAATCATTGATAA---ATAA-TCCGTCGCCGTCAT-AGCAACCGAATGCCATCTCGTGAAATGCGAACACTTTTAAAATGGCAGAAAAGACGTTGG
gi|4 : ATTAAATTTATACCTAAATATAGTAACAGAAATAGA-AC-ATTTTT--GACAAAACATATATG-TTTAAAATCACGCCCTGATATTGAGGCATCGGGATCAACACCGAGGTCAATATGG--------------C---CC-CCGGTA--GTATTCATATTGGCCCTGGTGTTAAACAGACTACGTACATGCT-CT--TTCGTGTAAAA--TT-GCGTCT-TTTCTAGCGAAAAATTAT----AA---ATAA-CTCGTCAACGTCAT-AGCAACCGAATGCCATTATGA---------AAACTTTAAAAATGGCAGAAAAGACGTTGGA
gi|5 : ATCACATTTATATCTAAATAAAGTAACAAATATAGA-AC-GTTT-----ACAA------------------TCACGTGACGATATTG-----T---GATTAATACCGAGGCCAGTATGGAAAATATGGAGTTTCGG-CT-CCTGTAC-GGATCCTTATTGAACCCGATGTTAAAAA----GCGTACATGCT-CT--TT--TGTAATATTTT-ACCTAGGTTTTCAGGGAACAATTAT----AGTTTATAA-CCCGTCAACGTCAA-AGCAA-CGAATGCCATAATGAGAAAAGCGAAAACCTT-AAAATGACAGAAAAGACGTTGG
gi|6 : TATTACATTTATTCCTTAATATAGTAACAAAAATGGA-AT-GTTTTTTTAACAAAA----TATG-TTTACAATCATGCGCCGGTATTGAAACC-CGGGATCAGTACCGAGGCCAATATGGAAAATATGGATTTTCGA-CC-CCGGTAC-GATTCCATATTGGCCCCTGTGTTGAACAGACTGCTTACATGCT-TT--TTCGTGTAAAA--TC-ACGTCGATTTCAAGCGAACAATTAT----AA---ATAA-CCCGGCAACTTCAT-AGCAACCGAATACCATCACGAGAAGAGg
gi|7 : ATTACATTAATACCTAAATATAGTTACAAAAATAGA-AC-GTTTTT--AACAAAA----TATA-TTAACAATCACACGCTGATATTGAGGC------------ATCGGGATCAGCACAGA--------------GG-CC---GGTAC-GA-TCCATATTGGCCTCGGTGTTGAACAGACTGT-TACATGCT-CT--TTCGTGTAAAA--TC-ACGTC--TTTTC------CAAAAAT----AA---ATAA-CCCGTCAACGTCAT-AGCGACCGAATAACATTACGAAAATAGTGGAATATTTAAAAATGGAAGAAAAGACGTTTGAacg
gi|8 : TATTACATTTAAACCTAAATATAGTAACCAAAATATA-AC-GTTTTA--AACAGAT----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGACTGA-ACAGGGGCCA
gi|8 : GG-CC-TCGGGACTGAA--CAGG--GGCCACGGTGTTGAACAGACAGCGTACATGCT-CT--TTCGTGTAAAA--AT-ACATCGATTTCCAACGAGCAATCAT----AC---ATAA--CCGTCAACATAAT-GGTAATCGAATGTCATCACAAGAAATGCGAACACTTTAAAAATTGCAGAAAAGACGTTGGAAcggtgttgaacagacagcgtacatgctctttcgtgtaaaaatacatcgatttccaacgagcaatcatacataaccgtcaacataatggtaatcgaatgtcatcacaagaaatgcgaacactttaaaaattgcagaaaagacgttggaa
gi|9 : tattacatttaaacctaaatatagtaaccaaaatataacgttttaaacagattatgtttaaaatcacgcgccggtattggCAAAA----TATG-TTTAAAATCACACACCAGTATTGGGGCCTCAGGATCAATAATGAGGCCAATATGG------------------CCACCGGAAC-GAATCCATATTGGCCTCGGTGTTGAACAGATTGCGTACATGCT-CT--TTCATGTAAAA--T----------TTTCAGTGGAAAATAAG----AA---ATTA-ACCGTCAACGTCAT-AGCAACTGAATGCCATCATGAGAAAAGTGGAATCTTTAAAAATTGCAGAAAAGATGTTAGAAA
blockSeqs : G T TTTA CATA T T C AAAATATTGATTTTCGGC A T G AT ATT TG G GA G TGAT TTT A T A
blockSeqs : . . AT . . G A AAAATGTGGATTTTTAG . . . . A T C GA A . . . . C
blockSeqs : . . TA . . A G AAAACATGGATTTTCGA . . . . A C G GA A . . . . A
blockSeqs : . . TA . . A C AAAATATGGAGTTTCGG . . . . A A G AA T . . . . A
blockSeqs : . . TA . . T A AAAATATGGATTTTCGA . . . . A C C AA C . . . . A
blockSeqs : . . TA . . G C AGG . . . . A T G GG T . . . . T
blockSeqs : . . AA . . A C C . . . . A T G GA T . . . . A
blockSeqs : . . TA . . A C . . . . . A C A GA T . . . . A
blockSeqs : . . TG . . A . . . . . . A C . T A . . . . A
blockSeqs : . . TA . . G . . . . . . T . . C . . . . A
blockSeqs : . . AA . . G . . . . . . . A . . . . .
blockSeqs : . . T . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . .
blockSeqCons :
originalCons : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
finalCons : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|19 ): GCACTAATAGACTTCCAGCAAAAAGTTTGACAAG
Alignments
lowQualScore : 222222222222222222
lowQualScore : 2 2 4444 5555 2 3 3 0 777777777777777777 3 3 3 44 555 66 2 11 1 7777 555 3 3 3
lowQualScore : . . .... .... . . . . .................. . . . .. ... .. . .. . .... ... . . .
lowQualScore : 7 7 9999 3333 5 8 6 4 333333333333333333 3 1 3 66 000 22 8 33 0 1111 888 3 3 3
consensus : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
Reference ( family-3205 ) : TATTACATTTATACCTAAATATAGTAACAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGATCAATACCGAGGCCAATATGGAAAATATGGATTTTCGG-CC-CCGGTAC-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTACATGCT-CT--TTCGTGTAAAA--TC-ACGTCGATTTCCAGCGAACAATNAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGAATGCCATCACGAGAAAAGCGGAAACTTTAAAAATGGCAGAAAAGACGTTGGAAA
gi|1 : TATTACATTTGTACCTAAATATAGTAACATAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTCAAAATCACGCGCCGGTATTTGGCCCTCGGGATCAATACCGAGGCCAACATGGAAAATATGGATTTTTGG-CC-CCGGTAC-GAATCCATATTGGACTAGGTGTTAAACAGACTGCGTACATGCT-CT--TTCGTGAAAAG--TC-ACGCCGATTTCCAGCGAA-AATGAT----AA---ATAA-CTTGTCAACGTCAT-AGCAACCAAATGCCATCACGAGAAATGCGGGAACTTT-AAAATTGCAGAAAAGACGTTGGAAA
gi|10 : CATTTATACCTAAA-------ACA----TTGA-AC-GTTTTA--TACAAAA----TATG-TTTGCAATCACGCGCCAGTGTTGTGGCCCCGGGATCAATACCGAGGACAATATTGAAAATATTGATTTTCGGCCC-CCGGAAC-GAATCCATGTTGGCCCCGATATTAAACAAACTGCGTACATGCT-CT--TTCGTGTAAAA--TT-AC
gi|11 : ttTATTACATTTATACTTAAATATAATAACAGCAACAGA-AC-GTTATT--ATCAAGA----TATG-TTTAAAATCACGTGTCGGTATTGGGaaaattaataacacatcacgagaattcacaacaaatgttatt
gi|11 : AC-GTGTCGGTATTGG-----GTGTTGAACAGACAGCGTACATACT-AT--TTCGTGTAAAA--TC-ACGTCGACTTTCAGCGGACATTGAT----AA---ATAA-CCCGTCAACGTCAT-AGCAACCGACTGCCATCACGAGAAAAGCCAAAACTTTAAAAATGGCAGAAAAGAtgttgaacagacagcgtacatactatttcgtgtaaaatcacgtcgactttcagcggacattgataaataacccgtcaacgtcatagcaaccgactgccatcacgagaaaagccaaaactttaaaaatggcagaaaaga
gi|12 : tattacatttatacttaaatataataacagcaacagaacgttattatcaagatatgtttaaaatcTATTACATTTATACCAAAATATAGTAACACAAACAGA-AC-GTTTT--------AA----TACGTTTTAAAAT
gi|13 : ccggtggcatttgtagtcaaataaagcaggttcaagaaatatcatagtattatgaattactttgatgtatttgatttattataattatatcacaatgcaagcacagatgcaaaagtattccttaggttacattaatcaagttaaactaacttgTATTAGATTTATATCTAAATATAGTAACAAAAATCGA-AC-TTTTTT------------------TTTAAAATCACGCGCCAGTATTGAGGCATGGGGATCAATACCAAGGCCAACATGGAAAATGTGGATTTTTAG-CC-CCGGTAC-GAATACATATTGGCCCCGGTGTTGAACTGACAGCGTACATGC
gi|13 : tGCGGAAACTTTCAAAATAGCAGAAAATACGTggaaactttcaaaatagcagaaaatacgt
gi|14 : ttattagatttatatctaaatatagtaacaaaaatcgaactttttttttaaaatcacgcgccagtattgaggcatggggatcaataccaaggccaacatggaaaatgtggatttttagccccggtacgaatacatattggccccggtgttgaactgacagcgtacatC-CCGGTAC-AAATTCATATTAGCCCCGTAGTTAAACAGGCTGCATACATGCTGCTATTTTTTGTAAA---TA-ACCTCGATATCAAACGAACACTAAT----TA---ATAAACCCGTCAA-GTCAT-AATAACCGAATGCAATCACGAGAAAAGCAGACACTTTAAAAATTGAAGGAAAGACATTGGAAA
gi|15 : gTCGATTTCCAACGAACAATAAT----TA---ATAA-CTTGTCAACATCATTAACAATCGAATGCAATTACAAGAAAAGCGGACACTTTAAAAATGGCAAAAAAGACGTTGGAA
gi|16 : cATTACATTTATAACTAAATATAGTAACCAAAATAGA-AC-ATTTTT--AACAAAA----TATC-TTTAAAATCACGCGCTGATATTGAG
gi|17 : ATTTATACCTAAATTAAATAATAAAAATAGA-AC-GTTTTT--AACAAAA----TATG-TTTAAAAACACGCGTCGGTGT
gi|18 : aaTATTACATTAATACATAAATATAGTAACAAAAATAGA-AG-GTTTTT--AACAACA----CATG-TTTAAAATCA
gi|2 : TTGCATTTATACCTAAATACAGCA--AAAAATAAAGACTGTTTTA--AACAAAA----TATC-TTTACAACTACGCGCCGGTAGTGTGGCGTCGGGATCAACACCGGGGCCAATATTGAAAACATGGATTTTCGA-CC-CGGGTAC-GAATCCATATTGGCCCCTGTGTTAAACAGACTGTGTACATGCT-CT--TTCTTGTAAAA--TTGAC-TCAATTTCCAGCGAACAATTAT-----A---ATAA-CCAGTCAACGTCTT-ATCAACTGAATGCTATCACGAGAAAAGCGGAAACTTTAAAAATGACAGAAATGACGTTAGAA
gi|3 : ATTACATTTATACCTAAATATAGTAACAAATGTAGG-AT-GTTTTT--AACAAAA----TATT-TTTGAAATCACGCGCCAGTATTGGGGTCTCGGGATCACTACCGAGGCCAATATGG-------------------------TAT-GAATCCATATTGGCCCCGGTGTTGAACAGACTGCGTATATGCT-AT--TTCGTGTAAA---TC-ATGTCAATTTCCAGCAAGCAATCATTGATAA---ATAA-TCCGTCGCCGTCAT-AGCAACCGAATGCCATCTCGTGAAATGCGAACACTTTTAAAATGGCAGAAAAGACGTTGG
gi|4 : ATTAAATTTATACCTAAATATAGTAACAGAAATAGA-AC-ATTTTT--GACAAAACATATATG-TTTAAAATCACGCCCTGATATTGAGGCATCGGGATCAACACCGAGGTCAATATGG--------------C---CC-CCGGTA--GTATTCATATTGGCCCTGGTGTTAAACAGACTACGTACATGCT-CT--TTCGTGTAAAA--TT-GCGTCT-TTTCTAGCGAAAAATTAT----AA---ATAA-CTCGTCAACGTCAT-AGCAACCGAATGCCATTATGA---------AAACTTTAAAAATGGCAGAAAAGACGTTGGA
gi|5 : ATCACATTTATATCTAAATAAAGTAACAAATATAGA-AC-GTTT-----ACAA------------------TCACGTGACGATATTG-----T---GATTAATACCGAGGCCAGTATGGAAAATATGGAGTTTCGG-CT-CCTGTAC-GGATCCTTATTGAACCCGATGTTAAAAA----GCGTACATGCT-CT--TT--TGTAATATTTT-ACCTAGGTTTTCAGGGAACAATTAT----AGTTTATAA-CCCGTCAACGTCAA-AGCAA-CGAATGCCATAATGAGAAAAGCGAAAACCTT-AAAATGACAGAAAAGACGTTGG
gi|6 : TATTACATTTATTCCTTAATATAGTAACAAAAATGGA-AT-GTTTTTTTAACAAAA----TATG-TTTACAATCATGCGCCGGTATTGAAACC-CGGGATCAGTACCGAGGCCAATATGGAAAATATGGATTTTCGA-CC-CCGGTAC-GATTCCATATTGGCCCCTGTGTTGAACAGACTGCTTACATGCT-TT--TTCGTGTAAAA--TC-ACGTCGATTTCAAGCGAACAATTAT----AA---ATAA-CCCGGCAACTTCAT-AGCAACCGAATACCATCACGAGAAGAGg
gi|7 : ATTACATTAATACCTAAATATAGTTACAAAAATAGA-AC-GTTTTT--AACAAAA----TATA-TTAACAATCACACGCTGATATTGAGGC------------ATCGGGATCAGCACAGA--------------GG-CC---GGTAC-GA-TCCATATTGGCCTCGGTGTTGAACAGACTGT-TACATGCT-CT--TTCGTGTAAAA--TC-ACGTC--TTTTC------CAAAAAT----AA---ATAA-CCCGTCAACGTCAT-AGCGACCGAATAACATTACGAAAATAGTGGAATATTTAAAAATGGAAGAAAAGACGTTTGAacg
gi|8 : TATTACATTTAAACCTAAATATAGTAACCAAAATATA-AC-GTTTTA--AACAGAT----TATG-TTTAAAATCACGCGCCGGTATTGGGGCCTCGGGACTGA-ACAGGGGCCA
gi|8 : GG-CC-TCGGGACTGAA--CAGG--GGCCACGGTGTTGAACAGACAGCGTACATGCT-CT--TTCGTGTAAAA--AT-ACATCGATTTCCAACGAGCAATCAT----AC---ATAA--CCGTCAACATAAT-GGTAATCGAATGTCATCACAAGAAATGCGAACACTTTAAAAATTGCAGAAAAGACGTTGGAAcggtgttgaacagacagcgtacatgctctttcgtgtaaaaatacatcgatttccaacgagcaatcatacataaccgtcaacataatggtaatcgaatgtcatcacaagaaatgcgaacactttaaaaattgcagaaaagacgttggaa
gi|9 : tattacatttaaacctaaatatagtaaccaaaatataacgttttaaacagattatgtttaaaatcacgcgccggtattggCAAAA----TATG-TTTAAAATCACACACCAGTATTGGGGCCTCAGGATCAATAATGAGGCCAATATGG------------------CCACCGGAAC-GAATCCATATTGGCCTCGGTGTTGAACAGATTGCGTACATGCT-CT--TTCATGTAAAA--T----------TTTCAGTGGAAAATAAG----AA---ATTA-ACCGTCAACGTCAT-AGCAACTGAATGCCATCATGAGAAAAGTGGAATCTTTAAAAATTGCAGAAAAGATGTTAGAAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|19 ): GCACTAATAGACTTCCAGCAAAAAGTTTGACAAG