lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111
lowQualScore : 4 11 444444444444444444 111111111111 1 11 11 333333 444444444 11111 22 11111111 1111 22222 33333333333333333333333333 8888888888888888888888888888888888888888888888888888 1 33333 444 1 111 000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111 11111111 11 11111111111 1 777777 111 222222222 1 11 1 1 1111111111 777777777777777777777777777777777777777777777 55555 2222222222222222222222 22222 66666666666666 1 1 77777777777777 1 4444444444444 333333
lowQualScore : 0 1 99 0 777777777777777777 0 999999999999 7 2 2 22 66 55 6 8888 4 4 4 8888 888888 55 333333333 4 1 00000 666 3 2 66 666 7777 5 3 22222222 2 8888 1 33 88 99999 44 88888888888888888888888888 777 5 0000000000000000000000000000000000000000000000000000 4 4 2 4 777 4 6 33333 2 555 000 5 2 1 77777 000 3 5 77 3 3 888888 6 888888888888888888888888888888888888888888888888888888888888888888888888888888888888 888888 99999999 2 2 33 33 11111 00000000 44 888 99 2 0 333 33333333333 44 5 5 8 222222 666 5 444444444 2 4 6666 0 3 77 3 3 5555555555 4 444444444444444444444444444444444444444444444 0 44444 7 44 555 7777 5555555555555555555555 3 33333 666 88 4 11111111111111 0 6 5 5 33333333333333 77 3 66 6 9 6 8888888888888 333333 3
lowQualScore : . . .. . .................. . ............ . . . .. .. .. . .... . . . .... ...... .. ......... . . ..... ... . . .. ... .... . . ........ . .... . .. .. ..... .. .......................... ... . .................................................... . . . . ... . . ..... . ... ... . . . ..... ... . . .. . . ...... . .................................................................................... ...... ........ . . .. .. ..... ........ .. ... .. . . ... ........... .. . . . ...... ... . ......... . . .... . . .. . . .......... . ............................................. . ..... . .. ... .... ...................... . ..... ... .. . .............. . . . . .............. .. . .. . . . ............. ...... .
lowQualScore : 0 0 00 8 333333333333333333 1 777777777777 2 2 2 88 33 55 6 5555 5 0 0 5555 999999 55 999999999 0 6 00000 444 6 3 11 444 7777 2 3 11111111 9 5555 5 22 55 11111 22 11111111111111111111111111 000 1 5555555555555555555555555555555555555555555555555555 4 4 7 4 111 0 0 22222 9 000 999 0 9 4 11111 000 9 0 33 1 1 888888 2 666666666666666666666666666666666666666666666666666666666666666666666666666666666666 222222 77777777 7 8 44 22 66666 99999999 99 000 00 7 6 555 77777777777 55 4 5 9 111111 999 5 444444444 6 3 5555 4 7 00 3 1 9999999999 1 666666666666666666666666666666666666666666666 7 55555 4 66 888 1111 0000000000000000000000 6 66666 333 44 0 11111111111111 7 7 0 0 55555555555555 00 0 22 0 2 5 0000000000000 222222 2
consensus : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-G---GCAAT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCATATAATG-TAGCTACGAGCAT--AAAATCAT----ATAAAACAA-AATATT-TGAAAGACAG----ATGCA---ATTTATTTT--ATAATAA---ACN---AA-ACAACCT-----GTGGTTG---A-TAGATAGAAAGAA---AG----AAACGAACAAACA-A--------CAT-A-G--TATAACACGGGTTGCCTC-CC--T--T--A--CTTTTGAG--A-----C-GA---C-CC------C---ATATAATGCGTTTCTGAC--CAAA-TCGCGTGAA--------------C----------A-CCG--N---AAAAA-AT-CGAA-CAAG--TGGTG-TT-AAAAA--TCTAATA-T---TTTG-TATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTC-T-G------A-TT--------------TA------A------------A--------A----------A-AAAAG-A-GNA-AAAAA-AT-------AC------ATT--------CGTATA-ATAGCG--TAAACG--TCAAT--AA-AAAAT--------GACTGATTTTCACGAA--CGACGAA--A-GAG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAATAAACAAAGCAAGTA----TACTACCTTTTTAAAGTATTCCAGC--TT-TTCTTTTATTAAT----ATGAATAATTCCGAATCGAAC-GTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATT----------TTTCCCTGCA-TTT-C--AA--A--------------AA-------------ATGGCGGCCAAAATATATTTA--TCGTCG---CTTG----GGACGCT----GAA------GG-------G-GACTA-----TTT-T-A-CCGT-TGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATTACCGTNGTCAACAAANNGAATAACANAGATTATAGAACAAAGTCGTANTAT-CG-GNCT-CACGATCCNC-ATAGAAGGCATTCG
Reference ( gi|2 ) : ACTTGTATTATAATTATATTCATAC-CCATAAAC-A---GCAAT--ATTACACACATGATCA------TAGTTTTTATGATAGTTGCAACAAAAGTATTCCATATAATA-TAGCTACGACTAT--AACATCAT----ATAAAATAA-AATATT-TGAAAGACAG----ATGAAAT-ATTTATTTT--ATAATAA---A-A---AA-ACAACCT-----GTGGTTG---A-TAGATAGAACAAA---AG----AAACGAACAAACA-A--------CAT-A-T--TATAACACGGGTTGCCTC-CC--T--T--A--CTTTTGAA--A-----C-TA---C-CA------C---ATATAATGTGTTTCTGAC--CAAA-TCGCGTGAA--------------C----------A-CCG--A---AAAAA-AT-CGAA-CAAA--TGGTG-TT-AACTA--TCTAATA-T---TTTGGCATGTATTT-CGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGACATACCA--GAAGTTC-T-G------A-TT--------------TA------A------------A--------A----------A-AAAAG-A-GCA-AACAA-ATG------AC------ATT--------CGTATA-ATAGCG--TAAACG--TCAAT--AG-AAAAT--------GACAGATTTTCACGAA--TGACGAA--A-GAG-AAAAGC----ACG-AACATTGGTCTTTGCACGCGTTCAAATCGATATTTTAAATAAACAAAGCAAGAAGA-GTACTCCATTTTTAAAATATTCCAGC-ATT-TTGTTTTATTCAT----ATAAATAATTCCGAATCGAAA-GTCAATCTTAAATCGTGGTATTGAGACCACAATTTAAATT----------TTTCCCT---------------A--------------GA-------------ATGGCGGCC-----ATATTAA--TCGTCA---CTTG----GGACGCT----AAA------GG-------G-GACTA-----TTT-T-A-TCGT-TGCTATACTAATGCGC------TG------TCTGCATTGCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAAAT---CGTG-------AAATGAATAACAAAGATTATAGAATAAAATTGTAATAT-TA-GCCG-CACGATTCCTTATAGAAGGCATTCG
gi|14 : TTATAT-CATAAACCA-ACAC-ATTGACAATCCATCAAATACATGATCACAGACTTAGTTGTTATGTTAGTTGCAACAAA-GTCTTCCACATAATG-TAGCTATGAGTAT--AAAATCAT----ATCAAACAA-AATATT-TGAAAGACAGAGCTATGCA---ATTTATTTT--ATAATAA---ACC---AA-ACAAC-----------------A-TAA--AAAAC-AA---AG----AAACGAATAAACA-A--------CAT-A-G--TATAATACAG
gi|17 : gagctcatgaataaatacagatccaaagactggaagatattttgttacaataatgaaaatatttttataattcaaatagatctaaatgatgatctatggatattttccagttttagctggttatgtcataattgtatacagttgtttctttttttattgtatgccttttCACAT-TCATGAAT-G---GCC-T--ATCAGACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCATATAATG-TAGCTACGAACAT--AAAATCCTACTCATAAAACAA-AATATT-TGAAAGACAG----ATGAA---ATTTATTTTAAATAATAA---ACC---AA-ACAACCTGGAGAGTGGTTG---A-TAGACAG----AA---AG----AAACAAACAAA
gi|15 : tctaaagacaggtaaaagaaattttattataataatggaaaaatattcttttaattcaattataaatggatattttctaattttttagttggtgatgacataactgtatacagtttttattctttttttttattgtatgccttttcaatatcataaaccaaCACAT-TCATGAAT-G---G-ACT--ATCAAACACATGATCA------TAGTGGTTATGTTAGTTGCAACAAAAGTCTTCAATATAAT--TAAC-------AT--AGAAACAT----ATAAAACAA-AATATT-TGAAAAACAG----GTGCA---ATTTATTTT--ATAATAA---A-C---CGTACATCCT-----GTGTCTG---A-TAGATAGAAAGAA---AGAATCAAACAAACAATCA-A--------CAT-A-G--TAAAACATTGGTTGCCTC-CC--TTCT--A--CATTTGAG--A-----T-GA---C-Catag
gi|7 : tctacaggaagattgaaagaaattttgttataataatgaaaatacttttttaattctaaatgtaaatattttagttggtgatgacataactgtatttagttttgattatttttttaaatgcacgcctttttgatatcataaaccaa-CCATGAA--A---GACAC--ATAAAACACATGATCA------T------TATAATAGTTGCAACAAAAGTATTCCATATAATG-TAACTACGAGCAT--AAT-TTAT-------AAATAACAAAATT-TGAAAGACAG----GTGCA---ATTTATTTT--ATAATAACCCA-AAC-AA-ACGACcc
gi|1 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaCATAAACCA---GCA-C--ATT-----CGTGA--A------TACACTTGATCATAGTTGCAACAAAGGTTTTCCATATAATG-TAGCTACGAGCAA--AACATTAT----ATGAAACAA-AATATT-TGAAAGACAG----ATGCAATGATTTTTTTT---TA-TGA---A-CT--AA-ATAACCT-----GTGGTTG---A-TAGATAGTAAGAA---AG----AAACAAACAAACA-AGTTGGGAACAT-AAT--TA-ACCACAAGTTGCCTC-CC--T--TCTA--CTTTTGAG--A-----C-GA---C-CC------C---CCA--ATAT-------------AA-TCGCGTGAA--------------CTTCAACTTTCA-CCA--ACGCAAAAA-TT-CGAA-TAAG--TGGTG-TTTAAAAA--TCTAACA-T---TTTG---TGTATTT-CTTCATTAT-----AGA---TTATACTTTTAATGTAGCAGGTATACTA--AAAGTTC-T-G------A-TTTTATAGCATG----TA------A------------G--------A----------A-AAAAC-A-GTATAAAAA-AAGAAAAAAAC------ATT--------C---------GCG--TAAACG--TCAAT--AA-AATAT--------GACTGATTTTCACGAA--AGACGAA--G-G-----AAGCGACAACA-AAGATGAGTCTTTGCGAGAGTTCAAGTCAATATTTTAAATAATCAAAGAAAGTA----TACTACCTTTTCAAAGTATTGTAG--------G--TTAT---------TAA---------AATCAGAC-GTCAATCTGAAATCGTACTTTTT---------TTTAAA-----------------AA---------------A--------------AA-------------ATGGCGGTCAAAATATATTTA--TCGTCG---CTTG----GGACGCT----GAA-------G-------G-GACTAT----TTT-T-A-TCGT-TGCAATTCTAATGaatgtataacacggattaccactcttctacttttgagacgactcccatataacttgtttcagaccaatgcgtgaaattgcatatttcaccaccacaaaacatcaaacaaacattgttaaaaaaattcaataattttatgttttttcgtcattatagataatactttaaatgtggcaggcatactaggagttcatatagcacatgtatataaaacgaaaaaaaatacattcgtattaaagcacaaacgtcaataaaaaatgactgattttcacgaacgacgaaagaggtaagcgataacgaa
gi|12 : tgtaacattttcagatagtttcgattcattattgttttatttaggtctatattccaatcattttaaaaatcaattgtatacattttcaaaatgaagaacaaatgattttttttcattacagttaatgaaaattattaattgcacttactaattcaatgttaacaccatgaaccatgaatatttgttggctacataattgttttattgactgttatagaaaaaacagatctaaagacatttataatttttagttggtgatgacataactgtatacagttttgattctttttttattgtatgccattttggtat--ATCAAACCCACGATCA------TTGATGCTATTTTAGTTGCAACAGAAGTCCTCCATAT-ATAGTAGTAACGACCAC--AAAATCAT----ATAAAACAA-AATATT-TGAAAGACAG----ATGAA---ATCTATTTT--ATAATAA---ACA---GA-ACAACTT-----GTGGTTA---A-TAGATAG----AA---AG----AAACGAACAAACA-A--------CGT-A-G--TATAACAAGGGTTGCTTC-AC--TTGT--A--CGTTTGAG--A-----C-GACCCC-CA------C---AT
gi|11 : actaatgaactcataatacagatcgaaaggtagatacaaaaaatggttacaataatgaaattattttttaattcaaatagatgatgatctatgaatactttttagttggtgatgacataattgtatacagttttttttttttttttttttttttcattttttattttattaaccaacacatttatgaccaCATGACAA------TAGTTGCTATGTTAGTTGCAACAGATGTCTTCCATATAATG-TAGTTACGACCAT--TAAATAAT----ATAAAACTA-AATATT-TGAAAGACAG----ATGAA---ATTCCTTTT--ATAAT-------A---AA-CCAA--------ATGAT-----A-TAGATAGAAAGAA---AA----AATTGAACAAACA-A--------CATGA-TAGTATAACATGGGTTGCCTC-ACTTT--T--A--CTCTTAAG--A-----CATC---C-CC------C---ATAT
gi|24 : accaatgagctcatggatacagatcgaaagacaaatagaaaatcattttggtataataatgaaactattttttaattcaaatagatgatgatctatggataatttttagtttgtgatgacataattgtatacagttttgtttctttgtttttttattgtatgcctttatgatataaaaaaaaccaacacattgataacccgtcaattgATAGTTGCAACAAAAG-----------------GCTACGA-------ACATCAT----ATAAAACAA-AACATT-TGAAAGTGAG----ATG
gi|16 : aaacacatgttCAAATAATG-TAGCTACGCGCAT--GAAATCAT----ATAAAACAA-AATATT-TGAAAGACAG----ATGCAAT--T---TTTT--A-AATAAT--A-ATTCAA-ACATCCT-----GTGGTTG---A-TAGATAGAAAAAA---TG----AAA--AAAAAACA-A--------CAT-A-A--TATAACATGGGTTGtaggaaagcacaaacattggcctttgcgcgagttcaaaacaatagtttgatcaacatagaaagtatacttactacctttttaaagtaatccagcttttcttttattaatataaatccctaaatcgttgtattgggaccacaattttaatttttccctacattttataaaaacaaatggcggcaaaca
gi|5 : taggtctatttttttttatcatcttcaattgtatgcatatttaaactgaagaatagaagatttttttttcaattacagttaacgaaaattattaattgcacttactgattcaatgttaatatcataaaccatccatatttgttggttacagttttgatgctttttcttgttgtatgcctttttgatatcataaaccaacacattcatgtcttcaatgaAATG-TAGTTACGACCATTAAACA-CAT----ATAAAACAA-A-TACTGTGAAAGACAG----ATGA--T--TTTATTTA--AAAATCA---A-CC--AA-ACAACCT-----TTGGTTG---A-TAGATAAAAAGAA---AG----AAACGAACAAACA-C--------CAT-A-G--TATAACACTGATTGCTTT-AT--T--T--ATACTTTTGAG--A-----CGTG---T-CC------C---ATATAATGCATTTCTAAC--CAAAATCGTACGAA--------------C----------A-CCGCAA---AAAAA-ACGCGAG-CAAG--TGGTG-TT-AAAAAG-TCTAGTA-T---TTTGA-ATGTATTT-CGTTGTTAT-----AGA---TAATGCTTTAAATATGGCAGACATACTAAAGAAGTTT-T-G------A-TT--------------TT------A------------A--------A----------A-CACAT-ATACA-AA----ATG-------C------ATT---------ATATACAT-TCG--TTAACG--TCAAA--AG-TAAAT--------GACCGATTTTCACAAA--TAGCGAA--A-GAG-AAAAGC----ACA-AACATTGACCGTT--ACG-GTTCAAGTCGATACTTTGAATAAACATAGCACGTA----TACTACCTTTTTAAAGTATTCCAGC-CTT-TCGTTT-ATTTAT----ATGTATAATTCCGAATCGAAC-GTCAATCTGAAATCGTAGTACTGGGACCACAAATTCAATT----------TT-CACT---------------A--------------CATTTTATAACAACAATGGCGGCC-----ATATTAT--TAGTCG---CTTA----GGCCGCC----GAA------GG-------GAGAGGG-----GT----A-CCGT-TGCTAT
gi|4 : -ATTTAAATT--ATAATAA---ACA---AA-A------------------------AGA---AATAAACCTAG----AAA-G---AAAGA-A--------CAT-A-G--TATAACAC-GGTTGGCTCACT--T--T--A--CATTTGAG--ATGACCC-CA---C-CATTATGGC---ATATAATGCGTTTCTGAC--CAAA-TCGCGTGAAG-------------C----------AGCAA--A---AAAAA-AT-C-AA-CAAA--AGGTGTTT-AAAAA--GCTGAAA-T---TTT-ATATGTTTTT-CGTCGTTAC-----AGA---TAATACTTTAAATGTGGCAGACATACTA--GAAGTTC-A-A------ATTT--------------TA------AAGTAAATGTAT-A--------A----------A-AAAAG-A--CA-A--AA-AC-------AC------ATT--------CGTATA-ATAGCG--TAAATT--TCAAT--AA-AAAAT--------GACATATTTTCACGAA--TGGCGAA--A-GAGAAAAAGC----AT--AGCGTTTACCTTTGTGCAAGTTCAAATCGATATTTTGAATAAATAAAGCAAGTA----TACTACCTTTTTAAACTATTCCAGC--CT-TTCTTTTATTAATATTCATGAATAATTCCTAATTGAAT-GTCAATCTGAAATTTTGTTATTGAGCCCACTATTT-AATT----------TTTCCCT---------------ACATTTTATCAAAACAA-------------ATGACGGCC-----ATATTAA--TCGTCG---TTTG----GGACACT----TCA------GG-------A-AAATA-----TTT-T-A-cataa
gi|40 : CCT-----GCGGTTG---A-TGGATAGAA-------AG----CAA-GAACAA-CA-A------------A-C--TATAACACGAGTTGCCTC-AC--TTAT--A--CTTTTGAG--A-----C-GAC--C-CC------C---ATATcaaatgcgcagttaaagggtgggaacctacgtgcatgtgacataggttctccctcttgcagtagtcatttgc
gi|8 : TGGTTGCCAACTAGATAGAA-------AG----AAATAAACAAACATA--------C-T-A-G--TATAACACTGATTGCCTC-TC--TC-C--A--CTT
gi|7 : tCAAACAAACG-A--------CA--A-TG-TATAACACGGATTACCAC-TC--T--TCTA--CTTTTGAG--A-----C-GA---CTCC------C---ATATAACTTGTTTCAGAC--CAA---TGCGTGAAATTGCATATTTCACC----------A-CCA--C---AAAAC-AT-CAAA-CAAA--CATTG-TT-AAAAAAATTCAATAAT---TTT---ATGTTTTTTCGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GGAGTTCAT-ATAGCACA-TG--------------TA------T------------A--------T----------A-AAACG-A---A-AAAAA-AT-------AC------ATT--------CGTATT-AAAGCA--CAAACG--TCAAT--AA-AAAAT--------GACTGATTTTCACGAA--CGACGAA--A-GAG-GTAAGCGATAACG-AAcaccgcaaaagcatcgaacaagtagtgttaaaaaactaaaattttgtatgtttttcgtcattgtagatactactttaaatgtggcaggcatacttgaagttctgattgtatagcacaagtgtggaaaaagaaaaaaaattacctccgtttaaaagcgtaaaagtcaataataaattacttattttcacaaaatacgaatccgtaaaataaacgaacatttgtctttgctcgagttcaaatcgatattttaataaacaaagcaaacatgctacccttttatagtattttagcctttcttttattaatatgaataattccgaatcgaacgatactctgaaaccgtggtatttagaccataatttcgattactgtctgcattttacaaaaaaaaatatggctgccaaaatatatttatcgtcactttgaacgctgaatgagtggggaactatttttaccgttgctatattaatgcgcagtagttgtttgattttaatgt
gi|28 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaccatgaaagacacataaaacacatgatcattataatagttgcaacaaaagtattccatataatgtaactacgagcataatttataaataacaaaatttgaaagacaggtgcaatttattttataataaccA-A--------CAT-A-G--TATAACACAGTTTGCCTC-CC--T--CC-A--CTTTCAGATGA-----C------C-CC------C---ATATAATGTGTTTCTGACTACAAA--------AA--------------C----------A-CTGC-A---AAAAA-AT-CAAAACAAG--TGGTG-TTGAAAAA--TCTAATA-T---TTTG-TATGTGTTT-TGTCGTTATTATATAAA---TAAAACTTTAAATGTGGCAGGCATTCTA--GAAGTTC-T-G------A-TT--------------T
gi|3 : T-A-G--TATAACACGTGTTGCCTC-CC--TTCT--A--CTTTTGAG--A-----C-GA---C-CC------CTCAATGTAATGTGTTTCTGACTTCAA---CAC-------------------C----------A-CCG--C---AAAAA-A---AAA-CGAG--TTGTG-TTAAAAAA--TCTAATA-T---TTTGA-ATTT-TTT-TGTCATTGT-----AGA---AAATATTTGAAATATGGCGGG-ATGCTA--GAAGTTC-T-G------A-TT--------------TT------A------------T--------A----------G-CACAT---GTA-TAAAA-AC-------AC------ATT--------CGTATA-ATAGCG--TAAACG--TCAATAAAA-AAAAT--------GACTGATCTTTA-GAA--TGACGAA--A-AGG-AAA--C----AAGAAACATTAACCTTTGCGTGT-TTCAtacagcacatgtataaaaag
gi|30 : T-A-G--TATAACATGTGTTGCCTC-CC--T--TCCA--CTTTTGAG--A-----T-GAC--C-CC------C---AT-TAAAATGTTTC-GAC--------------AC--------------C----------A-CCA--C---AACAA-AT-CAAA-CAAG--TGGTG-TTAAAAGA--TCTAATA-T---TTT-GTATGTTTTT-CGTCATTAT-----AGA---TAATACTTTAAAATTGGCAGGTATACTA--GAAGTTC-T-G------A-TT--------------ccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|9 : --TATAACATGGGTTGGCTC-CCTTT--T--A--CTTTTGAG--A-----gtatagcacatgtataaaaaac
gi|8 : acag--------------C----------A-CCG--C---AAAAGCAT-CGAA-CAAG--TAGTG-TT-AAAAA--ACTAAAA-T---TTTG-TATGTTTTT-CGTCATTGT-----AGA---TACTACTTTAAATGTGGCAGGCATACTT--GAAGTTC-T-G------A-TTG-------------TATAGCACA------------AGTGTG---G----------A-AAAAG-A---A-AAAAA-ATT------AC------CTC--------CGTTTA-AAAGCG--TAAAAG--TCAAT--AA-TAAAT--------TACTTATTTTCACAAA--ATACGAATCC-GTA-AAATAA----ACG-AACATTTGTCTTTGCTCGAGTTCAAATCGATATTTT-AATAAACAAAGCAAACA----TGCTACCCTTTTATAGTATTTTAGC--CT-TTCTTTTATTAAT----ATGAATAATTCCGAATCGAAC-GATACTCTGAAACCGTGGTATTTAGACCATAATTTCGATTACTGTCTGCATTTTACA---------------A--------------AAAAAAAT-------ATGGCTGCCAAAATATATTTA--TCGTCA---CTTT----GAACGCT----GAATGAGTGGG-------G-AACTAT----TTT-T-A-CCGT-TGCTATATTAATGCGC------AG------Ttgttttgagacttttgtatgtttttcgtcgttaaagataatacttcaaatgtggcaagcatactagaagttctaattttaaagtaaatgtataaaaaaagaaaaaaaacacatttgtataataacgtaaatgtcaataaaaaatgacattttcgcgaaagagaaaagcacaacggtgacctttgctcgagttaaaattgatattttgaataaataaagcaagtatactacctttttaaagtattccagcctttctttaattaatataaatacttctgaatggaatgttaatctgaaattgtggtattgagcccacaatttcaattttaccctgcattttaccaaaacaaatggcagccatattaatcatcgtttgggatgcttcagggaactattttacttatgtgcagtagtgcgcgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
gi|6 : ttggttgccaactagatagaaagaaataaacaaacatactagtataacactgattgcctctctccactt---AAAAA-CT-CGAA-CAAAAGTGATG-TT-AAAAAA-TCTAATA-A---TTTG-TATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGCGACAGGCATACAA--GAAGTTC-T-G------A-TT--------------TT------ACAGCACATGTATG--------A----------A-AAAAG-A-CTA-AA-AA-CT--------C------ATT--------CGTATA-AAAGCG--TAAACG--TCAAT--A--AAAAT--------GACTTATTTTTATAAA--AGACGAAC-A-CGG-AAAATA----ATA-AACATTTGTCTTTGCGCGAGTTCACATTGACATTTTGAATAAACAAAGCAAGTA----TACTATCTTTTTAAAGTTTTCCAGC-CTT-TC--TTTATCAAT----ATAAATAATTCCGAAACGAAC-GTCAATTTAAAACCGTGGTATTGAAACCACAACTCAATTT----------TTTACCTGCAATTTCCAAAA--A--------------AA-------------ATGGCTGCCAAAATATATTTA--TCGTCA---CTTG----GGACACTGAAAGAA------GG-------G-GACTA-----TTTCT-A-CCGT-TGCTATATTTATGAGCAGTAGTCG------TTTGAATTTCATGTagttgtttgattttaatgt
gi|10 : -TT-AAAAA--TCTAATA-T---TTTG-TATGTGTTT-TGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAAGCCTACTA--GAAGTTC-TCA------A-TT--------------TA------T------------AGCATATGTA----------T-AATAA-A-GGA-AA-AA-AT-------AC------ATT--------CGTACG-ATAGCG--TAAATG--TCAAT--A--AAAAT--------GACTAATTT-CACGAA--C-------------------------CG-CACATTGCCCTTTGCGTGAGTCCAAATTGATATTTTAAATAAACAAAGCAAGTA----TACTACCTTTTTAAAGTACTCCAG--GCT-TTCTTGTATTAAT----ATAAATAATTCCAAATTGATC-ATCAATCCAAAATCATAGTATTGAGACCACAAATTCAATT----------TTCTCCTGCATTTTACAAAA--A--------------AA-------------ATGGTAGCCAAAATATATTTA--TTTTTG---CTTC----GGACACT----GAA-------G-------G-GATTA-----TTT--------T-TGCTATACTAATGCAC------Taatttttgtgtaaactgtatgatttgactaccacatacttgaagtttttgactctctgttagatagaacaaaaatcgcaatacaaatttggatttctacgtcttctgctattgcaatagagctaaact
gi|21 : A--TCTAATA-TATATTT------TTTTT-TTTTTTTAT-----AGA---TAGTACTTTAAATGTGGCAGGCATACCAG-GAAGTTT-T-G------ATTT--------------TA------T------------A--------G----------C-ACATGTA-TAA-AACAACAAC------AC------AT-----------TATT-ATAGCG--TAAACG--TCAAT--AATGAAAT--------GACTGATTTTCACAAA--CGtttaactgtagtcatccacaattcatgtcattt
gi|32 : ttgatgtatattaactaaaatgcaataagattattatctaaaaatgtgtatttattgatatttaaaagttattttgcattttaaaatatttgttactgaaaaaaA--TCTAATA-T---TTTG-TATGT-TTT-CGTCGTTAT-----AGAAGGTAATACGTTAAATGTTGAAGGTATATAA--CAAGTTC-T-G------A-TTGTATGGCACAAGTATG------A------------A--------A----------ATAAAAG-A---A-AACA-----------AC------ATA--------TGTATA-ATAGCT--TAAACG--ATAAT--CA-AAAGT--------GACA-ATTTtttnnnnnnnnnnatacaacatcagtgatcttgctcctgaaatacacaattaacatgagtaa
gi|38 : aaA--TCGAATA-T---TTTG-TATGGTTTT-C-TCGTTAT-----AGAAGATAATACTTTGAATGTGGCAGGTACACCc
gi|9 : gcagactgagagatcaacgttttctgaaaaA-C---TTTTGTATGTTTTT-CGTCGTTAA-----AGA---TAATACTTCAAATGTGGCAAGCATACTA--GAAGTTC-T-A------A-TT--------------TT------A------------A--------AGTAAATGTATA-AAAAA-A-GAA-AAAAA-AC-------AC------ATT--------TGTATA-ATAACG--TAAATG--TCAAT--AA-AAAAT--------GACA--TTTTCGCGAA-----------A-GAG-AAAAGC----AC--AACGGTGACCTTTGCTCGAGTTAAAATTGATATTTTGAATAAATAAAGCAAGTA----TACTACCTTTTTAAAGTATTCCAGC-CTT-TC-TTTAATTAAT----ATAAATACTTCTGAATGGAAT-GTTAATCTGAAATTGTGGTATTGAGCCCACAATTTCAATT----------TTACCCT---------------GCATTTTACCAAAACAA-------------ATGGCAGCC-----ATATTAA--TCATCG---TTTG----GGATGCT----TCA------GG-------G-AACTA-----TTT-T-ACTTATGTGC---AGTAGTGCGC------tatt
gi|13 : acagtataacatgggttggctcccttttacttttgagatgttttgag--------------TA------A------------A--------A----------A-AAAAG-A-AGA-AAAAA-AT-------ACTTTATAATTATATAAAACGTAAA-ATTACG--TAAACG--TGAAT--CG-AAAAT--------GACTGATTTCCACAAA--CGACGAA--ACGGG-TGAACC----ACA-ATCAGTGGCCTTTGCGCGGTTTCAAA-CGATATTTTGAATGAACAAAGCAAGTGTA-TTACTTAATT----AAAGATTCCAGC-ATT-C--TTTTATTGAT----TTTAATATTGCCGAAT-GAAACGTCAATCTGAAATCGTGGTATTGAACCCATAATTTCATGT----------TTCCCCTGCGTTTTAACCAA--A--------------AA-------------ATGGCGACC-----AAAATAGATTTATCAAAGCTTG----AGACGCTG---AAA------GC-------G-GACTAC----TTT-C-A-CCGT-TTCTATgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
gi|18 : tttatagcacattta--------A----------A-AAAAA-A-CCA-GACAA-C--------AT------ATA--------CATATA-AAAGCA--TTAACA--TTAAT--CG-AAAAT--------GACTGATTTTCACGAA--CGACGAA--A-GAG-A-----------------------TTT-CA-GAG---AAATCGATATTTCGAATAAACAAAGCAAGTTCA-ACACTGCA-----AGAGTATTTTAAT-CTT-TTTTTTTATTAAT----ATGAGT-ATTTCTAATCGAAT-ATCAAACTGAAATTGCGGTACTGAGATCACAAgtagggttgcgtactaaaatgatcgtgtgggtcctggctg
gi|23 : tatagatgcaattatataaatacacacttagcacacgctaagatcagactttatagcacatataatataaaaaacacacacACAG-CTT------AC------ATT--------TATATT-A-AGCGATTTACCGAATCGAT--TA-AAAATATCATCTGGACTGATTTTCATGAA--CGACGAA--A-GAG-GTAAGC----TCA-AACATTGTCCTTTGCGCGAGTAAAAATCGATATATTGAA-AAAAAAAGCAAGTA----TACTACA-TTTTAAAGTAGTTAA---ATTATTCTTTGGTTAAT----ATGAATAaatccaaacccaaggaaaatgcgactacaatatatcatttcagcacgg
gi|34 : gatgttttgtattgtgacatgtgatgttgccgtcaatgtaatcatgtagaaggtcattatgcatatgaatattaaaattT--------CGTATA-ATTGCG--TAAACG--TCAAT--TA-ATAATT-------GACATATTTTCATGAA--TTACGAA--A-GAG-AAATGC----ACA-GA-GTTGACCTTTGTGTGAGTTCATCTCATTATTTTGAAGAAACAAAGCAAGTA----TACTACCTTTTc
gi|19 : CG--TAAATG--TAAA---AA-AAAAT--------GACTTATTTTCATGAA--TGATGAAC-A-CAG-AAAAA-----ACA-AACATTGGCCTTTGTGCTTATTCAAGTAAGTATTTTGAATATACAAAGCAAGTA----CACTACCTTTTTAAAGTATGCTAACCATC-TT---TAATTAAT----ATAAATAATTCCGAATTGAAT-GTCAATCTGAAACCATGGTTTTGAGATCATAATTTCAATT----------TTCCCCTGCATTTCACAAAAAAA--------------GAAAT----------ATGGCTGCCAAAATATATTTA--TCGTCA---CTTG----AGATGCT----AAA------AGATGGGCTG-GAATAT----TTT-T-A-CAGT-TGCT
gi|24 : AACA--TCA-T--AT-AAAAC--------AAAACATTT----GAAAGTGA-GAT--G-TAG-GAAAGC----ACA-AACATTGGCCTTTGCGCGAGTTCAAAACAATAGTTT-GATCAACATAGAAAGTATACTTACTACCTTTTTAAAGTAATCCAGC--TT-TTCTTTTATTAAT----ATAAAT---------------------CCCTAAATCGTTGTATTGGGACCACAATTTTAATT----------TTTCCCT---------------A--------------gatgtgcagtagttgtttgaattt
gi|3 : aaacacatgttatagttgcaacaaaaggctacgT-TTCTTTAATTAAT----ATAAATAATTCCGAATTGAAC-GTCAATCTGAAATCGTTGTATTGAGACCACAGTTTCAATT----------TGTCCCTACATTTTACCAAA--A--------------AA-------------ATTGTGGCCCAAATATATTGA--TCGTCG---CCTG----GGCCGCT----GAA------Gcattttataaaaacaaatggcggcaaaca
gi|20 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccc-----ATATTTA--TAGTTG---CTCATAATGAACGCT----AA----------------G-GACTACTACTTTT-T-A-GCAT-TGCTAAACTAATGTGCAGTAGTTG------TCTGCATTCAATGTttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|37 : gtcaaaatTATTTA--TCGTCA---CT------GAAGG------AGG------GA-------G-GACTA-----TTT-TTA-CCGA-TACTATACTTAAGCGC------GGTAGTCATTTGAATTTCATGTcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaatgaaattaccgtcaacagaataacaaagattagagaacaaaatcgtactttgggactcatgatcacaatagaaggcattcgctgtgttccgcttccaaaa
gi|20 : caaaatgATGAAATTACCGTC-------AACAGAATAACAAAGATTAGAGAACAAAATCGTACTTT-GG-GACT-CATGA-TCACAATAGAAGGCATTCGcattttagtggaagctg
gi|25 : gtcaaaatatatttatagttgctcataatgaacgctaaggactactactttttagcattgctaaactaatgtgcagtagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaAAAT---CGTGGTCAACAAAATAAAAAAAAAAGATT---GAACAAA-TT-TAATATACA-GGCAACATGATCCCT-ATAGAAGGC-TTCGctgtgttccgcttccaaaa
gi|3 : tcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAACACAGATTATAGAACAAGGTCATAAAAG-T--GCCT-CACGA-TCGCTGTAGAAGGTA
gi|35 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtATTACACAGGTTATATAACAAA-TTGTACT-T-TGTGTCC-CACCATCACT-ATAGAAGGTATTCcgctacgataacactacgctagcctttcaataaa
11 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|22 ): TCGGCCTCGTTATTGATTTAAAACTGTTTACAACTAAAATTCTGTAACACTTTCAGATATTTTGGATCGTTTTTGTTTTTATTTAGGTCTATTTTTTCATCATCTTAAAAATCAATTGTATGCATTGTCAAAATGAAGAACAAATGATTTTTTTTTCAATTACAGTTAATGAAAATTGTTAATTTCACTTACTGATTCAATGTTAACACCATAAACCAGTCATAATTGTCGGTTACAGATTGTTTTTAGTGAATGATTATAAAAAACACACAAAAAAAACCACAAAAAAACCCCA
Unaligned ( gi|26 ): GTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATCGCCGCCCACAGTATAACAAAATTAATAGAACAAAACCATAAATGCCCATCATGATCACTATAAA
Unaligned ( gi|27 ): ATTTCATGCCTTCTTGGAATATTAATATAGATTTCTCAGTCAATCGTTTTCCACTGTACTATTATTTAAAATAGTAAAATTATAAATGTTAATTTCACAAAGTTCACAGAAAATAATTATGTTCTCAAATATATTAATATCCATATTATCATATACTCCTGAATAAACCCACTTGGGGGTTGGGGTGGAGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGG
Unaligned ( gi|29 ): TTACCAATGAGCTCATGAATACAGATCGAAAGACAGATAGAAAGAAATTTTGTTATAATGATTTTTTTTAAATGATGATCTATGGATATTCTAATTTTAAGTTGGTGATGACATAATTGTATACATTTTTCTTTTTTATTGTATGTCTGTTTGATATCATAAACCAACGCATAGAAGACCCATCCAACACATTGTA
Unaligned ( gi|31 ): AGTTCTAAAGACAGATAAAAGAAATTTAGTTATGATAATGAAAATATCTCTTTGATTCAATTATATAGATATTTTCTAATTTTGAGTTGATGACGACATAACTGTTTTGATTTATTTTTTTATTGTATGCCTTTTTAATAAAATAAACCAACACATTCATAAATGATCAAACACATGACCATAGTT
Unaligned ( gi|33 ): TGATGTATATTAACTAAAATTAGAGTATATTTATAAATGTATTTTTATAGATATTTAAAAGTTATTTCACATTTTAAATTATTTGTTAATGAAAAAAAGATGTCCTTGACTATTGCACGATGCTCAGGTTATGGTG
Unaligned ( gi|36 ): ATGGTTATCTCTCTCATCATATACAGTAAGATACATGTGCTGTATCCCAGAATAAACGCCCCTGCTGGTAATGCAGGGGGTGTGTGTGTGTGTGGGGGGGGGGGCGGG
Unaligned ( gi|39 ): AATCACAGTCAACAGTACAACAAAGGACATAGAACAAACTCAAACCTCTCACAACGACTATAGAAGGACTCGTTATGGTTTGCCTTCCAA
Unaligned ( gi|41 ): AAATGTATCTTTAAATTTACCAATATAAATAACATACATTTATAAACTAAAAGGCCCTAAAACGTACAACAAAA
Unaligned ( gi|42 ): ATATATAGCTGCGCGCGTGACGTAGGTTCTCCCCCTTGAGTATACTGCACTTCG
Unaligned ( gi|43 ): GAATTTACCAATGAGCTATTGAATACAGATCTCAAGACACATAAAA
Alignments
lowQualScore : 444444444444444 111111 11111 11 11111 11111111 22222 222222222222222 111111 6666666666666666666666666 111 55555555555555555555555555555555555555555555555555555555555555555555555555 11111111 11111111 1111 11 444444444444444444444444444444444444 222222222222222 22222 55555555555555 1111111 4444 1 333333 11 111
lowQualScore : 6 5 333333333333333 444444 0 11 1 00000 3 6 3 7777 3 7777 5 11 55 1 00000 7777 99999 3 11111111 555 2 2 77 66666 33 777 3 555555555555555 5 3 444444 2222222222222222222222222 1 4 555 1 4 55 9 5 99 444 2 2 66666 999 66 2 2 888888 2 88888888888888888888888888888888888888888888888888888888888888888888888888 2 44444444 666 777777 99999999 2 2 33 33 2 333 2 00000000 55 3 88 5 2 2 1 0 0000 88 0 1 66666 444 777 5555 2 2 00 6666 1 2 0 0 0 3 2 0 3 1 3 777777777777777777777777777777777777 2 6666 6666 000000000000000 3 55555 3 0 0 00000000000000 9999999 0 4444 1 1 11 1 6 1 333333 1 22 8 333 0
lowQualScore : . . ............... ...... . .. . ..... . . . .... . .... . .. .. . ..... .... ..... . ........ ... . . .. ..... .. ... . ............... . . ...... ......................... . . ... . . .. . . .. ... . . ..... ... .. . . ...... . .......................................................................... . ........ ... ...... ........ . . .. .. . ... . ........ .. . .. . . . . . .... .. . . ..... ... ... .... . . .. .... . . . . . . . . . . . .................................... . .... .... ............... . ..... . . . .............. ....... . .... . . .. . . . ...... . .. . ... .
lowQualScore : 7 7 444444444444444 444444 4 99 0 00000 5 0 6 7777 6 7777 1 00 55 0 00000 1111 77777 1 22222222 000 5 9 99 44444 99 111 3 000000000000000 0 4 555555 9999999999999999999999999 0 0 000 4 0 55 2 7 66 777 7 7 77777 333 88 9 9 222222 9 88888888888888888888888888888888888888888888888888888888888888888888888888 9 33333333 333 777777 11111111 5 1 22 11 2 777 2 33333333 88 0 44 0 5 5 2 3 6666 33 3 5 77777 777 333 7777 7 9 11 1111 6 3 8 7 2 7 8 2 1 2 1 111111111111111111111111111111111111 4 5555 5555 555555555555555 3 00000 3 4 5 00000000000000 8888888 8 6666 4 0 44 4 4 0 666666 0 00 0 888 8
consensus : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTC-T-G------A-TT------------T----------A----AA--------A----------A-----AAAA-GAGNA---------AAA-A--------AA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAG-C-CTTTCTTTTATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTAT----TTT-TACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCACCGTCGTCAACAAAATGAATAACAAAGATTATAGAACAAAATCGTAATAT-CGTGNC-NCACGA-TCNCTATAGAAGGCATTCG
Reference ( family-2882 ) : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGAGCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACNAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGNAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTC-T-G------A-TT------------T----------A----AA--------A----------A-----AAAA-GAGNA---------AAA-A--------AA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAG-C-TTTTCTTTTATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA-----TTT-TACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATTACCGTNGTCAACAAANNGAATAACANAGATTATAGAACAAAGTCGTANTAT-CG-GNC-TCACGA-TCCNCATAGAAGGCATTCG
gi|1 : TAGTTGCAACAAAGGTTTTCCAT-----ATAATGTAGCTACGAGCAAAACAT-TAT----ATGAAACAAAATATT-TGAAAGACAG----ATGCAATGATTTTTTT--TTA-TGAACTAAATAACCT-----GTGGTTGATAGATAGTAAGAAAG----AAAC----AAACAAACA-AGTTGGGAAC---ATAAT-TAACCACAAGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCCCAA-----------TATAATCGCGT----GAACTT--CAAC-TTTC---AC--------------CAACGCAAAAA-T---TCGAA-TAA--GTGGTGTTTAAAA-A--TCTAACAT---TTT-GTGTATTTCT---TCATTAT-----AGA---TTATACTTTTAATGTAGCAGGTATACTA--AAAGTTC-T-G------A-TT------------TTATAGCATGTA----AG--------A----------A-----AAAA-CAGTATAAAAAAAGAAA-A--------AA---AC------ATT--------CG---------CG--TAAACG--TCA-AT--AA-AATAT--------GACTGATTTTCACGAAAGACGAA--G-G------AAGCGACAACA-AAGATGAGTCTTTGCGAGAGTTCAAGTCAATATTTTAAAT-----AATCAAAGAAAGT---A---TACT----A-CCTTTTCAAAGTATTGTAG---------GTTATTAA------------------AATCAGACGTCAATCTGAAATCGT---------------ACTT---TTTTT----TAA-A---------------A----A--A----AA--------ATGGCGGTCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA-------G-------G-GACTAT----TTT-TATCGTTGCAATTCTAATG
gi|10 : tgtaacattttcagatagtttcgattcattattgttttatttaggtctatattccaatcattttaaaaatcaattgtatacattttcaaaatgaagaacaaatgattttttttcattacagttaatgaaaattattaattgcacttactaattcaatgttaacaccatgaaccatgaatatttgttggctacataattgttttattgactgttatagaaaaaacagatctaaagacatttataatttttagttggtgatgacataactgtatacagttttgattctttttttattgtatgccattttggtatcataaaccagcacattcgtgaatacacttgatcaTT-AAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAAGCCTACTA--GAAGTTC-TCA------A-TT------------T----------A----TAGCATATGTA----------T-----AATA-AAGGA---------AAA-A--------A--T-AC------ATT--------CGTACG-ATAGCG--TAAATG--TCA-AT--AA-AAA-T--------GACTAATTT-CACGAAC--------------------------CG-CACATTGCCCTTTGCGTGAGTCCAAATTGATATTTTAAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTACTCCAG-G-CTTTCTTGTATTAAT----ATAAATAATTCCAAATTGATCATCAATCCAAAATCATAGTATTGAGACCACAAATTCAATTTTCT-CCTGC-ATT---T----TACAAA----A--A----AA--------ATGGTAGCCAAAATATATTTATTTTTGCTTC----GGACACT----GAA-------G-------G-GATTA-----TTT------TTGCTATACTAATGCAC------T-------TTTAA
gi|11 : TCAATTGCATGACAA------TAGTTGCTATGTTAGTTGCAACAGATGTCTTCCAT-----ATAATGTAGTTACGACCATTAAAT-AAT----ATAAAACTAAATATT-TGAAAGACAG----ATGAAAT--TCCTTTT--ATAATAAACCAAA------------TGAT--ATAGATAGAAAGAAAA----AATT----GAACAAACA-A--------CATGATAGTATAAC-ATGGGTTGCCTC-ACTTT--T--A--CTCTTAAGACATC-C-CCC---A-----------TATctgtagtcatccacaattcatgtcattt
gi|12 : accaatgagctcatggatacagatcgaaagacaaatagaaaatcattttggtataataatgaaactattttttaattcaaatagatgatgatctatggataatttttagtttgtgatgacataattgtatacagttttgtttctttgtttttttattgtatgcctttatgatataaaaaaaaccaacacattgataacccg-CACAT-TTATGACC-----A--------ATCAAACCCACGATCA------TTGATGCTATTTTAGTTGCAACAGAAGTCCTCCAT-----ATATAGTAGTAACGACCACAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--CTATTTT--ATAATAAACAGAACAACTT-----GTGGTTAATAGAT----AGAAAG----AAAC----GAACAAACA-A--------C---GTAGTATAAC-AAGGGTTGCTTC-AC--TTGT--A--CGTTTGAGACG-A-C-CCC---
gi|13 : actaatgaactcataatacagatcgaaaggtagatacaaaaaatggttacaataatgaaattattttttaattcaaatagatgatgatctatgaatactttttagttggtgatgacataattgtatacagttttttttttttttttttttttttcattttttattttattaaccaa------------T----------A----AA--------A----------A-----AAAA-GAAGA---------AAA-A--------AA-T-ACTTTATAATTATATAAAACGTAAA-ATTACG--TAAACG--TGA-AT--CG-AAAAT--------GACTGATTTCCACAAACGACGAA--ACG-GG-TGAACC----ACA-ATCAGTGGCCTTTGCGCGGTTTCAAA-CGATATTTTGAAT-----GAACAAAGCAAGT---G---TATT----A-CTTAATTAAAG-ATTCCAG-C--ATTCTTTTATTGAT----TTTAATATTGCCGAATGAAACGTCAATCTGAAATCGTGGTATTGAACCCATAATTTCATGTTTCC-CCTGC-GTT---TTAACC----A----A--A----AA--------ATGGCGACCAAAATAGATTTATCAAAGCTTG----AGACGCT----GAA------AGC------G-GACTAC----TTT-CACCGTTTCTATcacat
gi|14 : tttatagcacatttaTTATAT-CATAAACCA---ACACATTGACA-ATCCATCAAATACATGATCACAGACTTAGTTGTTATGTTAGTTGCAACAAA-GTCTTCCAC-----ATAATGTAGCTATGAGTATAAAAT-CAT----ATCAAACAAAATATT-TGAAAGACAGAGCTATGCAAT--TTATTTT--ATAATAAACCAAACAAC--------------ATA---AAAAACAAAG----AAAC----GAATAAACA-A--------C---ATAGTATAAT-ACAGgtagggttgcgtactaaaatgatcgtgtgggtcctggctg
gi|15 : gagctcatgaataaatacagatccaaagactggaagatattttgttacaataatgaaaatatttttataattcaaatagatctaaatgatgatctatggatattttccagttttagctggttatgtcataattgtatacagttgtttctttttttattgtatgcctttt-CACAT-TCATGAAT-----GG-A-CT--ATCAAACACATGATCA------TAGTGGTTATGTTAGTTGCAACAAAAGTCTTCAAT-----ATAAT-----TA---ACATAGAAA-CAT----ATAAAACAAAATATT-TGAAAAACAG----GTGCAAT--TTATTTT--ATAATAAACCGTACATCCT-----GTGTCTGATAGATAGAAAGAAAGAATCAAAC----AAACAATCA-A--------C---ATAGTAAAAC-ATTGGTTGCCTC-CC--TTCT--A--CATTTGAGATG-A-C-CCC---
gi|16 : tctacaggaagattgaaagaaattttgttataataatgaaaatacttttttaattctaaatgtaaatattttagttggtgatgacataactgtatttagttttgattatttttttaaatgcacgcctttttgatatcataaaccaaGTCTTCAATGACAAATAATGTAGCTACGCGCATGAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTTTTAA--ATAATAATTCAAACATCCT-----GTGGTTGATAGATAGAAAAAATG----AAA------AAAAAACA-A--------C---ATAATATAAC-ATGGGTTG
gi|17 : taggtctatttttttttatcatcttcaattgtatgcatatttaaactgaagaatagaagatttttttttcaattacagttaacgaaaattattaattgcacttactgattcaatgttaatatcataaaccatccatatttgttggttacagttttgatgctttttcttgttgtatgcctttttgatatcataaaccaacacattcat-CACAT-TCATGAAT-----GGCC--T--ATCAGACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGAACATAAAAT-CCTACTCATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--TTATTTTAAATAATAAACCAAACAACCTGGAGAGTGGTTGATAGACAGAAAGAAAC----AAAC----AAA
gi|18 : tctaaagacaggtaaaagaaattttattataataatggaaaaatattcttttaattcaattataaatggatattttctaattttttagttggtgatgacataactgtatacagtttttattctttttttttattgtatgccttttcaatatcataaaccaa----------A----AA--------A----------A-----AAAC-CAGAC---------AAC-A--------TA-T-AC------AT------------ATA-AAAGCA--TTAACA--TTA-AT--CG-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-A-----------------------TTT-CA-GAG---AAATCGATATTTCGAAT-----AAACAAAGCAAGTTCAA---CACT----G-CA-----AGAGTATTTTAATC-TTTTTTTTTATTAAT----ATGAGTA-TTTCTAATCGAATATCAAACTGAAATTGCGGTACTGAGATCACAA----AA----TC-CAAAC-------C----C----A----AGGA----AA--------AT-GCGACTACAATATATatag
gi|19 : tatagatgcaattatataaatacacacttagcacacgctaagatcagactttatagcacatataatataaaaaacacacacCG--TAAATG--TAA-A---AA-AAAAT--------GACTTATTTTCATGAATGATGAAC-A-C-AG-AAAAA-----ACA-AACATTGGCCTTTGTGCTTATTCAAGTAAGTATTTTGAAT-----ATACAAAGCAAGT---A---CACT----A-CCTTTTTAAAGTATGCTAA-C--CATCTTTAATTAAT----ATAAATAATTCCGAATTGAATGTCAATCTGAAACCATGGTTTTGAGATCATAATTTCAATTTTCC-CCTGC-ATT---T----C----AC---A--A----AAAAAGAAATATGGCTGCCAAAATATATTTATCGTCACTTG----AGATGCT----AAA------AGATGGGCTG-GAATAT----TTT-TACAGTTG-----CTGATGTGCAGTAGTTG------TTTGAATTTcatttcagcacgg
gi|2 : TTATATTCATAC-CCATAAAC-----AGCA-AT--ATTACACACATGATCA------TAGTTTTTATGATAGTTGCAACAAAAGTATTCCAT-----ATAATATAGCTACGACTATAACAT-CAT----ATAAAATAAAATATT-TGAAAGACAG----ATGAAATATTTATTTT--ATAATAAA-AAAACAACCT-----GTGGTTGATAGATAGAACAAAAG----AAAC----GAACAAACA-A--------C---ATATTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAAACT-A-C-CAC---A-----------TATAAT-GTGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGAAAAAA-A---TCGAA-CAA--ATGGTGTT-AACT-A--TCTAATAT---TTTGGCATGTATTT-CGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGACATACCA--GAAGTTC-T-G------A-TT------------T----------A----AA--------A----------A-----AAAA-GAGCA---------AAC-A--------AA-TGAC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AG-AAAAT--------GACAGATTTTCACGAATGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGTCTTTGCACGCGTTCAAATCGATATTTTAAAT-----AAACAAAGCAAGA---AGAGTACT----C-CATTTTTAAAATATTCCAG-CATTTTGTTTTATTCAT----ATAAATAATTCCGAATCGAAAGTCAATCTTAAATCGTGGTATTGAGACCACAATTTAAATTTTTC-CCT---------------------------A----GA--------ATGGCGGCC-----ATATTAATCGTCACTTG----GGACGCT----AAA------GG-------G-GACTA-----TTT-TATCGTTGCTATACTAATGCGC------TG------TCTGCATTGCATGT
gi|2 : acttgtattataaAAATGAATAACAAAGATTATAGAATAAAATTGTAATAT-TA-GCC-GCACGATTCCTTATAGAAGGCATTCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgaaatgaataacaaagattatagaataaaattgtaatattagccgcacgattccttatagaaggcattcg
gi|20 : acttgtattataattatattcatacccataaacagcaatattacacacatgatcatagtttttatgatagttgcaacaaaagtattccatataatatagctacgactataacatcatataaaataaaatatttgaaagacagatgaaatatttattttataataaaaaaacaacctgtggttgatagatagaacaaaagaaacgaacaaacaacatattataacacgggttgcctcccttacttttgaaactaccacatataatgtgtttctgaccaaatcgcgtgaacaccgaaaaaaatcgaacaaatggtgttaactatctaatattttggcatgtatttcgtcattatagataatactttaaatgtggcagacataccagaagttctgatttaaaaaaaaagagcaaacaaatgacattcgtataatagcgtaaacgtcaatagaaaatgacagattttcacgaatgacgaaagagaaaagcacgaacattggtctttgcacgcgttcaaatcgatattttaaataaacaaagcaagaagagtactccatttttaaaatattccagcattttgttttattcatataaataattccgaatcgaaagtcaatcttaaatcgtggtattgagaccacaatttaaatttttccctagaatggcggccatattaatcgtcacttgggacgctaaaggggactattttatcgttgctatactaatgcgctgtctgcattgcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgGTCAAAATATATTTATAGTTGCTCATAATGAACGCT----AA----------------G-GACTACTACTTTT-TAGCATTGCTAAACTAATGTGC------AG------T
gi|20 : ATGAAATTACCGT---CAACA----GAATAACAAAGATTAGAGAACAAAATCGTACTTT-GG-GAC-TCATGA-TCACAATAGAAGGCATTCGagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaatgaaattaccgtcaacagaataacaaagattagagaacaaaatcgtactttgggactcatgatcacaatagaaggcattcgctgtgttccgcttccaaaa
gi|21 : gtcaaaatatatttatagttgctcataatgaacgctaaggactactactttttagcattgctaaactaatgtgcagtagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaa-AAAA-A--TCTAATATATATTT-TTTTTTTTTT------TTAT-----AGA---TAGTACTTTAAATGTGGCAGGCATACCAG-GAAGTTT-T-G------ATTT------------T----------A----TA--------G----------C-----ACAT-GTATA---------AAACAAC------AA-C-AC------AT-----------TATT-ATAGCG--TAAACG--TCA-AT--AATGAAAT--------GACTGATTTTCACAAACGctgtgttccgcttccaaaa
gi|23 : ttgatgtatattaactaaaatgcaataagattattatctaaaaatgtgtatttattgatatttaaaagttattttgcattttaaaatatttgttactgaa-T-AC------ATT--------TATATT-A-AGCGATTTACCGAATCG-AT--TA-AAAATATCATCTGGACTGATTTTCATGAACGACGAA--A-G-AG-GTAAGC----TCA-AACATTGTCCTTTGCGCGAGTAAAAATCGATATATTGAA------AAAAAAAGCAAGT---A---TACT----A-CA-TTTTAAAGTAGTTAAA-T-TATTCTTTGGTTAAT----ATGAATAtttnnnnnnnnnnatacaacatcagtgatcttgctcctgaaatacacaattaacatgagtaa
gi|24 : gatgttttgtattgtgacatgtgatgttgccgtcaatgtaatcatgtagaaggtcattatgcatatgaatattaaaattacagctTGTTAT---AGTTGCAACAAAAG---------------------GCTACGAACAT------CAT----ATAAAACAAAACATT-TGAAAGTGAG----ATGTAc
gi|24 : aaacacaAACA--TCATAT--AA-AACAA--------AAC--ATTT----GAAAG-TGAG--ATGTAG-GAAAGC----ACA-AACATTGGCCTTTGCGCGAGTTCAAAACAATAGTTTGA-T-----CAACATAGAAAGT---A---TACTTACTA-CCTTTTTAAAGTAATCCAG-C-TTTTCTTTTATTAAT----ATAAA----TCC---------------CT-AAATCGTTGTATTGGGACCACAATTTTAATTTTTC-CCTAC-ATT---T----T----AT---A--AAAACAA--------ATGGCGGCAAAggaaagcacaaacattggcctttgcgcgagttcaaaacaatagtttgatcaacatagaaagtatacttactacctttttaaagtaatccagcttttcttttattaatataaatccctaaatcgttgtattgggaccacaattttaatttttccctacattttataaaaacaaatggcggcaaaca
gi|25 : aaacacatgttatagttgcaacaaaaggctacgATCGTGGTCAACAAAATAAAAAAAAAAGATT---GAACAAATT--TAATATACA-GGCAACATGA-TCCCTATAGAAGGC-TTCGca
gi|28 : tcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaA-A--------C---ATAGTATAAC-ACAGTTTGCCTC-CC--T--CC-A--CTTTC-AGATG-A-C-CCCC--A-----------TATAAT-GTGTTTCTGA---CTACAAA--------AA--------------CACTGCAAAAA-AA--TCAAAACAA--GTGGTGTTGAAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTATTATATAAA---TAAAACTTTAAATGTGGCAGGCATTCTA--GAAGTTC-T-G------A-TT------------T----------
gi|3 : TAGTATAAC-ACGTGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCTCAA-----------TGTAAT-GTGTTTCTGA---CTTCAA---CAC-------------------CACCGCAAAAA-A-----AAA-CGA--GTTGTGTT-AAAA-AA-TCTAATAT---TTT-GAAT-TTTTT-TGTCATTGT-----AGA---AAATATTTGAAATATGGCGGG-ATGCTA--GAAGTTC-T-G------A-TT------------T----------T----AT--------A----------G-----CACA-T-GTA---------TAA-A--------AA-C-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-ATAAAA-AAAAT--------GACTGATCTTTA-GAATGACGAA--A-A-GG-AAA--C----AAGAAACATTAACCTTTGCGTGtacagcacatgtataaaaag
gi|3 : GATCTTTAGAATGACGAAAAGGAAACAAGA---AA--CATT----AACCTTTGC---GTGTTTCAC-C-CTTTCTTTAATTAAT----ATAAATAATTCCGAATTGAACGTCAATCTGAAATCGTTGTATTGAGACCACAGTTTCAATTTGTC-CCTAC-ATT---T----TACCAA----A--A----AA--------ATTGTGGCCCAAATATATTGATCGTCGCCTG----GGCCGCT----GAA------Gtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|3 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactGAAAT---CGCCGCCAACA----GTATAACACAGATTATAGAACAAGGTCATAAAA---GTGCC-TCACGA-TCGCTGTAGAAGGTATttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|30 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaTAGTATAAC-ATGTGTTGCCTC-CC--T--TCCA--CTTTTGAGATG-ACC-CCC---A-----------T-TAAA-ATGTTTC-GA---C--------------AC--------------CACCACAACAA-A---TCAAA-CAA--GTGGTGTT-AAAAGA--TCTAATAT---TTT-GTATGTTTTT-CGTCATTAT-----AGA---TAATACTTTAAAATTGGCAGGTATACTA--GAAGTTC-T-G------A-TT------------cgctacgataacactacgctagcctttcaataaa
gi|31 : -CACAT-TCATAAAT-----G--------ATCAAACACATGACCA------TAGTTgtatagcacatgtataaaaaac
gi|32 : agttctaaagacagataaaagaaatttagttatgataatgaaaatatctctttgattcaattatatagatattttctaattttgagttgatgacgacataactgttttgatttatttttttattgtatgcctttttaataaaataaaccaaAA-A--TCTAATAT---TTT-GTATGTTTT--CGTCGTTAT-----AGAAGGTAATACGTTAAATGTTGAAGGTATATAA--CAAGTTC-T-G------A-TTG-----------T----------ATGGCAC--------A----------AGTATGAAAA-TAAAA---------GAA-A--------AC-A-AC------ATA--------TGTATA-ATAGCT--TAAACG--ATA-AT--CA-AAAGT--------GAC-AATTT
gi|34 : T--------CGTATA-ATTGCG--TAAACG--TCA-AT--TA-ATAATT-------GACATATTTTCATGAATTACGAA--A-G-AG-AAATGC----ACA-GA-GTTGACCTTTGTGTGAGTTCATCTCATTATTTTGAAG-----AAACAAAGCAAGT---A---TACT----A-CCTTTTc
gi|35 : ATGAAATCAC---TGTCAGCA----GTATTACACAGGTTATATAACAAA-TTGTACT-T-TGTGTC-CCACCA-TCACTATAGAAGGTATTC
gi|37 : ttgaaacgtttggaactattttatcaggcggtggaaCAAAATGTATTTATCGTCACT-------GAAG------GAG------GGA------G-GACTAT----TTT-TACCGATACTATACTTAAGCGC------GGTAGTCATTTGAATTTCATGTac
gi|38 : -AAAA-A--TCGAATAT---TTT-GTATGGTTTT-C-TCGTTAT-----AGAAGATAATACTTTGAATGTGGCAGGTACACcattttagtggaagctg
gi|4 : gcagactgagagatcaacgttttctgTAATAAACAAAAAGAAAT----AAACCTAGAAAGAAAGA-A--------C---ATAGTATAAC-ACGG-TTGGCTCACT--T--T--A--CATTTGAGATG-A-C-CCC---ACCATTATGGCATATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAAG-------------CAGCAAAAAAA-AA--TC-AA-CAA--AAGGTGTTTAAAA-A--GCTGAAAT---TTT-ATATGTTTTT-CGTCGTTAC-----AGA---TAATACTTTAAATGTGGCAGACATACTA--GAAGTTC-A-A------A-TT------------T----------T----AA--------A----------G-----TAAATGTATA---------AAA-AAAGACAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAATT--TCA-AT--AA-AAAAT--------GACATATTTTCACGAATGGCGAA--A-G-AGAAAAAGC----AT--AGCGTTTACCTTTGTGCAAGTTCAAATCGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAACTATTCCAG-C-CTTTCTTTTATTAATATTCATGAATAATTCCTAATTGAATGTCAATCTGAAATTTTGTTATTGAGCCCACTATTT-AATTTTTC-CCTAC-ATTTTAT----C----A----A--AAC--AA--------ATGACGGCC-----ATATTAATCGTCGTTTG----GGACACT----TCA------GG-------A-AAATA-----TTT-TAC-------A----AATGCGC------AG------TTctatt
gi|40 : atttaaattaCCT-----GCGGTTGATGGATAGAAAGCAAG----AA-C-----AACAAAC-------------------TATAAC-ACGAGTTGCCTC-AC--TTAT--A--CTTTTGAGACG-ACC-CCC---A-----------TATaaagggtgggaacctacgtgcatgtgacataggttctccctcttgcagtagtcatttgc
gi|5 : AATGTAGTTACGACCATTAAACACAT----ATAAAACAAA-TACTGTGAAAGACAG----ATG-ATT--TTATTTA--AAAATCAACCAAACAACCT-----TTGGTTGATAGATAAAAAGAAAG----AAAC----GAACAAACA-C--------C---ATAGTATAAC-ACTGATTGCTTT-AT--T--T--ATACTTTTGAGACGTG-T-CCC---A-----------TATAAT-GCATTTCTAA---C--CAAAATCGTACGAA--------------CACCGCAAAAA-AAACGCGAG-CAA--GTGGTGTT-AAAA-AG-TCTAGTAT---TTT-GAATGTATTT-CGTTGTTAT-----AGA---TAATGCTTTAAATATGGCAGACATACTAAAGAAGTTT-T-G------A-TT------------T----------T----AA--------A----------A-----CACA-TAT-----------ACA-A--------AA-T-GC------ATT---------ATATACAT-TCG--TTAACG--TCA-AA--AG-TAAAT--------GACCGATTTTCACAAATAGCGAA--A-G-AG-AAAAGC----ACA-AACATTGACCGTTACG---GTTCAAGTCGATACTTTGAAT-----AAACATAGCACGT---A---TACT----A-CCTTTTTAAAGTATTCCAG-C-CTTTCGTTTATTTAT----ATGTATAATTCCGAATCGAACGTCAATCTGAAATCGTAGTACTGGGACCACAAATTCAATTTT-C-ACTAC-ATT---T----T----ATAACA--A----CA--------ATGGCGGCCATATTAT---TA--GTCGCTTA----GGCCGCC----GAA------GG-------GAGAGGG-----GT---ACCGTTGCTAT
gi|6 : AAAAA-C---TCGAA-CAAAAGTGATGTT-AAAAAA--TCTAATAA---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGCGACAGGCATACAA--GAAGTTC-T-G------A-TTTTACAGCACATGT----------A----TG--------A----------A-----AAAA-GACT-----------AA-A--------AA-C-TC------ATT--------CGTATA-AAAGCG--TAAACG--TCA-AT---A-AAAAT--------GACTTATTTTTATAAAAGACGAAC-A-C-GG-AAAATA----ATA-AACATTTGTCTTTGCGCGAGTTCACATTGACATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-TCTTTTTAAAGTTTTCCAG-C-CTTTC-TTTATCAAT----ATAAATAATTCCGAAACGAACGTCAATTTAAAACCGTGGTATTGAAACCACAA-CTCAATTTTTTACCTGCAATT---T----CCAA-A----A--A----AA--------ATGGCTGCCAAAATATATTTATCGTCACTTG----GGACACTGAAAGAA------GG-------G-GACTA-----TTTCTACCGTTGCTATATTTATGAGCAGTAGTCG------TTTGAATTTCATGTcataa
gi|7 : -CCATGAAA-----GACACAT--A--AAACACATGATCA------T------TATAATAGTTGCAACAAAAGTATTCCAT-----ATAATGTAACTACGAGCAT-AATT-TAT----AAATAACAAA--ATT-TGAAAGACAG----GTGCAAT--TTATTTT--ATAATAACCCAAACAAaatttttgtgtaaactgtatgatttgactaccacatacttgaagtttttgactctctgttagatagaacaaaaatcgcaatacaaatttggatttctacgtcttctgctattgcaatagagctaaact
gi|7 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaC----AAACAAACG-A--------C---AATGTATAAC-ACGGATTACCAC-TC--T--TCTA--CTTTTGAGACG-A-CTCCC---A-----------TATAAC-TTGTTTCAGA---C--CAA---TGCGTGAAATTGCATATTTCACCACCACAAAAC-A---TCAAA-CAA--ACATTGTT-AAAA-AAATTCAATAA---TTT--TATGTTTTTTCGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GGAGTTCAT-ATAGCACA-TG------------T----------A----TA--------T----------A-----AAAC-GA--A---------AAA-A--------AA-T-AC------ATT--------CGTATT-AAAGCA--CAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-GTAAGCGATAACG-AAacgacaatgtataacacggattaccactcttctacttttgagacgactcccatataacttgtttcagaccaatgcgtgaaattgcatatttcaccaccacaaaacatcaaacaaacattgttaaaaaaattcaataattttatgttttttcgtcattatagataatactttaaatgtggcaggcatactaggagttcatatagcacatgtatataaaacgaaaaaaaatacattcgtattaaagcacaaacgtcaataaaaaatgactgattttcacgaacgacgaaagaggtaagcgataacgaa
gi|8 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaccatgaaagacacataaaacacatgatcattataatagttgcaacaaaagtattccatataatgtaactacgagcataatttataaataacaaaatttgaaagacaggtgcaatttattttataataaccTGGTTGCCAACTAGATAGAAAG----AAAT----AAACAAACATA--------C----TAGTATAAC-ACTGATTGCCTC-TC--TC-C--A--CTT
gi|8 : t--------------CACCGCAAAAGCA---TCGAA-CAA--GTAGTGTT-AAAA-A--ACTAAAAT---TTT-GTATGTTTTT-CGTCATTGT-----AGA---TACTACTTTAAATGTGGCAGGCATACTT--GAAGTTC-T-G------A-TTG-----------T----------ATAGCAC--------A----------AGTGTGGAAA-AAGAA---------AAA-A--------AATT-AC------CTC--------CGTTTA-AAAGCG--TAAAAG--TCA-AT--AA-TAAAT--------TACTTATTTTCACAAAATACGAATCC-G-TA-AAATAA----ACG-AACATTTGTCTTTGCTCGAGTTCAAATCGATATTTT-AAT-----AAACAAAGCAAAC---A---TGCT----A-CCCTTTTATAGTATTTTAG-C-CTTTCTTTTATTAAT----ATGAATAATTCCGAATCGAACGATACTCTGAAACCGTGGTATTTAGACCATAATTTCGATTACTG-TCTGC-ATT---TTA--C----A----A--A----AAAAAAT---ATGGCTGCCAAAATATATTTATCGTCACTTT----GAACGCT----GAATGAGTGGG-------G-AACTAT----TTT-TACCGTTGCTATATTAATGCGCAGTAGTTG------TTTGATTTTAATGTcaccgcaaaagcatcgaacaagtagtgttaaaaaactaaaattttgtatgtttttcgtcattgtagatactactttaaatgtggcaggcatacttgaagttctgattgtatagcacaagtgtggaaaaagaaaaaaaattacctccgtttaaaagcgtaaaagtcaataataaattacttattttcacaaaatacgaatccgtaaaataaacgaacatttgtctttgctcgagttcaaatcgatattttaataaacaaagcaaacatgctacccttttatagtattttagcctttcttttattaatatgaataattccgaatcgaacgatactctgaaaccgtggtatttagaccataatttcgattactgtctgcattttacaaaaaaaaatatggctgccaaaatatatttatcgtcactttgaacgctgaatgagtggggaactatttttaccgttgctatattaatgcgcagtagttgtttgattttaatgt
gi|9 : ttggttgccaactagatagaaagaaataaacaaacatactagtataacactgattgcctctctccactt---ACAGTATAAC-ATGGGTTGGCTC-CCTTT--T--A--CTTTTGAGATG-
gi|9 : T---TTT-GTATGTTTTT-CGTCGTTAA-----AGA---TAATACTTCAAATGTGGCAAGCATACTA--GAAGTTC-T-A------A-TT------------T----------T----AA--------AGTAAATGTATA-----AAAA-AAGAA---------AAA-A--------AA-C-AC------ATT--------TGTATA-ATAACG--TAAATG--TCA-AT--AA-AAAAT--------GAC--ATTTTC-------GCGAA--A-G-AG-AAAAGC----AC--AACGGTGACCTTTGCTCGAGTTAAAATTGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAG-C-CTTTCTTTAATTAAT----ATAAATACTTCTGAATGGAATGTTAATCTGAAATTGTGGTATTGAGCCCACAATTTCAATTTTAC-CCTGC-ATT---TTAC-C----A----A--AAC--AA--------ATGGCAGCC-----ATATTAATCATCGTTTG----GGATGCT----TCA------GG-------G-AACTA-----TTT-TACTTATG-TGCAGTAGTGCGC------ttttgagacttttgtatgtttttcgtcgttaaagataatacttcaaatgtggcaagcatactagaagttctaattttaaagtaaatgtataaaaaaagaaaaaaaacacatttgtataataacgtaaatgtcaataaaaaatgacattttcgcgaaagagaaaagcacaacggtgacctttgctcgagttaaaattgatattttgaataaataaagcaagtatactacctttttaaagtattccagcctttctttaattaatataaatacttctgaatggaatgttaatctgaaattgtggtattgagcccacaatttcaattttaccctgcattttaccaaaacaaatggcagccatattaatcatcgtttgggatgcttcagggaactattttacttatgtgcagtagtgcgcgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
10 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): TCGGCCTCGTTATTGATTTAAAACTGTTTACAACTAAAATTCTGTAACACTTTCAGATATTTTGGATCGTTTTTGTTTTTATTTAGGTCTATTTTTTCATCATCTTAAAAATCAATTGTATGCATTGTCAAAATGAAGAACAAATGATTTTTTTTTCAATTACAGTTAATGAAAATTGTTAATTTCACTTACTGATTCAATGTTAACACCATAAACCAGTCATAATTGTCGGTTACAGATTGTTTTTAGTGAATGATTATAAAAAACACACAAAAAAAACCACAAAAAAACCCCA
Unaligned ( gi|26 ): GTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATCGCCGCCCACAGTATAACAAAATTAATAGAACAAAACCATAAATGCCCATCATGATCACTATAAA
Unaligned ( gi|27 ): ATTTCATGCCTTCTTGGAATATTAATATAGATTTCTCAGTCAATCGTTTTCCACTGTACTATTATTTAAAATAGTAAAATTATAAATGTTAATTTCACAAAGTTCACAGAAAATAATTATGTTCTCAAATATATTAATATCCATATTATCATATACTCCTGAATAAACCCACTTGGGGGTTGGGGTGGAGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGG
Unaligned ( gi|29 ): TTACCAATGAGCTCATGAATACAGATCGAAAGACAGATAGAAAGAAATTTTGTTATAATGATTTTTTTTAAATGATGATCTATGGATATTCTAATTTTAAGTTGGTGATGACATAATTGTATACATTTTTCTTTTTTATTGTATGTCTGTTTGATATCATAAACCAACGCATAGAAGACCCATCCAACACATTGTA
Unaligned ( gi|33 ): TGATGTATATTAACTAAAATTAGAGTATATTTATAAATGTATTTTTATAGATATTTAAAAGTTATTTCACATTTTAAATTATTTGTTAATGAAAAAAAGATGTCCTTGACTATTGCACGATGCTCAGGTTATGGTG
Unaligned ( gi|36 ): ATGGTTATCTCTCTCATCATATACAGTAAGATACATGTGCTGTATCCCAGAATAAACGCCCCTGCTGGTAATGCAGGGGGTGTGTGTGTGTGTGGGGGGGGGGGCGGG
Unaligned ( gi|39 ): AATCACAGTCAACAGTACAACAAAGGACATAGAACAAACTCAAACCTCTCACAACGACTATAGAAGGACTCGTTATGGTTTGCCTTCCAA
Unaligned ( gi|41 ): AAATGTATCTTTAAATTTACCAATATAAATAACATACATTTATAAACTAAAAGGCCCTAAAACGTACAACAAAA
Unaligned ( gi|42 ): ATATATAGCTGCGCGCGTGACGTAGGTTCTCCCCCTTGAGTATACTGCACTTCG
Unaligned ( gi|43 ): GAATTTACCAATGAGCTATTGAATACAGATCTCAAGACACATAAAA
Alignments
lowQualScore : 444444444444444 111111 11111 11 11111 11111111 22222 222222222222222 111111 6666666666666666666666666 111 6666666666666666666666666666666666666666666666666666666 111111111111 11111111 1111 444444444444444444444444444444444444 222222222222222 55555555555555 7777777777777 4444444
lowQualScore : 6 5 333333333333333 444444 0 11 1 00000 1 1 3 7777 3 7777 5 11 55 00000 7777 99999 3 11111111 555 2 2 77 66666 33 777 3 555555555555555 5 3 444444 2222222222222222222222222 4 888 1 4 55 9 5 99 444 2 2 66666 999 66 2 2 888888 2 8888888888888888888888888888888888888888888888888888888 3 777777777777 2 33 666 777777 99999999 2 2 33 33 2 333 2 00000000 55 3 88 5 2 2 1 0 0000 88 0 1 66666 444 777 5555 2 2 1 2 6666 1 2 0 0 0 3 2 0 3 1 3 777777777777777777777777777777777777 2 6666 6666 000000000000000 3 99999 2 0 00000000000000 0000000000000 5 7777 2222222 1 888 5 1 3
lowQualScore : . . ............... ...... . .. . ..... . . . .... . .... . .. .. ..... .... ..... . ........ ... . . .. ..... .. ... . ............... . . ...... ......................... . ... . . .. . . .. ... . . ..... ... .. . . ...... . ....................................................... . ............ . .. ... ...... ........ . . .. .. . ... . ........ .. . .. . . . . . .... .. . . ..... ... ... .... . . . . .... . . . . . . . . . . . .................................... . .... .... ............... . ..... . . .............. ............. . .... ....... . ... . . .
lowQualScore : 7 7 444444444444444 444444 4 99 0 00000 0 5 6 7777 6 7777 1 00 55 00000 1111 77777 1 22222222 000 5 9 99 44444 99 111 3 000000000000000 0 4 555555 9999999999999999999999999 0 000 4 0 55 2 7 66 777 7 7 77777 333 88 9 9 222222 9 3333333333333333333333333333333333333333333333333333333 5 555555555555 9 99 333 777777 11111111 5 1 22 11 2 777 2 33333333 88 0 44 0 5 5 2 3 6666 33 3 5 77777 777 333 7777 7 9 6 9 1111 6 3 8 7 2 7 8 2 1 2 1 111111111111111111111111111111111111 4 5555 5555 555555555555555 3 55555 4 4 00000000000000 7777777777777 7 4444 7777777 0 999 7 0 7
consensus : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTC-T-G------A-TT------------T----------A----AA--------A----------A-----AAAANAGNA---------AAA-A--AA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTC---AACA-A-TGNATAACAAAGATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
Reference ( family-2882 ) : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTC-T-G------A-TT------------T----------A----AA--------A----------A-----AAAAGAGNA---------AAA-A--AA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCACCGTCGTCAACAAAATGAATAACAAAGATTA-TAGAACAAAATCGTAATAT-CGTGNC--NCACGA-TCNCTATAGAAGGCATTCG
gi|1 : TAGTTGCAACAAAGGTTTTCCAT-----ATAATGTAGCTACGAGCAAAACAT-TAT----ATGAAACAAAATATT-TGAAAGACAG----ATGCAATGATTTTTTT--TTA-TGAACTAAATAACCT-----GTGGTTGATAGATAGTAAGAAAG----AAAC----AAACAAACA-AGTTGGGAAC---ATAAT-TAACCACAAGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCCCAA-----------TATAATCGCGT----GAACTT--CAAC-TTTC---AC--------------CAACGCAAAAA-T---TCGAA-TAA--GTGGTGTTTAAAA-A--TCTAACAT---TTT-GTGTATTTCT---TCATTAT-----AGA---TTATACTTTTAATGTAGCAGGTATACTA--AAAGTTC-T-G------A-TT------------TTATAGCATGTA----AG--------A----------A-----AAAACAGTATAAAAAAAGAAA-A--AA---AC------ATT--------CG---------CG--TAAACG--TCA-AT--AA-AATAT--------GACTGATTTTCACGAAAGACGAA--G-G------AAGCGACAACA-AAGATGAGTCTTTGCGAGAGTTCAAGTCAATATTTTAAAT-----AATCAAAGAAAGT---A---TACT----A-CCTTTTCAAAGTATTGTAG--------GTT-ATTAA------------------AATCAGACGTCAATCTGAAATCGT---------------ACTT---TTTTT----TAA-A---------------A----A--A----AA--------ATGGCGGTCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA-------G-------G-GACTA----TTTTTATCGTTGCAATTCTAATG
gi|10 : tgtaacattttcagatagtttcgattcattattgttttatttaggtctatattccaatcattttaaaaatcaattgtatacattttcaaaatgaagaacaaatgattttttttcattacagttaatgaaaattattaattgcacttactaattcaatgttaacaccatgaaccatgaatatttgttggctacataattgttttattgactgttatagaaaaaacagatctaaagacatttataatttttagttggtgatgacataactgtatacagttttgattctttttttattgtatgccattttggtatcataaaccagcacattcgtgaatacacttgatcaTT-AAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAAGCCTACTA--GAAGTTC-TCA------A-TT------------T----------A----TAGCATATGTA----------T-----AATAAAGGA---------AAA-A--A--T-AC------ATT--------CGTACG-ATAGCG--TAAATG--TCA-AT--AA-AAA-T--------GACTAATTT-CACGAAC--------------------------CG-CACATTGCCCTTTGCGTGAGTCCAAATTGATATTTTAAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTACTCCAGG-CTTTCTTGT-ATTAAT----ATAAATAATTCCAAATTGATCATCAATCCAAAATCATAGTATTGAGACCACAAATTCAATTTTCT-CCTGC-ATT---T----TACAAA----A--A----AA--------ATGGTAGCCAAAATATATTTATTTTTGCTTC----GGACACT----GAA-------G-------G-GATTA----TTT------TTGCTATACTAATGCAC------T-------TTTAA
gi|11 : TCAATTGCATGACAA------TAGTTGCTATGTTAGTTGCAACAGATGTCTTCCAT-----ATAATGTAGTTACGACCATTAAAT-AAT----ATAAAACTAAATATT-TGAAAGACAG----ATGAAAT--TCCTTTT--ATAATAAACCAAA------------TGAT--ATAGATAGAAAGAAAA----AATT----GAACAAACA-A--------CATGATAGTATAAC-ATGGGTTGCCTC-ACTTT--T--A--CTCTTAAGACATC-C-CCC---A-----------TATctgtagtcatccacaattcatgtcattt
gi|12 : accaatgagctcatggatacagatcgaaagacaaatagaaaatcattttggtataataatgaaactattttttaattcaaatagatgatgatctatggataatttttagtttgtgatgacataattgtatacagttttgtttctttgtttttttattgtatgcctttatgatataaaaaaaaccaacacattgataacccg-CACAT-TTATGACC-----A--------ATCAAACCCACGATCA------TTGATGCTATTTTAGTTGCAACAGAAGTCCTCCAT-----ATATAGTAGTAACGACCACAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--CTATTTT--ATAATAAACAGAACAACTT-----GTGGTTAATAGAT----AGAAAG----AAAC----GAACAAACA-A--------C---GTAGTATAAC-AAGGGTTGCTTC-AC--TTGT--A--CGTTTGAGACG-A-C-CCC---
gi|13 : actaatgaactcataatacagatcgaaaggtagatacaaaaaatggttacaataatgaaattattttttaattcaaatagatgatgatctatgaatactttttagttggtgatgacataattgtatacagttttttttttttttttttttttttcattttttattttattaaccaa------------T----------A----AA--------A----------A-----AAAAGAAGA---------AAA-A--AA-T-ACTTTATAATTATATAAAACGTAAA-ATTACG--TAAACG--TGA-AT--CG-AAAAT--------GACTGATTTCCACAAACGACGAA--ACG-GG-TGAACC----ACA-ATCAGTGGCCTTTGCGCGGTTTCAAA-CGATATTTTGAAT-----GAACAAAGCAAGT---G---TATT----A-CTTAATTAAAG-ATTCCAGC-A-TTCTTTT-ATTGAT----TTTAATATTGCCGAATGAAACGTCAATCTGAAATCGTGGTATTGAACCCATAATTTCATGTTTCC-CCTGC-GTT---TTAACC----A----A--A----AA--------ATGGCGACCAAAATAGATTTATCAAAGCTTG----AGACGCT----GAA------AGC------G-GACTA----CTTTCACCGTTTCTATcacat
gi|14 : tttatagcacatttaTTATAT-CATAAACCA---ACACATTGACA-ATCCATCAAATACATGATCACAGACTTAGTTGTTATGTTAGTTGCAACAAA-GTCTTCCAC-----ATAATGTAGCTATGAGTATAAAAT-CAT----ATCAAACAAAATATT-TGAAAGACAGAGCTATGCAAT--TTATTTT--ATAATAAACCAAACAAC--------------ATA---AAAAACAAAG----AAAC----GAATAAACA-A--------C---ATAGTATAAT-ACAGgtagggttgcgtactaaaatgatcgtgtgggtcctggctg
gi|15 : gagctcatgaataaatacagatccaaagactggaagatattttgttacaataatgaaaatatttttataattcaaatagatctaaatgatgatctatggatattttccagttttagctggttatgtcataattgtatacagttgtttctttttttattgtatgcctttt-CACAT-TCATGAAT-----GG-A-CT--ATCAAACACATGATCA------TAGTGGTTATGTTAGTTGCAACAAAAGTCTTCAAT-----ATAAT-----TA---ACATAGAAA-CAT----ATAAAACAAAATATT-TGAAAAACAG----GTGCAAT--TTATTTT--ATAATAAACCGTACATCCT-----GTGTCTGATAGATAGAAAGAAAGAATCAAAC----AAACAATCA-A--------C---ATAGTAAAAC-ATTGGTTGCCTC-CC--TTCT--A--CATTTGAGATG-A-C-CCC---
gi|16 : tctacaggaagattgaaagaaattttgttataataatgaaaatacttttttaattctaaatgtaaatattttagttggtgatgacataactgtatttagttttgattatttttttaaatgcacgcctttttgatatcataaaccaaGTCTTCAATGACAAATAATGTAGCTACGCGCATGAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTTTTAA--ATAATAATTCAAACATCCT-----GTGGTTGATAGATAGAAAAAATG----AAA------AAAAAACA-A--------C---ATAATATAAC-ATGGGTTG
gi|17 : taggtctatttttttttatcatcttcaattgtatgcatatttaaactgaagaatagaagatttttttttcaattacagttaacgaaaattattaattgcacttactgattcaatgttaatatcataaaccatccatatttgttggttacagttttgatgctttttcttgttgtatgcctttttgatatcataaaccaacacattcat-CACAT-TCATGAAT-----GGCC--T--ATCAGACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGAACATAAAAT-CCTACTCATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--TTATTTTAAATAATAAACCAAACAACCTGGAGAGTGGTTGATAGACAGAAAGAAAC----AAAC----AAA
gi|18 : tctaaagacaggtaaaagaaattttattataataatggaaaaatattcttttaattcaattataaatggatattttctaattttttagttggtgatgacataactgtatacagtttttattctttttttttattgtatgccttttcaatatcataaaccaa----------A----AA--------A----------A-----AAACCAGAC---------AAC-A--TA-T-AC------AT------------ATA-AAAGCA--TTAACA--TTA-AT--CG-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-A-----------------------TTT-CA-GAG---AAATCGATATTTCGAAT-----AAACAAAGCAAGTTCAA---CACT----G-CA-----AGAGTATTTTAAT-CTTTTTTTTTATTAAT----ATGAGTA-TTTCTAATCGAATATCAAACTGAAATTGCGGTACTGAGATCACAA----AA----TC-CAAAC-------C----C----A----AGGA----AA--------AT-GCGACTACAATATATatag
gi|19 : tatagatgcaattatataaatacacacttagcacacgctaagatcagactttatagcacatataatataaaaaacacacacCG--TAAATG--TAA-A---AA-AAAAT--------GACTTATTTTCATGAATGATGAAC-A-C-AG-AAAAA-----ACA-AACATTGGCCTTTGTGCTTATTCAAGTAAGTATTTTGAAT-----ATACAAAGCAAGT---A---CACT----A-CCTTTTTAAAGTATGCTAAC-C-ATCTTTA-ATTAAT----ATAAATAATTCCGAATTGAATGTCAATCTGAAACCATGGTTTTGAGATCATAATTTCAATTTTCC-CCTGC-ATT---T----C----AC---A--A----AAAAAGAAATATGGCTGCCAAAATATATTTATCGTCACTTG----AGATGCT----AAA------AGATGGGCTG-GAATA----TTTTTACAGTTG-----CTGATGTGCAGTAGTTG------TTTGAATTTcatttcagcacgg
gi|2 : TTATATTCATAC-CCATAAAC-----AGCA-AT--ATTACACACATGATCA------TAGTTTTTATGATAGTTGCAACAAAAGTATTCCAT-----ATAATATAGCTACGACTATAACAT-CAT----ATAAAATAAAATATT-TGAAAGACAG----ATGAAATATTTATTTT--ATAATAAAA-AAACAACCT-----GTGGTTGATAGATAGAACAAAAG----AAAC----GAACAAACA-A--------C---ATATTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAAACT-A-C-CAC---A-----------TATAAT-GTGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGAAAAAA-A---TCGAA-CAA--ATGGTGTT-AACT-A--TCTAATAT---TTTGGCATGTATTT-CGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGACATACCA--GAAGTTC-T-G------A-TT------------T----------A----AA--------A----------A-----AAAAGAGCA---------AAC-A--AA-TGAC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AG-AAAAT--------GACAGATTTTCACGAATGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGTCTTTGCACGCGTTCAAATCGATATTTTAAAT-----AAACAAAGCAAGA---AGAGTACT----C-CATTTTTAAAATATTCCAGCATTTTGTTTT-ATTCAT----ATAAATAATTCCGAATCGAAAGTCAATCTTAAATCGTGGTATTGAGACCACAATTTAAATTTTTC-CCT---------------------------A----GA--------ATGGCGGCC-----ATATTAATCGTCACTTG----GGACGCT----AAA------GG-------G-GACTA-----TTTTATCGTTGCTATACTAATGCGC------TG------TCTGCATTGCATGT
gi|2 : acttgtattataaAAATGAATAACAAAGATTA-TAGAATAAAATTGTAATAT-TA-GCC--GCACGATTCCTTATAGAAGGCATTCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgaaatgaataacaaagattatagaataaaattgtaatattagccgcacgattccttatagaaggcattcg
gi|20 : acttgtattataattatattcatacccataaacagcaatattacacacatgatcatagtttttatgatagttgcaacaaaagtattccatataatatagctacgactataacatcatataaaataaaatatttgaaagacagatgaaatatttattttataataaaaaaacaacctgtggttgatagatagaacaaaagaaacgaacaaacaacatattataacacgggttgcctcccttacttttgaaactaccacatataatgtgtttctgaccaaatcgcgtgaacaccgaaaaaaatcgaacaaatggtgttaactatctaatattttggcatgtatttcgtcattatagataatactttaaatgtggcagacataccagaagttctgatttaaaaaaaaagagcaaacaaatgacattcgtataatagcgtaaacgtcaatagaaaatgacagattttcacgaatgacgaaagagaaaagcacgaacattggtctttgcacgcgttcaaatcgatattttaaataaacaaagcaagaagagtactccatttttaaaatattccagcattttgttttattcatataaataattccgaatcgaaagtcaatcttaaatcgtggtattgagaccacaatttaaatttttccctagaatggcggccatattaatcgtcacttgggacgctaaaggggactattttatcgttgctatactaatgcgctgtctgcattgcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgGTCAAAATATATTTATAGTTGCTCATAATGAACGCT----AA----------------G-GACTACTACTTTTTAGCATTGCTAAACTAATGTGC------AG------T
gi|20 : ATGAAATTACCGTC---AACA----GAATAACAAAGATTA-GAGAACAAAATCGTACT-T-TGGGAC--TCATGA-TCACAATAGAAGGCATTCGagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaatgaaattaccgtcaacagaataacaaagattagagaacaaaatcgtactttgggactcatgatcacaatagaaggcattcgctgtgttccgcttccaaaa
gi|21 : gtcaaaatatatttatagttgctcataatgaacgctaaggactactactttttagcattgctaaactaatgtgcagtagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaa-AAAA-A--TCTAATATATATTT-TTTTTTTTTT------TTAT-----AGA---TAGTACTTTAAATGTGGCAGGCATACCAG-GAAGTTT-T-G------ATTT------------T----------A----TA--------G----------C-----ACATGTATA---------AAACAACAA-C-AC------AT-----------TATT-ATAGCG--TAAACG--TCA-AT--AATGAAAT--------GACTGATTTTCACAAACGctgtgttccgcttccaaaa
gi|23 : ttgatgtatattaactaaaatgcaataagattattatctaaaaatgtgtatttattgatatttaaaagttattttgcattttaaaatatttgttactgaa-T-AC------ATT--------TATATT-A-AGCGATTTACCGAATCG-AT--TA-AAAATATCATCTGGACTGATTTTCATGAACGACGAA--A-G-AG-GTAAGC----TCA-AACATTGTCCTTTGCGCGAGTAAAAATCGATATATTGAA------AAAAAAAGCAAGT---A---TACT----A-CA-TTTTAAAGTAGTTAAAT-TATTCTTTG-GTTAAT----ATGAATAtttnnnnnnnnnnatacaacatcagtgatcttgctcctgaaatacacaattaacatgagtaa
gi|24 : gatgttttgtattgtgacatgtgatgttgccgtcaatgtaatcatgtagaaggtcattatgcatatgaatattaaaattacagctTGTTAT---AGTTGCAACAAAAG---------------------GCTACGAACAT------CAT----ATAAAACAAAACATT-TGAAAGTGAG----ATGTAc
gi|24 : aaacacaAACA--TCATAT--AA-AACAA--------AAC--ATTT----GAAAG-TGAG--ATGTAG-GAAAGC----ACA-AACATTGGCCTTTGCGCGAGTTCAAAACAATAGTTTGA-T-----CAACATAGAAAGT---A---TACTTACTA-CCTTTTTAAAGTAATCCAGC-TTTTCTTTT-ATTAAT----ATAAA----TCC---------------CT-AAATCGTTGTATTGGGACCACAATTTTAATTTTTC-CCTAC-ATT---T----T----AT---A--AAAACAA--------ATGGCGGCAAAggaaagcacaaacattggcctttgcgcgagttcaaaacaatagtttgatcaacatagaaagtatacttactacctttttaaagtaatccagcttttcttttattaatataaatccctaaatcgttgtattgggaccacaattttaatttttccctacattttataaaaacaaatggcggcaaaca
gi|25 : aaacacatgttatagttgcaacaaaaggctacgATCGTGGTCAACAAAATAAAAAAAAAAGATT----GAACAAATT--TAATATACAGGCA--ACATGA-TCCCTATAGAAGGC-TTCGca
gi|26 : tcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaAAATCGCCGCC-----CACAGT--ATAACAAA-ATTAATAGAACAAAACCATAA-----ATGCCCATCATGA-TCACTATAAA
gi|28 : gtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnA-A--------C---ATAGTATAAC-ACAGTTTGCCTC-CC--T--CC-A--CTTTC-AGATG-A-C-CCCC--A-----------TATAAT-GTGTTTCTGA---CTACAAA--------AA--------------CACTGCAAAAA-AA--TCAAAACAA--GTGGTGTTGAAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTATTATATAAA---TAAAACTTTAAATGTGGCAGGCATTCTA--GAAGTTC-T-G------A-TT------------T----------
gi|3 : TAGTATAAC-ACGTGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCTCAA-----------TGTAAT-GTGTTTCTGA---CTTCAA---CAC-------------------CACCGCAAAAA-A-----AAA-CGA--GTTGTGTT-AAAA-AA-TCTAATAT---TTT-GAAT-TTTTT-TGTCATTGT-----AGA---AAATATTTGAAATATGGCGGG-ATGCTA--GAAGTTC-T-G------A-TT------------T----------T----AT--------A----------G-----CACAT-GTA---------TAA-A--AA-C-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-ATAAAA-AAAAT--------GACTGATCTTTA-GAATGACGAA--A-A-GG-AAA--C----AAGAAACATTAACCTTTGCGTGtacagcacatgtataaaaag
gi|3 : GATCTTTAGAATGACGAAAAGGAAACAAGA---AA--CATT----AACCTTTGC---GTGTTTCACC-CTTTCTTTA-ATTAAT----ATAAATAATTCCGAATTGAACGTCAATCTGAAATCGTTGTATTGAGACCACAGTTTCAATTTGTC-CCTAC-ATT---T----TACCAA----A--A----AA--------ATTGTGGCCCAAATATATTGATCGTCGCCTG----GGCCGCT----GAA------Gtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|3 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactGAAATCGCCGCC---AACA----GTATAACACAGATTA-TAGAACAAGGTCATAAAA---GTGCC--TCACGA-TCGCTGTAGAAGGTATttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|30 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaTAGTATAAC-ATGTGTTGCCTC-CC--T--TCCA--CTTTTGAGATG-ACC-CCC---A-----------T-TAAA-ATGTTTC-GA---C--------------AC--------------CACCACAACAA-A---TCAAA-CAA--GTGGTGTT-AAAAGA--TCTAATAT---TTT-GTATGTTTTT-CGTCATTAT-----AGA---TAATACTTTAAAATTGGCAGGTATACTA--GAAGTTC-T-G------A-TT------------cgctacgataacactacgctagcctttcaataaa
gi|31 : -CACAT-TCATAAAT-----G--------ATCAAACACATGACCA------TAGTTgtatagcacatgtataaaaaac
gi|32 : agttctaaagacagataaaagaaatttagttatgataatgaaaatatctctttgattcaattatatagatattttctaattttgagttgatgacgacataactgttttgatttatttttttattgtatgcctttttaataaaataaaccaaAA-A--TCTAATAT---TTT-GTATGTTTT--CGTCGTTAT-----AGAAGGTAATACGTTAAATGTTGAAGGTATATAA--CAAGTTC-T-G------A-TTG-----------T----------ATGGCAC--------A----------AGTATGAAAATAAAA---------GAA-A--AC-A-AC------ATA--------TGTATA-ATAGCT--TAAACG--ATA-AT--CA-AAAGT--------GAC-AATTT
gi|34 : T--------CGTATA-ATTGCG--TAAACG--TCA-AT--TA-ATAATT-------GACATATTTTCATGAATTACGAA--A-G-AG-AAATGC----ACA-GA-GTTGACCTTTGTGTGAGTTCATCTCATTATTTTGAAG-----AAACAAAGCAAGT---A---TACT----A-CCTTTTc
gi|35 : ATGAAATCACTGTC---AGCA----GTATTACACAGGTTA-TATAACAAA-TTGTACT-T-TGTGTC--CCACCA-TCACTATAGAAGGTATTC
gi|37 : ttgaaacgtttggaactattttatcaggcggtggaaCAAAATGTATTTATCGTCACT-------GAAG------GAG------GGA------G-GACTA----TTTTTACCGATACTATACTTAAGCGC------GGTAGTCATTTGAATTTCATGTac
gi|38 : -AAAA-A--TCGAATAT---TTT-GTATGGTTTT-C-TCGTTAT-----AGAAGATAATACTTTGAATGTGGCAGGTACACcattttagtggaagctg
gi|39 : gcagactgagagatcaacgttttctgAATCACAGTC---AACA----GTACAACAAAGGACA-TAGAACAAACTC--AA-AC-C---TC--TCACAA-CGACTATAGAAGG-ACTCGctatt
gi|4 : TAATAAACAAAAAGAAAT----AAACCTAGAAAGAAAGA-A--------C---ATAGTATAAC-ACGG-TTGGCTCACT--T--T--A--CATTTGAGATG-A-C-CCC---ACCATTATGGCATATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAAG-------------CA--GCAAAAA-AAAATC-AA-CAA--AAGGTGTTTAAAA-A--GCTGAAAT---TTT-ATATGTTTTT-CGTCGTTAC-----AGA---TAATACTTTAAATGTGGCAGACATACTA--GAAGTTC-A-A------A-TT------------T----------T----AA--------AGTAAATGTATA-----AAAAAAG-A---------CAA-A--AA-C-AC------ATT--------CGTATA-ATAGCG--TAAATT--TCA-AT--AA-AAAAT--------GACATATTTTCACGAATGGCGAA--A-G-AGAAAAAGC----AT--AGCGTTTACCTTTGTGCAAGTTCAAATCGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAACTATTCCAGC-CTTTCTTTT-ATTAATATTCATGAATAATTCCTAATTGAATGTCAATCTGAAATTTTGTTATTGAGCCCACTATTT-AATTTTTC-CCTAC-ATTTTAT----C----A----A--AAC--AA--------ATGACGGCC-----ATATTAATCGTCGTTTG----GGACACT----TCA------GG-------A-AAATA----TTT------------TACAAATGCGC------AG------TTttatggtttgccttccaa
gi|40 : atttaaattaCCT-----GCGGTTGATGGATAGAAAGCAAG----AA-C-----AACAAAC-------------------TATAAC-ACGAGTTGCCTC-AC--TTAT--A--CTTTTGAGACG-ACC-CCC---A-----------TATaaagggtgggaacctacgtgcatgtgacataggttctccctcttgcagtagtcatttgc
gi|5 : AATGTAGTTACGACCATTAAACACAT----ATAAAACAAA-TACTGTGAAAGACAG----ATG-ATT--TTATTTA--AAAATCAACCAAACAACCT-----TTGGTTGATAGATAAAAAGAAAG----AAAC----GAACAAACA-C--------C---ATAGTATAAC-ACTGATTGCTTT-AT--T--T--ATACTTTTGAGACGTG-T-CCC---A-----------TATAAT-GCATTTCTAA---C--CAAAATCGTACGAA--------------CACCGCAAAAA-AAACGCGAG-CAA--GTGGTGTT-AAAA-AG-TCTAGTAT---TTT-GAATGTATTT-CGTTGTTAT-----AGA---TAATGCTTTAAATATGGCAGACATACTAAAGAAGTTT-T-G------A-TT------------T----------T----AA--------A----------A-----CACATAT-----------ACA-A--AA-T-GC------ATT---------ATATACAT-TCG--TTAACG--TCA-AA--AG-TAAAT--------GACCGATTTTCACAAATAGCGAA--A-G-AG-AAAAGC----ACA-AACATTGACCGTTACG---GTTCAAGTCGATACTTTGAAT-----AAACATAGCACGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCGTTT-ATTTAT----ATGTATAATTCCGAATCGAACGTCAATCTGAAATCGTAGTACTGGGACCACAAATTCAATTTT-C-ACTAC-ATT---T----T----ATAACA--A----CA--------ATGGCGGCCATATTAT---TA--GTCGCTTA----GGCCGCC----GAA------GG-------GAGAGGG----GT---ACCGTTGCTAT
gi|6 : AAAAA-C---TCGAA-CAAAAGTGATGTT-AAAAAA--TCTAATAA---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGCGACAGGCATACAA--GAAGTTC-T-G------A-TTTTACAGCACATGT----------A----TG--------A----------A-----AAAAGACT-----------AA-A--AA-C-TC------ATT--------CGTATA-AAAGCG--TAAACG--TCA-AT---A-AAAAT--------GACTTATTTTTATAAAAGACGAAC-A-C-GG-AAAATA----ATA-AACATTTGTCTTTGCGCGAGTTCACATTGACATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-TCTTTTTAAAGTTTTCCAGC-CTTTC-TTT-ATCAAT----ATAAATAATTCCGAAACGAACGTCAATTTAAAACCGTGGTATTGAAACCACAA-CTCAATTTTTTACCTGCAATT---T----CCAA-A----A--A----AA--------ATGGCTGCCAAAATATATTTATCGTCACTTG----GGACACTGAAAGAA------GG-------G-GACTA----TTTCTACCGTTGCTATATTTATGAGCAGTAGTCG------TTTGAATTTCATGTcataa
gi|7 : -CCATGAAA-----GACACAT--A--AAACACATGATCA------T------TATAATAGTTGCAACAAAAGTATTCCAT-----ATAATGTAACTACGAGCATAAT-T-TAT----AAATAACAAAAT--T-TGAAAGACAG----GTGCAAT--TTATTTT--ATAATAACCCAAACAAaatttttgtgtaaactgtatgatttgactaccacatacttgaagtttttgactctctgttagatagaacaaaaatcgcaatacaaatttggatttctacgtcttctgctattgcaatagagctaaact
gi|7 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaC----AAACAAACG-A--------C---AATGTATAAC-ACGGATTACCAC-TC--T--TCTA--CTTTTGAGACG-A-CTCCC---A-----------TATAAC-TTGTTTCAGA---C--CAA---TGCGTGAAATTGCATATTTCACCACCACAAAAC-A---TCAAA-CAA--ACATTGTT-AAAA-AAATTCAATAA---TTT--TATGTTTTTTCGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GGAGTTCAT-ATAGCACA-TG------------T----------A----TA--------T----------A-----AAACGA--A---------AAA-A--AA-T-AC------ATT--------CGTATT-AAAGCA--CAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-GTAAGCGATAACG-AAacgacaatgtataacacggattaccactcttctacttttgagacgactcccatataacttgtttcagaccaatgcgtgaaattgcatatttcaccaccacaaaacatcaaacaaacattgttaaaaaaattcaataattttatgttttttcgtcattatagataatactttaaatgtggcaggcatactaggagttcatatagcacatgtatataaaacgaaaaaaaatacattcgtattaaagcacaaacgtcaataaaaaatgactgattttcacgaacgacgaaagaggtaagcgataacgaa
gi|8 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaccatgaaagacacataaaacacatgatcattataatagttgcaacaaaagtattccatataatgtaactacgagcataatttataaataacaaaatttgaaagacaggtgcaatttattttataataaccTGGTTGCCAACTAGATAGAAAG----AAAT----AAACAAACATA--------C----TAGTATAAC-ACTGATTGCCTC-TC--TC-C--A--CTT
gi|8 : t--------------CACCGCAAAAGCA---TCGAA-CAA--GTAGTGTT-AAAA-A--ACTAAAAT---TTT-GTATGTTTTT-CGTCATTGT-----AGA---TACTACTTTAAATGTGGCAGGCATACTT--GAAGTTC-T-G------A-TTG-----------T----------ATAGCAC--------A----------AGTGTGGAAAAAGAA---------AAA-A--AATT-AC------CTC--------CGTTTA-AAAGCG--TAAAAG--TCA-AT--AA-TAAAT--------TACTTATTTTCACAAAATACGAATCC-G-TA-AAATAA----ACG-AACATTTGTCTTTGCTCGAGTTCAAATCGATATTTT-AAT-----AAACAAAGCAAAC---A---TGCT----A-CCCTTTTATAGTATTTTAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGATACTCTGAAACCGTGGTATTTAGACCATAATTTCGATTACTG-TCTGC-ATT---TTA--C----A----A--A----AAAAAAT---ATGGCTGCCAAAATATATTTATCGTCACTTT----GAACGCT----GAATGAGTGGG-------G-AACTA----TTTTTACCGTTGCTATATTAATGCGCAGTAGTTG------TTTGATTTTAATGTcaccgcaaaagcatcgaacaagtagtgttaaaaaactaaaattttgtatgtttttcgtcattgtagatactactttaaatgtggcaggcatacttgaagttctgattgtatagcacaagtgtggaaaaagaaaaaaaattacctccgtttaaaagcgtaaaagtcaataataaattacttattttcacaaaatacgaatccgtaaaataaacgaacatttgtctttgctcgagttcaaatcgatattttaataaacaaagcaaacatgctacccttttatagtattttagcctttcttttattaatatgaataattccgaatcgaacgatactctgaaaccgtggtatttagaccataatttcgattactgtctgcattttacaaaaaaaaatatggctgccaaaatatatttatcgtcactttgaacgctgaatgagtggggaactatttttaccgttgctatattaatgcgcagtagttgtttgattttaatgt
gi|9 : ttggttgccaactagatagaaagaaataaacaaacatactagtataacactgattgcctctctccactt---ACAGTATAAC-ATGGGTTGGCTC-CCTTT--T--A--CTTTTGAGATG-
gi|9 : T---TTT-GTATGTTTTT-CGTCGTTAA-----AGA---TAATACTTCAAATGTGGCAAGCATACTA--GAAGTTC-T-A------A-TT------------T----------T----AA--------AGTAAATGTATA-----AAAAAAGAA---------AAA-A--AA-C-AC------ATT--------TGTATA-ATAACG--TAAATG--TCA-AT--AA-AAAAT--------GAC--ATTTTC-------GCGAA--A-G-AG-AAAAGC----AC--AACGGTGACCTTTGCTCGAGTTAAAATTGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTA-ATTAAT----ATAAATACTTCTGAATGGAATGTTAATCTGAAATTGTGGTATTGAGCCCACAATTTCAATTTTAC-CCTGC-ATT---TTAC-C----A----A--AAC--AA--------ATGGCAGCC-----ATATTAATCATCGTTTG----GGATGCT----TCA------GG-------G-AACTA-----TTTTACTTATG-TGCAGTAGTGCGC------ttttgagacttttgtatgtttttcgtcgttaaagataatacttcaaatgtggcaagcatactagaagttctaattttaaagtaaatgtataaaaaaagaaaaaaaacacatttgtataataacgtaaatgtcaataaaaaatgacattttcgcgaaagagaaaagcacaacggtgacctttgctcgagttaaaattgatattttgaataaataaagcaagtatactacctttttaaagtattccagcctttctttaattaatataaatacttctgaatggaatgttaatctgaaattgtggtattgagcccacaatttcaattttaccctgcattttaccaaaacaaatggcagccatattaatcatcgtttgggatgcttcagggaactattttacttatgtgcagtagtgcgcgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): TCGGCCTCGTTATTGATTTAAAACTGTTTACAACTAAAATTCTGTAACACTTTCAGATATTTTGGATCGTTTTTGTTTTTATTTAGGTCTATTTTTTCATCATCTTAAAAATCAATTGTATGCATTGTCAAAATGAAGAACAAATGATTTTTTTTTCAATTACAGTTAATGAAAATTGTTAATTTCACTTACTGATTCAATGTTAACACCATAAACCAGTCATAATTGTCGGTTACAGATTGTTTTTAGTGAATGATTATAAAAAACACACAAAAAAAACCACAAAAAAACCCCA
Unaligned ( gi|27 ): ATTTCATGCCTTCTTGGAATATTAATATAGATTTCTCAGTCAATCGTTTTCCACTGTACTATTATTTAAAATAGTAAAATTATAAATGTTAATTTCACAAAGTTCACAGAAAATAATTATGTTCTCAAATATATTAATATCCATATTATCATATACTCCTGAATAAACCCACTTGGGGGTTGGGGTGGAGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGG
Unaligned ( gi|29 ): TTACCAATGAGCTCATGAATACAGATCGAAAGACAGATAGAAAGAAATTTTGTTATAATGATTTTTTTTAAATGATGATCTATGGATATTCTAATTTTAAGTTGGTGATGACATAATTGTATACATTTTTCTTTTTTATTGTATGTCTGTTTGATATCATAAACCAACGCATAGAAGACCCATCCAACACATTGTA
Unaligned ( gi|33 ): TGATGTATATTAACTAAAATTAGAGTATATTTATAAATGTATTTTTATAGATATTTAAAAGTTATTTCACATTTTAAATTATTTGTTAATGAAAAAAAGATGTCCTTGACTATTGCACGATGCTCAGGTTATGGTG
Unaligned ( gi|36 ): ATGGTTATCTCTCTCATCATATACAGTAAGATACATGTGCTGTATCCCAGAATAAACGCCCCTGCTGGTAATGCAGGGGGTGTGTGTGTGTGTGGGGGGGGGGGCGGG
Unaligned ( gi|41 ): AAATGTATCTTTAAATTTACCAATATAAATAACATACATTTATAAACTAAAAGGCCCTAAAACGTACAACAAAA
Unaligned ( gi|42 ): ATATATAGCTGCGCGCGTGACGTAGGTTCTCCCCCTTGAGTATACTGCACTTCG
Unaligned ( gi|43 ): GAATTTACCAATGAGCTATTGAATACAGATCTCAAGACACATAAAA
Alignments
lowQualScore : 444444444444444 111111 11111 11 11111 11111111 22222 222222222222222 111111 6666666666666666666666666 111 77777777777777777777777777777777777777777777777777777777 11111111111 11111111 1111 444444444444444444444444444444444444 222222222222222 55555555555555 4444 11 4444444
lowQualScore : 6 5 333333333333333 444444 0 11 1 00000 1 1 3 7777 3 7777 5 11 55 00000 7777 99999 3 11111111 555 2 2 77 66666 33 777 3 555555555555555 5 3 444444 2222222222222222222222222 4 888 1 4 55 9 3 2 99 444 2 2 66666 999 66 2 2 44444444444444444444444444444444444444444444444444444444 555 1 44444444444 666 777777 99999999 2 2 33 33 2 333 2 00000000 55 3 88 5 2 2 1 0 0000 88 0 1 66666 444 777 5555 2 2 1 2 6666 1 2 0 0 0 3 2 0 3 1 3 777777777777777777777777777777777777 2 6666 6666 000000000000000 3 99999 2 0 00000000000000 1 2222 1 5 1 11 2222222 888 5 3
lowQualScore : . . ............... ...... . .. . ..... . . . .... . .... . .. .. ..... .... ..... . ........ ... . . .. ..... .. ... . ............... . . ...... ......................... . ... . . .. . . . .. ... . . ..... ... .. . . ........................................................ ... . ........... ... ...... ........ . . .. .. . ... . ........ .. . .. . . . . . .... .. . . ..... ... ... .... . . . . .... . . . . . . . . . . . .................................... . .... .... ............... . ..... . . .............. . .... . . . .. ....... ... . .
lowQualScore : 7 7 444444444444444 444444 4 99 0 00000 0 5 6 7777 6 7777 1 00 55 00000 1111 77777 1 22222222 000 5 9 99 44444 99 111 3 000000000000000 0 4 555555 9999999999999999999999999 0 000 4 0 55 2 1 9 66 777 7 7 77777 333 88 9 9 44444444444444444444444444444444444444444444444444444444 000 0 11111111111 333 777777 11111111 5 1 22 11 2 777 2 33333333 88 0 44 0 5 5 2 3 6666 33 3 5 77777 777 333 7777 7 9 6 9 1111 6 3 8 7 2 7 8 2 1 2 1 111111111111111111111111111111111111 4 5555 5555 555555555555555 3 55555 4 4 00000000000000 0 0000 0 7 0 99 7777777 111 7 7
consensus : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-A-AAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT----------TA----AA--------A----------A----------A-------AA---ANAGAA---------AAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACA----GNATAACAAAGATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
Reference ( family-2882 ) : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-A-AAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT----------TA----AA--------A----------A----------A-------AA---ANAGNA---------AAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAA--TGNATAACAAAGATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
gi|1 : TAGTTGCAACAAAGGTTTTCCAT-----ATAATGTAGCTACGAGCAAAACAT-TAT----ATGAAACAAAATATT-TGAAAGACAG----ATGCAATGATTTTTTT--TTA-TGAACTAAATAACCT-----GTGGTTGATAGATAGTAAGAAAG----AAAC----AAACAAACA-AGTTGGGAAC---ATAAT-TAACCACAAGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCCCAA-----------TATAATCGCGT----GAACTT--CAAC-TTTC---AC--------------CAACGCAAAAA-T---TCGAA-TAA--GTGGTGTTTA-AAA-A--TCTAACAT---TTT-GTGTATTTCT---TCATTAT-----AGA---TTATACTTTTAATGTAGCAGGTATACTA--AAAGTTCT-GA-TTTTATAGCATGTA----AG--------A----------A----------A-------AA---ACAGTATAAAAAAAGAAAAAA---AC------ATT--------C---------GCG--TAAACG--TCA-AT--AA-AATAT--------GACTGATTTTCACGAAAGACGAA--G-G------AAGCGACAACA-AAGATGAGTCTTTGCGAGAGTTCAAGTCAATATTTTAAAT-----AATCAAAGAAAGT---A---TACT----A-CCTTTTCAAAGTATTGTAG--------GTT-ATTAA------------------AATCAGACGTCAATCTGAAATCGT---------------ACTT---TTTTT----TAA-A---------------A----A--A----AA--------ATGGCGGTCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA-------G-------G-GACTA----TTTTTATCGTTGCAATTCTAATG
gi|10 : tgtaacattttcagatagtttcgattcattattgttttatttaggtctatattccaatcattttaaaaatcaattgtatacattttcaaaatgaagaacaaatgattttttttcattacagttaatgaaaattattaattgcacttactaattcaatgttaacaccatgaaccatgaatatttgttggctacataattgttttattgactgttatagaaaaaacagatctaaagacatttataatttttagttggtgatgacataactgtatacagttttgattctttttttattgtatgccattttggtatcataaaccagcacattcgtgaatacacttgatcaTT-A-AAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAAGCCTACTA--GAAGTTCTCAA-TT----------TA----TAGCATATGTA----------T----------A-------AT---AAAGGA---------AAAAA--T-AC------ATT--------CGTACG-ATAGCG--TAAATG--TCA-AT--AA-AAA-T--------GACTAATTT-CACGAAC--------------------------CG-CACATTGCCCTTTGCGTGAGTCCAAATTGATATTTTAAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTACTCCAGG-CTTTCTTGT-ATTAAT----ATAAATAATTCCAAATTGATCATCAATCCAAAATCATAGTATTGAGACCACAAATTCAATTTTCT-CCTGC-ATT---T----TACAAA----A--A----AA--------ATGGTAGCCAAAATATATTTATTTTTGCTTC----GGACACT----GAA-------G-------G-GATTA----TTT------TTGCTATACTAATGCAC------T-------TTTAA
gi|11 : TCAATTGCATGACAA------TAGTTGCTATGTTAGTTGCAACAGATGTCTTCCAT-----ATAATGTAGTTACGACCATTAAAT-AAT----ATAAAACTAAATATT-TGAAAGACAG----ATGAAAT--TCCTTTT--ATAATAAACCAAA------------TGAT--ATAGATAGAAAGAAAA----AATT----GAACAAACA-A--------CATGATAGTATAAC-ATGGGTTGCCTC-ACTTT--T--A--CTCTTAAGACATC-C-CCC---A-----------TATctgtagtcatccacaattcatgtcattt
gi|12 : accaatgagctcatggatacagatcgaaagacaaatagaaaatcattttggtataataatgaaactattttttaattcaaatagatgatgatctatggataatttttagtttgtgatgacataattgtatacagttttgtttctttgtttttttattgtatgcctttatgatataaaaaaaaccaacacattgataacccg-CACAT-TTATGACC-----A--------ATCAAACCCACGATCA------TTGATGCTATTTTAGTTGCAACAGAAGTCCTCCAT-----ATATAGTAGTAACGACCACAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--CTATTTT--ATAATAAACAGAACAACTT-----GTGGTTAATAGAT----AGAAAG----AAAC----GAACAAACA-A--------C---GTAGTATAAC-AAGGGTTGCTTC-AC--TTGT--A--CGTTTGAGACG-A-C-CCC---
gi|13 : actaatgaactcataatacagatcgaaaggtagatacaaaaaatggttacaataatgaaattattttttaattcaaatagatgatgatctatgaatactttttagttggtgatgacataattgtatacagttttttttttttttttttttttttcattttttattttattaaccaa----------TA----AA--------A----------A----------A-------AA---AGAAGA---------AAAAAA-T-ACTTTATAATTATATAAAACGTAAA-ATTACG--TAAACG--TGA-AT--CG-AAAAT--------GACTGATTTCCACAAACGACGAA--ACG-GG-TGAACC----ACA-ATCAGTGGCCTTTGCGCGGTTTCAAA-CGATATTTTGAAT-----GAACAAAGCAAGT---G---TATT----A-CTTAATTAAAG-ATTCCAGC-A-TTCTTTT-ATTGAT----TTTAATATTGCCGAATGAAACGTCAATCTGAAATCGTGGTATTGAACCCATAATTTCATGTTTCC-CCTGC-GTT---TTAACC----A----A--A----AA--------ATGGCGACCAAAATAGATTTATCAAAGCTTG----AGACGCT----GAA------AGC------G-GACTA----CTTTCACCGTTTCTATcacat
gi|14 : tttatagcacatttaTTATAT-CATAAACCA---ACACATTGACA-ATCCATCAAATACATGATCACAGACTTAGTTGTTATGTTAGTTGCAACAAA-GTCTTCCAC-----ATAATGTAGCTATGAGTATAAAAT-CAT----ATCAAACAAAATATT-TGAAAGACAGAGCTATGCAAT--TTATTTT--ATAATAAACCAAACAAC--------------ATA---AAAAACAAAG----AAAC----GAATAAACA-A--------C---ATAGTATAAT-ACAGgtagggttgcgtactaaaatgatcgtgtgggtcctggctg
gi|15 : gagctcatgaataaatacagatccaaagactggaagatattttgttacaataatgaaaatatttttataattcaaatagatctaaatgatgatctatggatattttccagttttagctggttatgtcataattgtatacagttgtttctttttttattgtatgcctttt-CACAT-TCATGAAT-----GG-A-CT--ATCAAACACATGATCA------TAGTGGTTATGTTAGTTGCAACAAAAGTCTTCAAT-----ATAAT-----TA---ACATAGAAA-CAT----ATAAAACAAAATATT-TGAAAAACAG----GTGCAAT--TTATTTT--ATAATAAACCGTACATCCT-----GTGTCTGATAGATAGAAAGAAAGAATCAAAC----AAACAATCA-A--------C---ATAGTAAAAC-ATTGGTTGCCTC-CC--TTCT--A--CATTTGAGATG-A-C-CCC---
gi|16 : tctacaggaagattgaaagaaattttgttataataatgaaaatacttttttaattctaaatgtaaatattttagttggtgatgacataactgtatttagttttgattatttttttaaatgcacgcctttttgatatcataaaccaaGTCTTCAATGACAAATAATGTAGCTACGCGCATGAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTTTTAA--ATAATAATTCAAACATCCT-----GTGGTTGATAGATAGAAAAAATG----AAA------AAAAAACA-A--------C---ATAATATAAC-ATGGGTTG
gi|17 : taggtctatttttttttatcatcttcaattgtatgcatatttaaactgaagaatagaagatttttttttcaattacagttaacgaaaattattaattgcacttactgattcaatgttaatatcataaaccatccatatttgttggttacagttttgatgctttttcttgttgtatgcctttttgatatcataaaccaacacattcat-CACAT-TCATGAAT-----GGCC--T--ATCAGACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGAACATAAAAT-CCTACTCATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--TTATTTTAAATAATAAACCAAACAACCTGGAGAGTGGTTGATAGACAGAAAGAAAC----AAAC----AAA
gi|18 : tctaaagacaggtaaaagaaattttattataataatggaaaaatattcttttaattcaattataaatggatattttctaattttttagttggtgatgacataactgtatacagtttttattctttttttttattgtatgccttttcaatatcataaaccaaA----AA--------A----------A----------A-------AA---CCAGAC---------AACATA-T-AC------AT------------ATA-AAAGCA--TTAACA--TTA-AT--CG-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-A-----------------------TTT-CA-GAG---AAATCGATATTTCGAAT-----AAACAAAGCAAGTTCAA---CACT----G-CA-----AGAGTATTTTAAT-CTTTTTTTTTATTAAT----ATGAGTA-TTTCTAATCGAATATCAAACTGAAATTGCGGTACTGAGATCACAA----AA----TC-CAAAC-------C----C----A----AGGA----AA--------AT-GCGACTACAATATATatag
gi|19 : tatagatgcaattatataaatacacacttagcacacgctaagatcagactttatagcacatataatataaaaaacacacacCG--TAAATG--TAA-A---AA-AAAAT--------GACTTATTTTCATGAATGATGAAC-A-C-AG-AAAAA-----ACA-AACATTGGCCTTTGTGCTTATTCAAGTAAGTATTTTGAAT-----ATACAAAGCAAGT---A---CACT----A-CCTTTTTAAAGTATGCTAAC-C-ATCTTTA-ATTAAT----ATAAATAATTCCGAATTGAATGTCAATCTGAAACCATGGTTTTGAGATCATAATTTCAATTTTCC-CCTGC-ATT---T----C----AC---A--A----AAAAAGAAATATGGCTGCCAAAATATATTTATCGTCACTTG----AGATGCT----AAA------AGATGGGCTG-GAATA----TTTTTACAGTTG-----CTGATGTGCAGTAGTTG------TTTGAATTTcatttcagcacgg
gi|2 : TTATATTCATAC-CCATAAAC-----AGCA-AT--ATTACACACATGATCA------TAGTTTTTATGATAGTTGCAACAAAAGTATTCCAT-----ATAATATAGCTACGACTATAACAT-CAT----ATAAAATAAAATATT-TGAAAGACAG----ATGAAATATTTATTTT--ATAATAAAA-AAACAACCT-----GTGGTTGATAGATAGAACAAAAG----AAAC----GAACAAACA-A--------C---ATATTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAAACT-A-C-CAC---A-----------TATAAT-GTGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGAAAAAA-A---TCGAA-CAA--ATGGTGTT-A-ACT-A--TCTAATAT---TTTGGCATGTATTT-CGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGACATACCA--GAAGTTCT-GA-TT----------TA----AA--------A----------A----------A-------AA---AGAGCA---------AACAAA-TGAC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AG-AAAAT--------GACAGATTTTCACGAATGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGTCTTTGCACGCGTTCAAATCGATATTTTAAAT-----AAACAAAGCAAGA---AGAGTACT----C-CATTTTTAAAATATTCCAGCATTTTGTTTT-ATTCAT----ATAAATAATTCCGAATCGAAAGTCAATCTTAAATCGTGGTATTGAGACCACAATTTAAATTTTTC-CCT---------------------------A----GA--------ATGGCGGCC-----ATATTAATCGTCACTTG----GGACGCT----AAA------GG-------G-GACTA-----TTTTATCGTTGCTATACTAATGCGC------TG------TCTGCATTGCATGT
gi|2 : acttgtattataaAA--TGAATAACAAAGATTA-TAGAATAAAATTGTAATAT-TA-GCC--GCACGATTCCTTATAGAAGGCATTCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgaaatgaataacaaagattatagaataaaattgtaatattagccgcacgattccttatagaaggcattcg
gi|20 : acttgtattataattatattcatacccataaacagcaatattacacacatgatcatagtttttatgatagttgcaacaaaagtattccatataatatagctacgactataacatcatataaaataaaatatttgaaagacagatgaaatatttattttataataaaaaaacaacctgtggttgatagatagaacaaaagaaacgaacaaacaacatattataacacgggttgcctcccttacttttgaaactaccacatataatgtgtttctgaccaaatcgcgtgaacaccgaaaaaaatcgaacaaatggtgttaactatctaatattttggcatgtatttcgtcattatagataatactttaaatgtggcagacataccagaagttctgatttaaaaaaaaagagcaaacaaatgacattcgtataatagcgtaaacgtcaatagaaaatgacagattttcacgaatgacgaaagagaaaagcacgaacattggtctttgcacgcgttcaaatcgatattttaaataaacaaagcaagaagagtactccatttttaaaatattccagcattttgttttattcatataaataattccgaatcgaaagtcaatcttaaatcgtggtattgagaccacaatttaaatttttccctagaatggcggccatattaatcgtcacttgggacgctaaaggggactattttatcgttgctatactaatgcgctgtctgcattgcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgaGTCAAAATATATTTATAGTTGCTCATAATGAACGCT----AA----------------G-GACTACTACTTTTTAGCATTGCTAAACTAATGTGC------AG------T
gi|20 : ATGAAATTACCGTCAACA----GAATAACAAAGATTA-GAGAACAAAATCGTACT-T-TGGGAC--TCATGA-TCACAATAGAAGGCATTCGagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaatgaaattaccgtcaacagaataacaaagattagagaacaaaatcgtactttgggactcatgatcacaatagaaggcattcgctgtgttccgcttccaaaa
gi|21 : gtcaaaatatatttatagttgctcataatgaacgctaaggactactactttttagcattgctaaactaatgtgcagtagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaa-A-AAA-A--TCTAATATATATTT-TTTTTTTTTT------TTAT-----AGA---TAGTACTTTAAATGTGGCAGGCATACCAG-GAAGTTTT-GATTT----------TA----TA--------G----------C----------A-------CATGTATAAAA---------CAACAA-C-AC------AT-----------TATT-ATAGCG--TAAACG--TCA-AT--AATGAAAT--------GACTGATTTTCACAAACGctgtgttccgcttccaaaa
gi|23 : ttgatgtatattaactaaaatgcaataagattattatctaaaaatgtgtatttattgatatttaaaagttattttgcattttaaaatatttgttactgaa-T-AC------ATT--------TATATT-A-AGCGATTTACCGAATCG-AT--TA-AAAATATCATCTGGACTGATTTTCATGAACGACGAA--A-G-AG-GTAAGC----TCA-AACATTGTCCTTTGCGCGAGTAAAAATCGATATATTGAA------AAAAAAAGCAAGT---A---TACT----A-CA-TTTTAAAGTAGTTAAAT-TATTCTTTG-GTTAAT----ATGAATAtttnnnnnnnnnnatacaacatcagtgatcttgctcctgaaatacacaattaacatgagtaa
gi|24 : gatgttttgtattgtgacatgtgatgttgccgtcaatgtaatcatgtagaaggtcattatgcatatgaatattaaaattacagctTGTTAT---AGTTGCAACAAAAG---------------------GCTACGAACAT------CAT----ATAAAACAAAACATT-TGAAAGTGAG----ATGTAc
gi|24 : aaacacaAACA--TCATAT--AA-AACAA--------AAC--ATTT----GAAAG-TGAG--ATGTAG-GAAAGC----ACA-AACATTGGCCTTTGCGCGAGTTCAAAACAATAGTTTGA-T-----CAACATAGAAAGT---A---TACTTACTA-CCTTTTTAAAGTAATCCAGC-TTTTCTTTT-ATTAAT----ATAAA----TCC---------------CT-AAATCGTTGTATTGGGACCACAATTTTAATTTTTC-CCTAC-ATT---T----T----AT---A--AAAACAA--------ATGGCGGCAAAggaaagcacaaacattggcctttgcgcgagttcaaaacaatagtttgatcaacatagaaagtatacttactacctttttaaagtaatccagcttttcttttattaatataaatccctaaatcgttgtattgggaccacaattttaatttttccctacattttataaaaacaaatggcggcaaaca
gi|25 : aaacacatgttatagttgcaacaaaaggctacgAAATCGTGGTCAACAAAATAAAAAAAAAAGATT----GAACAAATT--TAATATACAGGCA--ACATGA-TCCCTATAGAAGGC-TTCGca
gi|26 : tcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAATCGCCGCCCACA----GTATAACAAA-ATTAATAGAACAAAACCATAA-----ATGCCCATCATGA-TCACTATAAA
gi|28 : gtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnA-A--------C---ATAGTATAAC-ACAGTTTGCCTC-CC--T--CC-A--CTTTC-AGATG-A-C-CCCC--A-----------TATAAT-GTGTTTCTGA---CTACAAA--------AA--------------CACTGCAAAAA-AA--TCAAAACAA--GTGGTGTTGA-AAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTATTATATAAA---TAAAACTTTAAATGTGGCAGGCATTCTA--GAAGTTCT-GA-TT----------T
gi|3 : TAGTATAAC-ACGTGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCTCAA-----------TGTAAT-GTGTTTCTGA---CTTCAA---CAC-------------------CACCGCAAAAA-A-----AAA-CGA--GTTGTGTT-AAAAA-A--TCTAATAT---TTT-GAAT-TTTTT-TGTCATTGT-----AGA---AAATATTTGAAATATGGCGGG-ATGCTA--GAAGTTCT-GA-TT----------TT----AT--------A----------G----------C-------AC---AT-GTA---------TAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-ATAAAA-AAAAT--------GACTGATCTTTA-GAATGACGAA--A-A-GG-AAA--C----AAGAAACATTAACCTTTGCGTGtacagcacatgtataaaaag
gi|3 : GATCTTTAGAATGACGAAAAGGAAACAAGA---AA--CATT----AACCTTTGC---GTGTTTCACC-CTTTCTTTA-ATTAAT----ATAAATAATTCCGAATTGAACGTCAATCTGAAATCGTTGTATTGAGACCACAGTTTCAATTTGTC-CCTAC-ATT---T----TACCAA----A--A----AA--------ATTGTGGCCCAAATATATTGATCGTCGCCTG----GGCCGCT----GAA------Gtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|3 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactGAAATCGCCGCCAACA----GTATAACACAGATTA-TAGAACAAGGTCATAAAA---GTGCC--TCACGA-TCGCTGTAGAAGGTATttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|30 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaTAGTATAAC-ATGTGTTGCCTC-CC--T--TCCA--CTTTTGAGATG-ACC-CCC---A-----------T-TAAA-ATGTTTC-GA---C--------------AC--------------CACCACAACAA-A---TCAAA-CAA--GTGGTGTT-A-AAAGA--TCTAATAT---TTT-GTATGTTTTT-CGTCATTAT-----AGA---TAATACTTTAAAATTGGCAGGTATACTA--GAAGTTCT-GA-TT----------cgctacgataacactacgctagcctttcaataaa
gi|31 : -CACAT-TCATAAAT-----G--------ATCAAACACATGACCA------TAGTTgtatagcacatgtataaaaaac
gi|32 : agttctaaagacagataaaagaaatttagttatgataatgaaaatatctctttgattcaattatatagatattttctaattttgagttgatgacgacataactgttttgatttatttttttattgtatgcctttttaataaaataaaccaaAA-A--TCTAATAT---TTT-GTATGTTTT--CGTCGTTAT-----AGAAGGTAATACGTTAAATGTTGAAGGTATATAA--CAAGTTCT-GA-TTG---------TATGGCAC--------A----------AGTATG-----A-------AA---ATAAAA---------GAAAAC-A-AC------ATA--------TGTATA-ATAGCT--TAAACG--ATA-AT--CA-AAAGT--------GAC-AATTT
gi|34 : T--------CGTATA-ATTGCG--TAAACG--TCA-AT--TA-ATAATT-------GACATATTTTCATGAATTACGAA--A-G-AG-AAATGC----ACA-GA-GTTGACCTTTGTGTGAGTTCATCTCATTATTTTGAAG-----AAACAAAGCAAGT---A---TACT----A-CCTTTTc
gi|35 : ATGAAATCACTGTCAGCA----GTATTACACAGGTTA-TATAACAAATT-GTACT-T-TGTGTC--CCACCA-TCACTATAGAAGGTATTC
gi|37 : ttgaaacgtttggaactattttatcaggcggtggaaCAAAATGTATTTATCGTCACT-------GAAG------GAG------GGA------G-GACTA----TTTTTACCGATACTATACTTAAGCGC------GGTAGTCATTTGAATTTCATGTac
gi|38 : -A-AAA-A--TCGAATAT---TTT-GTATGGTTTT-C-TCGTTAT-----AGAAGATAATACTTTGAATGTGGCAGGTACACcattttagtggaagctg
gi|39 : gcagactgagagatcaacgttttctgAATCACAGTCAACA----GTACAACAAAGGACA-TAGAACAAACTC--AA-AC-C---TC--TCACAA-CGACTATAGAAGG-ACTCGctatt
gi|4 : TAATAAACAAAAAGAAAT----AAACCTAGAAAGAAAGA-A--------C---ATAGTATAAC-ACGG-TTGGCTCACT--T--T--A--CATTTGAGATG-A-C-CCC---ACCATTATGGCATATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAAG-------------CA--GCAAAAA-AAAATC-AA-CAA--AAGGTGTTTA-AAA-A--GCTGAAAT---TTT-ATATGTTTTT-CGTCGTTAC-----AGA---TAATACTTTAAATGTGGCAGACATACTA--GAAGTTCA-AA-TT----------TT----AA--------AGTAAATGTATA----------A-------AA---AAAG-A---------CAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAATT--TCA-AT--AA-AAAAT--------GACATATTTTCACGAATGGCGAA--A-G-AGAAAAAGC----AT--AGCGTTTACCTTTGTGCAAGTTCAAATCGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAACTATTCCAGC-CTTTCTTTT-ATTAATATTCATGAATAATTCCTAATTGAATGTCAATCTGAAATTTTGTTATTGAGCCCACTATTT-AATTTTTC-CCTAC-ATTTTAT----C----A----A--AAC--AA--------ATGACGGCC-----ATATTAATCGTCGTTTG----GGACACT----TCA------GG-------A-AAATA----TTT------------TACAAATGCGC------AG------TTttatggtttgccttccaa
gi|40 : atttaaattaCCT-----GCGGTTGATGGATAGAAAGCAAG----AA-C-----AACAAAC-------------------TATAAC-ACGAGTTGCCTC-AC--TTAT--A--CTTTTGAGACG-ACC-CCC---A-----------TATaaagggtgggaacctacgtgcatgtgacataggttctccctcttgcagtagtcatttgc
gi|5 : AATGTAGTTACGACCATTAAACACAT----ATAAAACAAA-TACTGTGAAAGACAG----ATG-ATT--TTATTTA--AAAATCAACCAAACAACCT-----TTGGTTGATAGATAAAAAGAAAG----AAAC----GAACAAACA-C--------C---ATAGTATAAC-ACTGATTGCTTT-AT--T--T--ATACTTTTGAGACGTG-T-CCC---A-----------TATAAT-GCATTTCTAA---C--CAAAATCGTACGAA--------------CACCGCAAAAA-AAACGCGAG-CAA--GTGGTGTT-A-AAA-AG-TCTAGTAT---TTT-GAATGTATTT-CGTTGTTAT-----AGA---TAATGCTTTAAATATGGCAGACATACTAAAGAAGTTTT-GA-TT----------TT----AA--------A----------A----------C-------AC---ATAT-----------ACAAAA-T-GC------ATT---------ATATACAT-TCG--TTAACG--TCA-AA--AG-TAAAT--------GACCGATTTTCACAAATAGCGAA--A-G-AG-AAAAGC----ACA-AACATTGACCGTTACG---GTTCAAGTCGATACTTTGAAT-----AAACATAGCACGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCGTTT-ATTTAT----ATGTATAATTCCGAATCGAACGTCAATCTGAAATCGTAGTACTGGGACCACAAATTCAATTTT-C-ACTAC-ATT---T----T----ATAACA--A----CA--------ATGGCGGCCATATTAT---TA--GTCGCTTA----GGCCGCC----GAA------GG-------GAGAGGG----GT---ACCGTTGCTAT
gi|6 : AAAAA-C---TCGAA-CAAAAGTGATGTT-A-AAA-AA-TCTAATAA---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGCGACAGGCATACAA--GAAGTTCT-GA-TT----------TT----AC--------A----------GCACATGTATGA-------AA---AAAGAC---------TAAAAA-C-TC------ATT--------CGTATA-AAAGCG--TAAACG--TCA-AT---A-AAAAT--------GACTTATTTTTATAAAAGACGAAC-A-C-GG-AAAATA----ATA-AACATTTGTCTTTGCGCGAGTTCACATTGACATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-TCTTTTTAAAGTTTTCCAGC-CTTTC-TTT-ATCAAT----ATAAATAATTCCGAAACGAACGTCAATTTAAAACCGTGGTATTGAAACCACAA-CTCAATTTTTTACCTGCAATT---T----CCAA-A----A--A----AA--------ATGGCTGCCAAAATATATTTATCGTCACTTG----GGACACTGAAAGAA------GG-------G-GACTA----TTTCTACCGTTGCTATATTTATGAGCAGTAGTCG------TTTGAATTTCATGTcataa
gi|7 : -CCATGAAA-----GACACAT--A--AAACACATGATCA------T------TATAATAGTTGCAACAAAAGTATTCCAT-----ATAATGTAACTACGAGCATAAT-T-TAT----AAATAACAAAAT--T-TGAAAGACAG----GTGCAAT--TTATTTT--ATAATAACCCAAACAAaatttttgtgtaaactgtatgatttgactaccacatacttgaagtttttgactctctgttagatagaacaaaaatcgcaatacaaatttggatttctacgtcttctgctattgcaatagagctaaact
gi|7 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaC----AAACAAACG-A--------C---AATGTATAAC-ACGGATTACCAC-TC--T--TCTA--CTTTTGAGACG-A-CTCCC---A-----------TATAAC-TTGTTTCAGA---C--CAA---TGCGTGAAATTGCATATTTCACCACCACAAAAC-A---TCAAA-CAA--ACATTGTT-A-AAA-AAATTCAATAA---TTT--TATGTTTTTTCGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GGAGTTC---A-TA----------TA----GC--------A----------C----------ATGTATATAA---AACGAA---------AAAAAA-T-AC------ATT--------CGTATT-AAAGCA--CAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-GTAAGCGATAACG-AAacgacaatgtataacacggattaccactcttctacttttgagacgactcccatataacttgtttcagaccaatgcgtgaaattgcatatttcaccaccacaaaacatcaaacaaacattgttaaaaaaattcaataattttatgttttttcgtcattatagataatactttaaatgtggcaggcatactaggagttcatatagcacatgtatataaaacgaaaaaaaatacattcgtattaaagcacaaacgtcaataaaaaatgactgattttcacgaacgacgaaagaggtaagcgataacgaa
gi|8 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaccatgaaagacacataaaacacatgatcattataatagttgcaacaaaagtattccatataatgtaactacgagcataatttataaataacaaaatttgaaagacaggtgcaatttattttataataaccTGGTTGCCAACTAGATAGAAAG----AAAT----AAACAAACATA--------C----TAGTATAAC-ACTGATTGCCTC-TC--TC-C--A--CTT
gi|8 : t--------------CACCGCAAAAGCA---TCGAA-CAA--GTAGTGTT-A-AAA-A--ACTAAAAT---TTT-GTATGTTTTT-CGTCATTGT-----AGA---TACTACTTTAAATGTGGCAGGCATACTT--GAAGTTCT-GA-TTG---------TATAGCAC--------A----------AGTGTG-----G-------AA---AAAGAA---------AAAAAATT-AC------CTC--------CGTTTA-AAAGCG--TAAAAG--TCA-AT--AA-TAAAT--------TACTTATTTTCACAAAATACGAATCC-G-TA-AAATAA----ACG-AACATTTGTCTTTGCTCGAGTTCAAATCGATATTTT-AAT-----AAACAAAGCAAAC---A---TGCT----A-CCCTTTTATAGTATTTTAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGATACTCTGAAACCGTGGTATTTAGACCATAATTTCGATTACTG-TCTGC-ATT---TTA--C----A----A--A----AAAAAAT---ATGGCTGCCAAAATATATTTATCGTCACTTT----GAACGCT----GAATGAGTGGG-------G-AACTA----TTTTTACCGTTGCTATATTAATGCGCAGTAGTTG------TTTGATTTTAATGTcaccgcaaaagcatcgaacaagtagtgttaaaaaactaaaattttgtatgtttttcgtcattgtagatactactttaaatgtggcaggcatacttgaagttctgattgtatagcacaagtgtggaaaaagaaaaaaaattacctccgtttaaaagcgtaaaagtcaataataaattacttattttcacaaaatacgaatccgtaaaataaacgaacatttgtctttgctcgagttcaaatcgatattttaataaacaaagcaaacatgctacccttttatagtattttagcctttcttttattaatatgaataattccgaatcgaacgatactctgaaaccgtggtatttagaccataatttcgattactgtctgcattttacaaaaaaaaatatggctgccaaaatatatttatcgtcactttgaacgctgaatgagtggggaactatttttaccgttgctatattaatgcgcagtagttgtttgattttaatgt
gi|9 : ttggttgccaactagatagaaagaaataaacaaacatactagtataacactgattgcctctctccactt---ACAGTATAAC-ATGGGTTGGCTC-CCTTT--T--A--CTTTTGAGATG-
gi|9 : T---TTT-GTATGTTTTT-CGTCGTTAA-----AGA---TAATACTTCAAATGTGGCAAGCATACTA--GAAGTTCT-AA-TT----------TT----AA--------AGTAAATGTATA----------A-------AA---AAAGAA---------AAAAAA-C-AC------ATT--------TGTATA-ATAACG--TAAATG--TCA-AT--AA-AAAAT--------GAC--ATTTTC-------GCGAA--A-G-AG-AAAAGC----AC--AACGGTGACCTTTGCTCGAGTTAAAATTGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTA-ATTAAT----ATAAATACTTCTGAATGGAATGTTAATCTGAAATTGTGGTATTGAGCCCACAATTTCAATTTTAC-CCTGC-ATT---TTAC-C----A----A--AAC--AA--------ATGGCAGCC-----ATATTAATCATCGTTTG----GGATGCT----TCA------GG-------G-AACTA-----TTTTACTTATG-TGCAGTAGTGCGC------ttttgagacttttgtatgtttttcgtcgttaaagataatacttcaaatgtggcaagcatactagaagttctaattttaaagtaaatgtataaaaaaagaaaaaaaacacatttgtataataacgtaaatgtcaataaaaaatgacattttcgcgaaagagaaaagcacaacggtgacctttgctcgagttaaaattgatattttgaataaataaagcaagtatactacctttttaaagtattccagcctttctttaattaatataaatacttctgaatggaatgttaatctgaaattgtggtattgagcccacaatttcaattttaccctgcattttaccaaaacaaatggcagccatattaatcatcgtttgggatgcttcagggaactattttacttatgtgcagtagtgcgcgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): TCGGCCTCGTTATTGATTTAAAACTGTTTACAACTAAAATTCTGTAACACTTTCAGATATTTTGGATCGTTTTTGTTTTTATTTAGGTCTATTTTTTCATCATCTTAAAAATCAATTGTATGCATTGTCAAAATGAAGAACAAATGATTTTTTTTTCAATTACAGTTAATGAAAATTGTTAATTTCACTTACTGATTCAATGTTAACACCATAAACCAGTCATAATTGTCGGTTACAGATTGTTTTTAGTGAATGATTATAAAAAACACACAAAAAAAACCACAAAAAAACCCCA
Unaligned ( gi|27 ): ATTTCATGCCTTCTTGGAATATTAATATAGATTTCTCAGTCAATCGTTTTCCACTGTACTATTATTTAAAATAGTAAAATTATAAATGTTAATTTCACAAAGTTCACAGAAAATAATTATGTTCTCAAATATATTAATATCCATATTATCATATACTCCTGAATAAACCCACTTGGGGGTTGGGGTGGAGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGG
Unaligned ( gi|29 ): TTACCAATGAGCTCATGAATACAGATCGAAAGACAGATAGAAAGAAATTTTGTTATAATGATTTTTTTTAAATGATGATCTATGGATATTCTAATTTTAAGTTGGTGATGACATAATTGTATACATTTTTCTTTTTTATTGTATGTCTGTTTGATATCATAAACCAACGCATAGAAGACCCATCCAACACATTGTA
Unaligned ( gi|33 ): TGATGTATATTAACTAAAATTAGAGTATATTTATAAATGTATTTTTATAGATATTTAAAAGTTATTTCACATTTTAAATTATTTGTTAATGAAAAAAAGATGTCCTTGACTATTGCACGATGCTCAGGTTATGGTG
Unaligned ( gi|36 ): ATGGTTATCTCTCTCATCATATACAGTAAGATACATGTGCTGTATCCCAGAATAAACGCCCCTGCTGGTAATGCAGGGGGTGTGTGTGTGTGTGGGGGGGGGGGCGGG
Unaligned ( gi|41 ): AAATGTATCTTTAAATTTACCAATATAAATAACATACATTTATAAACTAAAAGGCCCTAAAACGTACAACAAAA
Unaligned ( gi|42 ): ATATATAGCTGCGCGCGTGACGTAGGTTCTCCCCCTTGAGTATACTGCACTTCG
Unaligned ( gi|43 ): GAATTTACCAATGAGCTATTGAATACAGATCTCAAGACACATAAAA
Alignments
lowQualScore : 444444444444444 111111 11111 11 11111 11111111 22222 222222222222222 111111 6666666666666666666666666 111 11 8888888888888888888888888888888888888888888888888888888 11111111111 11111111 1111 444444444444444444444444444444444444 222222222222222 55555555555555 1111 11 4444444
lowQualScore : 6 5 333333333333333 444444 0 11 1 00000 1 6 3 7777 3 7777 5 11 55 00000 7777 99999 3 11111111 555 2 2 77 66666 33 777 3 555555555555555 5 3 444444 2222222222222222222222222 4 888 1 4 55 9 2 22 444 2 2 66666 999 66 2 2 5 0000000000000000000000000000000000000000000000000000000 555 1 33333333333 0 444 777777 99999999 2 2 33 33 2 333 2 00000000 55 3 88 5 2 2 1 0 0000 88 0 1 66666 444 777 5555 2 2 1 2 6666 1 2 0 0 0 3 2 0 3 1 3 777777777777777777777777777777777777 2 6666 6666 000000000000000 3 99999 2 0 00000000000000 3 1 2222 5 1 11 2222222 888 5 3
lowQualScore : . . ............... ...... . .. . ..... . . . .... . .... . .. .. ..... .... ..... . ........ ... . . .. ..... .. ... . ............... . . ...... ......................... . ... . . .. . . .. ... . . ..... ... .. . . . ....................................................... ... . ........... . ... ...... ........ . . .. .. . ... . ........ .. . .. . . . . . .... .. . . ..... ... ... .... . . . . .... . . . . . . . . . . . .................................... . .... .... ............... . ..... . . .............. . . .... . . .. ....... ... . .
lowQualScore : 7 7 444444444444444 444444 4 99 0 00000 0 0 6 7777 6 7777 1 00 55 00000 1111 77777 1 22222222 000 5 9 99 44444 99 111 3 000000000000000 0 4 555555 9999999999999999999999999 0 000 4 0 55 2 9 55 777 7 7 77777 333 88 9 7 3 0000000000000000000000000000000000000000000000000000000 000 0 44444444444 3 888 777777 11111111 5 1 22 11 2 777 2 33333333 88 0 44 0 5 5 2 3 6666 33 3 5 77777 777 333 7777 7 9 6 9 1111 6 3 8 7 2 7 8 2 1 2 1 111111111111111111111111111111111111 4 5555 5555 555555555555555 3 55555 4 4 00000000000000 0 0 1111 7 0 99 7777777 111 7 7
consensus : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAG--------A--AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
Reference ( family-2882 ) : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAG--------A--AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
gi|1 : TAGTTGCAACAAAGGTTTTCCAT-----ATAATGTAGCTACGAGCAAAACAT-TAT----ATGAAACAAAATATT-TGAAAGACAG----ATGCAATGATTTTTTT--TTA-TGAACTAAATAACCT-----GTGGTTGATAGATAGTAAGAAAG----AAAC----AAACAAACA-AGTTGGGAAC---ATAAT-TAACCACAAGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCCCAA-----------TATAATCGCGT----GAACTT--CAAC-TTTC---AC--------------CAACGCAAAAA-T---TCGAA-TAA--GTGGTGTTTAAAA-A--TCTAACAT---TTT-GTGTATTTCT---TCATTAT-----AGA---TTATACTTTTAATGTAGCAGGTATACTA--AAAGTTCT-GA-TT-TTATAGCATGTA----AG--------A----------A----------A-------AA---ACAGTATAAAAAA--AGAAAAA-A-AC------ATT--------CG---------CG--TAAACG--TCA-AT--AA-AATAT--------GACTGATTTTCACGAAAGACGAA--G-G------AAGCGACAACA-AAGATGAGTCTTTGCGAGAGTTCAAGTCAATATTTTAAAT-----AATCAAAGAAAGT---A---TACT----A-CCTTTTCAAAGTATTGTAG--------GTT-ATTAA------------------AATCAGACGTCAATCTGAAATCGT---------------ACTT---TTTTT----TAA-A---------------A----A--A----AA--------ATGGCGGTCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA-------G-------G-GACTA----TTTTTATCGTTGCAATTCTAATG
gi|10 : tgtaacattttcagatagtttcgattcattattgttttatttaggtctatattccaatcattttaaaaatcaattgtatacattttcaaaatgaagaacaaatgattttttttcattacagttaatgaaaattattaattgcacttactaattcaatgttaacaccatgaaccatgaatatttgttggctacataattgttttattgactgttatagaaaaaacagatctaaagacatttataatttttagttggtgatgacataactgtatacagttttgattctttttttattgtatgccattttggtatcataaaccagcacattcgtgaatacacttgatcaTT-AAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAAGCCTACTA--GAAGTTCTCAA-TT-T----------A----TAGCATATGTA----------T----------A-------AT---AAAG--------G--AAAAAA--T-AC------ATT--------CGTACG-ATAGCG--TAAATG--TCA-AT--AA-AAA-T--------GACTAATTT-CACGAAC--------------------------CG-CACATTGCCCTTTGCGTGAGTCCAAATTGATATTTTAAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTACTCCAGG-CTTTCTTGT-ATTAAT----ATAAATAATTCCAAATTGATCATCAATCCAAAATCATAGTATTGAGACCACAAATTCAATTTTCT-CCTGC-ATT---T----TACAAA----A--A----AA--------ATGGTAGCCAAAATATATTTATTTTTGCTTC----GGACACT----GAA-------G-------G-GATTA----TTT------TTGCTATACTAATGCAC------T-------TTTAA
gi|11 : TCAATTGCATGACAA------TAGTTGCTATGTTAGTTGCAACAGATGTCTTCCAT-----ATAATGTAGTTACGACCATTAAAT-AAT----ATAAAACTAAATATT-TGAAAGACAG----ATGAAAT--TCCTTTT--ATAATAAACCAAA------------TGAT--ATAGATAGAAAGAAAA----AATT----GAACAAACA-A--------CATGATAGTATAAC-ATGGGTTGCCTC-ACTTT--T--A--CTCTTAAGACATC-C-CCC---A-----------TATctgtagtcatccacaattcatgtcattt
gi|12 : accaatgagctcatggatacagatcgaaagacaaatagaaaatcattttggtataataatgaaactattttttaattcaaatagatgatgatctatggataatttttagtttgtgatgacataattgtatacagttttgtttctttgtttttttattgtatgcctttatgatataaaaaaaaccaacacattgataacccg-CACAT-TTATGACC-----A--------ATCAAACCCACGATCA------TTGATGCTATTTTAGTTGCAACAGAAGTCCTCCAT-----ATATAGTAGTAACGACCACAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--CTATTTT--ATAATAAACAGAACAACTT-----GTGGTTAATAGAT----AGAAAG----AAAC----GAACAAACA-A--------C---GTAGTATAAC-AAGGGTTGCTTC-AC--TTGT--A--CGTTTGAGACG-A-C-CCC---
gi|13 : actaatgaactcataatacagatcgaaaggtagatacaaaaaatggttacaataatgaaattattttttaattcaaatagatgatgatctatgaatactttttagttggtgatgacataattgtatacagttttttttttttttttttttttttcattttttattttattaaccaaA-TT-T----------A----TA--------A----------A----------A-------AA---AAAG--------AAGAAAAAAA-T-ACTTTATAATTATATAAAACGTAAA-ATTACG--TAAACG--TGA-AT--CG-AAAAT--------GACTGATTTCCACAAACGACGAA--ACG-GG-TGAACC----ACA-ATCAGTGGCCTTTGCGCGGTTTCAAA-CGATATTTTGAAT-----GAACAAAGCAAGT---G---TATT----A-CTTAATTAAAG-ATTCCAGC-A-TTCTTTT-ATTGAT----TTTAATATTGCCGAATGAAACGTCAATCTGAAATCGTGGTATTGAACCCATAATTTCATGTTTCC-CCTGC-GTT---TTAACC----A----A--A----AA--------ATGGCGACCAAAATAGATTTATCAAAGCTTG----AGACGCT----GAA------AGC------G-GACTA----CTTTCACCGTTTCTATcacat
gi|14 : tttatagcacTTATAT-CATAAACCA---ACACATTGACA-ATCCATCAAATACATGATCACAGACTTAGTTGTTATGTTAGTTGCAACAAA-GTCTTCCAC-----ATAATGTAGCTATGAGTATAAAAT-CAT----ATCAAACAAAATATT-TGAAAGACAGAGCTATGCAAT--TTATTTT--ATAATAAACCAAACAAC--------------ATA---AAAAACAAAG----AAAC----GAATAAACA-A--------C---ATAGTATAAT-ACAGgtagggttgcgtactaaaatgatcgtgtgggtcctggctg
gi|15 : gagctcatgaataaatacagatccaaagactggaagatattttgttacaataatgaaaatatttttataattcaaatagatctaaatgatgatctatggatattttccagttttagctggttatgtcataattgtatacagttgtttctttttttattgtatgcctttt-CACAT-TCATGAAT-----GG-A-CT--ATCAAACACATGATCA------TAGTGGTTATGTTAGTTGCAACAAAAGTCTTCAAT-----ATAAT-----TA---ACATAGAAA-CAT----ATAAAACAAAATATT-TGAAAAACAG----GTGCAAT--TTATTTT--ATAATAAACCGTACATCCT-----GTGTCTGATAGATAGAAAGAAAGAATCAAAC----AAACAATCA-A--------C---ATAGTAAAAC-ATTGGTTGCCTC-CC--TTCT--A--CATTTGAGATG-A-C-CCC---
gi|16 : tctacaggaagattgaaagaaattttgttataataatgaaaatacttttttaattctaaatgtaaatattttagttggtgatgacataactgtatttagttttgattatttttttaaatgcacgcctttttgatatcataaaccaaGTCTTCAATGACAAATAATGTAGCTACGCGCATGAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTTTTAA--ATAATAATTCAAACATCCT-----GTGGTTGATAGATAGAAAAAATG----AAA------AAAAAACA-A--------C---ATAATATAAC-ATGGGTTG
gi|17 : taggtctatttttttttatcatcttcaattgtatgcatatttaaactgaagaatagaagatttttttttcaattacagttaacgaaaattattaattgcacttactgattcaatgttaatatcataaaccatccatatttgttggttacagttttgatgctttttcttgttgtatgcctttttgatatcataaaccaacacattcat-CACAT-TCATGAAT-----GGCC--T--ATCAGACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGAACATAAAAT-CCTACTCATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--TTATTTTAAATAATAAACCAAACAACCTGGAGAGTGGTTGATAGACAGAAAGAAAC----AAAC----AAA
gi|18 : tctaaagacaggtaaaagaaattttattataataatggaaaaatattcttttaattcaattataaatggatattttctaattttttagttggtgatgacataactgtatacagtttttattctttttttttattgtatgccttttcaatatcataaaccaa----------A----AA--------A----------A----------A-------AA---CCAG--------A--CAACATA-T-AC------AT------------ATA-AAAGCA--TTAACA--TTA-AT--CG-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-A-----------------------TTT-CA-GAG---AAATCGATATTTCGAAT-----AAACAAAGCAAGTTCAA---CACT----G-CA-----AGAGTATTTTAAT-CTTTTTTTTTATTAAT----ATGAGTA-TTTCTAATCGAATATCAAACTGAAATTGCGGTACTGAGATCACAA----AA----TC-CAAAC-------C----C----A----AGGA----AA--------AT-GCGACTACAATATATatag
gi|19 : tatagatgcaattatataaatacacacttagcacacgctaagatcagactttatagcacatataatataaaaaacacacacCG--TAAATG--TAA-A---AA-AAAAT--------GACTTATTTTCATGAATGATGAAC-A-C-AG-AAAAA-----ACA-AACATTGGCCTTTGTGCTTATTCAAGTAAGTATTTTGAAT-----ATACAAAGCAAGT---A---CACT----A-CCTTTTTAAAGTATGCTAAC-C-ATCTTTA-ATTAAT----ATAAATAATTCCGAATTGAATGTCAATCTGAAACCATGGTTTTGAGATCATAATTTCAATTTTCC-CCTGC-ATT---T----C----AC---A--A----AAAAAGAAATATGGCTGCCAAAATATATTTATCGTCACTTG----AGATGCT----AAA------AGATGGGCTG-GAATA----TTTTTACAGTTG-----CTGATGTGCAGTAGTTG------TTTGAATTTcatttcagcacgg
gi|2 : TTATATTCATAC-CCATAAAC-----AGCA-AT--ATTACACACATGATCA------TAGTTTTTATGATAGTTGCAACAAAAGTATTCCAT-----ATAATATAGCTACGACTATAACAT-CAT----ATAAAATAAAATATT-TGAAAGACAG----ATGAAATATTTATTTT--ATAATAAAA-AAACAACCT-----GTGGTTGATAGATAGAACAAAAG----AAAC----GAACAAACA-A--------C---ATATTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAAACT-A-C-CAC---A-----------TATAAT-GTGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGAAAAAA-A---TCGAA-CAA--ATGGTGTT-AACT-A--TCTAATAT---TTTGGCATGTATTT-CGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGACATACCA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---AGAG--------C--AAACAAA-TGAC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AG-AAAAT--------GACAGATTTTCACGAATGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGTCTTTGCACGCGTTCAAATCGATATTTTAAAT-----AAACAAAGCAAGA---AGAGTACT----C-CATTTTTAAAATATTCCAGCATTTTGTTTT-ATTCAT----ATAAATAATTCCGAATCGAAAGTCAATCTTAAATCGTGGTATTGAGACCACAATTTAAATTTTTC-CCT---------------------------A----GA--------ATGGCGGCC-----ATATTAATCGTCACTTG----GGACGCT----AAA------GG-------G-GACTA-----TTTTATCGTTGCTATACTAATGCGC------TG------TCTGCATTGCATGT
gi|2 : acttgtattataaATTAAATCG---TGAAATGAATAACAAA----GATTA-TAGAATAAAATTGTAATAT-TA-GCC--GCACGATTCCTTATAGAAGGCATTCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgaaatgaataacaaagattatagaataaaattgtaatattagccgcacgattccttatagaaggcattcg
gi|20 : acttgtattataattatattcatacccataaacagcaatattacacacatgatcatagtttttatgatagttgcaacaaaagtattccatataatatagctacgactataacatcatataaaataaaatatttgaaagacagatgaaatatttattttataataaaaaaacaacctgtggttgatagatagaacaaaagaaacgaacaaacaacatattataacacgggttgcctcccttacttttgaaactaccacatataatgtgtttctgaccaaatcgcgtgaacaccgaaaaaaatcgaacaaatggtgttaactatctaatattttggcatgtatttcgtcattatagataatactttaaatgtggcagacataccagaagttctgatttaaaaaaaaagagcaaacaaatgacattcgtataatagcgtaaacgtcaatagaaaatgacagattttcacgaatgacgaaagagaaaagcacgaacattggtctttgcacgcgttcaaatcgatattttaaataaacaaagcaagaagagtactccatttttaaaatattccagcattttgttttattcatataaataattccgaatcgaaagtcaatcttaaatcgtggtattgagaccacaatttaaatttttccctagaatggcggccatattaatcgtcacttgggacgctaaaggggactattttatcgttgctatactaatgcgctgtctgcattgcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGTCAAAATATATTTATAGTTGCTCATAATGAACGCT----AA----------------G-GACTACTACTTTTTAGCATTGCTAAACTAATGTGC------AG------T
gi|20 : ATGAAATTACCGTCAACAGAATAACAAA----GATTA-GAGAACAAAATCGTACT-T-TGGGAC--TCATGA-TCACAATAGAAGGCATTCGagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaatgaaattaccgtcaacagaataacaaagattagagaacaaaatcgtactttgggactcatgatcacaatagaaggcattcgctgtgttccgcttccaaaa
gi|21 : gtcaaaatatatttatagttgctcataatgaacgctaaggactactactttttagcattgctaaactaatgtgcagtagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaa-AAAA-A--TCTAATATATATTT-TTTTTTTTTT------TTAT-----AGA---TAGTACTTTAAATGTGGCAGGCATACCAG-GAAGTTTT-GATTT-T----------A----TA--------G----------C----------A-------CATGTATAA--------A--ACAACAA-C-AC------AT-----------TATT-ATAGCG--TAAACG--TCA-AT--AATGAAAT--------GACTGATTTTCACAAACGctgtgttccgcttccaaaa
gi|23 : ttgatgtatattaactaaaatgcaataagattattatctaaaaatgtgtatttattgatatttaaaagttattttgcattttaaaatatttgttactgaa-T-AC------ATT--------TATATT-A-AGCGATTTACCGAATCG-AT--TA-AAAATATCATCTGGACTGATTTTCATGAACGACGAA--A-G-AG-GTAAGC----TCA-AACATTGTCCTTTGCGCGAGTAAAAATCGATATATTGAA------AAAAAAAGCAAGT---A---TACT----A-CA-TTTTAAAGTAGTTAAAT-TATTCTTTG-GTTAAT----ATGAATAtttnnnnnnnnnnatacaacatcagtgatcttgctcctgaaatacacaattaacatgagtaa
gi|24 : gatgttttgtattgtgacatgtgatgttgccgtcaatgtaatcatgtagaaggtcattatgcatatgaatattaaaattacagctTGTTAT---AGTTGCAACAAAAG---------------------GCTACGAACAT------CAT----ATAAAACAAAACATT-TGAAAGTGAG----ATGTAc
gi|24 : aaacacaAACA--TCATAT--AA-AACAA--------AAC--ATTT----GAAAG-TGAG--ATGTAG-GAAAGC----ACA-AACATTGGCCTTTGCGCGAGTTCAAAACAATAGTTTGA-T-----CAACATAGAAAGT---A---TACTTACTA-CCTTTTTAAAGTAATCCAGC-TTTTCTTTT-ATTAAT----ATAAA----TCC---------------CT-AAATCGTTGTATTGGGACCACAATTTTAATTTTTC-CCTAC-ATT---T----T----AT---A--AAAACAA--------ATGGCGGCAAAggaaagcacaaacattggcctttgcgcgagttcaaaacaatagtttgatcaacatagaaagtatacttactacctttttaaagtaatccagcttttcttttattaatataaatccctaaatcgttgtattgggaccacaattttaatttttccctacattttataaaaacaaatggcggcaaaca
gi|25 : aaacacatgttatagttgcaacaaaaggctacgAAATCGTGGTCAACAAAATAAAAAAAAAAGATT----GAACAAATT--TAATATACAGGCA--ACATGA-TCCCTATAGAAGGC-TTCGca
gi|26 : tcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAATCGCCGCCCACAGTATAACAAA-----ATTAATAGAACAAAACCATAA-----ATGCCCATCATGA-TCACTATAAA
gi|28 : gtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnA-A--------C---ATAGTATAAC-ACAGTTTGCCTC-CC--T--CC-A--CTTTC-AGATG-A-C-CCCC--A-----------TATAAT-GTGTTTCTGA---CTACAAA--------AA--------------CACTGCAAAAA-AA--TCAAAACAA--GTGGTGTTGAAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTATTATATAAA---TAAAACTTTAAATGTGGCAGGCATTCTA--GAAGTTCT-GA-TT-T----------
gi|3 : TAGTATAAC-ACGTGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCTCAA-----------TGTAAT-GTGTTTCTGA---CTTCAA---CAC-------------------CACCGCAAAAA-A-----AAA-CGA--GTTGTGTT-AAAA-AA-TCTAATAT---TTT-GAAT-TTTTT-TGTCATTGT-----AGA---AAATATTTGAAATATGGCGGG-ATGCTA--GAAGTTCT-GA-TT-T----------T----AT--------A----------G----------C-------AC---AT-G--------T--ATAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-ATAAAA-AAAAT--------GACTGATCTTTA-GAATGACGAA--A-A-GG-AAA--C----AAGAAACATTAACCTTTGCGTGtacagcacatgtataaaaag
gi|3 : GATCTTTAGAATGACGAAAAGGAAACAAGA---AA--CATT----AACCTTTGC---GTGTTTCACC-CTTTCTTTA-ATTAAT----ATAAATAATTCCGAATTGAACGTCAATCTGAAATCGTTGTATTGAGACCACAGTTTCAATTTGTC-CCTAC-ATT---T----TACCAA----A--A----AA--------ATTGTGGCCCAAATATATTGATCGTCGCCTG----GGCCGCT----GAA------Gtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|3 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactGAAATCGCCGCCAACAGTATAACACA----GATTA-TAGAACAAGGTCATAAAA---GTGCC--TCACGA-TCGCTGTAGAAGGTATttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|30 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaTAGTATAAC-ATGTGTTGCCTC-CC--T--TCCA--CTTTTGAGATG-ACC-CCC---A-----------T-TAAA-ATGTTTC-GA---C--------------AC--------------CACCACAACAA-A---TCAAA-CAA--GTGGTGTT-AAAAGA--TCTAATAT---TTT-GTATGTTTTT-CGTCATTAT-----AGA---TAATACTTTAAAATTGGCAGGTATACTA--GAAGTTCT-GA-TT-cgctacgataacactacgctagcctttcaataaa
gi|31 : -CACAT-TCATAAAT-----G--------ATCAAACACATGACCA------TAGTTgtatagcacatgtataaaaaac
gi|32 : agttctaaagacagataaaagaaatttagttatgataatgaaaatatctctttgattcaattatatagatattttctaattttgagttgatgacgacataactgttttgatttatttttttattgtatgcctttttaataaaataaaccaaAA-A--TCTAATAT---TTT-GTATGTTTT--CGTCGTTAT-----AGAAGGTAATACGTTAAATGTTGAAGGTATATAA--CAAGTTCT-GA-TTGT----------ATGGCAC--------A----------AGTATG-----A-------AA---ATAA--------A--AGAAAAC-A-AC------ATA--------TGTATA-ATAGCT--TAAACG--ATA-AT--CA-AAAGT--------GAC-AATTT
gi|34 : T--------CGTATA-ATTGCG--TAAACG--TCA-AT--TA-ATAATT-------GACATATTTTCATGAATTACGAA--A-G-AG-AAATGC----ACA-GA-GTTGACCTTTGTGTGAGTTCATCTCATTATTTTGAAG-----AAACAAAGCAAGT---A---TACT----A-CCTTTTc
gi|35 : ATGAAATCACTGTCAGCAGTATTACACA----GGTTA-TATAACAAATT-GTACT-T-TGTGTC--CCACCA-TCACTATAGAAGGTATTC
gi|37 : ttgaaacgtttggaactattttatcaggcggtggaaCAAAATGTATTTATCGTCACT-------GAAG------GAG------GGA------G-GACTA----TTTTTACCGATACTATACTTAAGCGC------GGTAGTCATTTGAATTTCATGTac
gi|38 : -AAAA-A--TCGAATAT---TTT-GTATGGTTTT-C-TCGTTAT-----AGAAGATAATACTTTGAATGTGGCAGGTACACcattttagtggaagctg
gi|39 : gcagactgagagatcaacgttttctgAATCACAGTCAACAGTACAACAAA----GGACA-TAGAACAAACTC--AA-AC-C---TC--TCACAA-CGACTATAGAAGG-ACTCGctatt
gi|4 : TAATAAACAAAAAGAAAT----AAACCTAGAAAGAAAGA-A--------C---ATAGTATAAC-ACGG-TTGGCTCACT--T--T--A--CATTTGAGATG-A-C-CCC---ACCATTATGGCATATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAAG-------------CA--GCAAAAA-AAAATC-AA-CAA--AAGGTGTTTAAAA-A--GCTGAAAT---TTT-ATATGTTTTT-CGTCGTTAC-----AGA---TAATACTTTAAATGTGGCAGACATACTA--GAAGTTCA-AA-TT-T----------T----AA--------AGTAAATGTATA----------A-------AA---AAAG-----------ACAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAATT--TCA-AT--AA-AAAAT--------GACATATTTTCACGAATGGCGAA--A-G-AGAAAAAGC----AT--AGCGTTTACCTTTGTGCAAGTTCAAATCGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAACTATTCCAGC-CTTTCTTTT-ATTAATATTCATGAATAATTCCTAATTGAATGTCAATCTGAAATTTTGTTATTGAGCCCACTATTT-AATTTTTC-CCTAC-ATTTTAT----C----A----A--AAC--AA--------ATGACGGCC-----ATATTAATCGTCGTTTG----GGACACT----TCA------GG-------A-AAATA----TTT------------TACAAATGCGC------AG------TTttatggtttgccttccaa
gi|40 : atttaaattaCCT-----GCGGTTGATGGATAGAAAGCAAG----AA-C-----AACAAAC-------------------TATAAC-ACGAGTTGCCTC-AC--TTAT--A--CTTTTGAGACG-ACC-CCC---A-----------TATaaagggtgggaacctacgtgcatgtgacataggttctccctcttgcagtagtcatttgc
gi|5 : AATGTAGTTACGACCATTAAACACAT----ATAAAACAAA-TACTGTGAAAGACAG----ATG-ATT--TTATTTA--AAAATCAACCAAACAACCT-----TTGGTTGATAGATAAAAAGAAAG----AAAC----GAACAAACA-C--------C---ATAGTATAAC-ACTGATTGCTTT-AT--T--T--ATACTTTTGAGACGTG-T-CCC---A-----------TATAAT-GCATTTCTAA---C--CAAAATCGTACGAA--------------CACCGCAAAAA-AAACGCGAG-CAA--GTGGTGTT-AAAA-AG-TCTAGTAT---TTT-GAATGTATTT-CGTTGTTAT-----AGA---TAATGCTTTAAATATGGCAGACATACTAAAGAAGTTTT-GA-TT-T----------T----AA--------A----------A----------C-------AC---ATAT--------A--CAAAA---T-GC------ATT---------ATATACAT-TCG--TTAACG--TCA-AA--AG-TAAAT--------GACCGATTTTCACAAATAGCGAA--A-G-AG-AAAAGC----ACA-AACATTGACCGTTACG---GTTCAAGTCGATACTTTGAAT-----AAACATAGCACGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCGTTT-ATTTAT----ATGTATAATTCCGAATCGAACGTCAATCTGAAATCGTAGTACTGGGACCACAAATTCAATTTT-C-ACTAC-ATT---T----T----ATAACA--A----CA--------ATGGCGGCCATATTAT---TA--GTCGCTTA----GGCCGCC----GAA------GG-------GAGAGGG----GT---ACCGTTGCTAT
gi|6 : AAAAA-C---TCGAA-CAAAAGTGATGTT-AAAA-AA-TCTAATAA---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGCGACAGGCATACAA--GAAGTTCT-GA-TT-T----------T----AC--------A----------GCACATGTATGA-------AA---AAAG--------A--CTAAAAA-C-TC------ATT--------CGTATA-AAAGCG--TAAACG--TCA-AT---A-AAAAT--------GACTTATTTTTATAAAAGACGAAC-A-C-GG-AAAATA----ATA-AACATTTGTCTTTGCGCGAGTTCACATTGACATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-TCTTTTTAAAGTTTTCCAGC-CTTTC-TTT-ATCAAT----ATAAATAATTCCGAAACGAACGTCAATTTAAAACCGTGGTATTGAAACCACAA-CTCAATTTTTTACCTGCAATT---T----CCAA-A----A--A----AA--------ATGGCTGCCAAAATATATTTATCGTCACTTG----GGACACTGAAAGAA------GG-------G-GACTA----TTTCTACCGTTGCTATATTTATGAGCAGTAGTCG------TTTGAATTTCATGTcataa
gi|7 : -CCATGAAA-----GACACAT--A--AAACACATGATCA------T------TATAATAGTTGCAACAAAAGTATTCCAT-----ATAATGTAACTACGAGCAT-AATT-TAT----AAATAACAAA--ATT-TGAAAGACAG----GTGCAAT--TTATTTT--ATAATAACCCAAACAAaatttttgtgtaaactgtatgatttgactaccacatacttgaagtttttgactctctgttagatagaacaaaaatcgcaatacaaatttggatttctacgtcttctgctattgcaatagagctaaact
gi|7 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaC----AAACAAACG-A--------C---AATGTATAAC-ACGGATTACCAC-TC--T--TCTA--CTTTTGAGACG-A-CTCCC---A-----------TATAAC-TTGTTTCAGA---C--CAA---TGCGTGAAATTGCATATTTCACCACCACAAAAC-A---TCAAA-CAA--ACATTGTT-AAAA-AAATTCAATAA---TTT--TATGTTTTTTCGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GGAGTTC---A-TA-T----------A----GC--------A----------C----------ATGTATATAA---AACG--------A--AAAAAAA-T-AC------ATT--------CGTATT-AAAGCA--CAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-GTAAGCGATAACG-AAacgacaatgtataacacggattaccactcttctacttttgagacgactcccatataacttgtttcagaccaatgcgtgaaattgcatatttcaccaccacaaaacatcaaacaaacattgttaaaaaaattcaataattttatgttttttcgtcattatagataatactttaaatgtggcaggcatactaggagttcatatagcacatgtatataaaacgaaaaaaaatacattcgtattaaagcacaaacgtcaataaaaaatgactgattttcacgaacgacgaaagaggtaagcgataacgaa
gi|8 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaccatgaaagacacataaaacacatgatcattataatagttgcaacaaaagtattccatataatgtaactacgagcataatttataaataacaaaatttgaaagacaggtgcaatttattttataataaccTGGTTGCCAACTAGATAGAAAG----AAAT----AAACAAACATA--------C----TAGTATAAC-ACTGATTGCCTC-TC--TC-C--A--CTT
gi|8 : t--------------CACCGCAAAAGCA---TCGAA-CAA--GTAGTGTT-AAAA-A--ACTAAAAT---TTT-GTATGTTTTT-CGTCATTGT-----AGA---TACTACTTTAAATGTGGCAGGCATACTT--GAAGTTCT-GA-TTGT----------ATAGCAC--------A----------AGTGTG-----G-------AA---AAAG--------A--AAAAAAATT-AC------CTC--------CGTTTA-AAAGCG--TAAAAG--TCA-AT--AA-TAAAT--------TACTTATTTTCACAAAATACGAATCC-G-TA-AAATAA----ACG-AACATTTGTCTTTGCTCGAGTTCAAATCGATATTTT-AAT-----AAACAAAGCAAAC---A---TGCT----A-CCCTTTTATAGTATTTTAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGATACTCTGAAACCGTGGTATTTAGACCATAATTTCGATTACTG-TCTGC-ATT---TTA--C----A----A--A----AAAAAAT---ATGGCTGCCAAAATATATTTATCGTCACTTT----GAACGCT----GAATGAGTGGG-------G-AACTA----TTTTTACCGTTGCTATATTAATGCGCAGTAGTTG------TTTGATTTTAATGTcaccgcaaaagcatcgaacaagtagtgttaaaaaactaaaattttgtatgtttttcgtcattgtagatactactttaaatgtggcaggcatacttgaagttctgattgtatagcacaagtgtggaaaaagaaaaaaaattacctccgtttaaaagcgtaaaagtcaataataaattacttattttcacaaaatacgaatccgtaaaataaacgaacatttgtctttgctcgagttcaaatcgatattttaataaacaaagcaaacatgctacccttttatagtattttagcctttcttttattaatatgaataattccgaatcgaacgatactctgaaaccgtggtatttagaccataatttcgattactgtctgcattttacaaaaaaaaatatggctgccaaaatatatttatcgtcactttgaacgctgaatgagtggggaactatttttaccgttgctatattaatgcgcagtagttgtttgattttaatgt
gi|9 : ttggttgccaactagatagaaagaaataaacaaacatactagtataacactgattgcctctctccactt---ACAGTATAAC-ATGGGTTGGCTC-CCTTT--T--A--CTTTTGAGATG-
gi|9 : T---TTT-GTATGTTTTT-CGTCGTTAA-----AGA---TAATACTTCAAATGTGGCAAGCATACTA--GAAGTTCT-AA-TT-T----------T----AA--------AGTAAATGTATA----------A-------AA---AAAG--------A--AAAAAAA-C-AC------ATT--------TGTATA-ATAACG--TAAATG--TCA-AT--AA-AAAAT--------GAC--ATTTTC-------GCGAA--A-G-AG-AAAAGC----AC--AACGGTGACCTTTGCTCGAGTTAAAATTGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTA-ATTAAT----ATAAATACTTCTGAATGGAATGTTAATCTGAAATTGTGGTATTGAGCCCACAATTTCAATTTTAC-CCTGC-ATT---TTAC-C----A----A--AAC--AA--------ATGGCAGCC-----ATATTAATCATCGTTTG----GGATGCT----TCA------GG-------G-AACTA-----TTTTACTTATG-TGCAGTAGTGCGC------ttttgagacttttgtatgtttttcgtcgttaaagataatacttcaaatgtggcaagcatactagaagttctaattttaaagtaaatgtataaaaaaagaaaaaaaacacatttgtataataacgtaaatgtcaataaaaaatgacattttcgcgaaagagaaaagcacaacggtgacctttgctcgagttaaaattgatattttgaataaataaagcaagtatactacctttttaaagtattccagcctttctttaattaatataaatacttctgaatggaatgttaatctgaaattgtggtattgagcccacaatttcaattttaccctgcattttaccaaaacaaatggcagccatattaatcatcgtttgggatgcttcagggaactattttacttatgtgcagtagtgcgcgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): TCGGCCTCGTTATTGATTTAAAACTGTTTACAACTAAAATTCTGTAACACTTTCAGATATTTTGGATCGTTTTTGTTTTTATTTAGGTCTATTTTTTCATCATCTTAAAAATCAATTGTATGCATTGTCAAAATGAAGAACAAATGATTTTTTTTTCAATTACAGTTAATGAAAATTGTTAATTTCACTTACTGATTCAATGTTAACACCATAAACCAGTCATAATTGTCGGTTACAGATTGTTTTTAGTGAATGATTATAAAAAACACACAAAAAAAACCACAAAAAAACCCCA
Unaligned ( gi|27 ): ATTTCATGCCTTCTTGGAATATTAATATAGATTTCTCAGTCAATCGTTTTCCACTGTACTATTATTTAAAATAGTAAAATTATAAATGTTAATTTCACAAAGTTCACAGAAAATAATTATGTTCTCAAATATATTAATATCCATATTATCATATACTCCTGAATAAACCCACTTGGGGGTTGGGGTGGAGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGG
Unaligned ( gi|29 ): TTACCAATGAGCTCATGAATACAGATCGAAAGACAGATAGAAAGAAATTTTGTTATAATGATTTTTTTTAAATGATGATCTATGGATATTCTAATTTTAAGTTGGTGATGACATAATTGTATACATTTTTCTTTTTTATTGTATGTCTGTTTGATATCATAAACCAACGCATAGAAGACCCATCCAACACATTGTA
Unaligned ( gi|33 ): TGATGTATATTAACTAAAATTAGAGTATATTTATAAATGTATTTTTATAGATATTTAAAAGTTATTTCACATTTTAAATTATTTGTTAATGAAAAAAAGATGTCCTTGACTATTGCACGATGCTCAGGTTATGGTG
Unaligned ( gi|36 ): ATGGTTATCTCTCTCATCATATACAGTAAGATACATGTGCTGTATCCCAGAATAAACGCCCCTGCTGGTAATGCAGGGGGTGTGTGTGTGTGTGGGGGGGGGGGCGGG
Unaligned ( gi|41 ): AAATGTATCTTTAAATTTACCAATATAAATAACATACATTTATAAACTAAAAGGCCCTAAAACGTACAACAAAA
Unaligned ( gi|42 ): ATATATAGCTGCGCGCGTGACGTAGGTTCTCCCCCTTGAGTATACTGCACTTCG
Unaligned ( gi|43 ): GAATTTACCAATGAGCTATTGAATACAGATCTCAAGACACATAAAA
Alignments
lowQualScore : 444444444444444 111111 11111 11 11111 11111111 22222 222222222222222 111111 6666666666666666666666666 111 11 8888888888888888888888888888888888888888888888888888888 11111111111 11111111 1111 444444444444444444444444444444444444 222222222222222 55555555555555 1111 11 4444444
lowQualScore : 6 5 333333333333333 444444 0 11 1 00000 1 6 3 7777 3 7777 5 11 55 00000 7777 99999 3 11111111 555 2 2 77 66666 33 777 3 555555555555555 5 3 444444 2222222222222222222222222 4 888 1 4 55 9 2 22 444 2 2 66666 999 66 2 2 5 0000000000000000000000000000000000000000000000000000000 555 1 33333333333 0 444 777777 99999999 2 2 33 33 2 333 2 00000000 55 3 88 5 2 2 1 0 0000 88 0 1 66666 444 777 5555 2 2 1 2 6666 1 2 0 0 0 3 2 0 3 1 3 777777777777777777777777777777777777 2 6666 6666 000000000000000 3 99999 2 0 00000000000000 3 1 2222 5 1 11 2222222 888 5 3
lowQualScore : . . ............... ...... . .. . ..... . . . .... . .... . .. .. ..... .... ..... . ........ ... . . .. ..... .. ... . ............... . . ...... ......................... . ... . . .. . . .. ... . . ..... ... .. . . . ....................................................... ... . ........... . ... ...... ........ . . .. .. . ... . ........ .. . .. . . . . . .... .. . . ..... ... ... .... . . . . .... . . . . . . . . . . . .................................... . .... .... ............... . ..... . . .............. . . .... . . .. ....... ... . .
lowQualScore : 7 7 444444444444444 444444 4 99 0 00000 0 0 6 7777 6 7777 1 00 55 00000 1111 77777 1 22222222 000 5 9 99 44444 99 111 3 000000000000000 0 4 555555 9999999999999999999999999 0 000 4 0 55 2 9 55 777 7 7 77777 333 88 9 7 3 0000000000000000000000000000000000000000000000000000000 000 0 44444444444 3 888 777777 11111111 5 1 22 11 2 777 2 33333333 88 0 44 0 5 5 2 3 6666 33 3 5 77777 777 333 7777 7 9 6 9 1111 6 3 8 7 2 7 8 2 1 2 1 111111111111111111111111111111111111 4 5555 5555 555555555555555 3 55555 4 4 00000000000000 0 0 1111 7 0 99 7777777 111 7 7
consensus : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAG--------A--AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
Reference ( family-2882 ) : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAG--------A--AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
gi|1 : TAGTTGCAACAAAGGTTTTCCAT-----ATAATGTAGCTACGAGCAAAACAT-TAT----ATGAAACAAAATATT-TGAAAGACAG----ATGCAATGATTTTTTT--TTA-TGAACTAAATAACCT-----GTGGTTGATAGATAGTAAGAAAG----AAAC----AAACAAACA-AGTTGGGAAC---ATAAT-TAACCACAAGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCCCAA-----------TATAATCGCGT----GAACTT--CAAC-TTTC---AC--------------CAACGCAAAAA-T---TCGAA-TAA--GTGGTGTTTAAAA-A--TCTAACAT---TTT-GTGTATTTCT---TCATTAT-----AGA---TTATACTTTTAATGTAGCAGGTATACTA--AAAGTTCT-GA-TT-TTATAGCATGTA----AG--------A----------A----------A-------AA---ACAGTATAAAAAA--AGAAAAA-A-AC------ATT--------CG---------CG--TAAACG--TCA-AT--AA-AATAT--------GACTGATTTTCACGAAAGACGAA--G-G------AAGCGACAACA-AAGATGAGTCTTTGCGAGAGTTCAAGTCAATATTTTAAAT-----AATCAAAGAAAGT---A---TACT----A-CCTTTTCAAAGTATTGTAG--------GTT-ATTAA------------------AATCAGACGTCAATCTGAAATCGT---------------ACTT---TTTTT----TAA-A---------------A----A--A----AA--------ATGGCGGTCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA-------G-------G-GACTA----TTTTTATCGTTGCAATTCTAATG
gi|10 : tgtaacattttcagatagtttcgattcattattgttttatttaggtctatattccaatcattttaaaaatcaattgtatacattttcaaaatgaagaacaaatgattttttttcattacagttaatgaaaattattaattgcacttactaattcaatgttaacaccatgaaccatgaatatttgttggctacataattgttttattgactgttatagaaaaaacagatctaaagacatttataatttttagttggtgatgacataactgtatacagttttgattctttttttattgtatgccattttggtatcataaaccagcacattcgtgaatacacttgatcaTT-AAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAAGCCTACTA--GAAGTTCTCAA-TT-T----------A----TAGCATATGTA----------T----------A-------AT---AAAG--------G--AAAAAA--T-AC------ATT--------CGTACG-ATAGCG--TAAATG--TCA-AT--AA-AAA-T--------GACTAATTT-CACGAAC--------------------------CG-CACATTGCCCTTTGCGTGAGTCCAAATTGATATTTTAAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTACTCCAGG-CTTTCTTGT-ATTAAT----ATAAATAATTCCAAATTGATCATCAATCCAAAATCATAGTATTGAGACCACAAATTCAATTTTCT-CCTGC-ATT---T----TACAAA----A--A----AA--------ATGGTAGCCAAAATATATTTATTTTTGCTTC----GGACACT----GAA-------G-------G-GATTA----TTT------TTGCTATACTAATGCAC------T-------TTTAA
gi|11 : TCAATTGCATGACAA------TAGTTGCTATGTTAGTTGCAACAGATGTCTTCCAT-----ATAATGTAGTTACGACCATTAAAT-AAT----ATAAAACTAAATATT-TGAAAGACAG----ATGAAAT--TCCTTTT--ATAATAAACCAAA------------TGAT--ATAGATAGAAAGAAAA----AATT----GAACAAACA-A--------CATGATAGTATAAC-ATGGGTTGCCTC-ACTTT--T--A--CTCTTAAGACATC-C-CCC---A-----------TATctgtagtcatccacaattcatgtcattt
gi|12 : accaatgagctcatggatacagatcgaaagacaaatagaaaatcattttggtataataatgaaactattttttaattcaaatagatgatgatctatggataatttttagtttgtgatgacataattgtatacagttttgtttctttgtttttttattgtatgcctttatgatataaaaaaaaccaacacattgataacccg-CACAT-TTATGACC-----A--------ATCAAACCCACGATCA------TTGATGCTATTTTAGTTGCAACAGAAGTCCTCCAT-----ATATAGTAGTAACGACCACAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--CTATTTT--ATAATAAACAGAACAACTT-----GTGGTTAATAGAT----AGAAAG----AAAC----GAACAAACA-A--------C---GTAGTATAAC-AAGGGTTGCTTC-AC--TTGT--A--CGTTTGAGACG-A-C-CCC---
gi|13 : actaatgaactcataatacagatcgaaaggtagatacaaaaaatggttacaataatgaaattattttttaattcaaatagatgatgatctatgaatactttttagttggtgatgacataattgtatacagttttttttttttttttttttttttcattttttattttattaaccaaA-TT-T----------A----TA--------A----------A----------A-------AA---AAAG--------AAGAAAAAAA-T-ACTTTATAATTATATAAAACGTAAA-ATTACG--TAAACG--TGA-AT--CG-AAAAT--------GACTGATTTCCACAAACGACGAA--ACG-GG-TGAACC----ACA-ATCAGTGGCCTTTGCGCGGTTTCAAA-CGATATTTTGAAT-----GAACAAAGCAAGT---G---TATT----A-CTTAATTAAAG-ATTCCAGC-A-TTCTTTT-ATTGAT----TTTAATATTGCCGAATGAAACGTCAATCTGAAATCGTGGTATTGAACCCATAATTTCATGTTTCC-CCTGC-GTT---TTAACC----A----A--A----AA--------ATGGCGACCAAAATAGATTTATCAAAGCTTG----AGACGCT----GAA------AGC------G-GACTA----CTTTCACCGTTTCTATcacat
gi|14 : tttatagcacTTATAT-CATAAACCA---ACACATTGACA-ATCCATCAAATACATGATCACAGACTTAGTTGTTATGTTAGTTGCAACAAA-GTCTTCCAC-----ATAATGTAGCTATGAGTATAAAAT-CAT----ATCAAACAAAATATT-TGAAAGACAGAGCTATGCAAT--TTATTTT--ATAATAAACCAAACAAC--------------ATA---AAAAACAAAG----AAAC----GAATAAACA-A--------C---ATAGTATAAT-ACAGgtagggttgcgtactaaaatgatcgtgtgggtcctggctg
gi|15 : gagctcatgaataaatacagatccaaagactggaagatattttgttacaataatgaaaatatttttataattcaaatagatctaaatgatgatctatggatattttccagttttagctggttatgtcataattgtatacagttgtttctttttttattgtatgcctttt-CACAT-TCATGAAT-----GG-A-CT--ATCAAACACATGATCA------TAGTGGTTATGTTAGTTGCAACAAAAGTCTTCAAT-----ATAAT-----TA---ACATAGAAA-CAT----ATAAAACAAAATATT-TGAAAAACAG----GTGCAAT--TTATTTT--ATAATAAACCGTACATCCT-----GTGTCTGATAGATAGAAAGAAAGAATCAAAC----AAACAATCA-A--------C---ATAGTAAAAC-ATTGGTTGCCTC-CC--TTCT--A--CATTTGAGATG-A-C-CCC---
gi|16 : tctacaggaagattgaaagaaattttgttataataatgaaaatacttttttaattctaaatgtaaatattttagttggtgatgacataactgtatttagttttgattatttttttaaatgcacgcctttttgatatcataaaccaaGTCTTCAATGACAAATAATGTAGCTACGCGCATGAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTTTTAA--ATAATAATTCAAACATCCT-----GTGGTTGATAGATAGAAAAAATG----AAA------AAAAAACA-A--------C---ATAATATAAC-ATGGGTTG
gi|17 : taggtctatttttttttatcatcttcaattgtatgcatatttaaactgaagaatagaagatttttttttcaattacagttaacgaaaattattaattgcacttactgattcaatgttaatatcataaaccatccatatttgttggttacagttttgatgctttttcttgttgtatgcctttttgatatcataaaccaacacattcat-CACAT-TCATGAAT-----GGCC--T--ATCAGACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGAACATAAAAT-CCTACTCATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--TTATTTTAAATAATAAACCAAACAACCTGGAGAGTGGTTGATAGACAGAAAGAAAC----AAAC----AAA
gi|18 : tctaaagacaggtaaaagaaattttattataataatggaaaaatattcttttaattcaattataaatggatattttctaattttttagttggtgatgacataactgtatacagtttttattctttttttttattgtatgccttttcaatatcataaaccaa----------A----AA--------A----------A----------A-------AA---CCAG--------A--CAACATA-T-AC------AT------------ATA-AAAGCA--TTAACA--TTA-AT--CG-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-A-----------------------TTT-CA-GAG---AAATCGATATTTCGAAT-----AAACAAAGCAAGTTCAA---CACT----G-CA-----AGAGTATTTTAAT-CTTTTTTTTTATTAAT----ATGAGTA-TTTCTAATCGAATATCAAACTGAAATTGCGGTACTGAGATCACAA----AA----TC-CAAAC-------C----C----A----AGGA----AA--------AT-GCGACTACAATATATatag
gi|19 : tatagatgcaattatataaatacacacttagcacacgctaagatcagactttatagcacatataatataaaaaacacacacCG--TAAATG--TAA-A---AA-AAAAT--------GACTTATTTTCATGAATGATGAAC-A-C-AG-AAAAA-----ACA-AACATTGGCCTTTGTGCTTATTCAAGTAAGTATTTTGAAT-----ATACAAAGCAAGT---A---CACT----A-CCTTTTTAAAGTATGCTAAC-C-ATCTTTA-ATTAAT----ATAAATAATTCCGAATTGAATGTCAATCTGAAACCATGGTTTTGAGATCATAATTTCAATTTTCC-CCTGC-ATT---T----C----AC---A--A----AAAAAGAAATATGGCTGCCAAAATATATTTATCGTCACTTG----AGATGCT----AAA------AGATGGGCTG-GAATA----TTTTTACAGTTG-----CTGATGTGCAGTAGTTG------TTTGAATTTcatttcagcacgg
gi|2 : TTATATTCATAC-CCATAAAC-----AGCA-AT--ATTACACACATGATCA------TAGTTTTTATGATAGTTGCAACAAAAGTATTCCAT-----ATAATATAGCTACGACTATAACAT-CAT----ATAAAATAAAATATT-TGAAAGACAG----ATGAAATATTTATTTT--ATAATAAAA-AAACAACCT-----GTGGTTGATAGATAGAACAAAAG----AAAC----GAACAAACA-A--------C---ATATTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAAACT-A-C-CAC---A-----------TATAAT-GTGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGAAAAAA-A---TCGAA-CAA--ATGGTGTT-AACT-A--TCTAATAT---TTTGGCATGTATTT-CGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGACATACCA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---AGAG--------C--AAACAAA-TGAC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AG-AAAAT--------GACAGATTTTCACGAATGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGTCTTTGCACGCGTTCAAATCGATATTTTAAAT-----AAACAAAGCAAGA---AGAGTACT----C-CATTTTTAAAATATTCCAGCATTTTGTTTT-ATTCAT----ATAAATAATTCCGAATCGAAAGTCAATCTTAAATCGTGGTATTGAGACCACAATTTAAATTTTTC-CCT---------------------------A----GA--------ATGGCGGCC-----ATATTAATCGTCACTTG----GGACGCT----AAA------GG-------G-GACTA-----TTTTATCGTTGCTATACTAATGCGC------TG------TCTGCATTGCATGT
gi|2 : acttgtattataaATTAAATCG---TGAAATGAATAACAAA----GATTA-TAGAATAAAATTGTAATAT-TA-GCC--GCACGATTCCTTATAGAAGGCATTCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgaaatgaataacaaagattatagaataaaattgtaatattagccgcacgattccttatagaaggcattcg
gi|20 : acttgtattataattatattcatacccataaacagcaatattacacacatgatcatagtttttatgatagttgcaacaaaagtattccatataatatagctacgactataacatcatataaaataaaatatttgaaagacagatgaaatatttattttataataaaaaaacaacctgtggttgatagatagaacaaaagaaacgaacaaacaacatattataacacgggttgcctcccttacttttgaaactaccacatataatgtgtttctgaccaaatcgcgtgaacaccgaaaaaaatcgaacaaatggtgttaactatctaatattttggcatgtatttcgtcattatagataatactttaaatgtggcagacataccagaagttctgatttaaaaaaaaagagcaaacaaatgacattcgtataatagcgtaaacgtcaatagaaaatgacagattttcacgaatgacgaaagagaaaagcacgaacattggtctttgcacgcgttcaaatcgatattttaaataaacaaagcaagaagagtactccatttttaaaatattccagcattttgttttattcatataaataattccgaatcgaaagtcaatcttaaatcgtggtattgagaccacaatttaaatttttccctagaatggcggccatattaatcgtcacttgggacgctaaaggggactattttatcgttgctatactaatgcgctgtctgcattgcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGTCAAAATATATTTATAGTTGCTCATAATGAACGCT----AA----------------G-GACTACTACTTTTTAGCATTGCTAAACTAATGTGC------AG------T
gi|20 : ATGAAATTACCGTCAACAGAATAACAAA----GATTA-GAGAACAAAATCGTACT-T-TGGGAC--TCATGA-TCACAATAGAAGGCATTCGagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaatgaaattaccgtcaacagaataacaaagattagagaacaaaatcgtactttgggactcatgatcacaatagaaggcattcgctgtgttccgcttccaaaa
gi|21 : gtcaaaatatatttatagttgctcataatgaacgctaaggactactactttttagcattgctaaactaatgtgcagtagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaa-AAAA-A--TCTAATATATATTT-TTTTTTTTTT------TTAT-----AGA---TAGTACTTTAAATGTGGCAGGCATACCAG-GAAGTTTT-GATTT-T----------A----TA--------G----------C----------A-------CATGTATAA--------A--ACAACAA-C-AC------AT-----------TATT-ATAGCG--TAAACG--TCA-AT--AATGAAAT--------GACTGATTTTCACAAACGctgtgttccgcttccaaaa
gi|23 : ttgatgtatattaactaaaatgcaataagattattatctaaaaatgtgtatttattgatatttaaaagttattttgcattttaaaatatttgttactgaa-T-AC------ATT--------TATATT-A-AGCGATTTACCGAATCG-AT--TA-AAAATATCATCTGGACTGATTTTCATGAACGACGAA--A-G-AG-GTAAGC----TCA-AACATTGTCCTTTGCGCGAGTAAAAATCGATATATTGAA------AAAAAAAGCAAGT---A---TACT----A-CA-TTTTAAAGTAGTTAAAT-TATTCTTTG-GTTAAT----ATGAATAtttnnnnnnnnnnatacaacatcagtgatcttgctcctgaaatacacaattaacatgagtaa
gi|24 : gatgttttgtattgtgacatgtgatgttgccgtcaatgtaatcatgtagaaggtcattatgcatatgaatattaaaattacagctTGTTAT---AGTTGCAACAAAAG---------------------GCTACGAACAT------CAT----ATAAAACAAAACATT-TGAAAGTGAG----ATGTAc
gi|24 : aaacacaAACA--TCATAT--AA-AACAA--------AAC--ATTT----GAAAG-TGAG--ATGTAG-GAAAGC----ACA-AACATTGGCCTTTGCGCGAGTTCAAAACAATAGTTTGA-T-----CAACATAGAAAGT---A---TACTTACTA-CCTTTTTAAAGTAATCCAGC-TTTTCTTTT-ATTAAT----ATAAA----TCC---------------CT-AAATCGTTGTATTGGGACCACAATTTTAATTTTTC-CCTAC-ATT---T----T----AT---A--AAAACAA--------ATGGCGGCAAAggaaagcacaaacattggcctttgcgcgagttcaaaacaatagtttgatcaacatagaaagtatacttactacctttttaaagtaatccagcttttcttttattaatataaatccctaaatcgttgtattgggaccacaattttaatttttccctacattttataaaaacaaatggcggcaaaca
gi|25 : aaacacatgttatagttgcaacaaaaggctacgAAATCGTGGTCAACAAAATAAAAAAAAAAGATT----GAACAAATT--TAATATACAGGCA--ACATGA-TCCCTATAGAAGGC-TTCGca
gi|26 : tcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAATCGCCGCCCACAGTATAACAAA-----ATTAATAGAACAAAACCATAA-----ATGCCCATCATGA-TCACTATAAA
gi|28 : gtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnA-A--------C---ATAGTATAAC-ACAGTTTGCCTC-CC--T--CC-A--CTTTC-AGATG-A-C-CCCC--A-----------TATAAT-GTGTTTCTGA---CTACAAA--------AA--------------CACTGCAAAAA-AA--TCAAAACAA--GTGGTGTTGAAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTATTATATAAA---TAAAACTTTAAATGTGGCAGGCATTCTA--GAAGTTCT-GA-TT-T----------
gi|3 : TAGTATAAC-ACGTGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCTCAA-----------TGTAAT-GTGTTTCTGA---CTTCAA---CAC-------------------CACCGCAAAAA-A-----AAA-CGA--GTTGTGTT-AAAA-AA-TCTAATAT---TTT-GAAT-TTTTT-TGTCATTGT-----AGA---AAATATTTGAAATATGGCGGG-ATGCTA--GAAGTTCT-GA-TT-T----------T----AT--------A----------G----------C-------AC---AT-G--------T--ATAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-ATAAAA-AAAAT--------GACTGATCTTTA-GAATGACGAA--A-A-GG-AAA--C----AAGAAACATTAACCTTTGCGTGtacagcacatgtataaaaag
gi|3 : GATCTTTAGAATGACGAAAAGGAAACAAGA---AA--CATT----AACCTTTGC---GTGTTTCACC-CTTTCTTTA-ATTAAT----ATAAATAATTCCGAATTGAACGTCAATCTGAAATCGTTGTATTGAGACCACAGTTTCAATTTGTC-CCTAC-ATT---T----TACCAA----A--A----AA--------ATTGTGGCCCAAATATATTGATCGTCGCCTG----GGCCGCT----GAA------Gtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|3 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactGAAATCGCCGCCAACAGTATAACACA----GATTA-TAGAACAAGGTCATAAAA---GTGCC--TCACGA-TCGCTGTAGAAGGTATttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|30 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaTAGTATAAC-ATGTGTTGCCTC-CC--T--TCCA--CTTTTGAGATG-ACC-CCC---A-----------T-TAAA-ATGTTTC-GA---C--------------AC--------------CACCACAACAA-A---TCAAA-CAA--GTGGTGTT-AAAAGA--TCTAATAT---TTT-GTATGTTTTT-CGTCATTAT-----AGA---TAATACTTTAAAATTGGCAGGTATACTA--GAAGTTCT-GA-TT-cgctacgataacactacgctagcctttcaataaa
gi|31 : -CACAT-TCATAAAT-----G--------ATCAAACACATGACCA------TAGTTgtatagcacatgtataaaaaac
gi|32 : agttctaaagacagataaaagaaatttagttatgataatgaaaatatctctttgattcaattatatagatattttctaattttgagttgatgacgacataactgttttgatttatttttttattgtatgcctttttaataaaataaaccaaAA-A--TCTAATAT---TTT-GTATGTTTT--CGTCGTTAT-----AGAAGGTAATACGTTAAATGTTGAAGGTATATAA--CAAGTTCT-GA-TTGT----------ATGGCAC--------A----------AGTATG-----A-------AA---ATAA--------A--AGAAAAC-A-AC------ATA--------TGTATA-ATAGCT--TAAACG--ATA-AT--CA-AAAGT--------GAC-AATTT
gi|34 : T--------CGTATA-ATTGCG--TAAACG--TCA-AT--TA-ATAATT-------GACATATTTTCATGAATTACGAA--A-G-AG-AAATGC----ACA-GA-GTTGACCTTTGTGTGAGTTCATCTCATTATTTTGAAG-----AAACAAAGCAAGT---A---TACT----A-CCTTTTc
gi|35 : ATGAAATCACTGTCAGCAGTATTACACA----GGTTA-TATAACAAATT-GTACT-T-TGTGTC--CCACCA-TCACTATAGAAGGTATTC
gi|37 : ttgaaacgtttggaactattttatcaggcggtggaaCAAAATGTATTTATCGTCACT-------GAAG------GAG------GGA------G-GACTA----TTTTTACCGATACTATACTTAAGCGC------GGTAGTCATTTGAATTTCATGTac
gi|38 : -AAAA-A--TCGAATAT---TTT-GTATGGTTTT-C-TCGTTAT-----AGAAGATAATACTTTGAATGTGGCAGGTACACcattttagtggaagctg
gi|39 : gcagactgagagatcaacgttttctgAATCACAGTCAACAGTACAACAAA----GGACA-TAGAACAAACTC--AA-AC-C---TC--TCACAA-CGACTATAGAAGG-ACTCGctatt
gi|4 : TAATAAACAAAAAGAAAT----AAACCTAGAAAGAAAGA-A--------C---ATAGTATAAC-ACGG-TTGGCTCACT--T--T--A--CATTTGAGATG-A-C-CCC---ACCATTATGGCATATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAAG-------------CA--GCAAAAA-AAAATC-AA-CAA--AAGGTGTTTAAAA-A--GCTGAAAT---TTT-ATATGTTTTT-CGTCGTTAC-----AGA---TAATACTTTAAATGTGGCAGACATACTA--GAAGTTCA-AA-TT-T----------T----AA--------AGTAAATGTATA----------A-------AA---AAAG-----------ACAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAATT--TCA-AT--AA-AAAAT--------GACATATTTTCACGAATGGCGAA--A-G-AGAAAAAGC----AT--AGCGTTTACCTTTGTGCAAGTTCAAATCGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAACTATTCCAGC-CTTTCTTTT-ATTAATATTCATGAATAATTCCTAATTGAATGTCAATCTGAAATTTTGTTATTGAGCCCACTATTT-AATTTTTC-CCTAC-ATTTTAT----C----A----A--AAC--AA--------ATGACGGCC-----ATATTAATCGTCGTTTG----GGACACT----TCA------GG-------A-AAATA----TTT------------TACAAATGCGC------AG------TTttatggtttgccttccaa
gi|40 : atttaaattaCCT-----GCGGTTGATGGATAGAAAGCAAG----AA-C-----AACAAAC-------------------TATAAC-ACGAGTTGCCTC-AC--TTAT--A--CTTTTGAGACG-ACC-CCC---A-----------TATaaagggtgggaacctacgtgcatgtgacataggttctccctcttgcagtagtcatttgc
gi|5 : AATGTAGTTACGACCATTAAACACAT----ATAAAACAAA-TACTGTGAAAGACAG----ATG-ATT--TTATTTA--AAAATCAACCAAACAACCT-----TTGGTTGATAGATAAAAAGAAAG----AAAC----GAACAAACA-C--------C---ATAGTATAAC-ACTGATTGCTTT-AT--T--T--ATACTTTTGAGACGTG-T-CCC---A-----------TATAAT-GCATTTCTAA---C--CAAAATCGTACGAA--------------CACCGCAAAAA-AAACGCGAG-CAA--GTGGTGTT-AAAA-AG-TCTAGTAT---TTT-GAATGTATTT-CGTTGTTAT-----AGA---TAATGCTTTAAATATGGCAGACATACTAAAGAAGTTTT-GA-TT-T----------T----AA--------A----------A----------C-------AC---ATAT--------A--CAAAA---T-GC------ATT---------ATATACAT-TCG--TTAACG--TCA-AA--AG-TAAAT--------GACCGATTTTCACAAATAGCGAA--A-G-AG-AAAAGC----ACA-AACATTGACCGTTACG---GTTCAAGTCGATACTTTGAAT-----AAACATAGCACGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCGTTT-ATTTAT----ATGTATAATTCCGAATCGAACGTCAATCTGAAATCGTAGTACTGGGACCACAAATTCAATTTT-C-ACTAC-ATT---T----T----ATAACA--A----CA--------ATGGCGGCCATATTAT---TA--GTCGCTTA----GGCCGCC----GAA------GG-------GAGAGGG----GT---ACCGTTGCTAT
gi|6 : AAAAA-C---TCGAA-CAAAAGTGATGTT-AAAA-AA-TCTAATAA---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGCGACAGGCATACAA--GAAGTTCT-GA-TT-T----------T----AC--------A----------GCACATGTATGA-------AA---AAAG--------A--CTAAAAA-C-TC------ATT--------CGTATA-AAAGCG--TAAACG--TCA-AT---A-AAAAT--------GACTTATTTTTATAAAAGACGAAC-A-C-GG-AAAATA----ATA-AACATTTGTCTTTGCGCGAGTTCACATTGACATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-TCTTTTTAAAGTTTTCCAGC-CTTTC-TTT-ATCAAT----ATAAATAATTCCGAAACGAACGTCAATTTAAAACCGTGGTATTGAAACCACAA-CTCAATTTTTTACCTGCAATT---T----CCAA-A----A--A----AA--------ATGGCTGCCAAAATATATTTATCGTCACTTG----GGACACTGAAAGAA------GG-------G-GACTA----TTTCTACCGTTGCTATATTTATGAGCAGTAGTCG------TTTGAATTTCATGTcataa
gi|7 : -CCATGAAA-----GACACAT--A--AAACACATGATCA------T------TATAATAGTTGCAACAAAAGTATTCCAT-----ATAATGTAACTACGAGCAT-AATT-TAT----AAATAACAAA--ATT-TGAAAGACAG----GTGCAAT--TTATTTT--ATAATAACCCAAACAAaatttttgtgtaaactgtatgatttgactaccacatacttgaagtttttgactctctgttagatagaacaaaaatcgcaatacaaatttggatttctacgtcttctgctattgcaatagagctaaact
gi|7 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaC----AAACAAACG-A--------C---AATGTATAAC-ACGGATTACCAC-TC--T--TCTA--CTTTTGAGACG-A-CTCCC---A-----------TATAAC-TTGTTTCAGA---C--CAA---TGCGTGAAATTGCATATTTCACCACCACAAAAC-A---TCAAA-CAA--ACATTGTT-AAAA-AAATTCAATAA---TTT--TATGTTTTTTCGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GGAGTTC---A-TA-T----------A----GC--------A----------C----------ATGTATATAA---AACG--------A--AAAAAAA-T-AC------ATT--------CGTATT-AAAGCA--CAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-GTAAGCGATAACG-AAacgacaatgtataacacggattaccactcttctacttttgagacgactcccatataacttgtttcagaccaatgcgtgaaattgcatatttcaccaccacaaaacatcaaacaaacattgttaaaaaaattcaataattttatgttttttcgtcattatagataatactttaaatgtggcaggcatactaggagttcatatagcacatgtatataaaacgaaaaaaaatacattcgtattaaagcacaaacgtcaataaaaaatgactgattttcacgaacgacgaaagaggtaagcgataacgaa
gi|8 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaccatgaaagacacataaaacacatgatcattataatagttgcaacaaaagtattccatataatgtaactacgagcataatttataaataacaaaatttgaaagacaggtgcaatttattttataataaccTGGTTGCCAACTAGATAGAAAG----AAAT----AAACAAACATA--------C----TAGTATAAC-ACTGATTGCCTC-TC--TC-C--A--CTT
gi|8 : t--------------CACCGCAAAAGCA---TCGAA-CAA--GTAGTGTT-AAAA-A--ACTAAAAT---TTT-GTATGTTTTT-CGTCATTGT-----AGA---TACTACTTTAAATGTGGCAGGCATACTT--GAAGTTCT-GA-TTGT----------ATAGCAC--------A----------AGTGTG-----G-------AA---AAAG--------A--AAAAAAATT-AC------CTC--------CGTTTA-AAAGCG--TAAAAG--TCA-AT--AA-TAAAT--------TACTTATTTTCACAAAATACGAATCC-G-TA-AAATAA----ACG-AACATTTGTCTTTGCTCGAGTTCAAATCGATATTTT-AAT-----AAACAAAGCAAAC---A---TGCT----A-CCCTTTTATAGTATTTTAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGATACTCTGAAACCGTGGTATTTAGACCATAATTTCGATTACTG-TCTGC-ATT---TTA--C----A----A--A----AAAAAAT---ATGGCTGCCAAAATATATTTATCGTCACTTT----GAACGCT----GAATGAGTGGG-------G-AACTA----TTTTTACCGTTGCTATATTAATGCGCAGTAGTTG------TTTGATTTTAATGTcaccgcaaaagcatcgaacaagtagtgttaaaaaactaaaattttgtatgtttttcgtcattgtagatactactttaaatgtggcaggcatacttgaagttctgattgtatagcacaagtgtggaaaaagaaaaaaaattacctccgtttaaaagcgtaaaagtcaataataaattacttattttcacaaaatacgaatccgtaaaataaacgaacatttgtctttgctcgagttcaaatcgatattttaataaacaaagcaaacatgctacccttttatagtattttagcctttcttttattaatatgaataattccgaatcgaacgatactctgaaaccgtggtatttagaccataatttcgattactgtctgcattttacaaaaaaaaatatggctgccaaaatatatttatcgtcactttgaacgctgaatgagtggggaactatttttaccgttgctatattaatgcgcagtagttgtttgattttaatgt
gi|9 : ttggttgccaactagatagaaagaaataaacaaacatactagtataacactgattgcctctctccactt---ACAGTATAAC-ATGGGTTGGCTC-CCTTT--T--A--CTTTTGAGATG-
gi|9 : T---TTT-GTATGTTTTT-CGTCGTTAA-----AGA---TAATACTTCAAATGTGGCAAGCATACTA--GAAGTTCT-AA-TT-T----------T----AA--------AGTAAATGTATA----------A-------AA---AAAG--------A--AAAAAAA-C-AC------ATT--------TGTATA-ATAACG--TAAATG--TCA-AT--AA-AAAAT--------GAC--ATTTTC-------GCGAA--A-G-AG-AAAAGC----AC--AACGGTGACCTTTGCTCGAGTTAAAATTGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTA-ATTAAT----ATAAATACTTCTGAATGGAATGTTAATCTGAAATTGTGGTATTGAGCCCACAATTTCAATTTTAC-CCTGC-ATT---TTAC-C----A----A--AAC--AA--------ATGGCAGCC-----ATATTAATCATCGTTTG----GGATGCT----TCA------GG-------G-AACTA-----TTTTACTTATG-TGCAGTAGTGCGC------ttttgagacttttgtatgtttttcgtcgttaaagataatacttcaaatgtggcaagcatactagaagttctaattttaaagtaaatgtataaaaaaagaaaaaaaacacatttgtataataacgtaaatgtcaataaaaaatgacattttcgcgaaagagaaaagcacaacggtgacctttgctcgagttaaaattgatattttgaataaataaagcaagtatactacctttttaaagtattccagcctttctttaattaatataaatacttctgaatggaatgttaatctgaaattgtggtattgagcccacaatttcaattttaccctgcattttaccaaaacaaatggcagccatattaatcatcgtttgggatgcttcagggaactattttacttatgtgcagtagtgcgcgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
blockSeqs : T A CACATTGACAATCC CAGACT TT T GACAA C T A ACTC G AGCT A AT AA GGAGA AATC CTAGA T . ATG . A TT TGT TA TC T ACCATTATGGCA . T CTA TGCGTGAAATTGCATATTTCAC C AAA G A AA G G AA ATA G T TATAT AGG AA C T G TAAAGTAAATGTATAA TGT A AAG TG TTTATA ATATAAAA C T AT AA T AAA T ATCATCTG TA C TC C T A G GATA GA T GACGA TCA GAG TACT A A T T ATTC A A A C A G A TCACAAAAAAAGAAAT A TAAT GAAA AGATGGGCT A CTACT T AGTAGTTG C A AAAA A A CG TATACAG CAT . C
blockSeqs : . . AGACACAT . GT A . C A . . . . A . . . . G . . . . . TT TCT . AC . TCAA . T CTT ATCGCGTGAAG . AAC A . . T . A . . . . AGA G . . G TACAGCACATGTATGA . A G TT . . . T . . . A . T TG C C T . . A . G C . . A . . . T . . T T T C . G . TTACAAAAAAAAAT A . . TGAGTGGG . T T GGTAGTCA G A . . T CA TTTGG T . C
blockSeqs : . . CAGCAAT . GT A . G A . . . . C . . . . G . . . . . . TCT . AC . CA . T C AATCGTACGAA . A A . . . . G . . . . . . . . . TAAAGTAAATGTATAA . C A T . . . A . . . C . . TG C C . . . A . A C . . . . . . T . . G A T C . A . TTATAAAAACAA A . . AGC . C T AGTAGTCG C T . . A CA TTTGT A . T
blockSeqs : . . TGGACT . GT A . A A . . . . C . . . . G . . . . . . TCC . TG . A . T C ATCGCGTGAA . . A . . . . A . . . . . . . . . ATGGCACAAGTATGA . G C T . . . T . . . C . . TT T . . . . T . A C . . . . . . A . . A A T A . G . TTATCAAAACAA A . . GGA . T T AGTAGTTG C T . . G G AAGT T . T
blockSeqs : . . TGGCCT . GA A . G G . . . . C . . . . A . . . . . . TAT . A . A . T C AAA . . G . . . . . . . . . . . . . . ATAGCACAAGTGTGG . T A T . . . T . . . A . . AG T . . . . A . G C . . . . . . T . . A A T T . A . TTACCAAAACAA A . . GG . T T TG T T . . T C ACC C . .
blockSeqs : . TG . AA A . A A . . . . A . . . . A . . . . . . TCT . A . A . A C CAC . . G . . . . . . . . . . . . . . ATAGCATATGTATA . T T C . . . T . . . A . . TG C . . . . A . A C . . . . . . T . . G A T C . A . TTACAAAAAAA A . . GG . T C AG A T . . C . AT T .
blockSeqs : . . A . C A . . . . A . . . . G . . . . . . CC . A . A . . C AC . . A . . . . . . . . . . . . . . AGCACATGTATAT . T A T . . . T . . . A . . TG C . . . . A . A T . . . . . . T . . A A T C . A . TTAACCAAAAA C . . GG . G T AG
blockSeqs : . . A T . . . . T . . . . G . . . . . . CC . A . A . . G . . . . . . . . . . . . . . ATAAAA . A A C . . . T . . . T . . TG A . . . . A . A T . . . . . . T . . A A A C . A . TTACCAAAAAA A . . GG . T T
blockSeqs : . C . . . . . C . . . . A . . . . . . T . A . A . . . . . . . . . . . . . . . . . AAAAAA . T A A . . . T . . . A . . AT T . . . . A . A C . . . . . . T . . G A T C . G . TTATAACAACA A . . GG . T .
blockSeqs : G . . . . . . . A . . . . . . T . A . . . . . . . . . . . . . AAAAAA . A A C . . . T . . . C . . AT T . . . . A . A C . . . . . . T . . G C T C . G . TCCAAAAAAA A . . G . . .
blockSeqs : . . . . . . . . T . A . . . . . . . . . . . . . ATAGCA . A A T . . . A . . . T . . CG T . . . . T . G C . . . . . . T . . A . . . . G . CCAAGGAAA A . . . . . .
blockSeqs : . . . . . . . T . . . . . . . . . . . . . TATAGC . A A C . . . A . . . A . . TT T . . . . A . G C . . . . . . . . . G . . . . . . AGA . . .
blockSeqs : . . . . T . . . . . . . . . . . . TAAAAC . A . T . . . A . . . A . . TG A . . . . A . . . . . . . . . . . . A .
blockSeqs : . . . . . . . . C . . . T . . . A . . TT C . . . . . . . . . . . . . .
blockSeqs : . . . . . . . A . . A A . . . . . . .
blockSeqs : . . . A . . . .
blockSeqs : . . . . . .
blockSeqCons : CGGCACAT******* ** ******** A************** C***** ATCGCGCGAA*************** A********** **** TTACAAAAAAA************************* GG************* AGTAGTCG******
originalCons : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAAC-----GGCA-AT--ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAG--------A--AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATT---T----C----A----A--A----AA--------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC------NG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
finalCons : NNNNNNNNNNNNNTTATAT-CACAT-CCATGAACGGCACAT-------ATCAAACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCCA--------------TATAAT-GCGTTTCTGAC-----CAAATCGCGCGAA---------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAGA----------AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCACAATTTCAATTTTTC-CCTGC-ATTTTACAAAAAAA-------------------------ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAAGG-------------G-GACTA----TTTTTACCGTTGCTATACTAATGCGCAGTAGTCG------TTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): TCGGCCTCGTTATTGATTTAAAACTGTTTACAACTAAAATTCTGTAACACTTTCAGATATTTTGGATCGTTTTTGTTTTTATTTAGGTCTATTTTTTCATCATCTTAAAAATCAATTGTATGCATTGTCAAAATGAAGAACAAATGATTTTTTTTTCAATTACAGTTAATGAAAATTGTTAATTTCACTTACTGATTCAATGTTAACACCATAAACCAGTCATAATTGTCGGTTACAGATTGTTTTTAGTGAATGATTATAAAAAACACACAAAAAAAACCACAAAAAAACCCCA
Unaligned ( gi|27 ): ATTTCATGCCTTCTTGGAATATTAATATAGATTTCTCAGTCAATCGTTTTCCACTGTACTATTATTTAAAATAGTAAAATTATAAATGTTAATTTCACAAAGTTCACAGAAAATAATTATGTTCTCAAATATATTAATATCCATATTATCATATACTCCTGAATAAACCCACTTGGGGGTTGGGGTGGAGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGG
Unaligned ( gi|29 ): TTACCAATGAGCTCATGAATACAGATCGAAAGACAGATAGAAAGAAATTTTGTTATAATGATTTTTTTTAAATGATGATCTATGGATATTCTAATTTTAAGTTGGTGATGACATAATTGTATACATTTTTCTTTTTTATTGTATGTCTGTTTGATATCATAAACCAACGCATAGAAGACCCATCCAACACATTGTA
Unaligned ( gi|33 ): TGATGTATATTAACTAAAATTAGAGTATATTTATAAATGTATTTTTATAGATATTTAAAAGTTATTTCACATTTTAAATTATTTGTTAATGAAAAAAAGATGTCCTTGACTATTGCACGATGCTCAGGTTATGGTG
Unaligned ( gi|36 ): ATGGTTATCTCTCTCATCATATACAGTAAGATACATGTGCTGTATCCCAGAATAAACGCCCCTGCTGGTAATGCAGGGGGTGTGTGTGTGTGTGGGGGGGGGGGCGGG
Unaligned ( gi|41 ): AAATGTATCTTTAAATTTACCAATATAAATAACATACATTTATAAACTAAAAGGCCCTAAAACGTACAACAAAA
Unaligned ( gi|42 ): ATATATAGCTGCGCGCGTGACGTAGGTTCTCCCCCTTGAGTATACTGCACTTCG
Unaligned ( gi|43 ): GAATTTACCAATGAGCTATTGAATACAGATCTCAAGACACATAAAA
Alignments
lowQualScore : 33333333 111111 11111 11 11111 11111111 22222 222222222222222 111111 6666666666666666666666666 111 11 8888888888888888888888888888888888888888888888888888888 11111111 11111111 1111 11111 222222222222222 11111111 1111 11 4444444
lowQualScore : 8 0 44444444 777 4 222222 2 55 1 00000 1 1 3 7777 3 7777 5 11 55 00000 7777 99999 3 11111111 555 2 2 77 66666 33 777 3 555555555555555 5 3 444444 5555555555555555555555555 4 888 1 4 55 9 2 22 444 2 2 66666 999 66 2 2 5 0000000000000000000000000000000000000000000000000000000 555 1 00000000 33 6666 777777 99999999 2 2 33 33 2 33 2 00000000 55 4 88 5 2 2 1 0 0000 88 0 1 66666 444 777 5555 2 2 44 6666 1 2 0 0 0 3 2 555 2 33 6 33333 0 6666 6666 000000000000000 3 7777 33 1 0 22222222 4 1 3 1 2222 5 1 11 2222222 888 5 3
lowQualScore : . . ........ ... . ...... . .. . ..... . . . .... . .... . .. .. ..... .... ..... . ........ ... . . .. ..... .. ... . ............... . . ...... ......................... . ... . . .. . . .. ... . . ..... ... .. . . . ....................................................... ... . ........ .. .... ...... ........ . . .. .. . .. . ........ .. . .. . . . . . .... .. . . ..... ... ... .... . . .. .... . . . . . . . ... . .. . ..... . .... .... ............... . .... .. . . ........ . . . . .... . . .. ....... ... . .
lowQualScore : 0 7 99999999 888 4 888888 4 00 0 00000 0 5 6 7777 6 7777 1 00 55 00000 1111 77777 1 22222222 000 5 9 99 44444 99 111 3 000000000000000 0 4 555555 3333333333333333333333333 0 000 4 0 55 2 9 55 777 7 7 77777 333 88 9 7 3 0000000000000000000000000000000000000000000000000000000 000 0 44444444 99 2222 777777 11111111 5 1 22 11 2 11 2 33333333 88 5 44 0 5 5 2 3 6666 33 3 5 77777 777 333 7777 7 9 66 1111 6 3 8 7 2 1 6 333 6 22 2 11111 8 5555 5555 555555555555555 3 1111 99 4 8 99999999 4 7 0 0 1111 7 0 99 7777777 111 7 7
consensus : NNNNNNNNNNNNNTTATAT-CACATTCATGAAC-GGCACATATC---AA-ACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGCGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAG--------A--AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCAC-AATTTCAATTTTTC-CCTGCATTTTA-CAAAAA-AA-----ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC----A---GTAGT-CGTTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
Reference ( family-2882 ) : NNNNNNNNNNNNNTTATAT-CACATCCATGAAC-GGCACATATC---AA-ACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGANCATAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTATTTT--ATAATAAACCAAACAACCT-----GTGGTTGATAGATAGAAAGAAAG----AAAC----GAACAAACA-A--------C---ATAGTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAGACG-A-C-CCC---A-----------TATAAT-GCGTTTCTGA---C--CAAA-TCGCGCGAA--------------CACCGCAAAAA-A---TCGAA-CAA--GTGGTGTT-AAAA-A--TCTAATAT---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---ANAG--------A--AAAAAAA-T-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGCCTTTGCGCGAGTTCAAATCGATATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGTCAATCTGAAATCGTGGTATTGAGACCAC-AATTTCAATTTTTC-CCTGCATTTTA-CAAAAA-AA-----ATGGCGGCCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA------GG-------G-GACTA----TTTTTACCGTTGCTATACTAATGCGC----A---GTAGT-CGTTTGAATTTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAATCGCCGTCAACAGNATAACAAA----GATTA-TAGAACAAANTCGTAATAT-CGTGCC--TCACGA-TCACTATAGAAGGCATTCG
gi|1 : CATAAACCAGCACAT-TCGTGAATACACTTGATCA------TAGTTG------------CAACAAAGGTTTTCCAT-----ATAATGTAGCTACGAGCAAAACAT-TAT----ATGAAACAAAATATT-TGAAAGACAG----ATGCAATGATTTTTTT--TTA-TGAACTAAATAACCT-----GTGGTTGATAGATAGTAAGAAAG----AAAC----AAACAAACA-AGTTGGGAAC---ATAAT-TAACCACAAGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCCCAA-----------TATAATCGCGT----GAACTT--CAAC-TTTCAC-----------------CAACGCAAAAA-T---TCGAA-TAA--GTGGTGTTTAAAA-A--TCTAACAT---TTT-GTGTATTTCT---TCATTAT-----AGA---TTATACTTTTAATGTAGCAGGTATACTA--AAAGTTCT-GA-TT-TTATAGCATGTA----AG--------A----------A----------A-------AA---ACAGTATAAAAAA--AGAAAAA-A-AC------ATT--------CG---------CG--TAAACG--TCA-AT--AA-AATAT--------GACTGATTTTCACGAAAGACGAA--G-G------AAGCGACAACA-AAGATGAGTCTTTGCGAGAGTTCAAGTCAATATTTTAAAT-----AATCAAAGAAAGT---A---TACT----A-CCTTTTCAAAGTATTGTAG--------GTT-ATTAA------------------AATCAGACGTCAATCTGAAATCGT----------------------ACTTTT--------TTTTA--AAAAA-AA-----ATGGCGGTCAAAATATATTTATCGTCGCTTG----GGACGCT----GAA-------G-------G-GACTA----TTTTTATCGTTGCAATTCTAATG
gi|10 : tgtaacattttcagatagtttcgattcattattgttttatttaggtctatattccaatcattttaaaaatcaattgtatacattttcaaaatgaagaacaaatgattttttttcattacagttaatgaaaattattaattgcacttactaattcaatgttaacaccatgaaccatgaatatttgttggctacataattgttttattgactgttatagaaaaaacagatctaaagacatttataatttttagttggtgatgacataactgtatacagttttgattctttttttattgtatgccattttggtatTT-AAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTAT-----AGA---TAATACTTTAAATGTGGCAAGCCTACTA--GAAGTTCTCAA-TT-T----------A----TAGCATATGTA----------T----------A-------AT---AAAG--------G--AAAAAA--T-AC------ATT--------CGTACG-ATAGCG--TAAATG--TCA-AT--AA-AAA-T--------GACTAATTT-CACGAAC--------------------------CG-CACATTGCCCTTTGCGTGAGTCCAAATTGATATTTTAAAT-----AAACAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTACTCCAGG-CTTTCTTGT-ATTAAT----ATAAATAATTCCAAATTGATCATCAATCCAAAATCATAGTATTGAGACCAC-AAATTCAATTTTCT-CCTGCATTTTA-CAAAAA-AA-----ATGGTAGCCAAAATATATTTATTTTTGCTTC----GGACACT----GAA-------G-------G-GATTA----TTT------TTGCTATACTAATGCACTTTTAACTGTAGT-CATCCACAATTCATGT
gi|11 : TC---AA-TTGCATGACAA------TAGTTGCTATGTTAGTTGCAACAGATGTCTTCCAT-----ATAATGTAGTTACGACCATTAAAT-AAT----ATAAAACTAAATATT-TGAAAGACAG----ATGAAAT--TCCTTTT--ATAATAAACCAAA------------TGAT--ATAGATAGAAAGAAAA----AATT----GAACAAACA-A--------CATGATAGTATAAC-ATGGGTTGCCTC-ACTTT--T--A--CTCTTAAGACATC-C-CCC---A-----------TATcattt
gi|12 : accaatgagctcatggatacagatcgaaagacaaatagaaaatcattttggtataataatgaaactattttttaattcaaatagatgatgatctatggataatttttagtttgtgatgacataattgtatacagttttgtttctttgtttttttattgtatgcctttatgatataaaaaaaaccaacacattgataacccg-CACATTTATGACC-A------ATC---AA-ACCCACGATCA------TTGATGCTATTTTAGTTGCAACAGAAGTCCTCCAT-----ATATAGTAGTAACGACCACAAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--CTATTTT--ATAATAAACAGAACAACTT-----GTGGTTAATAGAT----AGAAAG----AAAC----GAACAAACA-A--------C---GTAGTATAAC-AAGGGTTGCTTC-AC--TTGT--A--CGTTTGAGACG-A-C-CCC---
gi|13 : actaatgaactcataatacagatcgaaaggtagatacaaaaaatggttacaataatgaaattattttttaattcaaatagatgatgatctatgaatactttttagttggtgatgacataattgtatacagttttttttttttttttttttttttcattttttattttattaaccaaA-TT-T----------A----TA--------A----------A----------A-------AA---AAAG--------AAGAAAAAAA-T-ACTTTATAATTATATAAAACGTAAA-ATTACG--TAAACG--TGA-AT--CG-AAAAT--------GACTGATTTCCACAAACGACGAA--ACG-GG-TGAACC----ACA-ATCAGTGGCCTTTGCGCGGTTTCAAA-CGATATTTTGAAT-----GAACAAAGCAAGT---G---TATT----A-CTTAATTAAAG-ATTCCAGC-A-TTCTTTT-ATTGAT----TTTAATATTGCCGAATGAAACGTCAATCTGAAATCGTGGTATTGAACCCAT-AATTTCATGTTTCC-CCTGCGTTTTA-ACCAAA-AA-----ATGGCGACCAAAATAGATTTATCAAAGCTTG----AGACGCT----GAA------AGC------G-GACTA----CTTTCACCGTTTCTATcacat
gi|14 : tttatagcacATC---AA-ATACATGATCACAGACTTAGTTGTTATGTTAGTTGCAACAAA-GTCTTCCAC-----ATAATGTAGCTATGAGTATAAAAT-CAT----ATCAAACAAAATATT-TGAAAGACAGAGCTATGCAAT--TTATTTT--ATAATAAACCAAACAAC--------------ATA---AAAAACAAAG----AAAC----GAATAAACA-A--------C---ATAGTATAAT-ACAGgtagggttgcgtactaaaatgatcgtgtgggtcctggctg
gi|15 : gagctcatgaataaatacagatccaaagactggaagatattttgttacaataatgaaaatatttttataattcaaatagatctaaatgatgatctatggatattttccagttttagctggttatgtcataattgtatacagttgtttctttttttattgtatgccttttttatatcataaaccaacacattgacaatcc-CACATTCATGAAT-GG-AC-TATC---AA-ACACATGATCA------TAGTGGTTATGTTAGTTGCAACAAAAGTCTTCAAT-----ATAAT-----TA---ACATAGAAA-CAT----ATAAAACAAAATATT-TGAAAAACAG----GTGCAAT--TTATTTT--ATAATAAACCGTACATCCT-----GTGTCTGATAGATAGAAAGAAAGAATCAAAC----AAACAATCA-A--------C---ATAGTAAAAC-ATTGGTTGCCTC-CC--TTCT--A--CATTTGAGATG-A-C-CCC---
gi|16 : tctacaggaagattgaaagaaattttgttataataatgaaaatacttttttaattctaaatgtaaatattttagttggtgatgacataactgtatttagttttgattatttttttaaatgcacgcctttttgatatcataaaccaaGTCTTCAATGACAAATAATGTAGCTACGCGCATGAAAT-CAT----ATAAAACAAAATATT-TGAAAGACAG----ATGCAAT--TTTTTAA--ATAATAATTCAAACATCCT-----GTGGTTGATAGATAGAAAAAATG----AAA------AAAAAACA-A--------C---ATAATATAAC-ATGGGTTG
gi|17 : taggtctatttttttttatcatcttcaattgtatgcatatttaaactgaagaatagaagatttttttttcaattacagttaacgaaaattattaattgcacttactgattcaatgttaatatcataaaccatccatatttgttggttacagttttgatgctttttcttgttgtatgcctttttgatatcataaaccaacacattcat-CACATTCATGAAT-GGC-C-TATC---AG-ACACATGATCA------TAGTTGTTATGTTAGTTGCAACAAAAGTCTTCCAT-----ATAATGTAGCTACGAACATAAAAT-CCTACTCATAAAACAAAATATT-TGAAAGACAG----ATGAAAT--TTATTTTAAATAATAAACCAAACAACCTGGAGAGTGGTTGATAGACAGAAAGAAAC----AAAC----AAA
gi|18 : tctaaagacaggtaaaagaaattttattataataatggaaaaatattcttttaattcaattataaatggatattttctaattttttagttggtgatgacataactgtatacagtttttattctttttttttattgtatgccttttcaatatcataaaccaa----------A----AA--------A----------A----------A-------AA---CCAG--------A--CAACATA-T-AC------AT------------ATA-AAAGCA--TTAACA--TTA-AT--CG-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-A-----------------------TTT-CA-GAG---AAATCGATATTTCGAAT-----AAACAAAGCAAGTTCAA---CACT----G-CA-----AGAGTATTTTAAT-CTTTTTTTTTATTAAT----ATGAGTA-TTTCTAATCGAATATCAAACTGAAATTGCGGTACTGAGATCACAAAATCCAA-----A-CC----------CAAGGA-AA-----AT-GCGACTACAATATATatag
gi|19 : tatagatgcaattatataaatacacacttagcacacgctaagatcagactttatagcacatataatataaaaaacacacacCG--TAAATG--TAA-A---AA-AAAAT--------GACTTATTTTCATGAATGATGAAC-A-C-AG-AAAAA-----ACA-AACATTGGCCTTTGTGCTTATTCAAGTAAGTATTTTGAAT-----ATACAAAGCAAGT---A---CACT----A-CCTTTTTAAAGTATGCTAAC-CAT-CTTTA-ATTAAT----ATAAATAATTCCGAATTGAATGTCAATCTGAAACCATGGTTTTGAGATCAT-AATTTCAATTTTCC-CCTGCATTTCA-CAAAAA-AAGAAATATGGCTGCCAAAATATATTTATCGTCACTTG----AGATGCT----AAA------AGATGGGCTG-GAATA----TTTTTACAGTTG-----CTGATGTGC----A---GTAGT-TGTTTGAATTTcatttcagcacgg
gi|2 : TTATATTCATACCCATAAAC-AGCA-ATATT---AC-ACACATGATCA------TAGTTTTTATGATAGTTGCAACAAAAGTATTCCAT-----ATAATATAGCTACGACTATAACAT-CAT----ATAAAATAAAATATT-TGAAAGACAG----ATGAAATATTTATTTT--ATAATAAAA-AAACAACCT-----GTGGTTGATAGATAGAACAAAAG----AAAC----GAACAAACA-A--------C---ATATTATAAC-ACGGGTTGCCTC-CC--T--T--A--CTTTTGAAACT-A-C-CAC---A-----------TATAAT-GTGTTTCTGA---C--CAAA-TCGCGTGAA--------------CACCGAAAAAA-A---TCGAA-CAA--ATGGTGTT-AACT-A--TCTAATAT---TTTGGCATGTATTT-CGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGACATACCA--GAAGTTCT-GA-TT-T----------A----AA--------A----------A----------A-------AA---AGAG--------C--AAACAAA-TGAC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-AT--AG-AAAAT--------GACAGATTTTCACGAATGACGAA--A-G-AG-AAAAGC----ACG-AACATTGGTCTTTGCACGCGTTCAAATCGATATTTTAAAT-----AAACAAAGCAAGA---AGAGTACT----C-CATTTTTAAAATATTCCAGCATTTTGTTTT-ATTCAT----ATAAATAATTCCGAATCGAAAGTCAATCTTAAATCGTGGTATTGAGACCAC-AATTTAAATTTTTC-CCT--------------A-GA-----ATGGCGGCC-----ATATTAATCGTCACTTG----GGACGCT----AAA------GG-------G-GACTA-----TTTTATCGTTGCTATACTAATGCGC--------------TGTCTGCATTGCATGT
gi|2 : acttgtattataaATTAAATCG---TGAAATGAATAACAAA----GATTA-TAGAATAAAATTGTAATAT-TA-GCC--GCACGATTCCTTATAGAAGGCATTCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaatcgtgaaatgaataacaaagattatagaataaaattgtaatattagccgcacgattccttatagaaggcattcg
gi|20 : acttgtattataattatattcatacccataaacagcaatattacacacatgatcatagtttttatgatagttgcaacaaaagtattccatataatatagctacgactataacatcatataaaataaaatatttgaaagacagatgaaatatttattttataataaaaaaacaacctgtggttgatagatagaacaaaagaaacgaacaaacaacatattataacacgggttgcctcccttacttttgaaactaccacatataatgtgtttctgaccaaatcgcgtgaacaccgaaaaaaatcgaacaaatggtgttaactatctaatattttggcatgtatttcgtcattatagataatactttaaatgtggcagacataccagaagttctgatttaaaaaaaaagagcaaacaaatgacattcgtataatagcgtaaacgtcaatagaaaatgacagattttcacgaatgacgaaagagaaaagcacgaacattggtctttgcacgcgttcaaatcgatattttaaataaacaaagcaagaagagtactccatttttaaaatattccagcattttgttttattcatataaataattccgaatcgaaagtcaatcttaaatcgtggtattgagaccacaatttaaatttttccctagaatggcggccatattaatcgtcacttgggacgctaaaggggactattttatcgttgctatactaatgcgctgtctgcattgcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGTCAAAATATATTTATAGTTGCTCATAATGAACGCT----AA----------------G-GACTACTACTTTTTAGCATTGCTAAACTAATGTGC----A---GTAGT-TGTCTGCATTCAATGT
gi|20 : ATGAAATTACCGTCAACAGAATAACAAA----GATTA-GAGAACAAAATCGTACT-T-TGGGAC--TCATGA-TCACAATAGAAGGCATTCGcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaaatgaaattaccgtcaacagaataacaaagattagagaacaaaatcgtactttgggactcatgatcacaatagaaggcattcgctgtgttccgcttccaaaa
gi|21 : gtcaaaatatatttatagttgctcataatgaacgctaaggactactactttttagcattgctaaactaatgtgcagtagttgtctgcattcaatgtcatttggtgaaaattgtactacatattttaaatgttttgctccgatagaaaaatcaaatttatatctctaaattctctgctatgacaattgcgttttgaaactatttttattggtcaccggaa-AAAA-A--TCTAATATATATTT-TTTTTTTTTT------TTAT-----AGA---TAGTACTTTAAATGTGGCAGGCATACCAG-GAAGTTTT-GATTT-T----------A----TA--------G----------C----------A-------CATGTATAA--------A--ACAACAA-C-AC------AT-----------TATT-ATAGCG--TAAACG--TCA-AT--AATGAAAT--------GACTGATTTTCACAAACGctgtgttccgcttccaaaa
gi|23 : ttgatgtatattaactaaaatgcaataagattattatctaaaaatgtgtatttattgatatttaaaagttattttgcattttaaaatatttgttactgaa-T-AC------ATT--------TATATT-A-AGCGATTTACCGAATCG-AT--TA-AAAATATCATCTGGACTGATTTTCATGAACGACGAA--A-G-AG-GTAAGC----TCA-AACATTGTCCTTTGCGCGAGTAAAAATCGATATATTGAA------AAAAAAAGCAAGT---A---TACT----A-CA-TTTTAAAGTAGTTAAAT-TATTCTTTG-GTTAAT----ATGAATAtttnnnnnnnnnnatacaacatcagtgatcttgctcctgaaatacacaattaacatgagtaa
gi|24 : gatgttttgtattgtgacatgtgatgttgccgtcaatgtaatcatgtagaaggtcattatgcatatgaatattaaaattacagctTGTTAT---AGTTGCAACAAAAG---------------------GCTACGAACAT------CAT----ATAAAACAAAACATT-TGAAAGTGAG----ATGTAc
gi|24 : aaacacaAACA--TCATAT--AA-AACAA--------AAC--ATTT----GAAAG-TGAG--ATGTAG-GAAAGC----ACA-AACATTGGCCTTTGCGCGAGTTCAAAACAATAGTTTGA-T-----CAACATAGAAAGT---A---TACTTACTA-CCTTTTTAAAGTAATCCAGC-TTTTCTTTT-ATTAAT----ATAAA----TCC---------------CT-AAATCGTTGTATTGGGACCAC-AATTTTAATTTTTC-CCTACATTTTA-TAAAAACAA-----ATGGCGGCAAAggaaagcacaaacattggcctttgcgcgagttcaaaacaatagtttgatcaacatagaaagtatacttactacctttttaaagtaatccagcttttcttttattaatataaatccctaaatcgttgtattgggaccacaattttaatttttccctacattttataaaaacaaatggcggcaaaca
gi|25 : aaacacatgttatagttgcaacaaaaggctacgAAATCGTGGTCAACAAAATAAAAAAAAAAGATT----GAACAAATT--TAATATACAGGCA--ACATGA-TCCCTATAGAAGGC-TTCGca
gi|26 : tcatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAATCGCCGCCCACAGTATAACAAA-----ATTAATAGAACAAAACCATAA-----ATGCCCATCATGA-TCACTATAAA
gi|28 : gtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnA-A--------C---ATAGTATAAC-ACAGTTTGCCTC-CC--T--CC-A--CTTTC-AGATG-A-C-CCCC--A-----------TATAAT-GTGTTTCTGA---CTACAAA--------AA--------------CACTGCAAAAA-AA--TCAAAACAA--GTGGTGTTGAAAA-A--TCTAATAT---TTT-GTATGTGTTT-TGTCGTTATTATATAAA---TAAAACTTTAAATGTGGCAGGCATTCTA--GAAGTTCT-GA-TT-T----------
gi|3 : TAGTATAAC-ACGTGTTGCCTC-CC--T--TCTA--CTTTTGAGACG-A-C-CCCTCAA-----------TGTAAT-GTGTTTCTGA---CTTCAA-----CAC-----------------CACCGCAAAAA-A-----AAA-CGA--GTTGTGTT-AAAA-AA-TCTAATAT---TTT-GAAT-TTTTT-TGTCATTGT-----AGA---AAATATTTGAAATATGGCGGG-ATGCTA--GAAGTTCT-GA-TT-T----------T----AT--------A----------G----------C-------AC---AT-G--------T--ATAAAAA-C-AC------ATT--------CGTATA-ATAGCG--TAAACG--TCA-ATAAAA-AAAAT--------GACTGATCTTTA-GAATGACGAA--A-A-GG-AAA--C----AAGAAACATTAACCTTTGCGTGtacagcacatgtataaaaag
gi|3 : GATCTTTAGAATGACGAAAAGGAAACAAGA---AA--CATT----AACCTTTGC---GTGTTTCACC-CTTTCTTTA-ATTAAT----ATAAATAATTCCGAATTGAACGTCAATCTGAAATCGTTGTATTGAGACCAC-AGTTTCAATTTGTC-CCTACATTTTA-CCAAAA-AA-----ATTGTGGCCCAAATATATTGATCGTCGCCTG----GGCCGCT----GAA------Gtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|3 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactTATCGTTGCTGTTGTGATGCGT----A---GTAGT-TGTTTGCATTTTATGTttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|3 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggGAAATCGCCGCCAACAGTATAACACA----GATTA-TAGAACAAGGTCATAAAA---GTGCC--TCACGA-TCGCTGTAGAAGGTATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaaatcgccgccaacagtataacacagattatagaacaaggtcataaaagtgcctcacgatcgctgtagaaggtatcgctacgataacactacgctagcctttcaataaa
gi|30 : tagtataacacgtgttgcctcccttctacttttgagacgacccctcaatgtaatgtgtttctgacttcaacaccaccgcaaaaaaaaacgagttgtgttaaaaaatctaatattttgaatttttttgtcattgtagaaaatatttgaaatatggcgggatgctagaagttctgattttatagcacatgtataaaaacacattcgtataatagcgtaaacgtcaataaaaaaaatgactgatctttagaatgacgaaaaggaaacaagaaacattaacctttgcgtgtttcaccctttctttaattaatataaataattccgaattgaacgtcaatctgaaatcgttgtattgagaccacagtttcaatttgtccctacattttaccaaaaaaattgtggcccaaatatattgatcgtcgcctgggccgctgaagttggggttggggttgtgtgtgtgaggggtggggggtgggggagggtatcgttgctgttgtgatgcgtagtagttgtttgcattttatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaTAGTATAAC-ATGTGTTGCCTC-CC--T--TCCA--CTTTTGAGATG-ACC-CCC---A-----------T-TAAA-ATGTTTC-GA---C--------------AC--------------CACCACAACAA-A---TCAAA-CAA--GTGGTGTT-AAAAGA--TCTAATAT---TTT-GTATGTTTTT-CGTCATTAT-----AGA---TAATACTTTAAAATTGGCAGGTATACTA--GAAGTTCT-GA-TT-cgctacgataacactacgctagcctttcaataaa
gi|31 : -CACATTCATAAAT-G------ATC---AA-ACACATGACCA------TAGTTgtatagcacatgtataaaaaac
gi|32 : agttctaaagacagataaaagaaatttagttatgataatgaaaatatctctttgattcaattatatagatattttctaattttgagttgatgacgacataactgttttgatttatttttttattgtatgcctttttaataaaataaaccaaAA-A--TCTAATAT---TTT-GTATGTTTT--CGTCGTTAT-----AGAAGGTAATACGTTAAATGTTGAAGGTATATAA--CAAGTTCT-GA-TTGT----------ATGGCAC--------A----------AGTATG-----A-------AA---ATAA--------A--AGAAAAC-A-AC------ATA--------TGTATA-ATAGCT--TAAACG--ATA-AT--CA-AAAGT--------GAC-AATTT
gi|34 : T--------CGTATA-ATTGCG--TAAACG--TCA-AT--TA-ATAATT-------GACATATTTTCATGAATTACGAA--A-G-AG-AAATGC----ACA-GA-GTTGACCTTTGTGTGAGTTCATCTCATTATTTTGAAG-----AAACAAAGCAAGT---A---TACT----A-CCTTTTc
gi|35 : ATGAAATCACTGTCAGCAGTATTACACA----GGTTA-TATAACAAATT-GTACT-T-TGTGTC--CCACCA-TCACTATAGAAGGTATTC
gi|37 : ttgaaacgtttggaactattttatcaggcggtggaaCAAAATGTATTTATCGTCACT-------GAAG------GAG------GGA------G-GACTA----TTTTTACCGATACTATACTTAAGCGC----G---GTAGT-CATTTGAATTTCATGTac
gi|38 : -AAAA-A--TCGAATAT---TTT-GTATGGTTTT-C-TCGTTAT-----AGAAGATAATACTTTGAATGTGGCAGGTACACcattttagtggaagctg
gi|39 : gcagactgagagatcaacgttttctgAATCACAGTCAACAGTACAACAAA----GGACA-TAGAACAAACTC--AA-AC-C---TC--TCACAA-CGACTATAGAAGG-ACTCGctatt
gi|4 : TAATAAACAAAAAGAAAT----AAACCTAGAAAGAAAGA-A--------C---ATAGTATAAC-ACGG-TTGGCTCACT--T--T--A--CATTTGAGATG-A-C-CCC---ACCATTATGGCATATAAT-GCGTTTCTGA---C--CAAA-TCGCGTGAAG-------------CA--GCAAAAA-AAAATC-AA-CAA--AAGGTGTTTAAAA-A--GCTGAAAT---TTT-ATATGTTTTT-CGTCGTTAC-----AGA---TAATACTTTAAATGTGGCAGACATACTA--GAAGTTCA-AA-TT-T----------T----AA--------AGTAAATGTATA----------A-------AA---AAAG--------A--CAAAAA--C-AC------ATT--------CGTATA-ATAGCG--TAAATT--TCA-AT--AA-AAAAT--------GACATATTTTCACGAATGGCGAA--A-G-AGAAAAAGC----AT--AGCGTTTACCTTTGTGCAAGTTCAAATCGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAACTATTCCAGC-CTTTCTTTT-ATTAATATTCATGAATAATTCCTAATTGAATGTCAATCTGAAATTTTGTTATTGAGCCCAC-TATTT-AATTTTTC-CCTACATTTTATCAAAAC-AA-----ATGACGGCC-----ATATTAATCGTCGTTTG----GGACACT----TCA------GG-------A-AAATA----TTT------------TACAAATGCGC----A---GTttatggtttgccttccaa
gi|40 : atttaaattaCCT-----GCGGTTGATGGATAGAAAGCAAG----AA-C-----AACAAAC-------------------TATAAC-ACGAGTTGCCTC-AC--TTAT--A--CTTTTGAGACG-ACC-CCC---A-----------TATtaaagggtgggaacctacgtgcatgtgacataggttctccctcttgcagtagtcatttgc
gi|5 : AATGTAGTTACGACCATTAAACACAT----ATAAAACAAA-TACTGTGAAAGACAG----ATG-ATT--TTATTTA--AAAATCAACCAAACAACCT-----TTGGTTGATAGATAAAAAGAAAG----AAAC----GAACAAACA-C--------C---ATAGTATAAC-ACTGATTGCTTT-AT--T--T--ATACTTTTGAGACGTG-T-CCC---A-----------TATAAT-GCATTTCTAA---C--CAAAATCGTACGAA--------------CACCGCAAAAA-AAACGCGAG-CAA--GTGGTGTT-AAAA-AG-TCTAGTAT---TTT-GAATGTATTT-CGTTGTTAT-----AGA---TAATGCTTTAAATATGGCAGACATACTAAAGAAGTTTT-GA-TT-T----------T----AA--------A----------A----------C-------AC---ATAT--------A--CAAAA---T-GC------ATT---------ATATACAT-TCG--TTAACG--TCA-AA--AG-TAAAT--------GACCGATTTTCACAAATAGCGAA--A-G-AG-AAAAGC----ACA-AACATTGACCGTTACG---GTTCAAGTCGATACTTTGAAT-----AAACATAGCACGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCGTTT-ATTTAT----ATGTATAATTCCGAATCGAACGTCAATCTGAAATCGTAGTACTGGGACCAC-AAATTCAATTTT-C-ACTACATTTTA-TAACAA-CA-----ATGGCGGCCATATTAT---TA--GTCGCTTA----GGCCGCC----GAA------GG-------GAGAGGG----GT---ACCGTTGCTAT
gi|6 : AAAAA-C---TCGAA-CAAAAGTGATGTT-AAAA-AA-TCTAATAA---TTT-GTATGTTTTT-CGTCGTTAT-----AGA---TAATACTTTAAATGCGACAGGCATACAA--GAAGTTCT-GA-TT-T----------T----AC--------A----------GCACATGTATGA-------AA---AAAG--------A--CTAAAAA-C-TC------ATT--------CGTATA-AAAGCG--TAAACG--TCA-AT--AA-AAA-T--------GACTTATTTTTATAAAAGACGAAC-A-C-GG-AAAATA----ATA-AACATTTGTCTTTGCGCGAGTTCACATTGACATTTTGAAT-----AAACAAAGCAAGT---A---TACT----A-TCTTTTTAAAGTTTTCCAGC-CTTTCTTT--ATCAAT----ATAAATAATTCCGAAACGAACGTCAATTTAAAACCGTGGTATTGAAACCAC-AA-CTCAATTTTTTACCTGCAATTTC-CAAAAA-AA-----ATGGCTGCCAAAATATATTTATCGTCACTTG----GGACACTGAAAGAA------GG-------G-GACTA----TTTCTACCGTTGCTATATTTATGAGC----A---GTAGT-CGTTTGAATTTCATGTcataa
gi|7 : CCATGAAA-GACACATA-----AA-ACACATGATCA------T------TATAATAGTTGCAACAAAAGTATTCCAT-----ATAATGTAACTACGAGCATAAT-T-TAT----AAATAACAAAAT--T-TGAAAGACAG----GTGCAAT--TTATTTT--ATAATAACCCAAACAAaatttttgtgtaaactgtatgatttgactaccacatacttgaagtttttgactctctgttagatagaacaaaaatcgcaatacaaatttggatttctacgtcttctgctattgcaatagagctaaact
gi|7 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaC----AAACAAACG-A--------C---AATGTATAAC-ACGGATTACCAC-TC--T--TCTA--CTTTTGAGACG-A-CTCCC---A-----------TATAAC-TTGTTTCAGA---C--CAA---TGCGTGAAATTGCATATTTCACCACCACAAAAC-A---TCAAA-CAA--ACATTGTT-AAAA-AAATTCAATAA---TTT--TATGTTTTTTCGTCATTAT-----AGA---TAATACTTTAAATGTGGCAGGCATACTA--GGAGTTC---A-TA-T----------A----GC--------A----------C----------ATGTATATAA---AACG--------A--AAAAAAA-T-AC------ATT--------CGTATT-AAAGCA--CAAACG--TCA-AT--AA-AAAAT--------GACTGATTTTCACGAACGACGAA--A-G-AG-GTAAGCGATAACG-AAacgacaatgtataacacggattaccactcttctacttttgagacgactcccatataacttgtttcagaccaatgcgtgaaattgcatatttcaccaccacaaaacatcaaacaaacattgttaaaaaaattcaataattttatgttttttcgtcattatagataatactttaaatgtggcaggcatactaggagttcatatagcacatgtatataaaacgaaaaaaaatacattcgtattaaagcacaaacgtcaataaaaaatgactgattttcacgaacgacgaaagaggtaagcgataacgaa
gi|8 : attttaatgggaaatgaaacaagacagattgaaagaattttattatgataataaacataattatgttttagttacaaatgtaaaagtatacattttagttttttttttttttcctttttaatataataaaccaaaccatgaaagacacataaaacacatgatcattataatagttgcaacaaaagtattccatataatgtaactacgagcataatttataaataacaaaatttgaaagacaggtgcaatttattttataataaccTGGTTGCCAACTAGATAGAAAG----AAAT----AAACAAACATA--------C----TAGTATAAC-ACTGATTGCCTC-TC--TC-C--A--CTT
gi|8 : t--------------CACCGCAAAAGCA---TCGAA-CAA--GTAGTGTT-AAAA-A--ACTAAAAT---TTT-GTATGTTTTT-CGTCATTGT-----AGA---TACTACTTTAAATGTGGCAGGCATACTT--GAAGTTCT-GA-TTGT----------ATAGCAC--------A----------AGTGTG-----G-------AA---AAAG--------A--AAAAAAATT-AC------CTC--------CGTTTA-AAAGCG--TAAAAG--TCA-AT--AA-TAAAT--------TACTTATTTTCACAAAATACGAATCC-G-TA-AAATAA----ACG-AACATTTGTCTTTGCTCGAGTTCAAATCGATATTTT-AAT-----AAACAAAGCAAAC---A---TGCT----A-CCCTTTTATAGTATTTTAGC-CTTTCTTTT-ATTAAT----ATGAATAATTCCGAATCGAACGATACTCTGAAACCGTGGTATTTAGACCAT-AATTTCGATTACTG-TCTGCATTTTA-CAAAAA-AAAAT--ATGGCTGCCAAAATATATTTATCGTCACTTT----GAACGCT----GAATGAGTGGG-------G-AACTA----TTTTTACCGTTGCTATATTAATGCGC----A---GTAGT-TGTTTGATTTTAATGTcaccgcaaaagcatcgaacaagtagtgttaaaaaactaaaattttgtatgtttttcgtcattgtagatactactttaaatgtggcaggcatacttgaagttctgattgtatagcacaagtgtggaaaaagaaaaaaaattacctccgtttaaaagcgtaaaagtcaataataaattacttattttcacaaaatacgaatccgtaaaataaacgaacatttgtctttgctcgagttcaaatcgatattttaataaacaaagcaaacatgctacccttttatagtattttagcctttcttttattaatatgaataattccgaatcgaacgatactctgaaaccgtggtatttagaccataatttcgattactgtctgcattttacaaaaaaaaatatggctgccaaaatatatttatcgtcactttgaacgctgaatgagtggggaactatttttaccgttgctatattaatgcgcagtagttgtttgattttaatgt
gi|9 : ttggttgccaactagatagaaagaaataaacaaacatactagtataacactgattgcctctctccactt---ACAGTATAAC-ATGGGTTGGCTC-CCTTT--T--A--CTTTTGAGATG-
gi|9 : T---TTT-GTATGTTTTT-CGTCGTTAA-----AGA---TAATACTTCAAATGTGGCAAGCATACTA--GAAGTTCT-AA-TT-T----------T----AA--------AGTAAATGTATA----------A-------AA---AAAG--------A--AAAAAAA-C-AC------ATT--------TGTATA-ATAACG--TAAATG--TCA-AT--AA-AAAAT--------GAC--ATTTTCGCGAA---------A-G-AG-AAAAGC----AC--AACGGTGACCTTTGCTCGAGTTAAAATTGATATTTTGAAT-----AAATAAAGCAAGT---A---TACT----A-CCTTTTTAAAGTATTCCAGC-CTTTCTTTA-ATTAAT----ATAAATACTTCTGAATGGAATGTTAATCTGAAATTGTGGTATTGAGCCCAC-AATTTCAATTTTAC-CCTGCATTTTA-CCAAAACAA-----ATGGCAGCCA-----TATTAATCATCGTTTG----GGATGCT----TCA------GG-------G-AACTA----TTTT------------ACTTATGTGC----A---GTAGTGCGCGTGAttttgagacttttgtatgtttttcgtcgttaaagataatacttcaaatgtggcaagcatactagaagttctaattttaaagtaaatgtataaaaaaagaaaaaaaacacatttgtataataacgtaaatgtcaataaaaaatgacattttcgcgaaagagaaaagcacaacggtgacctttgctcgagttaaaattgatattttgaataaataaagcaagtatactacctttttaaagtattccagcctttctttaattaatataaatacttctgaatggaatgttaatctgaaattgtggtattgagcccacaatttcaattttaccctgcattttaccaaaacaaatggcagccatattaatcatcgtttgggatgcttcagggaactattttacttatgtgcagtagtgcgcgtgacgtaggctctcccccttgcagtagtcgtctgcatttcat
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|22 ): TCGGCCTCGTTATTGATTTAAAACTGTTTACAACTAAAATTCTGTAACACTTTCAGATATTTTGGATCGTTTTTGTTTTTATTTAGGTCTATTTTTTCATCATCTTAAAAATCAATTGTATGCATTGTCAAAATGAAGAACAAATGATTTTTTTTTCAATTACAGTTAATGAAAATTGTTAATTTCACTTACTGATTCAATGTTAACACCATAAACCAGTCATAATTGTCGGTTACAGATTGTTTTTAGTGAATGATTATAAAAAACACACAAAAAAAACCACAAAAAAACCCCA
Unaligned ( gi|27 ): ATTTCATGCCTTCTTGGAATATTAATATAGATTTCTCAGTCAATCGTTTTCCACTGTACTATTATTTAAAATAGTAAAATTATAAATGTTAATTTCACAAAGTTCACAGAAAATAATTATGTTCTCAAATATATTAATATCCATATTATCATATACTCCTGAATAAACCCACTTGGGGGTTGGGGTGGAGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGG
Unaligned ( gi|29 ): TTACCAATGAGCTCATGAATACAGATCGAAAGACAGATAGAAAGAAATTTTGTTATAATGATTTTTTTTAAATGATGATCTATGGATATTCTAATTTTAAGTTGGTGATGACATAATTGTATACATTTTTCTTTTTTATTGTATGTCTGTTTGATATCATAAACCAACGCATAGAAGACCCATCCAACACATTGTA
Unaligned ( gi|33 ): TGATGTATATTAACTAAAATTAGAGTATATTTATAAATGTATTTTTATAGATATTTAAAAGTTATTTCACATTTTAAATTATTTGTTAATGAAAAAAAGATGTCCTTGACTATTGCACGATGCTCAGGTTATGGTG
Unaligned ( gi|36 ): ATGGTTATCTCTCTCATCATATACAGTAAGATACATGTGCTGTATCCCAGAATAAACGCCCCTGCTGGTAATGCAGGGGGTGTGTGTGTGTGTGGGGGGGGGGGCGGG
Unaligned ( gi|41 ): AAATGTATCTTTAAATTTACCAATATAAATAACATACATTTATAAACTAAAAGGCCCTAAAACGTACAACAAAA
Unaligned ( gi|42 ): ATATATAGCTGCGCGCGTGACGTAGGTTCTCCCCCTTGAGTATACTGCACTTCG
Unaligned ( gi|43 ): GAATTTACCAATGAGCTATTGAATACAGATCTCAAGACACATAAAA