lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222222 11111 111111 888888888888888888 11 222222222 1 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111111111 2222222 222222222222 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111 1111 111111 55555555555555555555555555555555555555555555555 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 1 888888888888888888888888888888888888888888 11 222222222222222 11 22 1 3333333333 1 111111 3333333333333 11
lowQualScore : 5 6666666 77777 555 5555 2 777777 2 8888888 777777 444 1 9 777777 3 3 666666666666666666 66 22 66 777777777 6 0 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 7777777777 4 88 99 4 3333333 666 888888888888 888888 999 8888 0 666 4 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111 11 6666 6 7777 3 3 3 333333 0 3 44 00000000000000000000000000000000000000000000000 66 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 4 2 3 666666666666666666666666666666666666666666 55 3 666 33 666666666666666 8 77 3 7 77 5 5 9999999999 3 4 4 4 1 333333 0000000000000 888 6 4 5 99
lowQualScore : . ....... ..... ... .... . ...... . ....... ...... ... . . ...... . . .................. .. .. .. ......... . . ..................................................................................................................... .......... . .. .. . ....... ... ............ ...... ... .... . ... . ................................................................................................................................................................. .... .. .... . .... . . . ...... . . .. ............................................... .. ....................................................................................... . . . .......................................... .. . ... .. ............... . .. . . .. . . .......... . . . . . ...... ............. ... . . . ..
lowQualScore : 9 7777777 00000 000 3333 5 222222 5 1111111 222222 444 8 1 555555 6 6 888888888888888888 99 22 11 999999999 8 9 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 5555555555 0 44 22 4 6666666 444 999999999999 999999 222 5555 4 777 0 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111 77 8888 4 1111 3 3 3 333333 4 3 66 88888888888888888888888888888888888888888888888 99 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 5 7 666666666666666666666666666666666666666666 00 6 444 55 777777777777777 6 55 3 5 00 0 4 9999999999 6 0 4 4 0 222222 9999999999999 888 0 7 7 55
consensus : ATATNTAGACCATCTTGGAGATTGGTTGAAC--TT-TCTTTG--AA----A-TA------T-ATA-------A------T---TCAACTTNGAGAT--TGAACT-TT-TTT-CT----T--TTC-TTTNAA--AT--ATA--C-T-------TCTAGATCATCTTGGAGAACGAAG--TT-NTATGTATA------------------------TTT------------------------CTTTGAAA------TACAT--A--ATNT--A---ACTTG-----------GAGA----------T-GAN-TTTTTCAAATA-GATAATTGAACT-------T---GAAGAT----TT-NC--TTTTT----A-AA-A-AT----ATATAATTCAATTTAAAGACNG-A-AC---T-----TN-TT----------C------------TTTA------GAT-AT-CTTGGANAT---TA---TTT--TTAATATAC---AC--ANNAA----N-GTNAAC--------TTGGGAGATTGA-ATTTTA----------TGTATATA------TAT---GTAGATCATCT--TGGAGA----T-TG-AAC-T-----GTCTTTG-AAA--TATAACATTTA---ACTTGG-AGATTAAAT-TTT----------N---TT-GAAATATATACAAA--TATCTATCANCT-TGGAGA-CNGNACTNT-ANA-ATT--A--TATTTT---TAAAGTT-TAACATTNTAAATAAAAGTTA----A----AA-A-AATATTATCCTGTCTTATGTATTTTGTTGTACCC--AT-----AC-------A-----NAA----C----------GG--TTTG-TA---AA-TAGTA------AC----CT-CTACTAAA-TCAC-TTTCCA-TCAGTATGCTTATATAA--TTTT----CC-GGGCTACATCTGACAC-AAA-CT-TTAT----T-ATTTCATTT-------CTA-CT---TGACCATTGTTTGCCCAGG-TTTCAGTACTNTAAGTACTTTGAT
Reference ( gi|5 ) : ATATTTAGACCATCTTGGAGATTGGTTGAAC--TC-TCTTTG--AA----A-TA------T-ATA-------A------T---TCAACTTTGAGAT--TGATCT-TT-TTTGCTT-TTTTCTTC-TTCCAA--AT--ATA--C-T-------TCTAGAACATCTTGGAGAACGAAG-GTT-ATATGTATA------------------------TTT------------------------CTTTGAAA------TACAT--A--ATTT--A---AATTA-----------GAGA----------T-GAT-TTTTTCAAATA-GATAATTGAACT-------T---GAAGAT----TT-TC--TTTTT----A-AA-A-AT----ATATAATTCAATTTAAAGACTG-A-AC---T-----TG-TT----------C------------TTTA------GATCAT-CTTGGATAT---TA---TTT--TTGATATAC---AC--AGAAA----G-GTAAAC--------TTGGGAGATCGA-ATTTTA----------TGTATGTA------TAT---GTAGATCATCT--TTGAAA----T-TG-AAC-T-----ATCTTTG-AAA--TATAGCGTTTA---ACTTGG-AGATAAAAT-TTT----------A---TT-GAAATATATACAAA--TATCTATCGCCT-TGGAGA-CGGTATTGT-ACA-ATT--A--TATTTT---TAAAATT-TAACATGATAAATAAAAGTTA----A----ACTATAATATTATACTGTCTTAGGCATTTTGTTGTACCC--GT-----AC-------A-----C------C----------GG--TTTG-TA---AT-TAGTA------AC----AC-CTAATAAA-ACAC-TTCCCAATCAGTAGGCTTATGTAA--TTAA----CC-GGGCTACATCTGACAC-AAA-CT-TAAT----T-ATTTCATGT-------CTT-CT---TGATCATTGTTTGCCCATG-TTTCAGTACTTGAAGTACTTTGAT
gi|3 : ACATCTAGGCCATCGGGGCGATTGAGTGAAT--AT-TCTTTG--AG----A-TACTTGTGT-ATA-------A------T---TCAACTT-----------TCT-TT---------------------CAAATAT--ATA--C-A-------TCTGGATTGTCTAAGAGAACGAAGTCTT-TTATGTATA------------------------TTT------------------------CTTTGAAATACATGTACAT--A--ATAGAAA---AATCG-----------GAGA----------T-GGG-GTTTTCCAATA-GTTAA-TAAACT-------T---AATGAC----TT-----TTTTT----A-AA-T-AT----ATATAATTCAATTTAAAGGCT-----T---T-----TATTT----------C------------TTCA------GATCAT-CTTGAATA----TA---TTT--TTAA-ATGC---ACGTAGAAA----T-GTAATA--------TT-GGAAATTGA-ACTTTA----------TGTATACATGAACCTGT---ATAGATCATCT--TGGAGA----T-TG-AGT-T-----GTCTTTG-AAA--TATAATATTCA---ACT
gi|4 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATATATACACAAGCCTAGGGAT--GT--AAC--T----TTTT--AA----A-TA------T-ATA-------A------T---TCAAATTAGAGAT--TAAACTGTT-TTTATTTCTTTTTTTC-TTAGAT--AT--ATA--CATA------TCTATATCATCTTGGAGAATAAAG-GTT-TTATGTATAGTCAATTCAATTTGGAGATTGAACTTC------------------------CTTTAAAA------TACAT--A--ATAG--A---ACTTG-----------GAGG----------T-GAA-TTTT--AAATA-GATAATTTTACT-------T---GAAGAT----TG-ACATTTTTT----A-AATATAT----ATATAATTCATTTAAAAGACTG-A-CC---T-----AT-TT----------C------------TTT----------------------T---TA----------AATATAC---AC--ACGAC----G-ATTAAA--------TTTGGAGATTGG-TTTTCA----------TGTATACC------CAT---CTGGATCATCT--TGGAGA----T-GG-AAT-T-----GTCTTTG-AAA--TATAACATTTA---TCTT---AAATAATAT-T
gi|21 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATAGTTAAACAGTCTTGGAGATTGGTTGAGC--AT-TTTTTA--AA----A-TG------T-ATA-------A------T---TCAACTTT----------TTT-TT-TTTG---------TTC-TTTCAA--AT--ATA--T-T-------TCTAGGTCATCTAGAAGAACGAAG-TTT-ATATGTATT------------------------TTT------------------------CTTAGTAA------TACAT--A--A--T--A-------G-----------GAGA----------T-GAT-TTTTTT-----------TCAAACT-------T---GCAGAT----TT-TG--TTTTactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|16 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTG--AA----AATA------T-ATA-------A------T---TCAACCTAGAGAT--TTAACT-TT-TTT-CTT-ATTCATTC-TTTCAA--ATTTATA--C-T-------TCTAGATCATCTTGATAAACG-------------------------------------------------------------------------AAA------T---T--A--ATAT--A---ATTTG-----------GAGA----------T-TAT-TTGACCAA-TA-GTTAATTGAAC------------GGAAA------T-AC--TTTTT----A-aa
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatATATTTAATTCAGTTTGGAGATTG----AAC--TT-TCTCTG--AAACTCA-TA------T-TTA-------T------T---T--ACTTTGAAAT--tcaaatcttctaatgacctttt
gi|9 : gtaaataaataaataaacttggaaatggaactttttttcgatatacatagttttagatataaacttcaaagtcatcttggaaaattaagatttgtatttTATCTAGATCATCTTTGAGATTA----AAC--TG-TCTTTG--AA----A-TA------T-AGC-------A------T---TTAAATTTaaaatgtttgacattaataattgaaattgaaaattatataatccaatttaaagactgcatatttacacatttagataatcttggagatatttttaaa
gi|6 : ttttttaaatatatcattcaacgggatgtttatttctttgaaactatatacaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgTATGTAGATCATCTTGAGGATTG----AAC--TT-TCTTTGAAAA----A-TA------T-ACA-------AATATCTT---TCAACTGTGGAAT--atacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
gi|1 : gaatataattgaacttaaagatttacatttttgtaaaatgtataattaaatttaaagacagaacgttttttttaaatataaacatttatatcatctttagaaatatgttacacagtaaatgtacacagtaatgtaaacttggtgatcTATGTAGATCATCTGGGAGA----TTGAAC--TG-TTTTTA--AA----A-AG------TGAT--------A------T---TTTACTTGGAGAT--TCAACT-TTATTTGattatgttacagttaaacattctcattaaaggttaattaaagtaaaattattatcctgtcttctgcattttgtcgtttccaagcaacaaacaatggtttgtaaatagtaatctctacatttactaaatatcttttcatcagtatgctaataaaacgttccaggctacttctgcacatactttattattttgtttctacttcagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|31 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatacatctagatcctcttggagattatattttctttgagatacagagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgccAGATCATCTTGGAGAACGATTGAACA-TT-TTTTTT--AA----A-TA------T-ATA-------A------T---ATAACTTAGAGAT--Taagta
gi|20 : ACCATCTTGGCGA----TTGAAC--AT-TTTCT---AA----A-TA------T-ATA-------A------C---T-GTCTTTGAAAT--
gi|15 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatattcaactttcttttaaatATCTTGGAGATTG----AAC--TG-TCTTTG--AA----A-AA------T-AAC-------A------T---TTAATTTGAAGAT--TG----------TACT-------TTC-TTTGAA--AT--ATA--T-T-------TAAATATCATCTTGTAGAACAAAgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|2 : ggagatttttttaaatatacactgaaatgttatgatttttCTTGGAA----GTTGAAC--TT-TCTTTG--AA----A-TA------T-ATATAAAACTA------TCTATCATTCTCGAGAC--TGAACT-TT-ctgtaaatttttattttacagtgaaaccttctgaatagaagttaattaaaagaaaacattatcctgtcttatgtattttgttgtacctatacagcaaacactgttatttagtaatctctactaaaccatattcattcagtatgc
gi|26 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttaAGATTGG---ACC--TT-TATTTA--GT----A-TA------T-ATG-------A------T---TCAACTTAGAGATGGTGTTGT-TC-TTTTCGT-TTTGTTTT-T----A--AT--AT---C-TTCA----TCTAGATCATCTgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|28 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaTTAAAC--GT-TCTTTG--AG------TA------C-ATA-------A------T---TCAACTTGGAGAC--T--TTT-TT-TT
gi|2 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaa-TCTTTT--AA----A-TA------T-TTA-------A------T---TCAACTTAAATAT--TGAAAT-AT-TTT---------------TCAAA--ATGTATA--C-TAGTACTTTCTTGGCCATCTTGGAGAATAAAG-ATT-GT-------------------------------------------------------------TAAGA-------ACATTGA--ATTC--A---ACTTG-----------GAGA----------T-GGA-CTTTTTAAATA-GATAATTGAACT-------TTTAAAAGA---------C--TTTTTCAAAA-AA-A-AA----ATATAATTCAAACTAAGGACAA-A-ACAATT-----TA-TT----------TTAAATATACACATTTA------GATAATGTTTGGAGAT---T----TTG--TTAATATAA---AC--CGTAA----GCGT------------TTG---TATTG--ATTTTG----------TGTATGTT------TACTTAGTATATCATCTGGTAGATT----T-TGCAAC-T-----GTCATTGAAAA--TAAAACATTTT---ACTTGGAAGTTGAACT-TTC----------T---TT-GAAATATATATAAAACTATCTATCATTC-TCGAGA-CTGAACTTT-GAA-A-T--A--TTATTT---TACAATT-C-------TAAGCAAA---TG----A---------AATATTACCCTGCCTTATGTTTTTTGTTGTACCC---T-----AC-------AG----CAAACTAC----------GG--TTTC-TA---AA-TAATA------AC----CT-CTATTAAA-TCAC-TTTCC-ATCAGTATGCTTATATAA--TGTT----CC-GGGCTACATCT--CACTAAA-TT-TTTT----TAATTTCATTT-------CTA-CT---TGACTATTGTTTGCCCAGG-AGTCAGTACTT-AAGTAGTTAGATaaa
gi|17 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcat--AA----A-TA------A-ATA-------A------A---TAAACTTGGAAAT--GGAACT-TT-TTTTCGA-TATACATAGTTTTAG--AT--ATAAAC-T-------TCAAAGTCATCTTGGAAAATTAAG-ATTTGTATTTATA------------------------TTTAATTCAGTTTGGAGATTGAACTTTCTCTGAAA------CTCAT--A---TTT--ATTTACTTT-----------GAAA----------T-AAAATGTTTGACATT-AATAATTGAAAT-------T---GAAAAT----T----------------------------ATATAATCCAATTTAAAGACTGCATAT---T-----TA-CA----------CA-----------TTTA------GATAAT-CTTGGAGA----TA---TTT--TTAAtactcgttgaattaacgatataaagtcatat
gi|1 : gt--ATA--C-A-------TCTAGATCCTCTTGGAGA--------TT-ATAT-----------------------------TTT------------------------CTTTGAGA------TACAa
gi|31 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagAGATCATCTTGGAGAACGA--------T-TGAACA------------------------TTT------------------------TTTTTAAA------TATAT--A--ATAT--A---ACTTA-----------GAGA----------T-gagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|9 : ATGTTTA------------------------TTT------------------------CTTTGAAACTA---TATAC--A--AT----G---ACTTG-----------AAGA----------A-GTT-TTTCTCCAATA-GACAATTGAACTTGATGACT---GAACAT----TT-TC--TTGTT----A-AA-T-AT----ACAT------ATTTA------G-A-A---------------------------------------------------TAT-CTTAGAT-T---TT---TTT--TCAATATGC---AC--ACACA----T-GTAAAC--------TT-CAAGATTTA-A-TTTA----------TG------------TAT---CTAGATCATCT--TTGAGA----T-TA-AAC-T-----GTCTTTG-AAA--TATAGCATTT----------------AAAT-T-------------------------TATACAAA--TACATATCACCT-TGGCGA-CTGAACTGT-G-A-A----A--TA--TT---TAACATT-TAACATTTTAAAGAAAAGTTA-----------------GTTATTCTGTTTGATGTATTTTGTTTTACCC--AC-----ACA------A-----CAAACAAC----------GG--TTTA-AA---AA-TATTA------AC----CT-CTACTAAA-TCAC-TTTCC-ATCAGTATGCTTATTTAA--TGTT----CC-GGGCTACAt
gi|1 : ttttttaaatatatcattcaacgggTT------------------------CTTTGAAA------TCCAT--T--ATTC--AGT-AATCACAGTATGTACAGAGAATGAACGTGGC-GAT-TTTTTAAAATATAATAATTCAACTAAGAAATT---GAACATATTTTT-TT--TTTTT----A-GA-T-ATTTACATCTAGGTCATTTTGGAAATTG-A-AG---T-----TT-TT----------T------------ATTACATTAAAATCAA-CTTAGAGAT---TAAACTTTAACTGAAATACTAAAT--ATAACTTGTG-GTGGACATTTTTATTTGGATAATTGA-ACTTGAACATTGAGTTTGGATGCC------TAT---GTAGATCATCT--GGGAGA----T-TG-AAC-T-----GTTTTTA-AAA--AGTGATATTTT---ACTTGG-AGATTCAAC-TTT----------AT--TT-GAAGTA
gi|7 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatacatctagatcctcttggagattatattttctttgagatacagagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacaTTTGAAT------TGCAT--AGCATT-------ACTTG-----------TATA----------TCGAC-TTTTT-AAATA-GATAAATGAACT-------T---GAAGAC----TG-AC--ATTTC----A-AA-A-AT----ATATAATTCAGTTTAAGGATAG-A-AC---TATTTCTG-TTTAAGCATACAC------------TTTAA-----GATAAT-TTTG---AT---TT---TTT--TAAATATAA---AC--AGTAA----T-GTTAAC--------TTGG-ATATTGA-TTTTT-------------TATATA------TAT----------ACCT--T----A----T-TA-GAT-C-----ATGT--G-GGA--TAT--TGTTCG---ACT-----------GT-CTT---------------T-GAAATATA-AC-----TCTTTA----CT-ATGAAA-TAGTATTTT-AC------------TGTT---CAATATTCTAA----ATAAATAAAA--TA----A----A-----ATGGTACCCTGTCTTATGCATATTGCTGTACCT--AT-----AC-------AACAAACAA----C----------GG--TTTG-TATTGATATAGTA------GC----CT-TTACTAAA-TCTC-TTTCCA-TTAGTATGCTTATGTAA--TGTT----CC-GGCATACATGTGACAC-AAA-CTGTAATATAGT-ATTT
gi|6 : caaaattgagattgaattgtaATAATTGAACT-------T---AAAGAT----TT-ACA-TTTTT----GTAA-A-AT----GTATAATTAAATTTAAAGACAG-A-AC----------G-TT----------T------------TTT---------------TTAAATATAAACA---TTT-----ATAT-C---AT------------------C--------TTTAGAAAT----ATGTTA----------CACA-GTA------AAT---GTACA-CA-------GTAA----TGTA-AAC-TTGGTGATCT------A--TGTAGA--TCA---TCTTGA-GGATTGAAC-TTT----------C---TTTGAAAAATATACAAA--TATCTTTCAACTGTGGA-A-TATTATGTT-ACA-GTTAAA--CATTCT---CA----T-TAA-A-GGTTAATTAAAG-TA----A----A--AT--TATTATCCTGTCTTCTGCATTTTGTCGTTTCCAAGCAACAAAC-------A-----A------T----------GG--TTTG-TA---AA-TAGTAATCTCTAC----AT-TTACTAAATAT-C-TTTTC-ATCAGTATGCTAATAAAACGTT------CC-AGGCTACTTCTG-CAC-ATA-CT-TTAT----T-ATTTTGTTT-------CTA-CT---T
gi|16 : gaatT-------T---GAACAT----TCGTC--TTT------G-AA-A-AT----ATATAATTCAACCTAGAGATTT-A-AC---T-----TT-TT----------T------------CTTA------cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatatatctagaccatctgggagacggaA-A-AT----AAATAAATAAACTTGGAAATGG-A-AC---T-----T---T----------T------------TTTC------GAT-AT------ACAT---AG---TTT--TAGATATAA---AC--TTCAA----A-GTCATC--------TTGGAAAATTAAGATTT-------------GTATTTA------TAT---TTAATTCAGTT--TGGAGA----T-TG-AAC-T-----TTCTCTG-AAACTCATA---TTTATTTACTTTG-AAATAAAATGTTTGACATTAATAA---TT-GAAATttcattctttcaaatttatacttctagatcatcttgataaacgaaattaatataatttggagattatttgaccaatagttaattgaacggaaatactttttatcaaatcttctaatgacctttt
gi|3 : gtAAC--------T--GGTGATTGA-ACTTT-----------TACAAATA------TAT---GT----CATCT--TGGAGA----T-TA-AAG-T-----TTCTTTG-AAA--TATAA----TA---ACT----AAACTAGGT-TTT----------ATATTT-AAAATTGATACtgaaaattatataatccaatttaaagactgcatatttacacatttagataatcttggagatatttttaaa
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatA----------TGTACATA------TAT---GTCGATCATCT--GGGAGA----T-TG-AGT-T-----ATCTTTG-AAT--TATgtcagttcggagatgatgattcggaaattttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|31 : tattggttaagcattggttttatatacAGATCATCT--TGGAGAACGAT-TG-AACAT-----TTTTTTT-AAA--TATATAATATA---ACTTAG-AGATcttattt
gi|15 : TTATCT--TGGAGA----T-TG-AAC-T-----GTCTTTG-AAA--AATAACATTTA---ATTTGA-AGATTGTAC-TTT----------C---TTTGAAATATATTTAAA--TATC-ATC---T-TGTAGAACAA-ACTGT-AAA-TTT--T--TATTTT----ACAGTG-AAACCTTCTGAATAGAAGTTA----ATTAAAAGAAAACATTATCCTGTCTTATGTATTTTGTTGTACCT--AT-----AC-------A-----G------C----------AAACACTGTTA---TT-TAGTA------AT----CT-CTACTAAA-CCATATT--CATTCAGTATGCt
gi|13 : ggagatttttttaaatatacactgaaatgttatgatttAATATATACATA--TATCTATCATCC---GAAC-TATTATTCT-GCA-ATT--AAACATCTTACATAAAGTT-TATTAT-ACAAAT------------------CTTTAAC------CTGTCTTATGTATTTTCTTGTACCC--AT-----AC-------AA----CAAAAAAC----------GG--TTTG-TA---AA-TAGTC------AT----CT-CTGCTCAA-TTAT-TTTCCA-TCAGTATGCTTATACAA--TGCT----CC-GAAATATATCTGACTC-AAA-CT-TAGT------ATTTCAGTT-------CTA-CT---TAACCATTGTTTCCCAATG-TTTCAGTACTTTAAGTACTTTGGT
gi|11 : ATTCAAA--TATCTGTCTCCT-TGGAGA-CTCAACTGTTAGATATT--A--T---TG---TAACATT-TAACATTCTAAATAAAAGTTAGTCTA----AATAGACTATTATCATGTCGTATGTATTTTGCTGTACCC--AT-----AC-------AACAACCAA----C----------GG--TTTT-TA---AA-TATTA------AC----CT-CTTATAAA-TCAT-TTTCCA-TCAGAATGCTGATATAA--TTTT----CC-GCGCTGCATCTGACAC-AAA-CT-TTAT----A-AGTCCATATTTGTTTACTT-CTACTTGACCTTTGTTTGTCCATG-TTTCAGTACTATAAGAACTTTGATtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|8 : agagtttgcaattgcaaaattcacggaatgtttaatttttttccaggtgaAA--CATTTTTCTGCT-TAAAGA-CTGAACTATGAAA-ACT-----TGTTTT---TACAGCT-AAACATTCTAAACAAA---TA----A----AACAAAATATTATCCTGCCTTATGTATTTTGTCGTACAC--CT-----ACGATAAGCA-----T------C----------AA--TTTG-TA---AA-TTGTA------ACTTTTGC-TTTAT-----CAC-TTTCCA-TCAATATGCTTATAAAA--ATAT----TTTGGACTACACTTGACAC-AAAACT-TTAT----T-ATTTAATTT-------CTA-CT---TGACTATTGTTTGCCC-TGATTTTGGTACACTAAGTACTTTGATttctttataatagaacgatgtatataaacc
gi|22 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattgTATTATG-TGTCATAG----TTTGCTGTACAC--AT-----AC-------A-----A------CAACAAGCAATGG--TTTG-TA---AA-TAGTA------GC----CT-CTGCTATA-CGAC-TTTCCA-TCAGTGTGCTTATATAA--TGTT----CC-GAGCTACATCTGAC-C-AAtttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|24 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcacttgTATGTAGTTTGTTATAACA--A------AC-------A-----A------T----------GG--GTTG-TA---AA-TAGTA------A-----ACTCTAATAGA-CCAC-TTTCCA-TCAG----CTTATATA---TTGT----TC-GGACTACTTCTAACAC-AAA-CT-TTAT----T-ATTCCATTT-------CCA-CT---TGACCATTGTTTGCCCAGG-TTTAAGTACCTAGAATGCTTggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|23 : TTGTACCT--AT-----AC-------A-----A------C----------AA-----A-CA---AT--ATTA------AC----CG-CTACTAAA-TCAC-TTTCCA-TGAGTATGCTTCAATAA--TTT-----CC-GTGCTGCTTCCGACAC-AAA-CT-TCAT----T-ATATTATTT-------TGA-CT---TGACCATTGTTTGCCCAGA-TTTCTGTTCTGTAAGTGCTTTGagttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|29 : -TTCC--ATCCGTATGCTTATATA----TAATGTTCT-GGGGCACATCTGGCAG-AAA-CG-TTAT----T-ATTTCAT-T-------CATACT---TGACCATTGTTTGCTCAGG-TTTCAGTACTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
7 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|14 ): GATTTAATTTGAATATTACACTTTCTTTGATAAATGTACATAAATCAATCATCTTGAAGTCTGAACTACGAGGTATTATTTTACAGTTAGTCGTTCGAAAGAAATGTAAGATACAATTGAATATCATTCTGTCTGTCGTATTTTGTAACCACAGAACAACATAAGGTTATCACCTATAGGTATGCTTACATAAGGTTATCACCTATAGGTATGCTTACATAAGGTTATCTCTATTATTTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Unaligned ( gi|27 ): TTTTTCTTACAGTACTTCAGAAACGAAACGACTTTGAAATCAAAACTAATAGGTTCAAAGAAAACACAAAATGACTTTCCCTTGTATGCATTTATATATTTGCACATATCTAGCAACTGCGCTTTGTTTGCATAATTCAACTAGGAGATTGTATCTTTATCT
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111111111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2222222222222 111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111 22222222 333333333333333333333333333333333 666666666666666666666666666666666666 111111 55555555555 111111 1111111
lowQualScore : 1 2 77 0 5 33 2 2 11111111111111 333 4444 4 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 22 2 2 33 666 22 33 7777777 2 55 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 55555 555 6666666 5555555555555 333 666666 444 666666 0 444 7777777 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 2 55555 2 22 2 4 2 22 2 9999999999 2 66666 0 33 22222222 2 111 55555 2 555 1 2 77777 6666 222222222222222222222222222222222 7 3 4 555555555555555555555555555555555555 4 4 88888 3 77777 111111 3 11111111111 44 6666 2 555 888 3 111111 6666 2 44 88 0 0 3 3 1111111 3 666 4 66
lowQualScore : . . .. . . .. . . .............. ... .... . ..................................................................................................................................................................................................... .. . . .. ... .. .. ....... . .. .......................................................................................... ..... ... ....... ............. ... ...... ... ...... . ... ....... .............................................................................................................................................................................................................. . ..... . .. . . . .. . .......... . ..... . .. ........ . ... ..... . ... . . ..... .... ................................. . . . .................................... . . ..... . ..... ...... . ........... .. .... . ... ... . ...... .... . .. .. . . . . ....... . ... . ..
lowQualScore : 0 2 66 8 0 11 9 1 33333333333333 777 5555 5 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 55 4 4 22 555 55 22 6666666 4 66 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 33333 888 8888888 7777777777777 777 777777 111 888888 6 111 6666666 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 1 33333 0 88 0 9 0 88 1 2222222222 4 00000 6 11 77777777 2 555 11111 2 666 8 4 99999 5555 222222222222222222222222222222222 8 3 2 555555555555555555555555555555555555 0 0 33333 1 77777 999999 1 44444444444 22 5555 1 444 555 1 999999 5555 9 22 88 8 3 3 6 8888888 6 444 4 44
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTNGAGA-----TTGAAC--------T-TTT------TT-C---TT-----TT-----C----TTTCAA---A-----T--A---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A------------------------T------------------------TTCTTTGAAA-TAC-A-T--A---ATTCA--AC-------TTGGAG-A--T--G-AN----------TT---T----TTCA-AAT----------------A----------GATA--------A---T-T---G------AACT-----T---GA-------AGA---TTT--A-C--TTT---TT----A-A---A---A--ATATATA---ATTCAATT-------TAGAG--ACT--GA-AC---T-----TNTT-C---T------------T-TAGA-T-A-T-----C----TT--G-----GANA---TT-A---T-----TTTT---A---ATAT---AC-----AC--AGNAAN-GTNAAC--T-TGGGA----GATTGA-A---T---TT-TATG------TA-T--ATA--TA------TGTAG---AT-CATCTTG-----GAGA-TT--G-AACTNTCTTTGAAA-T--A-TA-A-------CATTTAACTTG-GAGATTG-AATT--TT---NTT-GAAAT-ATATACAAA--T--ATCT--ATCATCT-TGGAGACTG-AA----CTNT-GAA--ATTAT-AT--TT----TTANA----GTTNAACA-TTCTAAATAAAA---GT----T------A----A-------A--A--AAA-TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCC-A-----TA------C-A--ACAA-----A--A----CGGTTTGTA---A---ATAG-TAACCTCTAC------TAA----ATCACTTTCC-ATCAGTATGCTTATATA--ATG-TTCCGGGCTACATCTGACAC-AAA-CTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ATATNTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTNGAGA-----TTGAAC--------T-TTT------TT-C---TT-----TT-----C----TTTNAA---A-----T--A---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A------------------------T------------------------TTCTTTGAAA-TAC-A-T--A---ATNTA--AC-------TTGGAG-A--T--G-AN----------TT---T----TTCA-AAT----------------A----------GATA--------A---T-T---G------AACT-----T---GA-------AGA---TTT--N-C--TTT---TT----A-A---A---A--ATATATA---ATTCAATT-------TAAAG--ACN--GA-AC---T-----TNTT-C---T------------T-TAGA-T-A-T-----C----TT--G-----GANA---TT-A---T-----TTTT---A---ATAT---AC-----AC--ANNAAN-GTNAAC--T-TGGGA----GATTGA-A---T---TT-TATG------TA-T--ATA--TA------TGTAG---AT-CATCTTG-----GAGA-TT--G-AACTGTCTTTGAAA-T--A-TA-A-------CATTTAACTTG-GAGATTA-AATT--TT---NTT-GAAAT-ATATACAAA--T--ATCT--ATCANCT-TGGAGACNG-NA----CTNT-ANA--ATTAT-AT--TT----TTAAA----GTTTAACA-TTNTAAATAAAA---GT----T------A----A-------A--A--AAA-TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCC-A-----TA------C-A--N--------A--A----CGGTTTGTA---A---ATAG-TAACCTCTAC------TAA----ATCACTTTCC-ATCAGTATGCTTATATA--ATT-TTCCGGGCTACATCTGACAC-AAA-CTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTNTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAAC--------A-TTT------TT------------TT-----C----A--GAA---ACTATAT--A---TA--C-A-------TATATAGTATATTGACTCTAAGTTAACGAT-G--T--ACTGAGCATCAAAATTGAAC-----------------------T------------------------TTCATTGAAA-AGC-A-C--A---ATTCA--AC-------TTCGGG-A--T--TTAC----------AT---T----TTCA-AAT----------------ATCT-------GTTATCTGGGAGA---T-T----------AACTATCTGT---GA-------AGA---ACT--A-T--CAT---TT----A-A---ATAGG--ATATACA---ATT----T-------TAATA--ATC--G-------T-----TATA-C---A------------C-CAG------------C----TC--GAG---GAGA---AT-GGGCT-----TTTT---A---ATGT---AG-----AT--AATAAA--TAAA---T-TATTA----TAATAA-A---G---TT----A------TA-G--ATA--CA------TCTAG---AT-CCTCTTG-----GAGA-TT--A-TATTTTCTTTGAGA-T--A-CAGA-------GACTGGACTTGTGAG--CA-G-----TT---GT---AAATAATGTAC--A--T--GTGT--ATTATCT-TGG
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgTTGAAC-TT--TCATTGAAA-AG------C-------A---CA----ATTCAACTTCGGGA-----TTTA------------------------C---AT-----TT------------TCAA---A-----T--A---T--------------CTG--TTATCTGGG-----AG--A-------------TTAACTAT-------------------------------------------------------------CTGTGAAG-AACTA-T--C---ATTTA--AA-------TAGGAT-A--T--ACAA----------TT---T----T----AAT----------------A-----------ATC--------G---T-T---ATACACCAGCT-----C---GA-------GGAGAATGG--G-C--TTT---TT----A-ATGTA---G--ATA-ATA---AATAAATTATTATAATAAAGTTATA--GATAC---A-----TCT----------------------AGA-T-CCT-----C----TT--G-----GAGA---TT-A---TATTTTCTTT---G---AGAT---AC-----A-----GAGA-CTGGAC--T-TGTGA----GC---A-G---T---TG-TAAA------TAAT--GTA--CA------TGTGT---AT-TATCTTG-----GTTA-TT--C-AACATTCTTTGAAA-T--ttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaaACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A-------------------GAGA-----CTGGAC--------T-TGTGAGCAGTT-G---T----------------------AA---A-----T--AATGTA--C-A-------TGTGTATTATCTTGG-------------------T--TAT-TCAAC---------A------------------------T------------------------T-CTTTGAAA-TCC-A-T--T---ATTCAGTAA-------TCACAGTA--T--G------------------------T----AC----------------A----------GAGA--------A---T-----G------AACG-----T---GG-------CGA---TTT---------T---TT----A-A---A---AT-ATA-ATA---ATTCAACT-------AAGAA--ATT--GA-AC------------------------------------A-T-A-T-----T----TT---------------TT-T---T-----TTTT---AG--ATAT---TT-----AC--ATCTAG-GTCA-T--T-TTGGA----AATTGA-AGTTT---TT-TAT-------TA-C--AT---TA---------AA---AT-CAACTTA-----GAGA-TT--A-AACTTTAACTGAAA-T--ACTA-A--------ATATAACTTG-ccattattcagtaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagat------------------------TTTTTTAAAA-TAT-AAT--A---ATTCA--AC-------TAAGAA-A--TT-G-AACATATTTTTTTT---T----TTTA-GAT----------------ATTTACATCTAGGTC--------A---T-TTTGG------AAAT-----T---GA-------AGT---TTT--T-T--ATTACATT----A-A---A---A--------------TCAACT-------TAGAG--ATT--AA-AC---T-----TTAA-C---TGAAATA------C-TAAA-T-A-TAA---C----TT--GTGGTGGACA---TT------------TTT---A---TT-T---GG-----AT--AAT-----TGAAC--T-TGA-A----CATTGA-G---T---TT----G------GA-T--GCC--TA------TGTAG---AT-CATCTGG-----GAGA-TT--G-AACTGTTTTTAAAA-A--G-TG-A-------TATTTTACTTG-GAGATTC-AACT--TTA--TTT-GAAGT-Atggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatacatctagatcctcttggagattatattttctttgagatacagagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgaTTA-ATTT--TT---TTC-CAGGT-GAATTCAAA--T--ATCT--GTCTCCT-TGGAGACTC-AA----CTGTTAGAT-ATTAT------T----GTAAC----ATTTAACA-TTCTAAATAAAA---GT----T------AGTCTA-------A--AT-AGACTATT-ATCATGTCGTATGTAT-----TTTGCTGTACCC-A-----TA------C-A--ACAACC---A--A----CGGTTTTTA---A---ATAT-TAACCTCTTA------TAA----ATCATTTTCC-ATCAGAATGCTGATATA--ATT-TTCCGCGCTGCATCTGACAC-AAA-CTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGAT
gi|13 : agagtttgcaattgcaaaattcacggaatgtAAT-ATATACATA--T--ATCT--ATCATC---------CG-AA----CT--------ATTAT------T----CTGCA----ATTAAACA-TCTTACATAAAGTTTAT----T------A----T-------A--C--AAA-TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCC-A-----TA------C-A--ACAAAA---A--A----CGGTTTGTA---A---ATAG-TCATCTCTGC------TCA----ATTATTTTCC-ATCAGTATGCTTATACA--ATG-CTCCGAAATATATCTGACTC-AAA-C-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : ATTTAATTTG-AATATTA-CACT--TT---CTTTGATAA-ATGTACATA--A--ATCA--ATCATCT-TGAAGTCTG-AA----CTAC-GAGGTATTAT------T----TTACA----GTTAGTCG-TTCGAAAGAAAT---GTAAGAT------A----C-------A--ATTGAA-TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACC-A-----CAGAACAAC-A--T--------A--A-----GGTT-ATC---ACCTATAGGTATGCT-TACA-----TAAGGTTATCAC---CT-ATAGGTATGCTTACATA--A--------GGTTAT--------------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G-----GAGA---TT-T---T-----TTTA---A---ATAT---AC-----AC--TGAAAT-GTTA------------------TGA-T---T---TT-TAT----------------------------------------CTTG-----GAGA-TT--G-AACTGTCTTTGAAA-A--A-TA-A-------CATTTAATTTG-AAGATTGTACTT--TC---TTT-GAAAT-ATATTTAAA--------T--ATCATCT-TGTAGAACA-AA----CTGT-AAA--TTTTT-A---TT----TTACA----GTGAAACC-TTCTGAATAGAA---GT----TAATTAAA----A-------G--A--AAA-CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCT-A-----TA------C-AGCA--------A--A----CACTGT-TA---T---TTAG-TAATCTCTAC------TAA----ACCATATTCA-TTCAGTATGC
gi|16 : TT--TC---ATG-GAAAA-ATATAAATA--T--ATCTAGACCATCT-GGGAGACGG-
gi|16 : gtgttcaacttgttattcgtgtttgagatcttATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAAC--------T-TTT------TT-C---TTATTCATT-----C----TTTCAA---ATT---T--A---TA--C-T-------TCTAGATCATCTTGA-----TA--AACGAA-A--T---------------------------------------------------------------------------------------T--A---ATATA--AT-------TTGGAG-A--T--T-A-----------TT---T----GACC-AAT----------------A----------GTTA--------A---T-T---G------AAC----------GG-------AAA-----T--A-C--TTT---TT----A-attgaacattcgtctttgaaaatatataattcaacctagagatttaacttttttcttattcattctttcaaatttatacttctagatcatcttgataaacgaaattaatataatttggagattatttgaccaatagttaattgaacggaaatactttttatcaaatcttctaatgacctttt
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAAC--------T-TTT------TT-TCGATA-----TA-----CATAGTTTTAG---A-----T--A---TAAAC-T-------TCAAAGTCATCTTGG-----AA--AATTAA-GATT--TGTATTTAT---------A------------------------TTTAATTCAGTTTGGAGATTGAACTTTCTCTGAAA-CTC-A-T--ATTTATTTA---C-------TTTGAA-A--T--A-AAA---------TG---T----TTGA-CAT----------------T----------AATA--------A---T-T---G------AAAT-----T---GA-------AAA---TT-----------------------------------ATATA---ATCCAATT-------TAAAG--ACT--GC-AT---A-----TTTA-CACAT------------T-TAGA-TAA-T-----C----TT--G-----GAGA----T-A---T-----TTTT---A---Atcaaatcttctaatgacctttt
gi|2 : gtAC-GT--TCTTTGAAA-TA------C-------C---TA----ATTCAACTTCGAGA-----TTTGAC--------T-TTT------a
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaac------------------------TTCTTTGAAA-TAC-C-T--A---ATTCA--AC-------TTCGAG-A--TTTG-AC----------TT---T----T--A-GAT----------------C----------TATG------------T-T---A------GA-T-----G---GG-------ATA---TTA--A-T--CTT---CT----GTG---A---A--ATATAT------TCAGCT-------TAGTT--ATT--CA-AT---A-----TACA-CA--T------------T-TAGA-TCA-TG----T----TT--G-----GAGA---TT-----T-----TGTT---A---ATAT---AA-----AC--AGTAAGCGT------T-TGT-------ATTGA-T---T---TTGTGTG------TG-T--TTACCTA------TGTAT---AT-CATCTGGTAGATGAAA-TT--G-AAC-ATTTTCACAA-T--A-Tagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAA--------TATTT------TT-C-------------------------AAA---A-----TGTA---TA--C-TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAA-G-----------------------A------------------------T------------------------TG--TTAAGA--AC-A-TTGA---ATTCA--AC-------TTGGAG-A--T--G-GA----------CT---T----TTTA-AAT----------------A----------GATA--------A---T-T---G------AACT-----TTTAAA-------AGA----------C--TTT---TTCAAAA-A---A---A--AAATATA---ATTCAAAC-------TAAGG--ACA--AA-ACAATT-----TATT-T---TAAATATACACATT-TAGA-T-AATG----T----TT--G-----GAGA---TT-----T-----TGTT---A---ATAT---AA-----AC-------C-GTAAGCGTT-TGT-------ATTGA-----T---TT-TGTG------TA-T--GTT--TA------CTTAGTATAT-CATCTGG-----TAGA-TTTTGCAACTGTCATTGAAAAT--A-AA-A-------CATTTTACTTG-GAAGTTG-AACT--TT---CTTTGAAAT-ATATATAAAACT--ATCT--ATCATTC-TCGAGACTG-AA----CTTT-GAA--ATATT-AT--TT----T-------------ACAATTCTAAGCAAAT---G-------------------------------AAA-TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCCTA-----CAG-----C-A--A--------ACTA----CGGTTTCTA---A---ATAA-TAACCTCTAT------TAA----ATCACTTTCC-ATCAGTATGCTTATATA--ATG-TTCCGGGCTACATCT--CACTAAA-TTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTACT-TAAGTAGTTAGATgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaACCATCTTGGCGA----TTGAAC-AT--TTTCT-AAA-TA------T-------A---TA----ACT-GTCTTTGAAA-----Ttactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatattcaactttcttttaaatATAGTTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTTT-----------------------T-TTT------TT-T---TG-----TT-----C----TTTCAA---A-----T--A---TA--T-T-------TCTAGGTCATCTAGA-----AG--AACGAA-GT-T--TATATGTAT---------T------------------------T------------------------TTCTTAGTAA-TAC-A-T--A---ATA---------------GGAG-A--T--G-AT----------TT---T----TTT------------------------------------------------T-C---A------AACT-----T---GC-------AGA---TTT--T-G--TTT---Tgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatCTTGTATTATGTGTCATAGTTTGCTGTACAC-A-----TA------C-A--ACAACAAGCA--A----TGGTTTGTA---A---ATAG-TAGCCTCTGC------TAT----ACGACTTTCC-ATCAGTGTGCTTATATA--ATG-TTCCGAGCTACATCTGAC-C-AAaa
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCT-A-----TA------C-A--ACA------A--A----C-----------A---ATAT-TAACCGCTAC------TAA----ATCACTTTCC-ATGAGTATGCTTCAATA--ATT-T-CCGTGCTGCTTCCGACAC-AAA-CTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA----A-----CA------A-A--C--------A--A----TGGGTTGTA---A---ATAG-TAAACTCTAA------TAG----ACCACTTTCC-ATCAG----CTTATATA---TT-GTTCGGACTACTTCTAACAC-AAA-CTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : AGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTG--T--------T-CTT------TT-CG--TT-----TT-----G----TTTTTA---A-----T--A---T---C-TTCA----TCTAGATCATCTagttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|28 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------AC--------T-TTT------TT-T---T
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaaTTTCC-ATCCGTATGCTTATATATAATG-TTCTGGGGCACATCTGGCAG-AAA-CGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTaaa
gi|3 : AAA-TT--G-AACTTTCTTTGAAA-T--A--A-A-----------TAAC-TG-GTGATTG-AACT--TT----------------TACAAA--T--ATAT--GTCATCT-TGGAGATTA-AAGTTTCTTT-GAA--A-TATAAT--AA----CTAAACTAGGTTTTATA-TTTAAAAT
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaAAC--T---GGT----GATTGA-A---C---TT-T-TA------CA-A--ATA--TA------TGT--------CATCTTG-----GAGA-TT--A-AAGTTTCTTTGAAA-T--A-TA-A-----------TAACT----AAACTA-GGTT--TT----------AT-ATTTA-AAA--TTGATAC--GTCAGTT-CGGAGAtgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT--------------------------------------------------T-----C----TTTCAA---A-----T--A---TATAC-A-------TCTGGATTGTCTAAG-----AG--AACGAA-G--TCTTTTATGTAT---------A------------------------T------------------------TTCTTTGAAA-TAC-A-T--GT--ACATA--ATAGAAAAATCGGAG-A--T--G-GG----------GT---T----TTCC-AAT----------------A----------GTTA--------A---T-----A------AACT-----T---AA-------TGA---CTT-------TTT---TT----A-A---A---T--ATATATA---ATTCAATT-------TAAAG--GCT------T---T-----TATTTC---T------------T-CAGA-TCA-T-----C----TT--G-----AATA---T--A---T-----TTTT---A---A-AT---GC-----ACGTAGAAAT-GTAATA--T-TGGAA-----ATTGA-A---C---TT-TATG------TA-T--ACA--TGAACCTGTATAG---AT-CATCTTG-----GAGA-TT--G-AGTTGTCTTTGAAA-T--A-TA-A-------TATTCAACTtgatgattcggaaattttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATG------TA-C--ATA--TA------TGTCG---AT-CATCTGG-----GAGA-TT--G-AGTTATCTTTGAAT-T--A-T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : ATA--------A---T-T---C------AACT-----TC--GA-------CG--------------TCT---TT----A-A---A---ATAATATATACAAATTCAGTG-------TATTG--ACTCGGA-GC---TAACGGTGTG-C---T----------------GAGC-G-T-----CAAAATT--G-----AAC----TT-----T-----CTCT---G---AAGT---AC-----A-----GAAT--TTAAC--T-TGG-A----GATTGA-G---C---TT-TATT------T------TA--AA------TGTAT---AT-TATCTTG-----GAGATTT--A-AAC--TTTTTGACA-TGAA-TA----------ATTCAACTTA-GATATTT-AATT--TTGCAATT-AAAAT-TTATAC
gi|4 : tttgttatcttaaatgtttatgcTTGAAC-TT--TCTCTGAAG-TA------C-------A---GA----ATTTAACTTGGAGA-----TTGAGC---------------------------T-----TT-----A----TTTTAA---A-----T--G---TA--T--------------ATTATCTTGG-----AG--A---------T--T-----TAA---------A------------------------C------------------------TT-TTTGACA-TGA-A-T--A---ATTCA--AC-------TTAGAT-ATTT--A-AT----------TT---TGCAATTAA-AATTTATACGTCAGCTGTGA----------GATA--------ATGGT-T---G------AACT-----T---G------------------------TTC---AT----G-A---A---G--AAATATA---AATACATC-------TAGA----------------------TCAT-C---T------------TGTAGA-T---T--------------------GAAA---TT-T---C-----TTTT---A---A-AT---ACAATGTAC--ATCA---TTCAAC--T-TGGAA----AATACACG---T---TT-TAAA------GA-T--ATAT-TA------CCT------T-TAAGTTA-----GAGA-T----------TCTTTGAAA-C--A-CA-T-------AATTCAACTTG-GAAATTG-ATTTAATT---TTC-ACAAT-ATATATACA--C--A--------AGCC-TAGGGATGT-AA----CTTT-TTA--AATAT-ATAATTCAAATTAGA----GATTAAgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaa------------------------T------------------------TTCTCTGAAG-TAC-A-G--A---ATTTA--AC-------TTGGAG-AT-T--G-AG----------CTTTAT----TTTA-AAT----------------G----------TAT---------A---T-T----------ATCT-----T---GG-------AGA---TTTAAA-C--TTT---TT------G---A---C--ATGAATA---ATTCAACT-------TAGA-------------------------T-A---T------------T-TA-----A-T-----T----TT--G-----CA-A---TT-A------------A---A---ATTT---AT-----AC---------GTCAGC--TGTGAGATAATGGTTGA-A---CTTGTT-CATGAAGAAATA-TAAATA--CA------TCTAG---AT-CATCTTG-----TAGA-TT--G-AAATTTCTTTTAAA-T--A-CA-ATGTACATCATTCAACTTG-GAAAATA-CACG--TT---TTA-AAGAT-ATAT-------T--ACCT---TTAAGT-TAGAGAactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACAC--------G-TTT------T-----------------------------AA---A-----G--A---TA--T--------------ATTACCTTT--------------AA-G--T--TAGAGAT--------------------------------------------------------------TCTTTGAAA-CAC-A-T--A---ATTCA--AC-------TTGGAA-A--TT-G-AT----------TTAATT----TTCACAAT----------------A----------TATAT-------A---CAC---A------AGCC-----T---AG-------GGA---TGT--AAC--TTT---TT----A-A---A-------TATATA---ATTCAAAT-------TAGAG--ATT--AA-AC---T------GTT-T---T------------T----A-T-T-T-----C----TT---------------TT-T---T-----TCTT---AGATATAT---AC-----AT--ATCTAT-ATCATC--T-TGG-A----GAATAA-AGG-T---TT-TATG------TA-T--A-------------GTCA---ATTCAATTTG-----GAGA-TT--G-AACTTCCTTTAAAA-T--A-CA-T-------AATAGAACTTG-GAGG-TG-AATT--TT--------AAAT-AGAT---AA--T---TTT--A----CT-TGAAGATTGACA----TTTT-TTA--AATAT-AT--AT----ATAA------TT---CA-TT-TAAAttctttgaaacacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTAT-TTC------TT-T---TT-----TT-----C----TTAGAT---A-----T--A---TA--CATA------TCTATATCATCTTGG-----AG--AATAAAGG--T--TTTATGTAT---------AGTCAATTCAATTTGGAGATTGAACT------------------------TCCTTTAAAA-TAC-A-T--A---ATAGA--AC-------TTGGAG-G--T--G-AA----------TT---T----T--A-AAT----------------A----------GATA--------A---T-T---T------TACT-----T---GA-------AGA---TTG--A-CATTTT---TT----A-A---AT--AT-ATATATA---ATTCATTT-------AAAAG--ACT--GA-CC---T-----ATTT-C---T------------T-T------------------------------------TT-A----------------A---ATAT---AC-----AC--ACGACG-ATTAAA--T-TTGGA----GATTGG-T---T---TT-CATG------TA-T--ACC--CA------TCTGG---AT-CATCTTG-----GAGA-TG--G-AATTGTCTTTGAAA-T--A-TA-A-------CATTTATCTT---AAAT---AATA--TT---ACT-Gagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATC--------T-TTT------TTGC---TT-----TTTTCTTC----TTCCAA---A-----T--A---TA--C-T-------TCTAGAACATCTTGG-----AG--AACGAA-GG-T--TATATGTAT---------A------------------------T------------------------TTCTTTGAAA-TAC-A-T--A---ATTTA--AA-------TTAGAG-A--T--G-AT----------TT---T----TTCA-AAT----------------A----------GATA--------A---T-T---G------AACT-----T---GA-------AGA---TTT--T-C--TTT---TT----A-A---A---A--ATATATA---ATTCAATT-------TAAAG--ACT--GA-AC---T-----TGTT-C---T------------T-TAGA-TCA-T-----C----TT--G-----GATA---TT-A---T-----TTTT---G---ATAT---AC-----AC--AGAAAG-GTAAAC--T-TGGGA----GATCGA-A---T---TT-TATG------TA-T--GTA--TA------TGTAG---AT-CATCTTT-----GAAA-TT--G-AACTATCTTTGAAA-T--A-TA-G-------CGTTTAACTTG-GAGATAA-AATT--TT---ATT-GAAAT-ATATACAAA--T--ATCT--ATCGCCT-TGGAGACGG-TA----TTGT-ACA--ATTAT-AT--TT----TTAAA----ATTTAACA-TGATAAATAAAA---GT----T------A----A-------ACTA--TAA-TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCC-G-----TA------C-A--C----------------CGGTTTGTA---A---TTAG-TAACACCTAA------TAA----AACACTTCCCAATCAGTAGGCTTATGTA--ATT-AACCGGGCTACATCTGACAC-AAA-CTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : ATA--------A---T-T---G------AACT-----T---AA-------AGA---TTT--A-CA-TTT---TT----GTA---A---A--ATGTATA---ATTAAATT-------TAAAG--ACA--GA-AC---G-----TTTT-T---T------------T-TAAA-T-A-TAAACAT----TT---------ATA---TC-A---T-----CTTT---AGAAATATGTTAC-----AC--AGTAA----------------------------------------ATG------TA-C--ACAG-TAA-----TGTAA---A-----CTTG-----G-----T--G-A----TCTATG----T--A-GA-T-------CAT----CTTG-AGGATTG-AACT--TT---CTTTGAAAA-ATATACAAA--T--ATCT--TTCAACTGTGGA-----------------ATA---TTAT-GT--T-------ACA----GTTAAACA-TTCTCATTAAAG---GT----T------A----ATTAAAGTA--A--AAT-TATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCC-AAGCAACA------A-A--C--------A--A----TGGTTTGTA---A---ATAG-TAATCTCTACATTTACTAA----ATATCTTTTC-ATCAGTATGCTAATAAA--ACG-TTCCAGGCTACTTCTG-CAC-ATA-CTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGAAT-TGC-A-T--A---GCATT--AC-------TTGTAT-A--TC-G-AC----------TT---T----TT-A-AAT----------------A----------GATA--------A---A-T---G------AACT-----T---GA-------AGA---CTG--A-C--ATT---TC----A-A---A---A--ATATATA---ATTCAGTT-------TAAGG--ATA--GA-AC---T-----ATTT-C---TGT----------T-TAAG-C-A-TACA--C----TTTAA-----GATAATTTTGA---T-----TTTTTTAA---ATAT---AA-----AC--AGTAAT-GTTAAC--T-TGG-A----TATTGA-T---T---TT-T----------------TA--TA------TATAT---AC-CTTATT-------AGA-TC--A----TGT----GGGA-T--A-T----------TGTTCGACT-----G-----------TC---TTT-GAAAT-ATA-AC------------------TCT-T---------TA----CTAT-GAA--ATAGT-AT--TT----T-ACT----GTTCAATA-TTCTAAATAAA----------T------A----A-------A--ATAAAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCT-A-----TA------C-A--ACAAAC---A--A----CGGTTTGTATTGAT--ATAG-TAGCCTTTAC------TAA----ATCTCTTTCC-ATTAGTATGCTTATGTA--ATG-TTCCGGCATACATGTGACAC-AAA-CTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAAC--------A-TTT------TT-C---Tagtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--C--ATTT--TTCTGCT-TAAAGACTG-AA----CTATGAAA--ACT-T-GT--TT----TTACA----GCTAAACA-TTCTAAACAAA----------T------A----A-------A--ACAAAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACAC-C-----TA------CGA--T--------A--AGCATCAATTTGTA---A---ATTG-TAACTTTTGC------TTT----ATCACTTTCC-ATCAATATGCTTATAAA--AATATTTTGGACTACACTTGACAC-AAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG----------------------TT-T---AT-----TT-----C----TTTGAAACTA-----T--A---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : ATGTTT---------A------------------------T------------------------TTCTTTGAAACTAT-A-T--A---CAATG--AC-------TTGAAG-A--A--G-TT----------TT---T----CTCC-AAT----------------A----------GACA--------A---T-T---G------AACT-----T---GATGACTGAACA---TTT--T-C--TTG---TT----A-A---A---T--ATACATA---------TT-------TAGA-------------------------------------------------A-T-A-T-----C----TT--A-----GATT---TT-----T-----TTTC---A---ATAT---GC-----AC--ACACAT-GTAAAC--T-TCA-A----GATTTA-A---T---TT-----------------ATG--TA------TCTAG---AT-CATCTTT-----GAGA-TT--A-AACTGTCTTTGAAA-T--A-TA-G-------CATTTAA--------------ATT--T----------------ATACAAA--T--ACAT--ATCACCT-TGGCGACTG-AA----CTGT-GAA--AT----AT--TT------AAC----ATTTAACA-TTTTAAAGAAAA---GT----T------A----G-------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCC-A-----CA------C-A--ACAAAC---A--A----CGGTTTAAA---A---ATAT-TAACCTCTAC------TAA----ATCACTTTCC-ATCAGTATGCTTATTTA--ATG-TTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Unaligned ( gi|27 ): TTTTTCTTACAGTACTTCAGAAACGAAACGACTTTGAAATCAAAACTAATAGGTTCAAAGAAAACACAAAATGACTTTCCCTTGTATGCATTTATATATTTGCACATATCTAGCAACTGCGCTTTGTTTGCATAATTCAACTAGGAGATTGTATCTTTATCT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111111111 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 2222222222222222222 6666666666666666666666666666666666666 33333333333 111111 1111111
lowQualScore : 2 7 0 4 33 1 2 33333333333333 333 4444 3 55555 333 5555 2 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2 44 555555 55555 1 44 1 22 2 3333 777777 1 22 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 444 2 6 1 55 8888 0000000000000000000 1 5555555 1 55 2 1111111111111111111111111111111111111 4 4 88888 33333333333 44 0 555 888 3 111111 6666 2 44 3 0 3 3 1111111 3 666 4 1 0
lowQualScore : . . . . .. . . .............. ... .... . ..... ... .... . ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ . .. ...... ..... . .. . .. . .... ...... . .. ............................................................................................................................................................... ... . . . .. .... ................... . ....... . .. . ..................................... . . ..... ........... .. . ... ... . ...... .... . .. . . . . ....... . ... . . .
lowQualScore : 2 3 1 7 11 5 1 88888888888888 777 5555 8 33333 555 0000 4 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 00 888888 00000 9 33 8 55 3 9999 000000 8 55 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 111 6 1 3 88 9999 1111111111111111111 5 2222222 0 77 2 9999999999999999999999999999999999999 0 0 33333 77777777777 22 2 444 555 1 999999 5555 9 22 1 3 3 6 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT----TT-T------TT-C---T------TT-----C----TT-TCAAA-------TA---TA--C---T-------TCTAGATCATCTTGG-----AG--AACGAAG--T--TNT-ATGTAT---------A------------------------T------------------------T----TC----------------TTTGA--AA---TAC-A-T------A---ATTCA--AC--TTGGAG-A--T--G-AN----------TT---T----T--TCA-A---------AT----------------A----------G-----ATA--------AT---T---G------AACT-----T-G------A-------AG---------A---T-----T-T----A-C--TTT--TTA---A---A---A--ATATAT--A---ATTCAATT--TAGA--------------GACT--GAACT-------------TNT-----T-C---T------TT-AGA-T-A-T-----------------C----TT---G-----GANATTA----T-T----T---TT------A---A-T--AT---A--CAC-------A---GNAA-NGTNAACTTGGGA-GATTGA-A---TTT-TATGTA---T-----------ATA--TA------T---GT-AG-ATCAT------CTTG-----GA-GA--TTG-AAC--TNTC----TTTG------A-AAT--A--TA-----ACAT-----T---TAACT------T-----G-----GAGATTG----A-A--T-------TT--------T----------TTT-G-A-----AAT-A------------T---------ATACA-AA--T--A---TCT--A-------TCA--TCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---T---TTACAG-TTNAACATTCTAAATAAA-A---GT----T------A----A-------A--A--AAA-TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA-----AC-A--C--GGTTTGTA---A---ATAG-TAACCTCTAC------TAA----ATCACTTTCC-ATCAGTATGCTTATA--TAA-TGTTCCGGGCTACATCTGACAC-AAA-CTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTNGAGA-----TTGAACT----TT-T------TT-C---TT-----TT-----C----TT-TCAAA-------TA---TA--C---T-------TCTAGATCATCTTGG-----AG--AACGAAG--T--TNT-ATGTAT---------A------------------------T------------------------T----TC----------------TTTGA--AA---TAC-A-T------A---ATTCA--AC--TTGGAG-A--T--G-AN----------TT---T----T--TCA-A---------AT----------------A----------G-----ATA--------AT---T---G------AACT-----T-G------A-------AG---------A---T-----T-T----A-C--TTT--TTA---A---A---A--ATATAT--A---ATTCAATT--TAGA--------------GACT--GAACT-------------TNT-----T-C---T------TT-AGA-T-A-T-----------------C----TT---G-----GANATTA----T-T----T---TT------A---A-T--AT---A--CAC-------A---GNAA-NGTNAACTTGGGA-GATTGA-A---TTT-TATGTA---T-----------ATA--TA------T---GT-AG-ATCAT------CTTG-----GA-GA--TTG-AAC--TNTC----TTTG------A-AAT--A--TA-----ACAT-----T---TAACT------T-----G-----GAGATTG----A-A--T-------TT--------T----------NTT-G-A-----AAT-A------------T---------ATACA-AA--T--A---TCT--A-------TCA--TCTTGGAGACTGA--A----CTNT------GAA--AT--TATATT---T---TTANAG-TTNAACATTCTAAATAAA-A---GT----T------A----A-------A--A--AAA-TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA-----A--A--C--GGTTTGTA---A---ATAG-TAACCTCTAC------TAA----ATCACTTTCC-ATCAGTATGCTTATA--TAA-TGTTCCGGGCTACATCTGACAC-AAA-CTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA----TT-T------TT-------------------------T-TCAGAAACTATATA---TA--C---A-------TATATAGTATATTGACTCTAAGTTAACGATG--T--ACT-GAGCATCAAAATTGAAC-----------------------T------------------------T----TC----------------ATTGA--AA---AGC-A-C------A---ATTCA--AC--TTCGGG-A--T--TTAC----------AT---T----T--TCA-A---------AT----------------ATCT-------G-----TTATCTGGGAGAT---T----------AACTATCTGT-G------A-------AG---------A---A-----C-T----A-T--CAT--TTA---A---ATAGG--ATATAC--A---ATT----T--TAAT--------------AATC--G---T-------------TAT-----A-C---A------CC-AG------------------------C----TC---GAG---GAGAATGGGC-T-T----T---TT------A---A-T--GT---A--GAT-------A---ATAA-A-TAAA-TTATTA-TAATAA-A---GT----TATA---G-----------ATA--CA------T---CT-AG-ATCCT------CTTG-----GA-GA--TTA-TAT--TTTC----TTTG------A-GAT--A--CAG----AGAC-----T---GGACT------T-----GT----GAG---C----A-G--T-------TG--------T----------------A-----AATAA------------T---------GTAC---A--T--G---TGT--A-------TTA--TCTTGGTTATTCA--ACATTCTTT------GAA--AT--
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgTTGAAC-TT--TCATTGAAA-AG------C-------A---CA----ATTCAACTTCGGGA-----TTTA--------------------C---AT-----TT-------------TCAAA-------TA---T----------------CTG--TTATCTGGG-----AG--A------------TT-AACTAT-----------------------------------------------------------------C----------------TGTGA--AG---AACTA-T------C---ATTTA--AA--TAGGAT-A--T--ACAA----------TT---T----T------A---------AT----------------A----------------ATC--------GT---T---ATACACCAGCT-----C-G------A-------GG---------AGAAT-----G-G----G-C--TTT--TTA---ATGTA---G--ATA-AT--A---AATAAATTATTATA--------------A--T--AAAGT-------------TATAGATAC-A---T------CT-AGA-T-CCT-----------------C----TT---G-----GAGATTA----TAT----T---TT------C---T-TTGAG---A--TAC-------A---GAGA-C-TGGACTTGTGA-GC---A-G---TTG-TAAATAA--T-----------GTA--CA------T---GT-GT-ATTAT------CTTG-----GT-TA--TTC-AAC--ATTC----TTTG------A-AAT--C--CA-----TTAT-----TCAGTAATCACAGTAT-----GTACA-GAGAATG----A-A--CGTGGCGATT--------T----------TTT-A-A-----AAT-A------------T---------A-AT--AA--T-------------------TCA--ACTAAGAAATTGA--A----C-------------------ATATT---T---TTccattattcagtaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaaACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A-------------------GAGA-----CTGGACT----TG-TGAGCAGTT-G---T-----------------------AAA-------TAATGTA--C---A-------TGTGTATTATCTTGG------------------T--TAT--TCAAC---------A------------------------T------------------------T-----C----------------TTTGA--AA---TCC-A-T------T---ATTCAGTAA--TCACAGTA--T--G--------------------------T-------------AC----------------A----------G-----AGA--------AT-------G------AACG-----T-G------G-------CG---------A---T-----T-T-----------T--TTA---A---A---AT-ATA-AT--A---ATTCAACT--AAGA--------------AATT--GAAC----------------------------------------A-T-A-T-----------------T----TT-------------TTT----T-T----T---TT------AG--A-T--AT---T--TAC-------A---TCTA-GGTCA-TTTTGGA-AATTGA-AGTTTTT-TAT-TA---C-----------AT---TA-------------AA-ATCAA------CTTA-----GA-GA--TTA-AAC--TTTA----ACTG------A-AAT--AC-TA-----A-AT-----A---TAACT------T-----G-----T-GGTGG----ACA--T-------TT--------TTATTTGGATAATT-G-AACTTGAAC-A------------TTGAGTTTGGATGCC-TA--T--G---TAG--A-------TCA--TCTGGGAGATTGA--A----CTGTTTTTAAAAA--GT--GATATT---TTACTTGGAGATTCAACTTTtttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagat------------------------T----TT----------------TTTAA--AA---TAT-AAT------A---ATTCA--AC--TAAGAA-A--TT-G-AACATATTTTTTTT---T----T--TTA-G---------AT----------------ATTTACATCTAG-----GTC--------AT---TTTGG------AAAT-----T-G------A-------AG----------------------------T--TTT--TTA---T-----------TACATTAA---AATCAACT--TAGA--------------GATT--AAACT-------------TTA-----A-C---TGAAATACT-AAA-T-A-TAA---------------C----TT---GTGGTGGACATTT----T-TA---T---TT------G---G----AT---A-------------------A-T-TGAACTTGA-A-CATTGA-G---TTT----GGA---T-----------GCC--TA------T---GT-AG-ATCAT------CTGG-----GA-GA--TTG-AAC--TGTT----TTTA------A-AAA--G--TG-----ATAT-----T---TTACT------T-----G-----GAGATTC----A-A--C-------TT--------TA---------TTT-G-A-----AGT-A------------atttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatacatctagatcctcttggagattatattttctttgagatacagagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgaTTT----A-A--T-------TT--------T----------TTT-CCA-----GGT-G------------A---------ATTCA-AA--T--A---TCT--G-------TCT--CCTTGGAGACTCA--A----CTGT------TAG--AT--ATTATT---G---TAACA--TTTAACATTCTAAATAAA-A---GT----T------AGTCTA-------A--AT-AGACTATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAACC---A--A--C--GGTTTTTA---A---ATAT-TAACCTCTTA------TAA----ATCATTTTCC-ATCAGAATGCTGATA--TAA-TTTTCCGCGCTGCATCTGACAC-AAA-CTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGAT
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACA-TA--T--A---TCT--A-------TCA--TCC--------GA--A----CT-------------AT--TAT------T---CTGCAA-TTAAACATCTTACATAAA-GTTTAT----T------A----T-------A--C--AAA-TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA-----A--AAAC--GGTTTGTA---A---ATAG-TCATCTCTGC------TCA----ATTATTTTCC-ATCAGTATGCTTATA--CAA-TGCTCCGAAATATATCTGACTC-AAA-C-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----T---TAATT------T-----G-----AATATTA----C-A--C-------TT--------T----------CTTTG-A-----TAA-A------------T---------GTACA-TA--A--A---TCA--A-------TCA--TCTTGAAGTCTGA--A----CTAC------GAGGTAT--TAT------T---TTACAG-TTAGTCGTTCGAAAGAAA-T---GTAAGAT------A----C-------A--ATTGAA-TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAA-----C--A--TAAGGTT-ATC---ACCTATAGGTATGCT-TACA-----TAAGGTTATCAC---CT-ATAGGTATGCTTACA--TAA-GGTT---------AT------------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g---G-----GAGATTT----T-T----T---TA------A---A-T--AT---A--CAC-------T---GAAA-TGTTA------------TGA-T---TTT-TAT----------------------------------------------------CTTG-----GA-GA--TTG-AAC--TGTC----TTTG------A-AAA--A--TA-----ACAT-----T---TAATT------T-----G-----AAGATTGT---A-C--T-------TT--------C----------TTT-G-A-----AAT-A------------T---------ATTTA-AA-----------T--A-------TCA--TCTTGTAGAACAA--A----CTGT------AAA--TT--TTTA-T---T---TTACAG-TGAAACCTTCTGAATAGA-A---GT----TAATTAAA----A-------G--A--AAA-CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA-----AC-A--C--TGTTATT---------TAG-TAATCTCTAC------TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT----TT-T------TT-C---TTATTCATT-----C----TT-TCAAATT-----TA---TA--C---T-------TCTAGATCATCTTGA-----TA--AACGAAA--T--TA--ATATA----------A------------------------TTTGGAGA-----------------T----TA----------------TTTGACCAA---TAG-T-T------A---ATTGA--AC----GGAA-A--T----AC----------TT---T----TTATCA-A---------AT----------------
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT----TT-T------TT-TCGATA-----TA-----CATAGTT-TTAGA-------TA---TAAAC---T-------TCAAAGTCATCTTGG-----AA--AATTAAGATT--TGT-ATTTAT---------A------------------------TTTAATTCAGTTTGGAGATTGAACTT----TC----------------TCTGA--AA---CTC-A-T------ATTTATTTA---C--TTTGAA-A--T--A-AAA---------TG---T----T--TGA-C---------AT----------------T----------A-----ATA--------AT---T---G------AAAT-----T-G------A-------AA---------A---T-----T-----------------------------------ATAT--A---ATCCAATT--TAAA--------------GACT--GCATA-------------TTT-----A-CACAT------TT-AGA-TAA-T-----------------C----TT---G-----GAGA-TA----T-T----T---TT------A---A-cttctaatgacctttt
gi|2 : gtAC-GT--TCTTTGAAA-TA------C-------C---TA----ATTCAACTTCGAGA-----TTTGACT----TT-T------a
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaac------------------------T----TC----------------TTTGA--AA---TAC-C-T------A---ATTCA--AC--TTCGAG-ATTT--G-AC----------TT---T----T----A-G---------AT----------------C----------T-----AT---------GT---T---A------GA-T-----G-G------G-------AT---------A---T-----T-A----A-T--CTT--CTGT--G---A---A--ATAT--------ATTCAGCT--TAGT--------------TATT--CAATA-------------TAC-----A-CA--T------TT-AGA-TCA-TG----------------T----TT---G-----GAGATT-----T-T----G---TT------A---A-T--AT---A--AAC-------A---GTAAGCGT----TTG----TATTGA-T---TTTGTGTGTG---T-----------TTACCTA------T---GT-AT-ATCAT------CTGGTAGATGA-AA--TTG-AACATTTTCACAATATGTACAATA-AAT--A---A-----ACGTAGGCAT---TCTTT------T-----A-----AATATTT----A-A--T-------TCAACTTAAAT----------ATT-G-A-----AAT-ATTTTTCAAAATGT---------ATACT-AG--T--ACTTTCTTGG-------CCA--TCTTGGAGAATAAAGA----TTGTTAA---GAAC-AT--TGAATTCAAC---TTGGAG-ATGGACTTTTTAAATAGATA---AT----T------G----A-------A--agatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT----AT-T------TT---------------------------TCAAAATG----TA---TA--C---TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAAGA-T--TGTTAAGAAC---------A------------------------T------------------------TGAATTCAACTTGGAGATGGACTTTTTA--AA---TAG-A-T------A---ATTGA--AC--TTTTAA-A--A--G-AC----------TT---T----T--TCA-A---------AA----------------A----------AAAAATATA--------AT---TC--A------AACT--------------A-------AGGACAAAACAA---T-----T-T----A-T--TTT------------A---A--ATATAC--A------C-ATT--TAGA------------------------------------------------------------T-A-A-T-G-T----------------------TT---G-----GAGATT-----T-T----G---TT------A---A-T--AT---A--AAC-------C---GTAAGCGT----TTG----TATTG--A---TTT-TGTGTA---T-----------GTT--TA------CTTAGT-AT-ATCAT------CTGG-----TA-GATTTTGCAAC--TGTC----ATTGA-----A-AAT--A--AA-----ACAT-----T---TTACT------T-----G-----GAAGTTG----A-AC-T-------TT--------C----------TTT-G-A-----AAT-A------------T---------ATATA-AAACT--A---TCT--A-------TCA--TTCTCGAGACTGA--A----CTTT------GAA--A---TATTAT---T---TTACA--------ATTCTAAGCAAA-T---G-------------------------------AAA-TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA-----ACTA--C--GGTTTCTA---A---ATAA-TAACCTCTAT------TAA----ATCACTTTCC-ATCAGTATGCTTATA--TAA-TGTTCCGGGCTACATCT--CACTAAA-TTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------A-AAT--A--C-------CAT------------CT------T-----G-----GCGATTG----A-ACAT-------TT--------T----------CT----A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|20 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatACCATCTTGGCGA----TTGAAC-AT--TTTCT-AAA-TA------T-------A---TA----ACT-GTCTTTGAAA-----Tactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatattcaactttcttttaaatTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTTT---------------T----TT-T------TT-T---TG-----TT-----C----TT-TCAAA-------TA---TA--T---T-------TCTAGGTCATCTAGA-----AG--AACGAAGT-T--TAT-ATGTAT---------T------------------------T------------------------T----TC----------------TTAGT--AA---TAC-A-T------A---AT--A--------GGAG-A--T--G-AT----------TT---T----T--TT-----------------------------------------------------------T---C---A------AACT-----T-G------C-------AG---------A---T-----T-T------T--GTT--TTA---A---gaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCA--A--T--GGTTTGTA---A---ATAG-TAGCCTCTGC------TAT----ACGACTTTCC-ATCAGTGTGCTTATA--TAA-TGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA-----A-----C-------------A---ATAT-TAACCGCTAC------TAA----ATCACTTTCC-ATGAGTATGCTTCAA--TAA-T-TTCCGTGCTGCTTCCGACAC-AAA-CTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA-----ACAA-AC-----A--A--T--GGGTTGTA---A---ATAG-TAAACTCTAA------TAG----ACCACTTTCC-ATCAG----CTTATA--TAT-TGTTC-GGACTACTTCTAACAC-AAA-CTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTC-ATGTAG---------T------------------------T------------------------TA---TC----------------TTTGA--AA---AAC-A-T------A---ATTCA--GT--TTGGA-----------------------T---T----T--TCA-ACGTTGCTTTAC----------------A----------GTTAC-ACA--------GTA--T---GCA----AATT-----A-A------A-------AG---------A---T-----TGG----A-C--CTTTATTT---A---G---T--ATATAT--G---ATTCAACT--TAGA--------------GA-T--GGTGT-------------TGT-----T-C---T------TT---------T-----------------CG---TT-------------TTG----T-T----T---TT------A---A-T--AT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTG--TT----CT-T------TT-CG--TT-----TT-----G----TT-TTTAA-------TA---T---C---TTCA----TCTAGATCATCTcttcatctagatcatct
gi|28 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT----TT-T------TT-T---T
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaaTTTCC-ATCCGTATGCTTATATATAA-TGTTCTGGGGCACATCTGGCAG-AAA-CGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTaaa
gi|3 : A-AA--TTG-AAC--TTTC----TTTG------A-AAT--A---A-----A------------TAACT------------G-----GTGATTG----A-A--C-------TT--------T--------------------------------------------------TACA-AA--T--A---TAT--G-------TCA--TCTTGGAGATTAA--AGTTTCTTT------GAA--A---TATA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaTTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT----TT-T------A-----------------------------CAAA-------TA---TA--T----------------GTCATCTTGG-----AG--ATTAAAG-------------------------------------------------T------------------------T----TC----------------TTTGA--AA---TATAA-T------A---ACTAA--AC--T---AG-G--T-----T----------TTATAT----T--TAA-A---------AT----------------T----------G-----ATA--------CG---T---C------AGTT-----C-G------G-------AG---------A---TGATGAT-TCGGAA-A--TTT--TCATGGA---G---A--A-ATAT--A---ATTACATC--TAGGCCATCGGGGCGATTGAGT--GAA---------------TAT-----T-C---T------TTGAGA-T-A-------------------C----TT---G-----TGTATAA----T-TCAACT---TTCTTTCAA---A-T--AT---A--TAC-------ATCTGGAT-TGTC----TAAGA-GAACGA-AGTCTTT-TATGTA---TATTTCTTTGAAATA--CA------T---GT-AC-ATAATAGAAAAATCG-----GA-GA--TGG-GGT--TTTC----C-----------AAT--AGTTA-----ATA-----------AACT------T--------------AATG----A-C--T-------TT--------T----------TTT---A-----AAT-A------------T---------ATATA-AT--TCAA---TTT--AAAGGCTTTTATTTCTT-CAGA-TCA--T----CT-T------GAA------TATATT---T---TTAAAataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT--GGT-GATTGA-A---CTT-T-TACA---A-----------ATA--TA------T---GT------CAT------CTTG-----GA-GA--TTA-AAG--TTTC----TTTG------A-AAT--A--TA-----A------------TAACT-------------------AAACTA----G-G--T-------TT--------T-----------------------AT-A------------T---------TTA-A-AA--TTGA---TAC--G-------TCA--GTTCGGAGA-TGATGA----TTCG------GAA--AT--Ttgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatA--AA---TAT-A-T------G-----TCA--TC--TTGGAG-A--TTAA-AG----------TT---TCT--T--TGA-A---------AT----------------AT---------A-----ATA--------AC---T---A------AACT--------------A-------GG---------T---T-----T-T----A----TAT--TTA---A---A---A--TTG-AT--A---CGTCAGTT--CGGA--------------GA-T--GA--T-------------GAT-----T-C-------------GGA-A-A-T-----------------T----TTCATG-----GAGA--------------------------A---A-T--AT---AATTAC-------A---TCTA-GGCCA--TCGGGGCGATTGA-G---T------GAA---T-----------AT---TC------T---TTGAG-ATACT------TGTG-----TATAA--TTC-AAC--TTTC----TTTC------A-AAT--A--TAT----ACAT-----C---TGGAT------T-----GTCTAAGAGAACG----A-A--G-------TC--------T----------TTT----------AT-G------------T---------ATAttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT----------------------------------------------T-----C----TT-TCAAA-------TA---TATAC---A-------TCTGGATTGTCTAAG-----AG--AACGAAG--TCTTTT-ATGTAT---------A------------------------T------------------------T----TC----------------TTTGA--AA---TAC-A-TGTACATA---ATAGA--AAAATCGGAG-A--T--G-GG----------GT---T----T--TCC-A---------AT----------------A----------G-----TTA--------AT-------A------AACT-----T-A------A-------TG---------A---C-----T-T---------TTT--TTA---A---A---T--ATATAT--A---ATTCAATT--TAAA--------------GGCT-----TT-------------TAT-----TTC---T------TC-AGA-TCA-T-----------------C----TT---G-----AATAT-A----T-T----T---TT------A---A----AT---G--CACGT-----A---GAAA-TGTAATATTGGAA--ATTGA-A---CTT-TATGTA---T-----------ACA--TGAACCTGT---AT-AG-ATCAT------CTTG-----GA-GA--TTG-AGT--TGTC----TTTG------A-AAT--A--TA-----ATAT-----T---CAACT------tttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATGTA---C-----------ATA--TA------T---GT-CG-ATCAT------CTGG-----GA-GA--TTG-AGT--TATC----TTTG------A-ATT--A--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : -----ATA--------AT---T---C------AACT-----TCG------A-------CG-------------------------------TCT--TTA---A---A---ATAATATAT--ACAAATTCAGTG--TATT--------------GACTCGGAGCTAACGG--------TGT-----G-C---T----------GAGC-G-T-----------------CAAAATT---G-----AAC-TT-----T-C----T---CT------G---A-A--GT---A--CA-------------GAA-T-TTAACTTGG-A-GATTGA-G---CTT-TATTT-----------------TA--AA------T---GT-AT-ATTAT------CTTG-----GA-GAT-TTA-AAC--TT------TTTG------A-CATGAA--TA-------AT-----T---CAACT------T-----A-----GATATTT----A-A--T-------TT--------TGCA-------ATT-A-A-----AAT-T------------T---------ATAC
gi|4 : tttgttatcttaaatgtttatgcTTGAAC-TT--TCTCTGAAG-TA------C-------A---GA----ATTTAACTTGGAGA-----TTGAGCT----TT-----------------------------A----TT-TTAAA-------TG---TA--T----------------ATTATCTTGG-----AG--A--------T--T------TAA---------A------------------------C------------------------T----T-----------------TTTGA--CA---TGA-A-T------A---ATTCA--AC--TTAGAT-A--TTTA-AT----------TT---TGCAAT--TAA-A---------ATTTATACGTCAGCTGTGA----------G-----ATA--------ATGGTT---G------AACT-----T-GTTCATGA-------AG---------A---A-----A-T----A----------TA---A---A---T--ACATCT--A---GATCATCT--TGTA--------------GATT--GAAAT-------------TTC-----T-----T------TT-AAA-T-A-C-----------------A----AT---G-----TACATCA----T-T----CAACTTGG----A---A-A--AT---A--CACGTTTTAAA---GATA-TATTACCTTTA-A-GTTAGAGA---TTC-TTTGAA-----------------A--CA------C---AT-AA-TTCAA------CTTG-----GA-AA--TTG-ATT--TAAT----TTTC------ACAAT--A--TATATACACA-----------AGCC------T-----A-----GGGATGT----A-A--C-------TT--------T----------TT----A-----AAT-A------------T---------AT----AA--T-------------------TCA--AATTAGAGATTAA--A----CTGT------------T--TTTATT---T---CTgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaaACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG----TT-T------T------------------------------AAA-------GA---TA--T----------------ATTACCTTT--------------AAG--T--TAG-AGAT------------------------------------------------------------------TC----------------TTTGA--AA---CAC-A-T------A---ATTCA--AC--TTGGAA-A--TT-G-AT----------TTAATT----T--TCACA---------AT----------------A----------T-----ATAT-------ACA--C---A------AGCC-----T-A------G-------GG---------A---T-----G-T----AAC--TTT--TTA---A---A-------TATAT--A---ATTCAAAT--TAGA--------------GATT--AAACTGTTTTTATTTCTTTTT-----T-T---C------TT-AGA-T-A-TATACATATCTATATCATC----TT---G-----GAGAATAAAGGT-T----T---T----------------AT---G--TAT-------A---GTCA-ATTCAATTTGG-A-GATTGA-A---CTT-CCTTTAAAAT-----------ACA--TA----------AT-AG-A--A-------CTTG-----GA-GG--T-G-AA-----------TTTT------A-AAT--A--GA-----TAAT-----T---TTACT------T-----G-----AAGATTG----ACA--T-------TT--------T----------TT----A-----AAT-A------------T---------ATATATAA--T-------------------TCA--TTTAAAAGACTGA--C----CT-------------AT--T-TCTT---T---TTAAAttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTAT------TT-C---TT-----TT-----T----TTCTTAGA-------TA---TA--TACATA------TCTATATCATCTTGG-----AG--AATAAAGG-T--TTT-ATGTAT---------AGTCAATTCAATTTGGAGATTGAACT------------------------T----CC----------------TTTAA--AA---TAC-A-T------A---ATAGA--AC--TTGGAG-G--T--G-AA----------TT---T----T----A-A---------AT----------------A----------G-----ATA--------AT---T---T------TACT-----T-G------A-------AG---------A---T-----T-G----A-CATTTT--TTA---A---AT--AT-ATATAT--A---ATTCATTT--AAAA--------------GACT--GACCT-------------ATT-----T-C---T------TT-----------------------------------------------TTA-----------------------A---A-T--AT---A--CAC-------A---CGAC-GATTAAATTTGGA-GATTGG-T---TTT-CATGTA---T-----------ACC--CA------T---CT-GG-ATCAT------CTTG-----GA-GA--TGG-AAT--TGTC----TTTG------A-AAT--A--TA-----ACAT-----T---TATCT------T------------AAAT------A-A--T-------AT--------T----------ACT-G-tatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT----TT-T------TTGC---TT-----TTTTCTTC----TT-CCAAA-------TA---TA--C---T-------TCTAGAACATCTTGG-----AG--AACGAAGG-T--TAT-ATGTAT---------A------------------------T------------------------T----TC----------------TTTGA--AA---TAC-A-T------A---ATTTA--AA--TTAGAG-A--T--G-AT----------TT---T----T--TCA-A---------AT----------------A----------G-----ATA--------AT---T---G------AACT-----T-G------A-------AG---------A---T-----T-T----T-C--TTT--TTA---A---A---A--ATATAT--A---ATTCAATT--TAAA--------------GACT--GAACT-------------TGT-----T-C---T------TT-AGA-TCA-T-----------------C----TT---G-----GATATTA----T-T----T---TT------G---A-T--AT---A--CAC-------A---GAAA-GGTAAACTTGGGA-GATCGA-A---TTT-TATGTA---T-----------GTA--TA------T---GT-AG-ATCAT------CTTT-----GA-AA--TTG-AAC--TATC----TTTG------A-AAT--A--TA-----GCGT-----T---TAACT------T-----G-----GAGATAA----A-A--T-------TT--------T----------ATT-G-A-----AAT-A------------T---------ATACA-AA--T--A---TCT--A-------TCG--CCTTGGAGACGGT--A----TTGT------ACA--AT--TATATT---T---TTAAAA-TTTAACATGATAAATAAA-A---GT----T------A----A-------ACTA--TAA-TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC-------------C--GGTTTGTA---A---TTAG-TAACACCTAA------TAA----AACACTTCCCAATCAGTAGGCTTATG--TAA-TTAACCGGGCTACATCTGACAC-AAA-CTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : -----ATA--------AT---T---G------AACT-----T-A------A-------AG---------A---T-----T-T----A-CA-TTT--TTGT--A---A---A--ATGTAT--A---ATTAAATT--TAAA--------------GACA--GAACG-------------TTT-----T-T---T------TT-AAA-T-A-TAAACA------------T----TT----------ATATCA----T-C----T---TT------AGAAA-T--ATGTTA--CAC-------A---GTAA-------------------------------ATGTA---C-----------ACAG-TAA-----T---GT-AA-A----------CTTG-----GT-GA--T-----C--TATG----T---------A-GAT-------------CAT------------CT------T-----G-----AGGATTG----A-A--C-------TT--------T----------CTTTG-A-----AAA-A------------T---------ATACA-AA--T--A---TCT--T-------TCA-----------------A----CTGT------GGA--ATATTATGTT---------ACAG-TTAAACATTCTCATTAAA-G---GT----T------A----ATTAAAGTA--A--AAT-TATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA-----ACAA--T--GGTTTGTA---A---ATAG-TAATCTCTACATTTACTAA----ATATCTTTTC-ATCAGTATGCTAATA--AAA-CGTTCCAGGCTACTTCTG-CAC-ATA-CTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaat----------------TTTGA--AT---TGC-A-T------AGC-ATT----AC--TTGTAT-A--TC-G-AC----------TT---T----T--T-A-A---------AT----------------A----------G-----ATA--------AA---T---G------AACT-----T-G------A-------AG---------A---C-----T-G----A-C--ATT--TCA---A---A---A--ATATAT--A---ATTCAGTT--TAAG--------------GATA--GAAC------------------------------------------T-A-T-------------------------------------TTC----T-G----T---TT------A---AGC--AT---A--CAC-------T---TTAA-GATAATTTTG-----ATTT------TTT-TAAATA---T-----------AAA--CA----------GT-AATGTTAA------CTTG-----GA-TA--TTG-A------TT----TTTT------A-TAT--A--TAT----ACCT-----TAT-TAGAT------CATGTGG-----GATATTGTTCGA-C--T-------GT--------C----------TTT-G-A-----AAT-A------------T---------A-AC-------------------------------TCTT------T----A----CTAT------GAA--AT--AGTATT---T---T-ACTG-TTCAATATTCTAAATAAA-----------T------A----A-------A--ATAAAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA-----ACAA--C--GGTTTGTATTGAT--ATAG-TAGCCTTTAC------TAA----ATCTCTTTCC-ATTAGTATGCTTATG--TAA-TGTTCCGGCATACATGTGACAC-AAA-CTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA----TT-T------TT-C---Tagtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgtt-AA--C--A---TTT--T-------TCT--GCTTAAAGACTGA--A----CTAT------GAA--AA--CTTGTT---T---TTACAG-CTAAACATTCTAAACAAA-----------T------A----A-------A--ACAAAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAAGC---A--T--C--AATTTGTA---A---ATTG-TAACTTTTGC------TTT----ATCACTTTCC-ATCAATATGCTTATA--AAAATATTTTGGACTACACTTGACAC-AAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg-ATGTTT---------A------------------------T------------------------T----TC----------------TTTGA--AACTATAT-A-C------A---AT--G--AC--TTGAAG-A--A--G-TT----------TT---T----C--TCC-A---------AT----------------A----------G-----ACA--------AT---T---G------AACT-----T-G------ATGACTGAAC---------A---T-----T-T----T-C--TTG--TTA---A---A---T--ATACAT--A---------TT--TAGA----------------------------------------------------------------A-T-A-T-----------------C----TT---A-----GATTTT-----T-T----T---TC------A---A-T--AT---G--CAC-------A---CACA-TGTAAACTTCA-A-GATTTA-A---TTT----------------------ATG--TA------T---CT-AG-ATCAT------CTTT-----GA-GA--TTA-AAC--TGTC----TTTG------A-AAT--A--TA-----GCAT-----T---TAA---------------------------------A--T-------TT----------------------------------------------------------ATACA-AA--T--A---CAT--A-------TCA--CCTTGGCGACTGA--A----CTGT------GAA--AT-----ATT---T-----AACA-TTTAACATTTTAAAGAAA-A---GT----T------A----G-------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA-----ACAA--C--GGTTTAAA---A---ATAT-TAACCTCTAC------TAA----ATCACTTTCC-ATCAGTATGCTTATT--TAA-TGTTCCGGGCTACAtttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Unaligned ( gi|27 ): TTTTTCTTACAGTACTTCAGAAACGAAACGACTTTGAAATCAAAACTAATAGGTTCAAAGAAAACACAAAATGACTTTCCCTTGTATGCATTTATATATTTGCACATATCTAGCAACTGCGCTTTGTTTGCATAATTCAACTAGGAGATTGTATCTTTATCT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111111111111111111 666666666666666666666666666666666666666666666666666666666666666 9999999999999999999999999999999999999999999999999999999999999999999999999 111111 2222222222222 1111111111111 111111111111111 2222222222222222222222222222222222222222222 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1111 11111111111111111111111111111 111111 222222222222222222222222 222222222222222222222222222222222222222222222222222 1111111111111111 111111111111111 111111 1111111111 5555555555555555555555555555555 2 1111111
lowQualScore : 0 1111 5 33 0 2 444444444444444444 6666 4 55555 33 44444 2 222222222222222222222222222222222222222222222222222222222222222 11 44 999999999 11 1111111111111111111111111111111111111111111111111111111111111111111111111 2 33 444 2 000000 777 5 33 33 2 2 4444444444444 33 3333333333333 77777777 222222222222222 666666666 7777777 7777777777777777777777777777777777777777777 444 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 1 6666 555 4 66666666666666666666666666666 55 2 000000 55555 44 1 22 1 6666 777777 22 000000000000000000000000 0 3333 0 6666 2 333 666666666666666666666666666666666666666666666666666 1 1111111111111111 11 111111111111111 4 000000 9999999999999 4 7777777777 2 3 8888888888888888888888888888888 3 3 3 77777 888 6 1 0 8888888 3 888888 3 6666 2 44 3 0 3 3 1111111 3 666 4 1 0
lowQualScore : . .... . .. . . .................. .... . ..... .. ..... . ............................................................... .. .. ......... .. ......................................................................... . .. ... . ...... ... . .. .. . . ............. .. ............. ........ ............... ......... ....... ........................................... ... ................................................................................................................................................................... . .... ... . ............................. .. . ...... ..... .. . .. . .... ...... .. ........................ . .... . .... . ... ................................................... . ................ .. ............... . ...... ............. . .......... . . ............................... . . . ..... ... . . . ....... . ...... . .... . .. . . . . ....... . ... . . .
lowQualScore : 8 1111 3 22 7 2 666666666666666666 9999 2 33333 88 99999 2 777777777777777777777777777777777777777777777777777777777777777 77 22 000000000 11 3333333333333333333333333333333333333333333333333333333333333333333333333 5 22 111 4 000000 444 5 22 22 4 4 8888888888888 22 5555555555555 33333333 444444444444444 333333333 2222222 4444444444444444444444444444444444444444444 111 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 3 1111 333 4 11111111111111111111111111111 11 1 555555 33333 55 9 66 7 0000 444444 66 444444444444444444444444 9 3333 4 2222 0 555 333333333333333333333333333333333333333333333333333 7 3333333333333333 88 666666666666666 6 999999 3333333333333 4 4444444444 1 3 8888888888888888888888888888888 6 6 3 77777 555 2 5 2 5555555 1 888888 1 5555 9 22 1 3 3 6 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT----TT-TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGA--TCATCTTGG-----AG--AACGAAG--T--TNTATGTAT---------A------------------------T------------------------T-TCTTTGA--AA---TAC-AT------A---ATTCA--AC--TTGGAG-A-T---G-AN-TT---TT--TCA-A---------ATA---G----ATA--------AT-TG--AACT-----T---GA-------AGAT-----T-T----A-C--TTT--T----T----A---AA---A-ATATAT---AATTCAATTTAGA--------------GAC------T--GAAC---T-----TNTT-C------------T--TT-AGA-T-AT-----C----TT--G--GANA---TT-A---TT----TTT------A---ATAT---ACAC--A---GNAA-N-GTNAACTTG-----GGAGATTGAA---TTT-TATGTAT-----------ATA--TA------T---GTAGAT-CAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAAT--A--TA--A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTG----A--A----CTGT------GAA--ATTATATT---TTTACA---------GTTNAACATTCTAAATA-AA-A---GT----TA----A-------A--AT-AAA-TATT-ATCCTG-TCTTATGTAT-----TTTGTTGTACCCATACAACAA---AC-AACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTATA--TAA-TGTTCCGGGCTACATCTGACAC-AAA-CTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT----TT-TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGA--TCATCTTGG-----AG--AACGAAG--T--TNTATGTAT---------A------------------------T------------------------T-TCTTTGA--AA---TAC-AT------A---ATTCA--AC--TTGGAG-A-T---G-AN-TT---TT--TCA-A---------ATA---G----ATA--------AT-TG--AACT-----T---GA-------AGAT-----T-T----A-C--TTT--T----T----A---AA---A-ATATAT---AATTCAATTTAGA--------------GAC------T--GAAC---T-----TNTT-C------------T--TT-AGA-T-AT-----C----TT--G--GANA---TT-A---TT----TTT------A---ATAT---ACAC--A---GNAA-N-GTNAACTTG-----GGAGATTGAA---TTT-TATGTAT-----------ATA--TA------T---GTAGAT-CAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAAT--A--TA--A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTG----A--A----CTGT------GAA--ATTATATT---TTTACA---------GTTNAACATTCTAAATA-AA-A---GT----TA----A-------A--A--AAA-TATT-ATCCTG-TCTTATGTAT-----TTTGTTGTACCCATACAACAA---AC-A-CGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTATA--TAA-TGTTCCGGGCTACATCTGACAC-AAA-CTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA----TT-TTT-----------------------TTC----AG---AAACTATATA---TA--C-A-------TATATA--GTATATTGACTCTAAGTTAACGATG--T--ACTGAGCATCAAAATTGAAC-----------------------T------------------------T-TCATTGA--AA---AGC-AC------A---ATTCA--AC--TTCGGG-A-T---TTAC-AT---TT--TCA-A---------ATATCTG----TTATCTGGGAGAT-T---AACTATCTGT---GA-------AGAA-----C-T----A-T--CAT--T----T----A---AATAGG-ATATAC---AATT----TTAAT--------------AAT------C--G------T-----TATA-C------------A--CC-AG-----------C----TC--GAGGAGA---AT-GGGCTT----TTT------A---ATGT---AGAT--A---ATAA-A--TAAA-TTA-----TTATAATAAA---GTT----ATAG-----------ATA--CA------T---CTAGAT-CCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGAT--A--CAG-A-------GAC-----TGGACTTGTGAG---C-A-G-TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTC----A--ACATTCTTT------GAA--ATC-CATT---ATT-CA---------GT
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA----GT-TGT------------------------------AA---A-------TAATGTA--C-A-------TGTGTA--TTATCTTGG------------------T--TAT-TCAAC---------A------------------------T------------------------T--CTTTGA--AA---TCC-AT------T---ATTCAGTAA--TCACAGTA-T---G-------------T-------------ACA---G----AGA--------AT--G--AACG-----T---GG-------CGAT-----T-T-----------T--T----T----A---AA---ATATA-AT---AATTCAACTAAGA--------------AAT------T--GAAC-----------------------------------A-T-AT-----T----TT------------TT-T---TT----TTT------AG--ATAT---TTAC--A---TCTA-G-GTCA-TTTT-----GGAAATTGAAGTTTTT-TAT-TAC-----------AT---TA------------AAAT-CAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAAT--AC-TA--A--------AT-----ATAACTTG-T-GGTGG-ACA-TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTG----A--A----CTGTTTTTAAAAA--GTGATA-T---TTTAC-----------TTGGAGATTCaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatTTT-A-A-TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTC----A--A----CTGT------TAG--ATATTATT---GTAACA----------TTTAACATTCTAAATA-AA-A---GT----TAGTCTA-------A--AT-AGACTATT-ATCATG-TCGTATGTAT-----TTTGCTGTACCCATACAACAA---CC-AACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGATA--TAA-TTTTCCGCGCTGCATCTGACAC-AAA-CTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGATaactttatttgaagta
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------G----A--A----CT-------------ATTAT------TCTGCA---------ATTAAACATCTTACATA-AA-GTTTAT----TA----T-------A--C--AAA-TCTTTAACCTG-TCTTATGTAT-----TTTCTTGTACCCATACAACAA---AA-AACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTATA--CAA-TGCTCCGAAATATATCTGACTC-AAA-C-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A-CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTG----A--A----CTAC------GAGGTATTAT------TTTACA---------GTTAGTCGTTCGAAAGA-AA-T---GTAAGATA----C-------A--ATTGAA-TATC-ATTCTG-TCTGTCGTAT-----TTTGT---AACCACAGAACAAC--AT-A-AGGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTACA--TAA-GGTT---------AT------------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GAGA---TT-T---TT----TTA------A---ATAT---ACAC--T---GAAA-T-GTTA----------------TGAT---TTT-TAT------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAA--A--TA--A-------CAT-----TTAATTTG-AAGATTGTA-C-TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA--TA---TC------ATCTTGTAGAACA----A--A----CTGT------AAA--TTTTTATT---TT-ACA---------GTGAAACCTTCTGAATA-GA-A---GT----TA----ATTAAAA-G--A--AAA-CATT-ATCCTG-TCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-A-CTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT----TT-TTT-CTTATTCATT------C----TTTC----AA---ATT-----TA---TA--C-T-------TCTAGA--TCATCTTGA-----TA--AACGAAA--T--TA-ATATA----------A------------------------TTTGGAGA-----------------T-TATTTGACCAA---TAG-TT------A---ATTGA--AC----GGAA-A-T-----AC-TT---TTTATCA-A---------AT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT----TT-TTT-TCGATA--TA------CATAGTTTT----AG---A-------TA---TAAAC-T-------TCAAAG--TCATCTTGG-----AA--AATTAAGATT--TGTATTTAT---------A------------------------TTTAATTCAGTTTGGAGATTGAACTT-TCTCTGA--AA---CTC-AT------ATTTATTTA---C--TTTGAA-A-T---A-AAATG---TT--TGA-C---------ATT---A----ATA--------AT-TG--AAAT-----T---GA-------AAAT-----T---------------------------------------ATAT---AATCCAATTTAAA--------------GAC------T--GCAT---A-----TTTA-CACA---------T--TT-AGA-TAAT-----C----TT--G--GAGA----T-A---TT----TTT------A---Acttctaatgacctttt
gi|2 : gtAC-GT--TCTTTGAAA-TA------C-------C---TA----ATTCAACTTCGAGA-----TTTGACT----TT-Ta
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaac------------------------T-TCTTTGA--AA---TAC-CT------A---ATTCA--AC--TTCGAG-A-TTT-G-AC-TT---TT----A-G---------ATC---T----ATG---------T-TA--GA-T-----G---GG-------ATAT-----T-A----A-T--CTT--C----T----GT--GA---A-ATATAT------TCAGCTTAGT--------------TAT------T--CAAT---A-----TACA-CA-----------T--TT-AGA-TCATG----T----TT--G--GAGA---TT-----TT----GTT------A---ATAT---AAAC--A---GTAA-GCGT----TTG-----T---ATTGAT---TTTGTGTGTGT-----------TTACCTA------T---GTATAT-CAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAAT--A---A--A-------CGTAGGCATTCTTTTA-AATATTT-A-A-TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATA----AAGA----TTGTTAA---GAAC-ATTGAATTCAACTTGGA---------GATGGACTTTTTAAATA-GATA---AT----TG----A-------A--agatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT----AT-TTT------------------------TC----AA---AATG----TA---TA--C-TAGTACTTTCTTGG--CCATCTTGG-----AG--AATAAAG-----------------------A------------------------T------------------------T-G--TTAA--GA----AC-ATTG----A---ATTCA--AC--TTGGAG-A-T---G-GA-CT---TT--TTA-A---------ATA---G----ATA--------AT-TG--AACT-----TTTAAA-------AG--------------A-C--TTT--T----TCAAAA---AA---A-AAATAT---AATTCAAACTAAG--------------GAC------A--AAACAATT-----TATT-TTAAATATACACAT--TT-AGA-TAATG----T----TT--G--GAGA---TT-----TT----GTT------A---ATAT---AAAC--C---GTAAGC-GT----TTG--------TATTG-A---TTT-TGTGTAT-----------GTT--TA------CTTAGTATAT-CAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAAT--A--AA--A-------CAT-----TTTACTTG-GAAGTTG-A-ACTT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTG----A--A----CTTT------GAA--A-TATTAT---TTTACA----------------ATTCTAAGCA-AA-T---G-------------------------AAA-TATT-ACCCTG-CCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTA-CGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTATA--TAA-TGTTCCGGGCTACATCT--CACTAAA-TTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAAT--A--C-----------CAT---------CTTG-GCGATTG-A-A-CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T----TT-TTT-TG------TT------C----TTTC----AA---A-------TA---TA--T-T-------TCTAGG--TCATCTAGA-----AG--AACGAAGT-T--TATATGTAT---------T------------------------T------------------------T-TCTTAGT--AA---TAC-AT------A---AT--A--------GGAG-A-T---G-AT-TT---TT--TT-----------------------------------T-CA--AACT-----T---GC-------AGAT-----T-T------T--GTT--T----T----A---Aactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTG-TATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGC-AATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTATA--TAA-TGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---AC-A-----------------ATAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCAA--TAA-T-TTCCGTGCTGCTTCCGACAC-AAA-CTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---AC-AATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTATA--TAT-TGTTC-GGACTACTTCTAACAC-AAA-CTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTCATGTAG---------T------------------------T------------------------TATCTTTGA--AA---AAC-AT------A---ATTCA--GT--TTGGA--------------T---TT--TCA-ACGTTGCTTTACA---GTTACACA--------GTATGCAAATT-----A---AA-------AGAT-----TGG----A-C--CTTTAT----T----T---AG---T-ATATAT---GATTCAACTTAGA--------------GA-------T--GGTG---T-----TGTT-C------------T--TT--------T-----CG---TT------------TT-G---TT----TTT------A---ATAT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT----TT-TCG-TT------TT------G----TTTT----TA---A-------TA---T---C-TTCA----TCTAGA--TCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaATTTAT-----------ATA--TT------T---GCACAT--AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------C--A--TA--A---------T-----TCAACTAG-GAGATTG-T-A-TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC----TT-TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaactgcgTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT----TT-TTT-TT------
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaaTTTCC-ATCCGTATGCTTATATATAA-TGTTCTGGGGCACATCTGGCAG-AAA-CGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTaaa
gi|3 : AAA--TTG-AAC--TTTC----TTTG------AAAT--A---A--A----------------TAACT-G-GTGATTG-A-A-CT---TT---T-------------------------------------------------ACAAA--TA---TAT--GTCATCTTGGAGATTA----A--AGTTTCTTT------GAA--A-TATA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaTTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT----TT-TA--------------------------C----AA---A-------TA---TA--T--------------G--TCATCTTGG-----AG--ATTAAAG------------------------------------------------T------------------------T-TCTTTGA--AA---TATAAT------A---ACTAA--AC--T---AG-G-T------T-TTATATT--TAA-A---------ATT---G----ATA--------CG-TC--AGTT-----C---GG-------AGATGATGAT-TCGGAA-A--TTT--T----C----ATGGAG---A-A-ATAT---AATTACATCTAGGCCATCGGGGCGATTGAG------T--GAA----------TATT-C------------T--TTGAGA-T-A------C----TT--G--TGTA---TA-A---TTCAACTTTCTTTCAA---ATAT---ATAC--ATCTGGAT-T-GTC----TA-----AGAGAACGAAGTCTTT-TATGTATATTTCTTTGAAATA--CA------T---GTACAT-AATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AAT--AGTTA--A-------TA--------AACTT-----AATG-A-C-TT---TT---T----------TT--A-----AAT-A------------T---------ATATAAataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT-------GGTGATTGAA---CTT-T-TACAA-----------ATA--TA------T---GT-----CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAAT--A--TA--A----------------TAACT----AAACTA-G-G-TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TG----ATGA----TTCG------GAA--ATTttcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AA---A-------TA---TATAC-A-------TCTGGA--TTGTCTAAG-----AG--AACGAAG--TCTTTTATGTAT---------A------------------------T------------------------T-TCTTTGA--AA---TAC-ATGTACATA---ATAGA--AAAATCGGAG-A-T---G-GG-GT---TT--TCC-A---------ATA---G----TTA--------AT--A--AACT-----T---AA-------TGAC-----T-T---------TTT--T----T----A---AA---T-ATATAT---AATTCAATTTAAA--------------GGC------T-----T---T-----TATTTC------------T--TC-AGA-TCAT-----C----TT--G--AATA---T--A---TT----TTT------A---A-AT---GCACGTA---GAAA-T-GTAATATTG-----GAA-ATTGAA---CTT-TATGTAT-----------ACA--TGAACCTGT---ATAGAT-CAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAAT--A--TA--A-------TAT-----TCAACTttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATGTAC-----------ATA--TA------T---GTCGAT-CAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATT--A--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : ----ATA--------AT-TC--AACT-----TC--GA-------CG-------------------TCT--T----T----A---AAAT-A-ATATATACAAATTCAGTGTATT--------------GAC------TCGGAGC---TAACGGTGTG-C------------T------GAGC-GT-----CAAAATT--G--AAC----TT-----TC----TCT------G---AAGT---ACA--------GAA-T--TTAACTT------GGAGATTGAG---CTT-TATTT--------------TA--AA------T---GTATAT-TAT------CTTG-----GAGAT-TTA-AAC--TT------TTTG------ACATGAA--TA-----------AT-----TCAACTTA-GATATTT-A-A-TT---TT---GCAA-------TTA-A-----AAT-T------------T---------ATAC
gi|4 : tttgttatcttaaatgtttatgcAAA-----TTGAACT----TT---------------------C----TCTG----AA---G-------TA---CA----------------GAATTTAACTTGG-----AG--ATTGA-G--C--TTTAT-------------------------------------------------------------------TTT-A--AA---TGT-AT------A-----TTA--TC--TTGGAG-A-TTTAA-AC-TT---TT--TGA-C---------ATG---A----ATA--------AT-TC--AACT-----T---AG-------ATAT-----T-T----A-A--TTT--TGCAAT----T---AA---A-ATTTAT---ACGTCAGCTGTGA--------------GATAATGGTT--GAAC---T-----TGTT-C------------A--T---GA-------------------A--GAAA---T-------------------------ATAA---ATAC--A---TCTA-G-ATCATCTTG-----T-AGATTGAAA--TTT-CTTTTAA-----------ATA--CAA-----T---GTACAT-CATTCAA--CTTG-----GAAA--ATA-CAC---GTT----TTAA------AGAT--A--TATTA-------CCT-----TTAAGTTA-GAGATT------------C---T----------TTG-A-----AAC-A------------C---------AT---AA--T----------TCAACTTGGAAATTGATTTA--A----TTTT------CAC--AATATATA---TACACAAGCCTAGGGATGTAACTTTTTAAATATAT-A---AT----TC----A-------A--ATTAGA-GATT-AAACTGTTTTTATTTCT-----TTTTTTgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtca------------------------T------------------------T-TCTCTGA--AG---TAC-AG------A---ATTTA--AC--TTGGAG-ATT---G-AG-CTTTATT--TTA-A---------ATG---T----AT---------AT-T---ATCT-----T---GG-------AGAT-----T-TAA--A-C--TTT--T----T--------GA---C-ATGAAT---AATTCAACTTAGA--------------TAT------T--TAAT---T-----TTGC-A------------A--TT-AAA---AT----------TT--A--TACG---TC-A---GC----TGT------G---AGAT---A-AT--G---GT------TGAACTTGTTCATGAAGA---A---------ATATAA-----------ATA--CA------T---CTAGAT-CAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAAT--A--CA--ATGTACATCAT-----TCAACTTG-GAAAATA-C-A-CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT-------------CTTT------GAA--Acttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG----TT-TT-------------------------------AA---A-------GA---TA--T--------------A--TTACCTTT--------------AAG--T--TAGAGAT---------------------------------------------------------------TCTTTGA--AA---CAC-AT------A---ATTCA--AC--TTGGAA-A-TT--G-AT-TTAATTT--TCACA---------ATA---T----ATAT-------ACACA--AGCC-----T---AG-------GGAT-----G-T----AAC--TTT--T----T----A---AA------TATAT---AATTCAAATTAGA--------------GAT------T--AAAC---T------GTT-T------------T--T----A-T-TT-----C----TT------------TT-T---TT----CTT------AGATATAT---ACAT--A---TCTA-T-ATCATCTTG-----G-AGAATAAAGG-TTT-TATGTAT-----------A----------------GTCAATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAAT--A--CA--T-------AAT-----AGAACTTG-GAGG-TG-A-A-TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTG----A--cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGAT---A-------TA---TA--CATA------TCTATA--TCATCTTGG-----AG--AATAAAGG-T--TTTATGTAT---------AGTCAATTCAATTTGGAGATTGAACT------------------------T-CCTTTAA--AA---TAC-AT------A---ATAGA--AC--TTGGAG-G-T---G-AA-TT---TT----A-A---------ATA---G----ATA--------AT-TT--TACT-----T---GA-------AGAT-----T-G----A-CATTTT--T----T----A---AAT--ATATATAT---AATTCATTTAAAA--------------GAC------T--GACC---T-----ATTT-C------------T--TT---------------------------------TT-A------------------A---ATAT---ACAC--A---CGAC-G-ATTAAATTT-----GGAGATTGGT---TTT-CATGTAT-----------ACC--CA------T---CTGGAT-CAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAAT--A--TA--A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT----TT-TTTGCT------TTTTTCTTC----TTCC----AA---A-------TA---TA--C-T-------TCTAGA--ACATCTTGG-----AG--AACGAAGG-T--TATATGTAT---------A------------------------T------------------------T-TCTTTGA--AA---TAC-AT------A---ATTTA--AA--TTAGAG-A-T---G-AT-TT---TT--TCA-A---------ATA---G----ATA--------AT-TG--AACT-----T---GA-------AGAT-----T-T----T-C--TTT--T----T----A---AA---A-ATATAT---AATTCAATTTAAA--------------GAC------T--GAAC---T-----TGTT-C------------T--TT-AGA-TCAT-----C----TT--G--GATA---TT-A---TT----TTT------G---ATAT---ACAC--A---GAAA-G-GTAAACTTG-----GGAGATCGAA---TTT-TATGTAT-----------GTA--TA------T---GTAGAT-CAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAAT--A--TA--G-------CGT-----TTAACTTG-GAGATAA-A-A-TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGG----T--A----TTGT------ACA--ATTATATT---TTTAAA---------ATTTAACATGATAAATA-AA-A---GT----TA----A-------ACTA--TAA-TATT-ATACTG-TCTTAGGCAT-----TTTGTTGTACCCGTAC-AC----------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTATG--TAA-TTAACCGGGCTACATCTGACAC-AAA-CTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : ----ATA--------AT-TG--AACT-----T---AA-------AGAT-----T-T----A-CA-TTT--T----T----GT--AA---A-ATGTAT---AATTAAATTTAAA--------------GAC------A--GAAC---G-----TTTT-T------------T--TT-AAA-T-ATAAACAT----TT------ATA---TC-A---TC----TTT------AGAAATATGTTACAC--A---GTAA-----------------------------------ATGTAC-----------ACAG-TAA-----T---GTAAA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT-----------------CAT---------CTTG-AGGATTG-A-A-CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTC-----------------A--A----CTGT------GGAATATTATG------TTACA---------GTTAAACATTCTCATTA-AA-G---GT----TA----ATTAAAGTA--A--AAT-TATT-ATCCTG-TCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAA-TGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAATA--AAA-CGTTCCAGGCTACTTCTG-CAC-ATA-CTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGA--AT---TGC-AT------AGC-ATT----AC--TTGTAT-A-TC--G-AC-TT---TT--T-A-A---------ATA---G----ATA--------AA-TG--AACT-----T---GA-------AGAC-----T-G----A-C--ATT--T----C----A---AA---A-ATATAT---AATTCAGTTTAAG--------------GAT------A--GAAC---T-----ATTT-C------------TGTTT-AAG-C-ATACA--C----TTTAA--GATAATTTTGA---TT----TTTTTA---A---ATAT---AAAC--A---GTAA-T-GTTAACTTG-----G-ATATTGAT---TTT-T-----T-----------ATA--TA------T---AT------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGAT--A--T-----------TGT-----TCGACT---------G----------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T--------A----CTAT------GAA--ATAGTATT---TT-ACT---------GTTCAATATTCTAAATA-AA-----------TA----A-------A--ATAAAA-TGGT-ACCCTG-TCTTATGCAT-----ATTGCTGTACCTATACAACAA---AC-AACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTATG--TAA-TGTTCCGGCATACATGTGACAC-AAA-CTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA----TT-TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTG----A--A----CTAT------GAA--AACTTGTT---TTTACA---------GCTAAACATTCTAAACA-AA-----------TA----A-------A--ACAAAA-TATT-ATCCTG-CCTTATGTAT-----TTTGTCGTACACCTACGATAA---GC-ATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATA--AAAATATTTTGGACTACACTTGACAC-AAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG-----------TTT-AT------TT------C----TTTG----AAACTA-------TA---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : ATGTTT---------A------------------------T------------------------T-TCTTTGA--AACTATAT-AC------A---AT--G--AC--TTGAAG-A-A---G-TT-TT---TC--TCC-A---------ATA---G----ACA--------AT-TG--AACT-----T---GATGACTGAACAT-----T-T----T-C--TTG--T----T----A---AA---T-ATACAT---A------TTTAGA-----------------------------------------------------------------A-T-AT-----C----TT--A--GATT---TT-----TT----TTC------A---ATAT---GCAC--A---CACA-T-GTAAACTTC-----A-AGATTTAA---TTT-------------------ATG--TA------T---CTAGAT-CAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAAT--A--TA--G-------CAT-----TTAA---------------A-TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTG----A--A----CTGT------GAA--AT---ATT---TA-ACA----------TTTAACATTTTAAAGA-AA-A---GT----TA----G-------------------TT-ATTCTG-TTTGATGTAT-----TTTGTTTTACCCACACAACAA---AC-AACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTATT--TAA-TGTTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Alignments
lowQualScore : 1111 111111111111111111 666666666666666666666666666666666666666666666666666666666666666 111111111 66666666666666666666666666666666666666666666666666666666666666666666666666666666 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 9999999999999999999999999999999999999999999999999999999999999999999999999 1111111111 4444444444444444444444444444444444444444444444444444444444444444444444444444 11111111111111111111111 11111111111 22222222222222 1111111111111111111111 1111111111111111 111111 11111111111 4444444444444444444444444444444444 1111111
lowQualScore : 0 1111 5 33 0 2 444444444444444444 6666 4 8888888888888888 2 000000000000000000000000000000000000000000000000000000000000000 1 111111111 11 44444444444444444444444444444444444444444444444444444444444444444444444444444444 33 444 2 777777 33 66 33 33 2 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 5555 33 999 99999 1111111111111111111111111111111111111111111111111111111111111111111111111 5555 5555555555 444 3 33 5555555555555555555555555555555555555555555555555555555555555555555555555555 55 2 666666 55555 33 2 33 1 6666 0 888888 77777777777777777777777 11111111111 2 444 44444444444444 55 55555 2 8888888888888888888888 0 2222222222222222 3 888888 5555 3 222222 66 44444444444 2 5 2 4444444444444444444444444444444444 4 88888 888 1 0 8888888 3 888888 3 6666 2 3 44 0 6 1111111 3 666 4 1 0
lowQualScore : . .... . .. . . .................. .... . ................ . ............................................................... . ......... .. ................................................................................ .. ... . ...... .. .. .. .. . ............................................................................................................................ .... .. ... ..... ......................................................................... .... .......... ... . .. ............................................................................ .. . ...... ..... .. . .. . .... . ...... ....................... ........... . ... .............. .. ..... . ...................... . ................ . ...... .... . ...... .. ........... . . . .................................. . ..... ... . . ....... . ...... . .... . . .. . . ....... . ... . . .
lowQualScore : 8 1111 3 22 7 2 666666666666666666 9999 2 0000000000000000 4 999999999999999999999999999999999999999999999999999999999999999 8 555555555 55 88888888888888888888888888888888888888888888888888888888888888888888888888888888 44 444 5 222222 44 44 44 44 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 3333 44 444 99999 8888888888888888888888888888888888888888888888888888888888888888888888888 3333 7777777777 777 0 99 5555555555555555555555555555555555555555555555555555555555555555555555555555 00 4 888888 99999 11 2 11 8 9999 1 666666 00000000000000000000000 11111111111 4 111 77777777777777 44 99999 4 2222222222222222222222 7 8888888888888888 0 333333 7777 2 333333 33 11111111111 4 9 2 0000000000000000000000000000000000 0 33333 555 4 2 5555555 1 888888 1 5555 9 1 22 3 7 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT----TT-TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAAG--T--TNT-ATGTAT---------A------------------------T-------T----TC----------------TTTGA--AA---TAC-AT------A--ATTCA--AC--TTGGAG-A--T--G-ACT---T---TT---TC--A-A---------ATA---G-----ATA--------AT-T-G--AACT-----TGA-------AG-------------AT-----T--T----A--C--TT----T--TTA---AA---A-ATATATAATTCAATTTAGA--------------GACTGAACTTNTT-C---T--TT-AGAT-AT-----C-TT--G--GANA---TT-A---TT----TTT------A---ATAT---ACAC--A---GNAA-CGTNAACTTG-----GGAGATTGAA---TTT-TATGTAT-----------ATA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT----TT-TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAAG--T--TNT-ATGTAT---------A------------------------T-------T----TC----------------TTTGA--AA---TAC-AT------A--ATTCA--AC--TTGGAG-A--T--G-ANT---T---TT---TC--A-A---------ATA---G-----ATA--------AT-T-G--AACT-----TGA-------AG-------------AT-----T--T----A--C--TT----T--TTA---AA---A-ATATATAATTCAATTTAGA--------------GACTGAACTTNTT-C---T--TT-AGAT-AT-----C-TT--G--GANA---TT-A---TT----TTT------A---ATAT---ACAC--A---GNAA-NGTNAACTTG-----GGAGATTGAA---TTT-TATGTAT-----------ATA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA----TT-TTT-----------------------TTC----AG---AAACTATATA---TA--C-A-------TATATAGTATATTGACTCTAAGTTAACGATG--T--ACT-GAGCATCAAAATTGAAC-----------------------T-------T----TC----------------ATTGA--AA---AGC-AC------A--ATTCA--AC--TTCGGG-A--T--TTACA---T---TT---TC--A-A---------ATATCTG-----TTATCTGGGAGAT-T----AACTATCTGTGA-------AG-------------AA-----C--T----A--T--CA----T--TTA---AATAGG-ATATACAATT----TTAAT--------------AATCG---TTATA-C---A--CC-AG----------C-TC--GAGGAGA---AT-GGGCTT----TTT------A---ATGT---AGAT--A---ATAA-A-TAAA-TTA-----TTATAATAAA---GTT----ATAG-----------ATA--CA------T---CTAGA-TCCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGATA--CAGA-------GAC-----TGGACTTGTGAG---C-A-G-TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTCA--ACATTCTTT------GAA--AT--C-CATT---ATT-CAGT
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA----GT-TGT------------------------------AA---A-------TAATGTA--C-A-------TGTGTATTATCTTGG------------------T--TAT--TCAAC---------A------------------------T-------T-----C----------------TTTGA--AA---TCC-AT------T--ATTCAGTAA--TCACAGTA--T--G----------------T---------------ACA---G-----AGA--------AT---G--AACG-----TGG-------CG-------------AT-----T--T----------------T--TTA---AA---ATATA-ATAATTCAACTAAGA--------------AATTGAAC------------------AT-AT-----T-TT------------TT-T---TT----TTT------AG--ATAT---TTAC--A---TCTA-GGTCA-TTTT-----GGAAATTGAAGTTTTT-TAT-TAC-----------AT---TA------------AAA-TCAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAATAC-TA-A--------AT-----ATAACTTG-T-GGTGG-ACA-TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTGA--A----CTGTTTTTAAAAA--GT--GATA-T---TTTAC--TTGGAGATTCaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatTTT-A-A-TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTCA--A----CTGT------TAG--AT--ATTATT---GTAACA-TTTAACATTCTAAATAAA-AGTT-----AGTCTA----AATA------GAC-TATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAA---CCAACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGAT-A--TAATTTTCCGCGCTGCATCTGACAC-AAACTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGATaactttatttgaagta
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------GA--A----CT-------------AT--TAT------TCTGCAATTAAACATCTTACATAAA-GTTT-----ATT--A----TACA------AA--TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA---AAAACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTAT-A--CAATGCTCCGAAATATATCTGACTC-AAAC-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A-CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTGA--A----CTAC------GAGGTAT--TAT------TTTACAGTTAGTCGTTCGAAAGAAA-TGT------A----A----GATACAATTGAA--TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAAC--ATAA-GGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTAC-A--TAAGGTT---------AT-----------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GAGA---TT-T---TT----TTA------A---ATAT---ACAC--T---GAAA-TGTTA----------------TGAT---TTT-TAT------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAAA--TA-A-------CAT-----TTAATTTG-AAGATTGTA-C-TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA---------T--ATCATCTTGTAGAACAA--A----CTGT------AAA--TT--TTTA-T---TTTACAGTGAAACCTTCTGAATAGA-AGTTAATTAA----A----AGAA------AA--CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-ACTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT----TT-TTT-CTTATTCATT------C----TTTC----AA---ATT-----TA---TA--C-T-------TCTAGATCATCTTGA-----TA--AACGAAA--T--TA--ATATA----------A------------------------TTTGGAGAT----TA----------------TTTGACCAA---TAG-TT------A--ATTGA--AC----GGAA-A--T----ACT---T---TTTA-TC--A-A---------AT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT----TT-TTT-TCGATA--TA------CATAGTTTT----AG---A-------TA---TAAAC-T-------TCAAAGTCATCTTGG-----AA--AATTAAGATT--TGT-ATTTAT---------A------------------------T-------T----T-----------------------------------------A--ATTCA--GT--TTGGAG-A--TTGA-ACT---T---TC---TCTGA-A---------ACT---C-----ATATTT-----AT-T-T--ACTT-----TGA-------AATAAAATGTTTGACAT-----TAAT----A--A--TTGAAAT--TGA---AA---A-TTATATAATCCAATTTAAA--------------GACTGCATATTTA-CACAT--TT-AGATAAT-----C-TT--G--GAGA----T-A---TT----TTT------A---Acttctaatgacctttt
gi|2 : gtAC-GT--TCTTTGAAA-TA------C-------C---TA----ATTCAACTTCGAGA-----TTTGACT----TT-Ta
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaac-------T----TC----------------TTTGA--AA---TAC-CT------A--ATTCA--AC--TTCGAG-ATTT--G-ACT---T---TT-------A-G---------ATC---T-----AT---------GT-T-A--GA-T-----GGG-------AT-------------AT-----T--A----A--T--CT----T--CTGT--GA---A-ATAT---ATTCAGCTTAGT--------------TATTCAATATACA-CA--T--TT-AGATCATG----T-TT--G--GAGA---TT-----TT----GTT------A---ATAT---AAAC--A---GTAAGCGT----TTG--------TATTGAT---TTTGTGTGTGT-----------TTACCTA------T---GTATA-TCAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAATA---A-A-------CGTAGGCATTCTTTTA-AATATTT-A-A-TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATAAAGA----TTGTTAA---GAAC-AT--TGAATTCAACTTGGAGATGGACTTTTTAAATAGATAATT-----G----A----Aagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT----AT-TTT------------------------TC----AA---AATG----TA---TA--C-TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAAGA-T--TGTTAAGAAC---------A------------------------T-------TGAATTCAACTTGGAGATGGACTTTTTA--AA---TAG-AT------A--ATTGA--AC--TTTTAA-A--A--G-ACT---T---TT---TC--A-A---------AAA---AAAAATATA--------AT-TCA--AACT-------A-------AGGACAAAACA----AT-----T--T----A--T--TT----T---------A---A-ATATACA---C-ATTTAGA------------------------------------T-A-AT-GT-------TT--G--GAGA---TT-----TT----GTT------A---ATAT---AAAC--C---GTAAGCGT----TTG--------TATTG-A---TTT-TGTGTAT-----------GTT--TA------CTTAGTATA-TCAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAATA--AA-A-------CAT-----TTTACTTG-GAAGTTG-A-ACTT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTGA--A----CTTT------GAA--A---TATTAT---TTTACA-------ATTCTAAGCAAA-TG--------------------A------AA--TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTACGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCT--CACTAAATTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAATA--C----------CAT---------CTTG-GCGATTG-A-A-CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T----TT-TTT-TG------TT------C----TTTC----AA---A-------TA---TA--T-T-------TCTAGGTCATCTAGA-----AG--AACGAAGT-T--TAT-ATGTAT---------T------------------------T-------T----TC----------------TTAGT--AA---TAC-AT------A--AT--A--------GGAG-A--T--G-ATT---T---TT---TT--------------------------------------T-C-A--AACT-----TGC-------AG-------------AT-----T--T-------T--GT----T--TTA---Aactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCAATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTAT-A--TAATGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---ACAA-----------------TAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCA-A--TAAT-TTCCGTGCTGCTTCCGACAC-AAACTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---ACAATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTAT-A--TATTGTTC-GGACTACTTCTAACAC-AAACTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTC-ATGTAG---------T------------------------T-------TA---TC----------------TTTGA--AA---AAC-AT------A--ATTCA--GT--TTGGA----------------T---TT---TC--A-ACGTTGCTTTACA---GTTAC-ACA--------GTAT-GCAAATT-----AAA-------AG-------------AT-----TG-G----A--C--CT----TTATTT---AG---T-ATATATGATTCAACTTAGA--------------GA-TGGTGTTGTT-C---T--TT-------T-----CGTT------------TT-G---TT----TTT------A---ATAT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT----TT-TCG-TT------TT------G----TTTT----TA---A-------TA---T---C-TTCA----TCTAGATCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaATTTAT-----------ATA--TT------T---GCACA-T-AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------CA--TA-A---------T-----TCAACTAG-GAGATTG-T-A-TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC----TT-TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaactgcgTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT----TT-TTT-TT------
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaaTTTCC-ATCCGTATGCTTAT-ATATAATGTTCTGGGGCACATCTGGCAG-AAACGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTaaa
gi|3 : TTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT----TT-TA--------------------------C----AA---A-------TA---TA--T--------------GTCATCTTGG-----AG--ATTAAAG-------------------------------------------------T-------T----TC----------------TTTGA--AA---TATAAT------A--ACTAA--AC--T---AG-G--T-----TT---TATATT---TA--A-A---------ATT---G-----ATA--------CG-T-C--AGTT-----CGG-------AG-------------ATGATGAT--TCGGAA--A--TT----T--TCATGGAG---A-A-ATATAATTACATCTAGGCCATCGGGGCGATTGAGTGAA--TATT-C---T--TTGAGAT-A------C-TT--G--TGTA---TA-A---TTCAACTTTCTTTCAA---ATAT---ATAC--ATCTGGAT-TGTC----TA-----AGAGAACGAAGTCTTT-TATGTATATTTCTTTGAAATA--CA------T---GTACA-TAATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AATAGTTA-A-------TA--------AACTT-----AATG-A-C-TT---TT---T----------TT--A-----AAT-A------------T---------ATATAA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT-------GGTGATTGAA---CTT-T-TACAA-----------ATA--TA------T---GT-----CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAATA--TA-A----------------TAACT----AAACTA-G-G-TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TGATGA----TTCG------GAA--AT--Tttcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AA---A-------TA---TATAC-A-------TCTGGATTGTCTAAG-----AG--AACGAAG--TCTTTT-ATGTAT---------A------------------------T-------T----TC----------------TTTGA--AA---TAC-ATGTACATA--ATAGA--AAAATCGGAG-A--T--G-GGG---T---TT---TC--C-A---------ATA---G-----TTA--------AT---A--AACT-----TAA-------TG-------------AC-----T--T----------TT----T--TTA---AA---T-ATATATAATTCAATTTAAA--------------GGCT---TTTATTTC---T--TC-AGATCAT-----C-TT--G--AATA---T--A---TT----TTT------A---A-AT---GCACGTA---GAAA-TGTAATATTG-----GAA-ATTGAA---CTT-TATGTAT-----------ACA--TGAACCTGT---ATAGA-TCAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAATA--TA-A-------TAT-----TCAACTttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATGTAC-----------ATA--TA------T---GTCGA-TCAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATTA--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : ------------------------T-------T----TC----------------TCTGA--AG---TAC-AG------A--ATTTA--AC--TTGGAG-A--TT-G-AGC---T---TTATTTT--A-A---------ATG---T-----ATA---------T-T----ATCT-----TGG-------AG-------------AT-----T--T----AAAC--TT----T--TTG---AC---A--TGAATAATTCAACTTAGA--------------TATTTAATTTTGC-A---A--TT-AAA--AT-------TT--A--TACG---TC-A---GC----TGT------G---AGAT---A-AT--G---GT-----TGAACTTGTTCATGAAGA----A--------ATATAA-----------ATA--CA------T---CTAGA-TCAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAATA--CA-ATGTACATCAT-----TCAACTTG-GAAAATA-C-A-CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT---------CTTT------GAA--A
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG----TT-TT-------------------------------AA---A-------GA---TA--T--------------ATTACCTTT--------------AAG--T--TAG-AGAT-------------------------------------------------TC----------------TTTGA--AA---CAC-AT------A--ATTCA--AC--TTGGAA-AT-T--G-ATTTAAT---TT---TC--ACA---------ATA---T-----ATAT-------ACAC-A--AGCC-----TAG-------GG-------------AT-----G--TA---A--C--TT----T--TT-----A---A-ATATATAATTCAAATTAGA--------------GATTAAAC-TGTT-T---T--T----AT-TT-----C-TT------------TT-T---TT----CTT------AGATATAT---ACAT--A---TCTA-TATCATCTT------GGAGAATAAAGG-TTT-TATGTAT-----------A----------------GTCAATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAATA--CA-T-------AAT-----AGAACTTG-GAGG-TG-A-A-TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTGA--cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGAT---A-------TA---TA--CATA------TCTATATCATCTTGG-----AG--AATAAAGG-T--TTT-ATGTAT---------AGTCAATTCAATTTGGAGATTGAACT-------T----CC----------------TTTAA--AA---TAC-AT------A--ATAGA--AC--TTGGAG-G--T--G-AAT---T---TT-------A-A---------ATA---G-----ATA--------AT-T-T--TACT-----TGA-------AG-------------AT-----T--G----A--CATTT----T--TTA---AAT--ATATATATAATTCATTTAAAA--------------GACTGACCTATTT-C---T--TT-----------------------------TT-A------------------A---ATAT---ACAC--A---CGAC-GATTAAATTT-----GGAGATTGGT---TTT-CATGTAT-----------ACC--CA------T---CTGGA-TCAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAATA--TA-A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT----TT-TTTGCT------TTTTTCTTC----TTCC----AA---A-------TA---TA--C-T-------TCTAGAACATCTTGG-----AG--AACGAAGG-T--TAT-ATGTAT---------A------------------------T-------T----TC----------------TTTGA--AA---TAC-AT------A--ATTTA--AA--TTAGAG-A--T--G-ATT---T---TT---TC--A-A---------ATA---G-----ATA--------AT-T-G--AACT-----TGA-------AG-------------AT-----T--T----T--C--TT----T--TTA---AA---A-ATATATAATTCAATTTAAA--------------GACTGAACTTGTT-C---T--TT-AGATCAT-----C-TT--G--GATA---TT-A---TT----TTT------G---ATAT---ACAC--A---GAAA-GGTAAACTTG-----GGAGATCGAA---TTT-TATGTAT-----------GTA--TA------T---GTAGA-TCAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAATA--TA-G-------CGT-----TTAACTTG-GAGATAA-A-A-TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGGT--A----TTGT------ACA--AT--TATATT---TTTAAAATTTAACATGATAAATAAA-AGTT-----A----A----ACTAT-----AA--TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC---------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTAT-G--TAATTAACCGGGCTACATCTGACAC-AAACTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : -----ATA--------AT-T-G--AACT-----TAA-------AG-------------AT-----T--T----A--CA-TT----T--TTGT--AA---A-ATGTATAATTAAATTTAAA--------------GACAGAACGTTTT-T---T--TT-AAAT-ATAAACAT-TT------ATA---TC-A---TC----TTT------AGAAATATGTTACAC--A---GTAA----------------------------------ATGTAC-----------ACAG-TAA-----T---GTAAA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT--------------CAT---------CTTG-AGGATTG-A-A-CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTCA---------------A----CTGT------GGA--ATATTATGTT------ACAGTTAAACATTCTCATTAAA-GGTT-----A----ATTAAAGTA------AAATTATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAATGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAAT-A--AAACGTTCCAGGCTACTTCTG-CAC-ATACTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaat----------------TTTGA--AT---TGC-AT------AGCATT----AC--TTGTAT-A--TC-G-ACT---T---TT---T---A-A---------ATA---G-----ATA--------AA-T-G--AACT-----TGA-------AG-------------AC-----T--G----A--C--AT----T--TCA---AA---A-ATATATAATTCAGTTTAAG--------------GATAGAACTATTT-C---TGTTT-AAGC-ATACA--C-TTTAA--GATAATTTTGA---TT----TTTTTA---A---ATAT---AAAC--A---GTAA-TGTTAACTTG-----G-ATATTGAT---TTT-T-----T-----------ATA--TA------T---AT------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGATA--T----------TGT-----TCGACT---------G----------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T----A----CTAT------GAA--AT--AGTATT---TT-ACTGTTCAATATTCTAAATAAA----T-----A----A----AATA------AAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA---ACAACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTAT-G--TAATGTTCCGGCATACATGTGACAC-AAACTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA----TT-TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTGA--A----CTAT------GAA--AA--CTTGTT---TTTACAGCTAAACATTCTAAACAAA----T-----A----A----AACA------AAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAA---GCATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATAA--AAATATTTTGGACTACACTTGACACAAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG-----------TTT-AT------TT------C----TTTG----AAACTA-------TA---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : -ATGTTT---------A------------------------T-------T----TC----------------TTTGA--AACTATAT-AC------A--AT--G--AC--TTGAAG-A--A--G-TTT---T---TC---TC--C-A---------ATA---G-----ACA--------AT-T-G--AACT-----TGATGACTGAAC-------------AT-----T--T----T--C--TT----G--TTA---AA---T-ATACATA------TTTAGA----------------------------------------AT-AT-----C-TT--A--GATT---TT-----TT----TTC------A---ATAT---GCAC--A---CACA-TGTAAACTTC-----A-AGATTTAA---TTT-------------------ATG--TA------T---CTAGA-TCAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAATA--TA-G-------CAT-----TTAA---------------A-TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTGA--A----CTGT------GAA--AT-----ATT---TA-ACA-TTTAACATTTTAAAGAAA-AGTT-----A----G--------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA---ACAACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-T--TAATGTTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111111111111111111 666666666666666666666666666666666666666666666666666666666666 111111111 333333333333333333333333333333333 111111 22222222222222222222222222222222222222222222222222222222222222222222 333333333333333333333333333333333 11111111 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111111111111 22222222222222 1111111111111111111111 1111111111111111 111111 11111111111 4444444444444444444444444444444444 1111111
lowQualScore : 0 1111 5 33 2 666666666666666666 7777 3 55555 33 2 5555 777777777777777777777777777777777777777777777777777777777777 1 111111111 11 3 555555555555555555555555555555555 2 33 4444 2 000000 33 2 33 0 2 44444444444444444444444444444444444444444444444444444444444444444444 777777777 7777777 444444444444444444444444444444444 5555 33 33333333 777777 444 0 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 55 2 666666 55555 55 2 22 1 6666 888888 22 77777777777777 7777777 99999999999 2 333 88888888888888 55 55555 2 6666666666666666666666 0 2222222222222222 3 888888 5555 3 222222 66 44444444444 2 5 2 4444444444444444444444444444444444 4 88888 888 1 0 8888888 3 888888 3 6666 2 3 44 0 6 1111111 3 666 4 1 0
lowQualScore : . .... . .. . .................. .... . ..... .. . .... ............................................................ . ......... .. . ................................. . .. .... . ...... .. . .. . . .................................................................... ......... ....... ................................. .... .. ........ ...... ... . .............................................................................................................................................................................................................................. .. . ...... ..... .. . .. . .... ...... .. .............. ....... ........... . ... .............. .. ..... . ...................... . ................ . ...... .... . ...... .. ........... . . . .................................. . ..... ... . . ....... . ...... . .... . . .. . . ....... . ... . . .
lowQualScore : 8 1111 3 44 4 555555555555555555 4444 5 99999 66 5 3333 222222222222222222222222222222222222222222222222222222222222 8 555555555 55 6 999999999999999999999999999999999 5 22 8888 4 000000 22 2 22 2 4 00000000000000000000000000000000000000000000000000000000000000000000 222222222 6666666 666666666666666666666666666666666 0000 22 33333333 111111 444 4 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11 2 444444 66666 00 1 99 7 6666 222222 99 66666666666666 9999999 00000000000 2 999 11111111111111 55 66666 2 7777777777777777777777 2 8888888888888888 0 333333 7777 2 333333 33 11111111111 4 9 2 0000000000000000000000000000000000 0 33333 555 4 2 5555555 1 888888 1 5555 9 1 22 3 7 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AAA-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTCAAC--TTGGAGA-T--G-A-C--T---T---T--T--TC--A-A---------ATA---G----ATA--------AT-TG--AACT-----T---GA-------AG-------------AT-----T--T----A--C-TT----T--TT----A---AA---A--ATATATA---ATTCAATTTAGA--------------GACT--GAAC---T-----TNTT-C------------T--TT-AGA-T-AT------------C----TT--G--GA---------TA---TT-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TG-TNAACTTG-----GGAGATTGAA---TTT-TATGTAT-----------ATA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAAT--A--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AAA-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTCAAC--TTGGAGA-T--G-A-C--T---T---T--T--TC--A-A---------ATA---G----ATA--------AT-TG--AACT-----T---GA-------AG-------------AT-----T--T----A--C-TT----T--TT----A---AA---A--ATATATA---ATTCAATTTAGA--------------GACT--GAAC---T-----TNTT-C------------T--TT-AGA-T-AT------------C----TT--G--GA---------NA---TT-A---TT----TTT------A---ATAT---ACAC--A---GNAA-CG-TNAACTTG-----GGAGATTGAA---TTT-TATGTAT-----------ATA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAAT--A--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA-TT----TTT-----------------------TTC----AGAAACTATATA---TA--C-A-------TATATAGTATATTGACTCTAAGTTAACGAT-G--T--ACTGAGCATCAAAATTGAACT-------T-TCATTGA--AA---AGC-AC------A--ATTCAAC--TTCGGGA-T--TTA-C--A---T---T--T--TC--A-A---------ATATCTG----TTATCTGGGAGAT-T---AACTATCTGT---GA-------AG-------------AA-----C--T----A--T-CA----T--TT----A---AATAGG--ATATACA---ATT----TTAAT--------------AATC--G------T-----TATA-C------------A--CC-AG------------------C----TC--GAGGA---------GA---AT-GGGCTT----TTT------A---ATGT---AGAT--A---ATAA--A-TAAA-TTA-----TTATAATAAA---GTT----ATAG-----------ATA--CA------T---CTAGA-TCCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGAT--A--CAGA-------GAC-----TGGACTTGTGAG---C-A-G-TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTCA--ACATTCTTT------GAA--AT--C-CATT---ATT-CAGT
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA-GT----TGT------------------------------AAA-------TAATGTA--C-A-------TGTGTATTATCTTGG-------------------T--TAT-TCAAC---------A-T-------T--CTTTGA--AA---TCC-AT------T--ATTCA-------GTAA-T--C-A-CAGT---A---T--G--T---------------ACA---G----AGA--------AT--G--AACG-----T---GG-------CG-------------AT-----T--T---------------T--TT----A---AA---AT-ATA-ATA---ATTCAACTAAGA--------------AATT--GAAC---A-----TATT-T------------T--TT-----T-TT------------T----TT--A--GA---------TA---TT-------------------------TAC---ATCT--A---G-----G-TCA-TTTT-----GGAAATTGAAGTTTTT-TAT-TAC-----------AT---TA------------AAA-TCAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAAT--AC-TA-A--------AT-----ATAACTTG-T-GGTGG-ACA-TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTGA--A----CTGTTTTTAAAAA--GT--GATA-T---TTTAC--TTGGAGATTCaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatTTT-A-A-TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTCA--A----CTGT------TAG--AT--ATTATT---GTAACA-TTTAACATTCTAAATAAA-AGTT-----AGTCTA----AATA------GAC-TATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAA---CCAACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGAT-A--TAATTTTCCGCGCTGCATCTGACAC-AAACTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGATaactttatttgaagta
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------GA--A----CT-------------AT--TAT------TCTGCAATTAAACATCTTACATAAA-GTTT-----ATT--A----TACA------AA--TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA---AAAACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTAT-A--CAATGCTCCGAAATATATCTGACTC-AAAC-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A-CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTGA--A----CTAC------GAGGTAT--TAT------TTTACAGTTAGTCGTTCGAAAGAAA-TGT------A----A----GATACAATTGAA--TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAAC--ATAA-GGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTAC-A--TAAGGTT---------AT-----------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GA---------GA---TT-T---TT----TTA------A---ATAT---ACAC--T---GAAA-TG-TTA----------------TGAT---TTT-TAT------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAA--A--TA-A-------CAT-----TTAATTTG-AAGATTGTA-C-TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA---------T--ATCATCTTGTAGAACAA--A----CTGT------AAA--TT--TTTA-T---TTTACAGTGAAACCTTCTGAATAGA-AGTTAATTAA----A----AGAA------AA--CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-ACTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT-TT----TTT-CTTATTCATT------C----TTTC----AAATT-----TA---TA--C-T-------TCTAGATCATCTTGA-----TA--AACGAA-A--T--TA-ATATA----------A-TTTGGAGAT-TATTTGACCAA---TAG-TT------A--ATTGAAC----GGAAA-T----A-C--T---T---T--TTATC--A-A---------AT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT-TT----TTT-TCGATA--TA------CATAGTTTT----AGA-------TA---TAAAC-T-------TCAAAGTCATCTTGG-----AA--AATTAA-GATT--TGTATTTAT---------A-T-------T-T-------------------------A--ATTCAGT--TTGGAGA-TTGA-A-C--T---T---T--C--TCTGA-A---------ACT---C----ATATTT-----AT-TT--ACTT-----T---GA-------AATAAAATGTTTGACAT-----TAAT----A--A-TTGAAAT--TG----A---AA---A--TTATATA---ATCCAATTTAAA--------------GACT--GCAT---A-----TTTA-CACA---------T--TT-AGA-TAAT------------C----TT--G--GA---------GA----T-A---TT----TTT------A---Acttctaatgacctttt
gi|2 : gtAC-GT--TCTTTGAAA-TA------C-------C---TA----ATTCAACTTCGAGA-----TTTGACT-TT----Ta
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaac-------T-TCTTTGA--AA---TAC-CT------A--ATTCAAC--TTCGAGA-TTTG-A-C--T---T---T--T------A-G---------ATC---T----ATG---------T-TA--GA-T-----G---GG-------AT-------------AT-----T--A----A--T-CT----T--CT----GT--GA---A--ATATAT------TCAGCTTAGT--------------TATT--CAAT---A-----TACA-CA-----------T--TT-AGA-TCATG-----------T----TT--G--GA---------GA---TT-----TT----GTT------A---ATAT---AAAC--A---GTAAGCG-T----TTG-----T---ATTGAT---TTTGTGTGTGT-----------TTACCTA------T---GTATA-TCAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAAT--A---A-A-------CGTAGGCATTCTTTTA-AATATTT-A-A-TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATAAAGA----TTGTTAA---GAAC-AT--TGAATTCAACTTGGAGATGGACTTTTTAAATAGATAATT-----G----A----Aagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT-AT----TTT------------------------TC----AAAATG----TA---TA--C-TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAA-G-----------------------A-T-------T-G--TTAA--GA----AC-ATTG----A--ATTCAAC--TTGGAGA-TG-G-A-C--T---T---T--T--T---A-A---------ATA---G----ATA--------AT-TG--AACT-----TTTAAA-------AG----------------------------A--C-TT----T--TTCAAAA---AA---A--AAATATA---ATTCAAACTAAG--------------GACA--AAACAATT-----TATT-TTAAATATACACAT--TT-AGA-TAATG-----------T----TT--G--GA---------GA---TT-----TT----GTT------A---ATAT---AAAC--C---GTAAGCG-T----TTG--------TATTG-A---TTT-TGTGTAT-----------GTT--TA------CTTAGTATA-TCAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAAT--A--AA-A-------CAT-----TTTACTTG-GAAGTTG-A-ACTT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTGA--A----CTTT------GAA--A---TATTAT---TTTACA-------ATTCTAAGCAAA-TG--------------------A------AA--TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTACGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCT--CACTAAATTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAAT--A--C----------CAT---------CTTG-GCGATTG-A-A-CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T-TT----TTT-TG------TT------C----TTTC----AAA-------TA---TA--T-T-------TCTAGGTCATCTAGA-----AG--AACGAA-GT-T--TATATGTAT---------T-T-------T-TCTTAGT--AA---TAC-AT------A--AT--A------GGAGA-T--G-A-T--T---T---T--T--TT-------------------------------------T-CA--AACT-----T---GC-------AG-------------AT-----T--T-------T-GT----T--TT----A---Aactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCAATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTAT-A--TAATGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---ACAA-----------------TAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCA-A--TAAT-TTCCGTGCTGCTTCCGACAC-AAACTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---ACAATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTAT-A--TATTGTTC-GGACTACTTCTAACAC-AAACTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTCATGTAG---------T-T-------TATCTTTGA--AA---AAC-AT------A--ATTCAGT--TTGGA-----------------T---T--T--TC--A-ACGTTGCTTTACA---GTTACACA--------GTATGCAAATT-----A---AA-------AG-------------AT-----TG-G----A--C-CT----TTATT----T---AG---T--ATATATG---ATTCAACTTAGA--------------GA-T--GGTG---T-----TGTT-C------------T--TT--------T------------CG---TT---------------------TT-G---TT----TTT------A---ATAT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT-TT----TCG-TT------TT------G----TTTT----TAA-------TA---T---C-TTCA----TCTAGATCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaATTTAT-----------ATA--TT------T---GCACA-T-AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------C--A--TA-A---------T-----TCAACTAG-GAGATTG-T-A-TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC-TT----TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaactgcgTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT-TT----TTT-TT------
gi|28 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaa-------T-TCTTTGA--G----TAC-AT------A--ATTCAAC--TTGGA------G-A-C--T---T---T--T--Taaa
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaattaaacgTTTCC-ATCCGTATGCTTAT-ATATAATGTTCTGGGGCACATCTGGCAG-AAACGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTtttaaa
gi|3 : TTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT-TT----TA--------------------------C----AAA-------TA---TA--T--------------GTCATCTTGG-----AG--ATTAAA-G-------------------------T-------T-TCTTTGA--AA---TATAAT------A--ACTAAAC--T---AGG-T------T--T---TATAT--T--TA--A-A---------ATT---G----ATA--------CG-TC--AGTT-----C---GG-------AG-------------ATGATGAT--TCGGAA--A-TT----T--TC----ATGGAG---A--A-ATATA---ATTACATCTAGGCCATCGGGGCGATTGAGT--GAA----------TATT-C------------T--TTGAGA-T-A-------------C----TT--G--TG---------TA---TA-A---TTCAACTTTCTTTCAA---ATAT---ATAC--ATCTGGAT-TG-TC----TA-----AGAGAACGAAGTCTTT-TATGTATATTTCTTTGAAATA--CA------T---GTACA-TAATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AAT--AGTTA-A-------TA--------AACTT-----AATG-A-C-TT---TT---T----------TT--A-----AAT-A------------T---------ATATAA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT-------GGTGATTGAA---CTT-T-TACAA-----------ATA--TA------T---GT-----CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAAT--A--TA-A----------------TAACT----AAACTA-G-G-TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TGATGA----TTCG------GAA--AT--Tttcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AAA-------TA---TATAC-A-------TCTGGATTGTCTAAG-----AG--AACGAA-G--TCTTTTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-ATGTACATA--ATAGAAAAATCGGAGA-T--G-G-G--G---T---T--T--TC--C-A---------ATA---G----TTA--------AT--A--AACT-----T---AA-------TG-------------AC-----T--T---------TT----T--TT----A---AA---T--ATATATA---ATTCAATTTAAA--------------GGCT-----T---T-----TATTTC------------T--TC-AGA-TCAT------------C----TT--G--AA---------TA---T--A---TT----TTT------A---A-AT---GCACGTA---GAAA-TG-TAATATTG-----GAA-ATTGAA---CTT-TATGTAT-----------ACA--TGAACCTGT---ATAGA-TCAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAAT--A--TA-A-------TAT-----TCAACTttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATGTAC-----------ATA--TA------T---GTCGA-TCAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATT--A--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : ----ATA--------AT-TC--AACT-----TC--GA-------CG---------------------------------TC----T--TT----A---AA---ATAATATATACAAATTCAGTGTATT--------------GACTCGGAGC---TAACGGTGTG-C------------T------GAGC-GT------------CAAAATT--G--AA---------C----TT-----TC----TCT------G---AAGT---ACA--------GAA-T--TTAACTTG-----G-AGATTGAG---CTT-TATTT--------------TA--AA------T---GTATA-TTAT------CTTG-----GAGAT-TTA-AAC--TT------TTTG------ACATGAA--TA----------AT-----TCAACTTA-GATATTT-A-A-TT---TT---GCAA-------TTA-A-----AAT-T------------T---------ATAC
gi|4 : tttgttatcttaaatgtttatgc-T-------T-TCTCTGA--AG---TAC-AG------A--ATTTAAC--TTGGAGA-TT-G-AGC--T---T---TATT--TT--A-A---------ATG---T----ATA---------T-T---ATCT-----T---GG-------AG-------------AT-----T--T----AAAC-TT----T--TT----G---AC---A---TGAATA---ATTCAACTTAGA--------------TATT--TAAT---T-----TTGC-A------------A--TT-AAA---AT-----------------TT--A--TA---------CG---TC-A---GC----TGT------G---AGAT---A-AT--G---GT------TGAACTTGTTCATGAAGA----A--------ATATAA-----------ATA--CA------T---CTAGA-TCAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAAT--A--CA-ATGTACATCAT-----TCAACTTG-GAAAATA-C-A-CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT---------CTTT------GAA--Agtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG-TT----TT-------------------------------AAA-------GA---TA--T--------------ATTACCTTT--------------AA-G--T--TAGAGAT-----------------------TCTTTGA--AA---CAC-AT------A--ATTCAAC--TTGGAAATT--G-A-T--TTAAT---T--T--TC--ACA---------ATA---T----ATAT-------ACACA--AGCC-----T---AG-------GG-------------AT-----G--TA---A--C-TT----T--TT---------A---A--ATATATA---ATTCAAATTAGA--------------GATT--AAAC---------TGTT-T------------T--T----A-T-TT------------C----TT---------------------TT-T---TT----CTT------AGATATAT---ACAT--A---TCTA-TA-TCATCTT------GGAGAATAAAGG-TTT-TATGTAT-----------A----------------GTCAATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAAT--A--CA-T-------AAT-----AGAACTTG-GAGG-TG-A-A-TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTGA--cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGATA-------TA---TA--CATA------TCTATATCATCTTGG-----AG--AATAAAGG--T--TTTATGTAT---------A-G-------T--------------------C------A--ATTCAAT--TTGGAGA-TTGA-A-C--T---TCC-T--T--TA--A-A---------ATA---C----ATA--------AT-AG--AACT-----T---GG-------AG-------------GT-----G--A----A--T-TT----T-------------A---A--ATAGATA---ATTTTACTTGAA--------------GATT--GA-----------CATT-T------------T--TT-AAA-T-ATATATATAATTCAT----TT--A--AAAGACTGACCTA---TT-T---CT----TTTTA----A---ATAT---ACAC--A----CGA-CGATTAAATTT-----GGAGATTGGT---TTT-CATGTAT-----------ACC--CA------T---CTGGA-TCAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAAT--A--TA-A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT-TT----TTTGCT------TTTTTCTTC----TTCC----AAA-------TA---TA--C-T-------TCTAGAACATCTTGG-----AG--AACGAA-GG-T--TATATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTTAAA--TTAGAGA-T--G-A-T--T---T---T--T--TC--A-A---------ATA---G----ATA--------AT-TG--AACT-----T---GA-------AG-------------AT-----T--T----T--C-TT----T--TT----A---AA---A--ATATATA---ATTCAATTTAAA--------------GACT--GAAC---T-----TGTT-C------------T--TT-AGA-TCAT------------C----TT--G--GA---------TA---TT-A---TT----TTT------G---ATAT---ACAC--A---GAAA-GG-TAAACTTG-----GGAGATCGAA---TTT-TATGTAT-----------GTA--TA------T---GTAGA-TCAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAAT--A--TA-G-------CGT-----TTAACTTG-GAGATAA-A-A-TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGGT--A----TTGT------ACA--AT--TATATT---TTTAAAATTTAACATGATAAATAAA-AGTT-----A----A----ACTAT-----AA--TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC---------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTAT-G--TAATTAACCGGGCTACATCTGACAC-AAACTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : ----ATA--------AT-TG--AACT-----T---AA-------AG-------------AT-----T--T----A--CATT----T--TT----GT--AA---A--ATGTATA---ATTAAATTTAAA--------------GACA--GAAC---G-----TTTT-T------------T--TT-AAA-T-ATAAACA-------T----TT------A---------TA---TC-A---TC----TTT------AGAAATATGTTACAC--A---GTAA-----------------------------------ATGTAC-----------ACAG-TAA-----T---GTAAA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT----------------CAT---------CTTG-AGGATTG-A-A-CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTCA---------------A----CTGT------GGA--ATATTATGTT------ACAGTTAAACATTCTCATTAAA-GGTT-----A----ATTAAAGTA------AAATTATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAATGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAAT-A--AAACGTTCCAGGCTACTTCTG-CAC-ATACTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGA--AT---TGC-AT------AGCATT--AC--TTGTATA-TC-G-A-C--T---T---T--T--T---A-A---------ATA---G----ATA--------AA-TG--AACT-----T---GA-------AG-------------AC-----T--G----A--C-AT----T--TC----A---AA---A--ATATATA---ATTCAGTTTAAG--------------GATA--GAAC---T-----ATTT-C------------TGTTT-AAG-C-ATACA---------C----TTTAA--GA---------TAATTTTGA---TT----TTTTTA---A---ATAT---AAAC--A---GTAA-TG-TTAACTTG-----G-ATATTGAT---TTT-T-----T-----------ATA--TA------T---AT------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGAT--A--T----------TGT-----TCGACT---------G----------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T----A----CTAT------GAA--AT--AGTATT---TT-ACTGTTCAATATTCTAAATAAA----T-----A----A----AATA------AAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA---ACAACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTAT-G--TAATGTTCCGGCATACATGTGACAC-AAACTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA-TT----TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTGA--A----CTAT------GAA--AA--CTTGTT---TTTACAGCTAAACATTCTAAACAAA----T-----A----A----AACA------AAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAA---GCATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATAA--AAATATTTTGGACTACACTTGACACAAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattgATGTTT---------A-T-------T-TCTTTGA--AACTATAT-AC------A--AT--GAC--TTGAAGA-A--G-T-T--T---T---T--C--TC--C-A---------ATA---G----ACA--------AT-TG--AACT-----T---GATGACTGAAC-------------AT-----T--T----T--C-TT----G--TT----A---AA---T--ATACATA---------TTTAGA-----------------------------------------------------------A-T-AT------------C----TT--A--GA---------TT---TT-----TT----TTC------A---ATAT---GCAC--A---CACA-TG-TAAACTTC-----A-AGATTTAA---TTT-------------------ATG--TA------T---CTAGA-TCAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAAT--A--TA-G-------CAT-----TTAA---------------A-TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTGA--A----CTGT------GAA--AT-----ATT---TA-ACA-TTTAACATTTTAAAGAAA-AGTT-----A----G--------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA---ACAACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-T--TAATGTTCCGGGCTACAtttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111111111111111111 666666666666666666666666666666666666666666666666666666666666666 111111111 333333333333333333333333333333333 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111 22222222222222 1111111111111111111111 1111111111111111 111111 11111111111 4444444444444444444444444444444444 1111111
lowQualScore : 0 1111 5 33 0 2 444444444444444444 6666 4 666666666 33 5555 000000000000000000000000000000000000000000000000000000000000000 1 111111111 11 3 555555555555555555555555555555555 2 33 4444 2 2 999999 33 1 33 0 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5555 33 33333333 55555 33 1 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 33 2 666666 55555 22 2 22 1 6666 888888 55555555555555 7777777 77777777777 2 333 55555555555555 44 55555 2 7777777777777777777777 0 2222222222222222 3 888888 5555 3 222222 66 44444444444 2 5 2 4444444444444444444444444444444444 4 88888 888 1 0 8888888 3 888888 3 6666 2 3 44 0 6 1111111 3 666 4 1 0
lowQualScore : . .... . .. . . .................. .... . ......... .. .... ............................................................... . ......... .. . ................................. . .. .... . . ...... .. . .. . ................................................................................................................................................. .... .. ........ ..... .. . ..................................................................................................................................................................................................................................... .. . ...... ..... .. . .. . .... ...... .............. ....... ........... . ... .............. .. ..... . ...................... . ................ . ...... .... . ...... .. ........... . . . .................................. . ..... ... . . ....... . ...... . .... . . .. . . ....... . ... . . .
lowQualScore : 8 1111 3 22 7 2 666666666666666666 9999 2 333333333 11 0000 999999999999999999999999999999999999999999999999999999999999999 8 555555555 55 6 555555555555555555555555555555555 4 11 0000 2 2 444444 11 5 11 5 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0000 22 33333333 22222 44 4 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77 2 444444 66666 99 1 99 7 6666 222222 22222222222222 2222222 66666666666 2 999 11111111111111 55 66666 2 6666666666666666666666 7 8888888888888888 0 333333 7777 2 333333 33 11111111111 4 9 2 0000000000000000000000000000000000 0 33333 555 4 2 5555555 1 888888 1 5555 9 1 22 3 7 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-T------A--ATTCAAC--TTGGAGA--T--G-A-C---------T---T---T--T--TC--A-A---------ATA----------G----ATA--------AT-T---G--AACT-----T---GA-------AG-------------AT-----T--T----A--C-TT----T--TT----A---AA---A-ATATAT--AATTCAACTTAGA--------------GACTGAAC---TTNTT-C------------T------TT-AGAT-AT-----C-TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-T------A--ATTCAAC--TTGGAGA--T--G-A-C---------T---T---T--T--TC--A-A---------ATA----------G----ATA--------AT-T---G--AACT-----T---GA-------AG-------------AT-----T--T----A--C-TT----T--TT----A---AA---A-ATATAT--AATTCAATTTAGA--------------GACTGAAC---TTNTT-C------------T------TT-AGAT-AT-----C-TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA-TT----TTT-----------------------TTC----AG---AAACTATATA---TA--C-A-------TATATAGTATATTGACTCTAAGTTAACGAT-G--T--ACTGAGCATCAAAATTGAACT-------T-TCATTGA--AA---AGC-A-C------A--ATTCAAC--TTCGGGA--T--TTA-C---------A---T---T--T--TC--A-A---------ATATCT-------G----TTATCTGGGAGAT-T------AACTATCTGT---GA-------AG-------------AA-----C--T----A--T-CA----T--TT----A---AATAGG-ATATAC--AATT----TTAAT--------------AATCG------TTATA-C------------A------CC-AG----------C-TC--GAGGAGA---A---------------------T-GGGCTT----TTT------A---ATGT---AGAT--A---ATAA--ATAAA-T-TATTA----TAATAAA---GTT------A------TAG-----------A--TA--CA------T---CTAGA-TCCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGATA--CAGA-------GAC-----TGGACTTGTGAG---C-A-G-TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTCA--ACATTCTTT------GAA--AT--C-CATT---ATT-CAGT
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA-GT----TGT------------------------------AA---A-------TAATGTA--C-A-------TGTGTATTATCTTGG-------------------T--TAT-TCAAC---------A-T-------T--CTTTGA--AA---TCC-A-T------T--ATTCA-------GTAA--T--C-A-CAG-------T---A---T--G--T---------------ACA----------G----AGA--------AT-----G--AACG-----T---GG-------CG-------------AT-----T--T---------------T--TT----A---AA---ATATA-AT--AATTCAACTAAGA--------------AATTGAAC---ATATT-T------------T------TT----T-TT-----T-TT--A--GATA---T---------------------T-------------------------TAC---ATCT--A---G-----GTCA-TT-TTGGA----AATTGAAGTTTTT---TAT-------TAC-----------A--T---TA------------AAA-TCAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAATAC-TA-A--------AT-----ATAACTTG-T-GGTGG-ACA-TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTGA--A----CTGTTTTTAAAAA--GT--GATA-T---TTTAC--TTGGAGATTCaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagat-------T-TTTTTAA--AA---TAT-AAT------A--ATTCAAC--TAAGAAA--TTGA-A-CATATTTTTTT---T---T--T--TT--A-G---------ATATTTACATCTAG----GTC--------AT-TTTGG--AAAT-----T---GA-------AG-------------------------------T-TT----T--TT----A---T-------TACATTAAAATCAACTTAGA--------------GATTAAAC---TTTAA-C------------TGAAATACT-AAAT-ATAA---C-TT--GT-GGTG---GA--------------------C-A---TT----TTT------A---TT-T---GGA--------TAA-T-TGAACT-TGA-A----CATTGAG---TTT------G------GAT-----------G--CC--TA------T---GTAGA-TCAT------CTGG-----GAGA--TTG-AAC--TGTT----TTTA------AAAAG--TG-A-------TAT-----TTTACTTG-GAGATTC-A-A-CT---TTA--T----------TTG-A-----AGT-A------------aactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatacatctagatcctcttggagattatattttctttgagatacagagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgaTTT-A-A-TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTCA--A----CTGT------TAG--AT--ATTATT---GTAACA-TTTAACATTCTAAATAAA-AGTT-----AGTCTA----AATA------GAC-TATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAA---CCAACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGAT-A--TAATTTTCCGCGCTGCATCTGACAC-AAACTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGAT
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------GA--A----CT-------------AT--TAT------TCTGCAATTAAACATCTTACATAAA-GTTT-----ATT--A----TACA------AA--TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA---AAAACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTAT-A--CAATGCTCCGAAATATATCTGACTC-AAAC-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A-CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTGA--A----CTAC------GAGGTAT--TAT------TTTACAGTTAGTCGTTCGAAAGAAA-TGT------A----A----GATACAATTGAA--TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAAC--ATAA-GGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTAC-A--TAAGGTT---------AT-----------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GAGA---T---------------------T-T---TT----TTA------A---ATAT---ACAC--T---GAAA-TGTTA----------------TGAT---TTT---TAT--------------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAAA--TA-A-------CAT-----TTAATTTG-AAGATTGTA-C-TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA---------T--ATCATCTTGTAGAACAA--A----CTGT------AAA--TT--TTTA-T---TTTACAGTGAAACCTTCTGAATAGA-AGTTAATTAA----A----AGAA------AA--CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-ACTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT-TT----TTT-CTTATTCATT------C----TTTC----AA---ATT-----TA---TA--C-T-------TCTAGATCATCTTGA-----TA--AACGAA-A--T--TA-ATATA----------A-TTTGGAGAT-TATTTGACCAA---TAG-T-T------A--ATTGAAC----GGAAA--T----A-C---------T---T---T--TTATC--A-A---------AT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT-TT----TTT-TCGATA--TA------CATAGTTTT----AG---A-------TA---TAAAC-T-------TCAAAGTCATCTTGG-----AA--AATTAA-GATT--TGTATTTAT---------A-T-------T-T--------------------------A--ATTCAGT--TTGGAGA--TTGA-A-C---------T---T---T--C--TCTGA-A---------ACT----------C----ATATTT-----AT-T---T--ACTT-----T---GA-------AATAAAATGTTTGACAT-----TAAT----A--A-TTGAAAT--TG----A---AA---A-TTATAT--AATCCAATTTAAA--------------GACTGCAT---ATTTA-CACA---------T------TT-AGATAAT-----C-TT--G--GAGA-------------------------T-A---TT----TTT------A---Acttctaatgacctttt
gi|2 : gtAC-GT--TCTTTGAAA-TA------C-------C---TA----ATTCAACTTCGAGA-----TTTGACT-TT----Ta
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaac-------T-TCTTTGA--AA---TAC-C-T------A--ATTCAAC--TTCGAGATTT--G-A-C---------T---T---T--T------A-G---------ATC----------T----AT---------GT-T---A--GA-T-----G---GG-------AT-------------AT-----T--A----A--T-CT----T--CT----GT--GA---A-ATAT-----ATTCAGCTTAGT--------------TATTCAAT---ATACA-CA-----------T------TT-AGATCATG----T-TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--A---GTAAGCGT----T-TG-------TATTGAT---TTTG--TGTG------TGT-----------T--TACCTA------T---GTATA-TCAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAATA---A-A-------CGTAGGCATTCTTTTA-AATATTT-A-A-TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATAAAGA----TTGTTAA---GAAC-AT--TGAATTCAACTTGGAGATGGACTTTTTAAATAGATAATT-----G----A----Aagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT-AT----TTT------------------------TC----AA---AATG----TA---TA--C-TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAA-G-----------------------A-T-------T-G--TTAA--GA----AC-A-TTG----A--ATTCAAC--TTGGAGA--TG-G-A-C---------T---T---T--T--T---A-A---------ATA----------G----ATA--------AT-T---G--AACT-----TTTAAA-------AG----------------------------A--C-TT----T--TTCAAAA---AA---A-AAATAT--AATTCAAACTAAG--------------GACAAAACAATTTATT-TTAAATATACACAT------TT-AGATAATG----T-TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--C---GTAAGCGT----T-TG-------TATTG-A---TTT---TGTG------TAT-----------G--TT--TA------CTTAGTATA-TCAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAATA--AA-A-------CAT-----TTTACTTG-GAAGTTG-A-ACTT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTGA--A----CTTT------GAA--A---TATTAT---TTTACA-------ATTCTAAGCAAA-TG--------------------A------AA--TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTACGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCT--CACTAAATTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAATA--C----------CAT---------CTTG-GCGATTG-A-A-CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T-TT----TTT-TG------TT------C----TTTC----AA---A-------TA---TA--T-T-------TCTAGGTCATCTAGA-----AG--AACGAA-GT-T--TATATGTAT---------T-T-------T-TCTTAGT--AA---TAC-A-T------A--AT--A------GGAGA--T--G-A-T---------T---T---T--T--TT--------------------------------------------T-C---A--AACT-----T---GC-------AG-------------AT-----T--T-------T-GT----T--TT----A---Aactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCAATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTAT-A--TAATGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---ACAA-----------------TAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCA-A--TAAT-TTCCGTGCTGCTTCCGACAC-AAACTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---ACAATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTAT-A--TATTGTTC-GGACTACTTCTAACAC-AAACTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTCATGTAG---------T-T-------TATCTTTGA--AA---AAC-A-T------A--ATTCAGT--TTGGA-------------------------T---T--T--TC--A-ACGTTGCTTTACA----------GTTACACA--------GTAT---GCAAATT-----A---AA-------AG-------------AT-----TG-G----A--C-CT----TTATT----T---AG---T-ATATAT--GATTCAACTTAGA--------------GA-TGGTG---TTGTT-C------------T------TT-------T-----CGTT------------T---------------------T-G---TT----TTT------A---ATAT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT-TT----TCG-TT------TT------G----TTTT----TA---A-------TA---T---C-TTCA----TCTAGATCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaATT------TAT-----------A--TA--TT------T---GCACA-T-AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------CA--TA-A---------T-----TCAACTAG-GAGATTG-T-A-TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC-TT----TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaactgcgTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT-TT----TTT-TT------
gi|28 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaa-------T-TCTTTGA--G----TAC-A-T------A--ATTCAAC--TTGGA-------G-A-C---------T---T---T--T--Taaa
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaattaaacgTTTCC-ATCCGTATGCTTAT-ATATAATGTTCTGGGGCACATCTGGCAG-AAACGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTtttaaa
gi|3 : TTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT-TT----TA--------------------------C----AA---A-------TA---TA--T--------------GTCATCTTGG-----AG--ATTAAA-G-------------------------T-------T-TCTTTGA--AA---TATAA-T------A--ACTAAAC--T---AGG--T------T---------T---TATAT--T--TA--A-A---------ATT----------G----ATA--------CG-T---C--AGTT-----C---GG-------AG-------------ATGATGAT--TCGGAA--A-TT----T--TC----ATGGAG---A-A-ATAT--AATTACATCTAGGCCATCGGGGCGATTGAGTGAA-----TATT-C------------T------TTGAGAT-A------C-TT--G--TGTA---T---------------------A-A---TTCAACTTTCTTTCAA---ATAT---ATAC--ATCTGGAT-TGTC-----TAAGA----GAACGAAGTCTTT---TATG------TATATTTCTTTGAAA--TA--CA------T---GTACA-TAATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AATAGTTA-A-------TA--------AACTT-----AATG-A-C-TT---TT---T----------TT--A-----AAT-A------------T---------ATATAA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT---GGT----GATTGAA---CTT---T-TA------CAA-----------A--TA--TA------T---GT-----CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAATA--TA-A----------------TAACT----AAACTA-G-G-TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TGATGA----TTCG------GAA--AT--Tttcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AA---A-------TA---TATAC-A-------TCTGGATTGTCTAAG-----AG--AACGAA-G--TCTTTTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-TGTACATA--ATAGAAAAATCGGAGA--T--G-G-G---------G---T---T--T--TC--C-A---------ATA----------G----TTA--------AT-----A--AACT-----T---AA-------TG-------------AC-----T--T---------TT----T--TT----A---AA---T-ATATAT--AATTCAATTTAAA--------------GGCT---T---TTATTTC------------T------TC-AGATCAT-----C-TT--G--AATA---T-----------------------A---TT----TTT------A---A-AT---GCACGTA---GAAA-TGTAATAT-TGGAA-----ATTGAA---CTT---TATG------TAT-----------A--CA--TGAACCTGT---ATAGA-TCAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAATA--TA-A-------TAT-----TCAACTttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATG------TAC-----------A--TA--TA------T---GTCGA-TCAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATTA--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : -T-------T-TCTCTGA--AG---TAC-A-G------A--ATTTAAC--TTGGAGA--TT-G-AGC---------T---T---TATT--TT--A-A---------ATG----------T----ATA---------T-T------ATCT-----T---GG-------AG-------------AT-----T--T----AAAC-TT----T--TT----G---AC---A--TGAAT--AATTCAACTTAGA--------------TA----------------------------T------TT-A----AT-----T-TT--G--CA-A---T---------------------T-A---A--------------A---ATTT---ATAC------------GTCAGCTGTGAGATAATGGTTGAA---CTTGTTCATGAAGAAATAT-----------AAATA--CA------T---CTAGA-TCAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAATA--CA-ATGTACATCAT-----TCAACTTG-GAAAATA-C-A-CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT---------CTTT------GAA--A
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG-TT----TT-------------------------------AA---A-------GA---TA--T--------------ATTACCTTT--------------AA-G--T--TAGAGAT-----------------------TCTTTGA--AA---CAC-A-T------A--ATTCAAC--TTGGAAAT-T--G-A-T---------TTAAT---T--T--TC--ACA---------ATA----------T----ATAT-------ACAC---A--AGCC-----T---AG-------GG-------------AT-----G--TA---A--C-TT----T--TT---------A---A-ATATAT--AATTCAAATTAGA--------------GATTAAAC----TGTT-T------------T------T----AT-TT-----C-TT------------T---------------------T-T---TT----CTT------AGATATAT---ACAT--A---TCTA-TATCATCT-T-GGA----GAATAAAGG-TTT---TATG------TAT-----------A------------------GTCAATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAATA--CA-T-------AAT-----AGAACTTG-GAGG-TG-A-A-TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTGA--cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGAT---A-------TA---TA--CATA------TCTATATCATCTTGG-----AG--AATAAAGG--T--TTTATGTAT---------A-G-------T---------------------C------A--ATTCAAT--TTGGAGA--TTGA-A-C---------T---TCC-T--T--TA--A-A---------ATA----------C----ATA--------AT-A---G--AACT-----T---GG-------AG-------------GT-----G--A----A--T-TT----T-------------A---A-ATAGAT--AATTTTACTTGAA--------------GATTGA------CATT-T------------T------TT-AAAT-AT-----A-T-------ATA---TAATTCATTTAAAAGACTGACCT-A---TT----TCTTTTTA-A---ATAT---ACAC--A---CGAC-GATTAAAT-TTGGA----GATTGGT---TTT---CATG------TAT-----------A--CC--CA------T---CTGGA-TCAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAATA--TA-A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT-TT----TTTGCT------TTTTTCTTC----TTCC----AA---A-------TA---TA--C-T-------TCTAGAACATCTTGG-----AG--AACGAA-GG-T--TATATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-T------A--ATTTAAA--TTAGAGA--T--G-A-T---------T---T---T--T--TC--A-A---------ATA----------G----ATA--------AT-T---G--AACT-----T---GA-------AG-------------AT-----T--T----T--C-TT----T--TT----A---AA---A-ATATAT--AATTCAATTTAAA--------------GACTGAAC---TTGTT-C------------T------TT-AGATCAT-----C-TT--G--GATA---T---------------------T-A---TT----TTT------G---ATAT---ACAC--A---GAAA-GGTAAACT-TGGGA----GATCGAA---TTT---TATG------TAT-----------G--TA--TA------T---GTAGA-TCAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAATA--TA-G-------CGT-----TTAACTTG-GAGATAA-A-A-TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGGT--A----TTGT------ACA--AT--TATATT---TTTAAAATTTAACATGATAAATAAA-AGTT-----A----A----ACTAT-----AA--TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC---------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTAT-G--TAATTAACCGGGCTACATCTGACAC-AAACTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : ----ATA--------AT-T---G--AACT-----T---AA-------AG-------------AT-----T--T----A--CATT----T--TT----GT--AA---A-ATGTAT--AATTAAATTTAAA--------------GACAGAAC---GTTTT-T------------T------TT-AAAT-ATAAACAT-TT------ATA---T---------------------C-A---TC----TTT------AGAAATATGTTACAC--A---GTAA------------------------------------ATG------TAC-----------A--CAG-TAA-----T---GTAAA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT--------------CAT---------CTTG-AGGATTG-A-A-CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTCA---------------A----CTGT------GGA--ATATTATGTT------ACAGTTAAACATTCTCATTAAA-GGTT-----A----ATTAAAGTA------AAATTATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAATGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAAT-A--AAACGTTCCAGGCTACTTCTG-CAC-ATACTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGA--AT---TGC-A-T------AGCATT--AC--TTGTATA--TC-G-A-C---------T---T---T--T--T---A-A---------ATA----------G----ATA--------AA-T---G--AACT-----T---GA-------AG-------------AC-----T--G----A--C-AT----T--TC----A---AA---A-ATATAT--AATTCAGTTTAAG--------------GATAGAAC---TATTT-C------------TGT----TT-AAGC-ATACA--C-TTTAA--GATAATTT---------------------TGA---TT----TTTTTA---A---ATAT---AAAC--A---GTAA-TGTTAACT-TGG-A----TATTGAT---TTT---T-----------T-----------A--TA--TA------T---AT------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGATA--T----------TGT-----TCGACT---------G----------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T----A----CTAT------GAA--AT--AGTATT---TT-ACTGTTCAATATTCTAAATAAA----T-----A----A----AATA------AAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA---ACAACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTAT-G--TAATGTTCCGGCATACATGTGACAC-AAACTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA-TT----TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTGA--A----CTAT------GAA--AA--CTTGTT---TTTACAGCTAAACATTCTAAACAAA----T-----A----A----AACA------AAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAA---GCATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATAA--AAATATTTTGGACTACACTTGACACAAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG-----------TTT-AT------TT------C----TTTG----AAACTA-------TA---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : ATGTTT---------A-T-------T-TCTTTGA--AACTATAT-A-C------A--AT--GAC--TTGAAGA--A--G-T-T---------T---T---T--C--TC--C-A---------ATA----------G----ACA--------AT-T---G--AACT-----T---GATGACTGAAC-------------AT-----T--T----T--C-TT----G--TT----A---AA---T-ATACAT--A------TTTAGA--------------------------------------------------------AT-AT-----C-TT--A--GATT---T---------------------T-----TT----TTC------A---ATAT---GCAC--A---CACA-TGTAAACT-TCA-A----GATTTAA---TTT---------------------------A--TG--TA------T---CTAGA-TCAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAATA--TA-G-------CAT-----TTAA---------------A-TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTGA--A----CTGT------GAA--AT-----ATT---TA-ACA-TTTAACATTTTAAAGAAA-AGTT-----A----G--------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA---ACAACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-T--TAATGTTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111111111111111111 666666666666666666666666666666666666666666666666666666666666666 111111111 333333333333333333333333333333333 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111 22222222222222 1111111111111111111111 1111111111111111 111111 11111111111 4444444444444444444444444444444444 1111111
lowQualScore : 0 1111 5 33 0 2 444444444444444444 6666 4 666666666 33 5555 000000000000000000000000000000000000000000000000000000000000000 1 111111111 11 3 555555555555555555555555555555555 2 33 4444 2 2 888888 22 1 2 22 55 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 4444 33 55555555 2 33 1 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 33 2 666666 55555 22 2 22 1 6666 888888 55555555555555 7777777 77777777777 2 333 55555555555555 44 55555 2 7777777777777777777777 0 2222222222222222 3 888888 5555 3 222222 66 44444444444 2 5 2 4444444444444444444444444444444444 4 88888 888 1 0 8888888 3 888888 3 6666 2 3 44 0 6 1111111 3 666 4 1 0
lowQualScore : . .... . .. . . .................. .... . ......... .. .... ............................................................... . ......... .. . ................................. . .. .... . . ...... .. . . .. .. ............................................................................................................................................. .... .. ........ . .. . ........................................................................................................................................................................................................................................... .. . ...... ..... .. . .. . .... ...... .............. ....... ........... . ... .............. .. ..... . ...................... . ................ . ...... .... . ...... .. ........... . . . .................................. . ..... ... . . ....... . ...... . .... . . .. . . ....... . ... . . .
lowQualScore : 8 1111 3 22 7 2 666666666666666666 9999 2 333333333 11 0000 999999999999999999999999999999999999999999999999999999999999999 8 555555555 55 6 555555555555555555555555555555555 4 11 0000 1 1 999999 99 7 1 99 00 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 7777 11 99999999 4 22 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 77 2 444444 66666 99 1 99 7 6666 222222 22222222222222 2222222 66666666666 2 999 11111111111111 55 66666 2 6666666666666666666666 7 8888888888888888 0 333333 7777 2 333333 33 11111111111 4 9 2 0000000000000000000000000000000000 0 33333 555 4 2 5555555 1 888888 1 5555 9 1 22 3 7 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-T------A--ATTCAA-C--TTGGAGA--T--G-A-C---------T---T---T--T--TC--A-A---------ATA----------G----ATA---AT-T---G--AAC----TT---GG-------AG-------------AT-----T-------T----A--C-TT----T--TT----A---AAA-ATATAT--AATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T------TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-T------A--ATTCAA-C--TTGGAGA--T--G-A-C---------T---T---T--T--TC--A-A---------ATA----------G----ATA---AT-T---G--AAC----TT---GA-------AG-------------AT-----T-------T----A--C-TT----T--TT----A---AAA-ATATAT--AATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T------TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA-TT----TTT-----------------------TTC----AG---AAACTATATA---TA--C-A-------TATATAGTATATTGACTCTAAGTTAACGAT-G--T--ACTGAGCATCAAAATTGAACT-------T-TCATTGA--AA---AGC-A-C------A--ATTCAA-C--TTCGGGA--T--TTA-C---------A---T---T--T--TC--A-A---------ATA----------T----CTG----T-T------ATC----TG---GG-------AG-------------AT-----T-------A----A--C-TA----T--CTGTG-A---AGA-AC-TAT--CATTTAAATAGGA--------------TATACAAT---TTTAATAAT-C------------G------TT-ATAC-AC-----CAGCTC--GAGGAGA---A---------------------T-GGGCTT----TTT------A---ATGT---AGAT--A---ATAA--ATAAA-T-TATTA----TAATAAA---GTT------A------TAG-----------A--TA--CA------T---CTAGA-TCCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGATA--CAGA-------GAC-----TGGACTTGTGAG---C-A-G-TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTCA--ACATTCTTT------GAA--AT--C-CATT---ATT-CAGT
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA-GT----TGT------------------------------AA---A-------TAATGTA--C-A-------TGTGTATTATCTTGG-------------------T--TAT-TCAAC---------A-T-------T--CTTTGA--AA---TCC-A-T------T--ATTCA--------GTAA--T--C-A-CAG-------T---A---T--G--T---------------ACA----------G----AGA---AT-----G--AAC----GT---GG-------CG-------------AT-----T-------T---------------T--TT----A---AAATATA-AT--AATTCAACTAAGA--------------AATTGAAC---ATA--T--T-T------------T------TT----T-TT-----T---TT--A--GATA---T---------------------T-------------------------TAC---ATCT--A---G-----GTCA-TT-TTGGA----AATTGAAGTTTTT---TAT-------TAC-----------A--T---TA------------AAA-TCAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAATAC-TA-A--------AT-----ATAACTTG-T-GGTGG-ACA-TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTGA--A----CTGTTTTTAAAAA--GT--GATA-T---TTTAC--TTGGAGATTCaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagat-------T-TTTTTAA--AA---TAT-AAT------A--ATTCAA-C--TAAGAAA--TTGA-A-CATATTTTTTT---T---T--T--TT--A-G---------ATATTTACATCTAG----GTC---AT-TTTGG--AAA----TT---GA-------AG------------------------------------T-TT----T--TT----A---T----TACATTAAAATCAACTTAGA--------------GATTAAAC---TTT--A--A-C------------TGAAATACT-AAAT-ATAA---C---TT--GT-GGTG---GA--------------------C-A---TT----TTT------A---TT-T---GGA--------TAA-T-TGAACT-TGA-A----CATTGAG---TTT------G------GAT-----------G--CC--TA------T---GTAGA-TCAT------CTGG-----GAGA--TTG-AAC--TGTT----TTTA------AAAAG--TG-A-------TAT-----TTTACTTG-GAGATTC-A-A-CT---TTA--T----------TTG-A-----AGT-A------------aactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatacatctagatcctcttggagattatattttctttgagatacagagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgaTTT-A-A-TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTCA--A----CTGT------TAG--AT--ATTATT---GTAACA-TTTAACATTCTAAATAAA-AGTT-----AGTCTA----AATA------GAC-TATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAA---CCAACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGAT-A--TAATTTTCCGCGCTGCATCTGACAC-AAACTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGAT
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------GA--A----CT-------------AT--TAT------TCTGCAATTAAACATCTTACATAAA-GTTT-----ATT--A----TACA------AA--TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA---AAAACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTAT-A--CAATGCTCCGAAATATATCTGACTC-AAAC-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A-CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTGA--A----CTAC------GAGGTAT--TAT------TTTACAGTTAGTCGTTCGAAAGAAA-TGT------A----A----GATACAATTGAA--TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAAC--ATAA-GGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTAC-A--TAAGGTT---------AT-----------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GAGA---T---------------------T-T---TT----TTA------A---ATAT---ACAC--T---GAAA-TGTTA----------------TGAT---TTT---TAT--------------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAAA--TA-A-------CAT-----TTAATTTG-AAGATTGTA-C-TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA---------T--ATCATCTTGTAGAACAA--A----CTGT------AAA--TT--TTTA-T---TTTACAGTGAAACCTTCTGAATAGA-AGTTAATTAA----A----AGAA------AA--CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-ACTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT-TT----TTT-CTTATTCATT------C----TTTC----AA---ATT-----TA---TA--C-T-------TCTAGATCATCTTGA-----TA--AACGAA-A--T--TA-ATATA----------A-TTTGGAGAT-TATTTGACCAA---TAG-T-T------A--ATTGAA-C----GGAAA--T----A-C---------T---T---T--TTATC--A-A---------AT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT-TT----TTT-TCGATA--TA------CATAGTTTT----AG---A-------TA---TAAAC-T-------TCAAAGTCATCTTGG-----AA--AATTAA-GATT--TGTATTTAT---------A-T-------T-T--------------------------A--ATTCAG-T--TTGGAGA--TTGA-A-C---------T---T---T--C--TCTGA-A---------ACT----------C----ATATTTAT-T---T--ACT----TT---GA-------AATAAAATGTTTGACAT-----TAA-----T----A--A-TTGAAAT--TG----A---AAA-TTATAT--AATCCAATTTAAA--------------GACTGCAT---ATT--T--A-CACA---------T------TT-AGATAAT-----C---TT--G--GAGA-------------------------T-A---TT----TTT------A---Acttctaatgacctttt
gi|2 : gtAC-GT--TCTTTGAAA-TA------C-------C---TA----ATTCAACTTCGAGA-----TTTGACT-TT----Ta
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaac-------T-TCTTTGA--AA---TAC-C-T------A--ATTCAA-C--TTCGAGATTT--G-A-C---------T---T---T--T------A-G---------ATC----------T----AT----GT-T---A--GA-----TG---GG-------AT-------------AT-----T-------A----A--T-CT----T--CT----GT--GAA-ATAT-----ATTCAGCTTAGT--------------TATTCAAT---ATA--C--A-CA-----------T------TT-AGATCATG----T---TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--A---GTAAGCGT----T-TG-------TATTGAT---TTTG--TGTG------TGT-----------T--TACCTA------T---GTATA-TCAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAATA---A-A-------CGTAGGCATTCTTTTA-AATATTT-A-A-TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATAAAGA----TTGTTAA---GAAC-AT--TGAATTCAACTTGGAGATGGACTTTTTAAATAGATAATT-----G----A----Aagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcattcttttaaatatttaattcaacttaaatattgaaatatttttcaaaatgtatactagtactttcttggccatcttggagaataaagattgttaagaacattgaattcaacttggagatggactttttaaatagataattgaacttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT-AT----TTT------------------------TC----AA---AATG----TA---TA--C-TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAA-G-----------------------A-T-------T-G--TTAA--GA----AC-A-TTG----A--ATTCAA-C--TTGGAGA--TG-G-A-C---------T---T---T--T--T---A-A---------ATA----------G----ATA---AT-T---G--AAC----TTTTAAA-------AG---------------------------------A--C-TT----T--TTCAAAA---AAA-AAATAT--AATTCAAACTAAG--------------GACAAAACAATTTA--T--T-TTAAATATACACAT------TT-AGATAATG----T---TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--C---GTAAGCGT----T-TG-------TATTG-A---TTT---TGTG------TAT-----------G--TT--TA------CTTAGTATA-TCAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAATA--AA-A-------CAT-----TTTACTTG-GAAGTTG-A-ACTT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTGA--A----CTTT------GAA--A---TATTAT---TTTACA-------ATTCTAAGCAAA-TG--------------------A------AA--TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTACGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCT--CACTAAATTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAATA--C----------CAT---------CTTG-GCGATTG-A-A-CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatC-A-G------A--ATTTGATC--ATGGAGA--T----A-C---------A---T---A--T--AG--A-A---------ATA----------------TA---GT-T---A--AACAGTCTT---GG-------AG-------------AT-----TGGTTGAGC----A--T-TT----T--TT----A---AAA--TGTAT--AATTCAACTTactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|21 : cagctcgtagatgaggggtTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T-TT----TTT-TG------TT------C----TTTC----AA---A-------TA---TA--T-T-------TCTAGGTCATCTAGA-----AG--AACGAA-GT-T--TATATGTAT---------T-T-------T-TCTTAGT--AA---TAC-A-T------A--AT--A-------GGAGA--T--G-A-T---------T---T---T--T--TT---------------------------------------T-C---A--AAC----TT---GC-------AG-------------AT-----T-------T-------T-GT----T--TT----A---Atttttttttgttctttcaaatatatttctaggtcatctagaagaacgaagtttatatgtatttttcttagtaatacataataggagatgattttttttcaaacttgcagattttgttttaa
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCAATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTAT-A--TAATGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---ACAA-----------------TAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCA-A--TAAT-TTCCGTGCTGCTTCCGACAC-AAACTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---ACAATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTAT-A--TATTGTTC-GGACTACTTCTAACAC-AAACTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTCATGTAG---------T-T-------TATCTTTGA--AA---AAC-A-T------A--ATTCAG-T--TTGGA-------------------------T---T--T--TC--A-ACGTTGCTTTACA----------GTTACACA---GTAT---GCAAAT----TA---AA-------AG-------------AT-----TG------G----A--C-CT----TTATT----T---AGT-ATATAT--GATTCAACTTAGA--------------GA-TGGTG---TTG--T--T-C------------T------TT-------T-----CG--TT------------T---------------------T-G---TT----TTT------A---ATAT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT-TT----TCG-TT------TT------G----TTTT----TA---A-------TA---T---C-TTCA----TCTAGATCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaATT------TAT-----------A--TA--TT------T---GCACA-T-AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------CA--TA-A---------T-----TCAACTAG-GAGATTG-T-A-TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC-TT----TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaactgcgTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT-TT----TTT-TT------
gi|28 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaa-------T-TCTTTGA--G----TAC-A-T------A--ATTCAA-C--TTGGA-------G-A-C---------T---T---T--T--Taaa
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaattaaacgTTTCC-ATCCGTATGCTTAT-ATATAATGTTCTGGGGCACATCTGGCAG-AAACGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTtttaaa
gi|3 : TTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT-TT----TA--------------------------C----AA---A-------TA---TA--T--------------GTCATCTTGG-----AG--ATTAAA-G-------------------------T-------T-TCTTTGA--AA---TATAA-T------A--ACTAAA-C--T---AGG--T------T---------T---TATAT--T--TA--A-A---------ATT----------G----ATA---CG-T---C--AGT----TC---GG-------AG-------------ATGATGAT-------TCGGAA--A-TT----T--TC----ATGGAGA-A-ATAT--AATTACATCTAGGCCATCGGGGCGATTGAGTGAA-----TA--T--T-C------------T------TTGAGAT-A------C---TT--G--TGTA---T---------------------A-A---TTCAACTTTCTTTCAA---ATAT---ATAC--ATCTGGAT-TGTC-----TAAGA----GAACGAAGTCTTT---TATG------TATATTTCTTTGAAA--TA--CA------T---GTACA-TAATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AATAGTTA-A-------TA--------AACTT-----AATG-A-C-TT---TT---T----------TT--A-----AAT-A------------T---------ATATAA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT---GGT----GATTGAA---CTT---T-TA------CAA-----------A--TA--TA------T---GT-----CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAATA--TA-A----------------TAACT----AAACTA-G-G-TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TGATGA----TTCG------GAA--AT--Tttcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AA---A-------TA---TATAC-A-------TCTGGATTGTCTAAG-----AG--AACGAA-G--TCTTTTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-TGTACATA--ATAGAA-AAATCGGAGA--T--G-G-G---------G---T---T--T--TC--C-A---------ATA----------G----TTA---AT-----A--AAC----TT---AA-------TG-------------AC-----T-------T---------TT----T--TT----A---AAT-ATATAT--AATTCAATTTAAA--------------GGCT---T---TTA--T--TTC------------T------TC-AGATCAT-----C---TT--G--AATA---T-----------------------A---TT----TTT------A---A-AT---GCACGTA---GAAA-TGTAATAT-TGGAA-----ATTGAA---CTT---TATG------TAT-----------A--CA--TGAACCTGT---ATAGA-TCAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAATA--TA-A-------TAT-----TCAACTttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATG------TAC-----------A--TA--TA------T---GTCGA-TCAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATTA--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : -T-------T-TCTCTGA--AG---TAC-A-G------A--ATTTAA-C--TTGGAGA--TT-G-AGC---------T---T---TATT--TT--A-A---------ATG----------T----ATA----T-T------ATC----TT---GG-------AG-------------AT-----T-------T----AAAC-TT----T--TT----G---ACA--TGAAT--AATTCAACTTAGA--------------TA--------------------------------T------TT-A----AT-----T---TT--G--CA-A---T---------------------T-A---A--------------A---ATTT---ATAC------------GTCAGCTGTGAGATAATGGTTGAA---CTTGTTCATGAAGAAATAT-----------AAATA--CA------T---CTAGA-TCAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAATA--CA-ATGTACATCAT-----TCAACTTG-GAAAATA-C-A-CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT---------CTTT------GAA--A
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG-TT----TT-------------------------------AA---A-------GA---TA--T--------------ATTACCTTT--------------AA-G--T--TAGAGAT-----------------------TCTTTGA--AA---CAC-A-T------A--ATTCAA-C--TTGGAAAT-T--G-A-T---------TTAAT---T--T--TC--ACA---------ATA----------T----ATAT--ACAC---A--AGC----CT---AG-------GG-------------AT-----G-------TA---A--C-TT----T--TT---------AA-ATATAT--AATTCAAATTAGA--------------GATTAAAC----TG--T--T-T------------T------T----AT-TT-----C---TT------------T---------------------T-T---TT----CTT------AGATATAT---ACAT--A---TCTA-TATCATCT-T-GGA----GAATAAAGG-TTT---TATG------TAT-----------A------------------GTCAATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAATA--CA-T-------AAT-----AGAACTTG-GAGG-TG-A-A-TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTGA--cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGAT---A-------TA---TA--CATA------TCTATATCATCTTGG-----AG--AATAAAGG--T--TTTATGTAT---------A-G-------T---------------------C------A--ATTCAA-T--TTGGAGA--TTGA-A-C---------T---TCC-T--T--TA--A-A---------ATA----------C----ATA---AT-A---G--AAC----TT---GG-------AG-------------GT-----G-------A----A--T-TT----T-------------AA-ATAGAT--AATTTTACTTGAA--------------GATTGA------CA--T--T-T------------T------TT-AAAT-AT-----A---T-------ATA---TAATTCATTTAAAAGACTGACCT-A---TT----TCTTTTTA-A---ATAT---ACAC--A---CGAC-GATTAAAT-TTGGA----GATTGGT---TTT---CATG------TAT-----------A--CC--CA------T---CTGGA-TCAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAATA--TA-A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT-TT----TTTGCT------TTTTTCTTC----TTCC----AA---A-------TA---TA--C-T-------TCTAGAACATCTTGG-----AG--AACGAA-GG-T--TATATGTAT---------A-T-------T-TCTTTGA--AA---TAC-A-T------A--ATTTAA-A--TTAGAGA--T--G-A-T---------T---T---T--T--TC--A-A---------ATA----------G----ATA---AT-T---G--AAC----TT---GA-------AG-------------AT-----T-------T----T--C-TT----T--TT----A---AAA-ATATAT--AATTCAATTTAAA--------------GACTGAAC---TTG--T--T-C------------T------TT-AGATCAT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------G---ATAT---ACAC--A---GAAA-GGTAAACT-TGGGA----GATCGAA---TTT---TATG------TAT-----------G--TA--TA------T---GTAGA-TCAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAATA--TA-G-------CGT-----TTAACTTG-GAGATAA-A-A-TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGGT--A----TTGT------ACA--AT--TATATT---TTTAAAATTTAACATGATAAATAAA-AGTT-----A----A----ACTAT-----AA--TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC---------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTAT-G--TAATTAACCGGGCTACATCTGACAC-AAACTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : ----ATA---AT-T---G--AAC----TT---AA-------AG-------------AT-----T-------T----A--CATT----T--TT----GT--AAA-ATGTAT--AATTAAATTTAAA--------------GACAGAAC---GTT--T--T-T------------T------TT-AAAT-ATAAACAT---TT------ATA---T---------------------C-A---TC----TTT------AGAAATATGTTACAC--A---GTAA------------------------------------ATG------TAC-----------A--CAG-TAA-----T---GTAAA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT--------------CAT---------CTTG-AGGATTG-A-A-CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTCA---------------A----CTGT------GGA--ATATTATGTT------ACAGTTAAACATTCTCATTAAA-GGTT-----A----ATTAAAGTA------AAATTATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAATGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAAT-A--AAACGTTCCAGGCTACTTCTG-CAC-ATACTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGA--AT---TGC-A-T------AGCATT--A-C--TTGTATA--TC-G-A-C---------T---T---T--T--T---A-A---------ATA----------G----ATA---AA-T---G--AAC----TT---GA-------AG-------------AC-----T-------G----A--C-AT----T--TC----A---AAA-ATATAT--AATTCAGTTTAAG--------------GATAGAAC---TAT--T--T-C------------TGT----TT-AAGC-ATACA--C---TTTAA--GATAATTT---------------------TGA---TT----TTTTTA---A---ATAT---AAAC--A---GTAA-TGTTAACT-TGG-A----TATTGAT---TTT---T-----------T-----------A--TA--TA------T---AT------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGATA--T----------TGT-----TCGACT---------G----------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T----A----CTAT------GAA--AT--AGTATT---TT-ACTGTTCAATATTCTAAATAAA----T-----A----A----AATA------AAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA---ACAACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTAT-G--TAATGTTCCGGCATACATGTGACAC-AAACTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA-TT----TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTGA--A----CTAT------GAA--AA--CTTGTT---TTTACAGCTAAACATTCTAAACAAA----T-----A----A----AACA------AAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAA---GCATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATAA--AAATATTTTGGACTACACTTGACACAAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG-----------TTT-AT------TT------C----TTTG----AAACTA-------TA---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : ATGTTT---------A-T-------T-TCTTTGA--AACTATAT-A-C------A--AT--GA-C--TTGAAGA--A--G-T-T---------T---T---T--C--TC--C-A---------ATA----------G----ACA---AT-T---G--AAC----TT---GATGACTGAAC-------------AT-----T-------T----T--C-TT----G--TT----A---AAT-ATACAT--A------TTTAGA------------------------------------------------------------AT-AT-----C---TT--A--GATT---T---------------------T-----TT----TTC------A---ATAT---GCAC--A---CACA-TGTAAACT-TCA-A----GATTTAA---TTT---------------------------A--TG--TA------T---CTAGA-TCAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAATA--TA-G-------CAT-----TTAA---------------A-TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTGA--A----CTGT------GAA--AT-----ATT---TA-ACA-TTTAACATTTTAAAGAAA-AGTT-----A----G--------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA---ACAACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-T--TAATGTTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 11111111111111 666666666666666666666666666666666666666666666666666666666666666 111111111 333333333333333333333333333333333 111111111111111111111111111111 1111111111111 2222222222222222222222222222222222222222 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111111111111111111111 11111111111 22222222222222 1111111111111111111111 1111111111111111 111111 11111111111 4444444444444444444444444444444444 1111111
lowQualScore : 0 1111 5 33 1 2 44444444444444 444 7777 3 7777777777777 5555 000000000000000000000000000000000000000000000000000000000000000 1 111111111 11 3 555555555555555555555555555555555 2 33 4444 2 999999 33 2 3333 88888888 55 999999999999999999999999999999 66 999999999999 33 5555 444 9999999999999 2 9999999999999999999999999999999999999999 2 1 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 55 2 666666 55555 33 2 33 1 6666 0 888888 77777777777777777777777 11111111111 2 444 44444444444444 55 55555 2 8888888888888888888888 0 2222222222222222 3 888888 5555 3 222222 66 44444444444 2 5 2 4444444444444444444444444444444444 4 88888 888 1 0 8888888 3 888888 3 6666 2 3 44 0 6 1111111 3 666 4 1 0
lowQualScore : . .... . .. . . .............. ... .... . ............. .... ............................................................... . ......... .. . ................................. . .. .... . ...... .. . .... ........ .. .............................. .. ............ .. .... ... ............. . ........................................ . . ....................................................................................................................................................................................................................................... .. . ...... ..... .. . .. . .... . ...... ....................... ........... . ... .............. .. ..... . ...................... . ................ . ...... .... . ...... .. ........... . . . .................................. . ..... ... . . ....... . ...... . .... . . .. . . ....... . ... . . .
lowQualScore : 8 1111 7 44 4 4 88888888888888 111 4444 5 2222222222222 3333 999999999999999999999999999999999999999999999999999999999999999 8 555555555 55 6 999999999999999999999999999999999 5 22 8888 2 444444 11 4 5555 11111111 33 000000000000000000000000000000 44 888888888888 22 0000 111 7777777777777 4 4444444444444444444444444444444444444444 5 7 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 00 4 888888 99999 11 2 11 8 9999 1 666666 00000000000000000000000 11111111111 4 111 77777777777777 44 99999 4 2222222222222222222222 7 8888888888888888 0 333333 7777 2 333333 33 11111111111 4 9 2 0000000000000000000000000000000000 0 33333 555 4 2 5555555 1 888888 1 5555 9 1 22 3 7 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTCAA-C--TTGGA--------GA--T--G-A-C--T---T---T---T--TC--A-AATAG-AT---A---AT-TGAA--C----TT---G-------------GAG-AT-----T-------T----A--C-TT----TTT----A---AAA-ATATATAATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T--TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTCAA-C--TTGGA--------GA--T--G-A-C--T---T---T---T--TC--A-AATAG-AT---A---AT-TGAA--C----TT---G-------------GAG-AT-----T-------T----A--C-TT----TTT----A---AAA-ATATATAATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T--TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA-TT----TTT-----------------------TTC----AG---AAACTATATA---TA--C-A-------TATATAGTATATTGACTCTAAGTTAACGAT-G--T--ACTGAGCATCAAAATTGAACT-------T-TCATTGA--AA---AGC-AC------A--ATTCAA-C--TTCGG--------GA--T--TTA-C--A---T---T---T--TC--A-AATAT-CT---G----T-T-AT--C----TG---G-------------GAG-AT-----T-------A----A--C-TA----TCTGTG-A---AGA-AC-TATCATTTAAATAGGA--------------TATACAAT---TTTAATAAT-C------------G--TT-ATAC-AC-----CAGCTC--GAGGAGA---A---------------------T-GGGCTT----TTT------A---ATGT---AGAT--A---ATAA--ATAAA-T-TATTA----TAATAAA---GTT------A------TAG-----------A--TA--CA------T---CTAGA-TCCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGATA--CAGA-------GAC-----TGGACTTGTGAG---C-A-G-TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTCA--ACATTCTTT------GAA--AT--C-CATT---ATT-CAGT
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA-GT----TGT------------------------------AA---A-------TAATGTA--C-A-------TGTGTATTATCTTGG-------------------T--TAT-TCAAC---------A-T-------T--CTTTGA--AA---TCC-AT------T--ATTCA--------GT--------AA--T--C-A-CAGT---A---T---G--T------ACAG-AG---A---AT--GAA--C----GT---G-------------GCG-AT-----T-------T---------------TTT----A---AAATATA-ATAATTCAACTAAGA--------------AATTGAAC---ATA--T--T-T------------T--TT----T-TT-----T---TT--A--GATA---T---------------------T-------------------------TAC---ATCT--A---G-----GTCA-TT-TTGGA----AATTGAAGTTTTT---TAT-------TAC-----------A--T---TA------------AAA-TCAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAATAC-TA-A--------AT-----ATAACTTG-T-GGTGG-ACA-TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTGA--A----CTGTTTTTAAAAA--GT--GATA-T---TTTAC--TTGGAGATTCaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatTTT-A-A-TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTCA--A----CTGT------TAG--AT--ATTATT---GTAACA-TTTAACATTCTAAATAAA-AGTT-----AGTCTA----AATA------GAC-TATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAA---CCAACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGAT-A--TAATTTTCCGCGCTGCATCTGACAC-AAACTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGATaactttatttgaagta
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------GA--A----CT-------------AT--TAT------TCTGCAATTAAACATCTTACATAAA-GTTT-----ATT--A----TACA------AA--TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA---AAAACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTAT-A--CAATGCTCCGAAATATATCTGACTC-AAAC-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A-CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTGA--A----CTAC------GAGGTAT--TAT------TTTACAGTTAGTCGTTCGAAAGAAA-TGT------A----A----GATACAATTGAA--TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAAC--ATAA-GGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTAC-A--TAAGGTT---------AT-----------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GAGA---T---------------------T-T---TT----TTA------A---ATAT---ACAC--T---GAAA-TGTTA----------------TGAT---TTT---TAT--------------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAAA--TA-A-------CAT-----TTAATTTG-AAGATTGTA-C-TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA---------T--ATCATCTTGTAGAACAA--A----CTGT------AAA--TT--TTTA-T---TTTACAGTGAAACCTTCTGAATAGA-AGTTAATTAA----A----AGAA------AA--CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-ACTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT-TT----TTT-CTTATTCATT------C----TTTC----AA---ATT-----TA---TA--C-T-------TCTAGATCATCTTGA-----TA--AACGAA-A--T--TA-ATATA----------A-TTTGGAGAT-TATTTGACCAA---TAG-TT------A--ATTGAA-C----GGA--------AA--T----A-C--T---T---T---TTATC--A-AAT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT-TT----TTT-TCGATA--TA------CATAGTTTT----AG---A-------TA---TAAAC-T-------TCAAAGTCATCTTGG-----AA--AATTAA-GATT--TGTATTTAT---------A-T-------T-T-------------------------A--ATTCAG-T--TTGGA--------GA--TTGA-A-C--T---T---T---C--TCTGA-AACTC-AT---ATTTAT-TTAC--T----TT---GAAATAAAATGTTTGAC-AT-----TAA-----T----A--A-TTGAAATTG----A---AAA-TTATATAATCCAATTTAAA--------------GACTGCAT---ATT--T--A-CACA---------T--TT-AGATAAT-----C---TT--G--GAGA-------------------------T-A---TT----TTT------A---Acttctaatgacctttt
gi|2 : gt-------T-TCTTTGA--AA---TAC-CT------A--ATTCAA-C--TTCGA--------GATTT--G-A-C--T---T---T---T------A-GATCT-AT-------GT-TAGA-------TG---G-------------GAT-AT-----T-------A----A--T-CT----TCT----GT--GAA-ATAT---ATTCAGCTTAGT--------------TATTCAAT---ATA--C--A-CA-----------T--TT-AGATCATG----T---TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--A---GTAAGCGT----T-TG-------TATTGAT---TTTG--TGTG------TGT-----------T--TACCTA------T---GTATA-TCAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAATA---A-A-------CGTAGGCATTCTTTTA-AATATTT-A-A-TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATAAAGA----TTGTTAA---GAAC-AT--TGAATTCAACTTGGAGATGGACTTTTTAAATAGATAATT-----G----A----Aa
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT-AT----TTT------------------------TC----AA---AATG----TA---TA--C-TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAA-G-----------------------A-T-------T-G--TTAA--GA----AC-ATTG----A--ATTCAA-C--TTGGA--------GA--TG-G-A-C--T---T---T---T--T---A-AATAG-AT---A---AT-TGAA--C----TTTTAA-------------AAG---------------------A--C-TT----TTTCAAAA---AAA-AAATATAATTCAAACTAAG--------------GACAAAACAATTTA--T--T-TTAAATATACACAT--TT-AGATAATG----T---TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--C---GTAAGCGT----T-TG-------TATTG-A---TTT---TGTG------TAT-----------G--TT--TA------CTTAGTATA-TCAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAATA--AA-A-------CAT-----TTTACTTG-GAAGTTG-A-ACTT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTGA--A----CTTT------GAA--A---TATTAT---TTTACA-------ATTCTAAGCAAA-TG--------------------A------AA--TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTACGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCT--CACTAAATTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAATA--C----------CAT---------CTTG-GCGATTG-A-A-CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatC-AG------A--ATTTGATC--ATGGA--------GA--T----A-C--A---T---A---T--AG--A-AATA---T---A---GT-TAAA--CAGTCTT---G-------------GAG-AT-----TGGTTGAGC----A--T-TT----TTT----A---AAA--TGTATAATTCAACTTactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|21 : cagctcgtagatgaggggtTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T-TT----TTT-TG------TT------C----TTTC----AA---A-------TA---TA--T-T-------TCTAGGTCATCTAGA-----AG--AACGAA-GT-T--TATATGTAT---------T-T-------T-TCTTAGT--AA---TAC-AT------A--AT--A-------GGA--------GA--T--G-A-T--T---T---T---T--TT--------------------T-CAAA--C----TT---G-------------CAG-AT-----T-------T-------T-GT----TTT----A---Atttttttttgttctttcaaatatatttctaggtcatctagaagaacgaagtttatatgtatttttcttagtaatacataataggagatgattttttttcaaacttgcagattttgttttaa
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCAATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTAT-A--TAATGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---ACAA-----------------TAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCA-A--TAAT-TTCCGTGCTGCTTCCGACAC-AAACTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---ACAATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTAT-A--TATTGTTC-GGACTACTTCTAACAC-AAACTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTCATGTAG---------T-T-------TATCTTTGA--AA---AAC-AT------A--ATTCAG-T--TTGGATTTTCAACGT--T--G---C--T---T---TACAG--TT--A-CACAGTATGCAA---AT-TAAAAGA----TT---G-------------GAC-CT-----T-------T----A--T-TT---------------AGT-ATATATGATTCAACTTAGA--------------GA-TGGTG---TTG--T--T-C------------T--TT-------T-----CG--TT------------T---------------------T-G---TT----TTT------A---ATAT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT-TT----TCG-TT------TT------G----TTTT----TA---A-------TA---T---C-TTCA----TCTAGATCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaATT------TAT-----------A--TA--TT------T---GCACA-T-AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------CA--TA-A---------T-----TCAACTAG-GAGATTG-T-A-TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC-TT----TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaactgcgTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT-TT----TTT-TT------
gi|28 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaa-------T-TCTTTGA--G----TAC-AT------A--ATTCAA-C--TTGGA---------------G-A-C--T---T---T---T--Taaa
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaattaaacgTTTCC-ATCCGTATGCTTAT-ATATAATGTTCTGGGGCACATCTGGCAG-AAACGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTtttaaa
gi|3 : TTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT-TT----TA--------------------------C----AA---A-------TA---TA--T--------------GTCATCTTGG-----AG--ATTAAA-G-------------------------T-------T-TCTTTGA--AA---TATAAT------A--ACTAAA-C--T---A--------GG--T------T--T---TATAT---T--TA--A-AATTG-AT---A---CG-TCAG--T----TC---G-------------GAG-ATGATGAT-------TCGGAA--A-TT----TTC----ATGGAGA-A-ATATAATTACATCTAGGCCATCGGGGCGATTGAGTGAA-----TA--T--T-C------------T--TTGAGAT-A------C---TT--G--TGTA---T---------------------A-A---TTCAACTTTCTTTCAA---ATAT---ATAC--ATCTGGAT-TGTC-----TAAGA----GAACGAAGTCTTT---TATG------TATATTTCTTTGAAA--TA--CA------T---GTACA-TAATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AATAGTTA-A-------TA--------AACTT-----AATG-A-C-TT---TT---T----------TT--A-----AAT-A------------T---------ATATAA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT---GGT----GATTGAA---CTT---T-TA------CAA-----------A--TA--TA------T---GT-----CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAATA--TA-A----------------TAACT----AAACTA-G-G-TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TGATGA----TTCG------GAA--AT--Tttcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AA---A-------TA---TATAC-A-------TCTGGATTGTCTAAG-----AG--AACGAA-G--TCTTTTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-ATGTACATA--ATAGAA-AAATCGGA--------GA--T--G-G-G--G---T---T---T--TC--C-AATAG-TT---A---AT--AAA--C----TT---A-------------ATG-AC-----T-------T---------TT----TTT----A---AAT-ATATATAATTCAATTTAAA--------------GGCT---T---TTA--T--TTC------------T--TC-AGATCAT-----C---TT--G--AATA---T-----------------------A---TT----TTT------A---A-AT---GCACGTA---GAAA-TGTAATAT-TGGAA-----ATTGAA---CTT---TATG------TAT-----------A--CA--TGAACCTGT---ATAGA-TCAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAATA--TA-A-------TAT-----TCAACTttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATG------TAC-----------A--TA--TA------T---GTCGA-TCAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATTA--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : -T-------T-TCTCTGA--AG---TAC-AG------A--ATTTAA-C--TTGGA--------GA--TT-G-AGC--T---T---TAT-T--TT--A-AATGT-AT---A----T-T-AT--C----TT---G-------------GAG-AT-----T-------T----AAAC-TT----TTT----G---ACA--TGAATAATTCAACTTAGA--------------TA--------------------------------T--TT-A----AT-----T---TT--G--CA-A---T---------------------T-A---A--------------A---ATTT---ATAC------------GTCAGCTGTGAGATAATGGTTGAA---CTTGTTCATGAAGAAATAT-----------AAATA--CA------T---CTAGA-TCAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAATA--CA-ATGTACATCAT-----TCAACTTG-GAAAATA-C-A-CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT---------CTTT------GAA--A
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG-TT----TT-------------------------------AA---A-------GA---TA--T--------------ATTACCTTT--------------AA-G--T--TAGAGAT-----------------------TCTTTGA--AA---CAC-AT------A--ATTCAA-C--TTGGA--------AAT-T--G-A-T--TTAAT---T---T--TC--ACAATAT-AT---AT--ACACAAG--C----CT---A-------------GGG-AT-----G-------TA---A--C-TT----TTT---------AA-ATATATAATTCAAATTAGA--------------GATTAAAC----TG--T--T-T------------T--T----AT-TT-----C---TT------------T---------------------T-T---TT----CTT------AGATATAT---ACAT--A---TCTA-TATCATCT-T-GGA----GAATAAAGG-TTT---TATG------TAT-----------A------------------GTCAATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAATA--CA-T-------AAT-----AGAACTTG-GAGG-TG-A-A-TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTGA--cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGAT---A-------TA---TA--CATA------TCTATATCATCTTGG-----AG--AATAAAGG--T--TTTATGTAT---------A-G-------T--------------------C------A--ATTCAA-T--TTGGA--------GA--TTGA-A-C--T---TCC-T---T--TA--A-AATAC-AT---A---AT-AGAA--C----TT---G-------------GAG-GT-----G-------A----A--T-TT----T-----------AA-ATAGATAATTTTACTTGAA--------------GATTGA------CA--T--T-T------------T--TT-AAAT-AT-----A---T-------ATA---TAATTCATTTAAAAGACTGACCT-A---TT----TCTTTTTA-A---ATAT---ACAC--A---CGAC-GATTAAAT-TTGGA----GATTGGT---TTT---CATG------TAT-----------A--CC--CA------T---CTGGA-TCAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAATA--TA-A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT-TT----TTTGCT------TTTTTCTTC----TTCC----AA---A-------TA---TA--C-T-------TCTAGAACATCTTGG-----AG--AACGAA-GG-T--TATATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTTAA-A--TTAGA--------GA--T--G-A-T--T---T---T---T--TC--A-AATAG-AT---A---AT-TGAA--C----TT---G-------------AAG-AT-----T-------T----T--C-TT----TTT----A---AAA-ATATATAATTCAATTTAAA--------------GACTGAAC---TTG--T--T-C------------T--TT-AGATCAT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------G---ATAT---ACAC--A---GAAA-GGTAAACT-TGGGA----GATCGAA---TTT---TATG------TAT-----------G--TA--TA------T---GTAGA-TCAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAATA--TA-G-------CGT-----TTAACTTG-GAGATAA-A-A-TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGGT--A----TTGT------ACA--AT--TATATT---TTTAAAATTTAACATGATAAATAAA-AGTT-----A----A----ACTAT-----AA--TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC---------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTAT-G--TAATTAACCGGGCTACATCTGACAC-AAACTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : -AT---A---AT-TGAA--C----TT---A-------------AAG-AT-----T-------T----A--CATT----TTT----GT--AAA-ATGTATAATTAAATTTAAA--------------GACAGAAC---GTT--T--T-T------------T--TT-AAAT-ATAAACAT---TT------ATA---T---------------------C-A---TC----TTT------AGAAATATGTTACAC--A---GTAA------------------------------------ATG------TAC-----------A--CAG-TAA-----T---GTAAA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT--------------CAT---------CTTG-AGGATTG-A-A-CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTCA---------------A----CTGT------GGA--ATATTATGTT------ACAGTTAAACATTCTCATTAAA-GGTT-----A----ATTAAAGTA------AAATTATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAATGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAAT-A--AAACGTTCCAGGCTACTTCTG-CAC-ATACTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGA--AT---TGC-AT------AGCATT--A-C--TTGTA--------TA--TC-G-A-C--T---T---T---T--T---A-AATAG-AT---A---AA-TGAA--C----TT---G-------------AAG-AC-----T-------G----A--C-AT----TTC----A---AAA-ATATATAATTCAGTTTAAG--------------GATAGAAC---TAT--T--T-C------------TGTTT-AAGC-ATACA--C---TTTAA--GATAATTT---------------------TGA---TT----TTTTTA---A---ATAT---AAAC--A---GTAA-TGTTAACT-TGG-A----TATTGAT---TTT---T-----------T-----------A--TA--TA------T---AT------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGATA--T----------TGT-----TCGACT---------G----------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T----A----CTAT------GAA--AT--AGTATT---TT-ACTGTTCAATATTCTAAATAAA----T-----A----A----AATA------AAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA---ACAACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTAT-G--TAATGTTCCGGCATACATGTGACAC-AAACTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA-TT----TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTGA--A----CTAT------GAA--AA--CTTGTT---TTTACAGCTAAACATTCTAAACAAA----T-----A----A----AACA------AAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAA---GCATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATAA--AAATATTTTGGACTACACTTGACACAAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG-----------TTT-AT------TT------C----TTTG----AAACTA-------TA---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : ATGTTT---------A-T-------T-TCTTTGA--AACTATAT-AC------A--AT--GA-C--TTGAA--------GA--A--G-T-T--T---T---T---C--TC--C-AATAG-AC---A---AT-TGAA--C----TT---GATGACT-------GAACAT-----T-------T----T--C-TT----GTT----A---AAT-ATACATA------TTTAGA--------------------------------------------------------AT-AT-----C---TT--A--GATT---T---------------------T-----TT----TTC------A---ATAT---GCAC--A---CACA-TGTAAACT-TCA-A----GATTTAA---TTT---------------------------A--TG--TA------T---CTAGA-TCAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAATA--TA-G-------CAT-----TTAA---------------A-TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTGA--A----CTGT------GAA--AT-----ATT---TA-ACA-TTTAACATTTTAAAGAAA-AGTT-----A----G--------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA---ACAACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-T--TAATGTTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 11111111111111 666666666666666666666666666666666666666666666666666666666666666 111111111 333333333333333333333333333333333 111111111111111111111111111111 1111111111111 2222222222222222222222222222222222222222 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111111111111111111111 11111111111 22222222222222 1111111111111111111111 1111111111111111 111111 11111111111 4444444444444444444444444444444444 1111111
lowQualScore : 0 1111 5 33 1 2 44444444444444 444 7777 3 7777777777777 5555 000000000000000000000000000000000000000000000000000000000000000 1 111111111 11 3 555555555555555555555555555555555 2 33 4444 2 999999 33 2 3333 88888888 55 999999999999999999999999999999 66 999999999999 33 5555 444 9999999999999 2 9999999999999999999999999999999999999999 2 1 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 55 2 666666 55555 33 2 33 1 6666 0 888888 77777777777777777777777 11111111111 2 444 44444444444444 55 55555 2 8888888888888888888888 0 2222222222222222 3 888888 5555 3 222222 66 44444444444 2 5 2 4444444444444444444444444444444444 4 88888 888 1 0 8888888 3 888888 3 6666 2 3 44 0 6 1111111 3 666 4 1 0
lowQualScore : . .... . .. . . .............. ... .... . ............. .... ............................................................... . ......... .. . ................................. . .. .... . ...... .. . .... ........ .. .............................. .. ............ .. .... ... ............. . ........................................ . . ....................................................................................................................................................................................................................................... .. . ...... ..... .. . .. . .... . ...... ....................... ........... . ... .............. .. ..... . ...................... . ................ . ...... .... . ...... .. ........... . . . .................................. . ..... ... . . ....... . ...... . .... . . .. . . ....... . ... . . .
lowQualScore : 8 1111 7 44 4 4 88888888888888 111 4444 5 2222222222222 3333 999999999999999999999999999999999999999999999999999999999999999 8 555555555 55 6 999999999999999999999999999999999 5 22 8888 2 444444 11 4 5555 11111111 33 000000000000000000000000000000 44 888888888888 22 0000 111 7777777777777 4 4444444444444444444444444444444444444444 5 7 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 00 4 888888 99999 11 2 11 8 9999 1 666666 00000000000000000000000 11111111111 4 111 77777777777777 44 99999 4 2222222222222222222222 7 8888888888888888 0 333333 7777 2 333333 33 11111111111 4 9 2 0000000000000000000000000000000000 0 33333 555 4 2 5555555 1 888888 1 5555 9 1 22 3 7 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTCAA-C--TTGGA--------GA--T--G-A-C--T---T---T---T--TC--A-AATAG-AT---A---AT-TGAA--C----TT---G-------------GAG-AT-----T-------T----A--C-TT----TTT----A---AAA-ATATATAATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T--TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTCAA-C--TTGGA--------GA--T--G-A-C--T---T---T---T--TC--A-AATAG-AT---A---AT-TGAA--C----TT---G-------------GAG-AT-----T-------T----A--C-TT----TTT----A---AAA-ATATATAATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T--TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA-TT----TTT-----------------------TTC----AG---AAACTATATA---TA--C-A-------TATATAGTATATTGACTCTAAGTTAACGAT-G--T--ACTGAGCATCAAAATTGAACT-------T-TCATTGA--AA---AGC-AC------A--ATTCAA-C--TTCGG--------GA--T--TTA-C--A---T---T---T--TC--A-AATAT-CT---G----T-T-AT--C----TG---G-------------GAG-AT-----T-------A----A--C-TA----TCTGTG-A---AGA-AC-TATCATTTAAATAGGA--------------TATACAAT---TTTAATAAT-C------------G--TT-ATAC-AC-----CAGCTC--GAGGAGA---A---------------------T-GGGCTT----TTT------A---ATGT---AGAT--A---ATAA--ATAAA-T-TATTA----TAATAAA---GTT------A------TAG-----------A--TA--CA------T---CTAGA-TCCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGATA--CAGA-------GAC-----TGGACTTGTGAG---C-A-G-TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTCA--ACATTCTTT------GAA--AT--C-CATT---ATT-CAGT
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgACATCTAGATCCTCTTGGAGATTA--T--AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA-GT----TGT------------------------------AA---A-------TAATGTA--C-A-------TGTGTATTATCTTGG-------------------T--TAT-TCAAC---------A-T-------T--CTTTGA--AA---TCC-AT------T--ATTCA--------GT--------AA--T--C-A-CAGT---A---T---G--T------ACAG-AG---A---AT--GAA--C----GT---G-------------GCG-AT-----T-------T---------------TTT----A---AAATATA-ATAATTCAACTAAGA--------------AATTGAAC---ATA--T--T-T------------T--TT----T-TT-----T---TT--A--GATA---T---------------------T-------------------------TAC---ATCT--A---G-----GTCA-TT-TTGGA----AATTGAAGTTTTT---TAT-------TAC-----------A--T---TA------------AAA-TCAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAATAC-TA-A--------AT-----ATAACTTG-T-GGTGG-ACA-TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTGA--A----CTGTTTTTAAAAA--GT--GATA-T---TTTAC--TTGGAGATTCaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatTTT-A-A-TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTCA--A----CTGT------TAG--AT--ATTATT---GTAACA-TTTAACATTCTAAATAAA-AGTT-----AGTCTA----AATA------GAC-TATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAA---CCAACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGAT-A--TAATTTTCCGCGCTGCATCTGACAC-AAACTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGATaactttatttgaagta
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------GA--A----CT-------------AT--TAT------TCTGCAATTAAACATCTTACATAAA-GTTT-----ATT--A----TACA------AA--TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA---AAAACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTAT-A--CAATGCTCCGAAATATATCTGACTC-AAAC-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A-CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTGA--A----CTAC------GAGGTAT--TAT------TTTACAGTTAGTCGTTCGAAAGAAA-TGT------A----A----GATACAATTGAA--TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAAC--ATAA-GGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTAC-A--TAAGGTT---------AT-----------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GAGA---T---------------------T-T---TT----TTA------A---ATAT---ACAC--T---GAAA-TGTTA----------------TGAT---TTT---TAT--------------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAAA--TA-A-------CAT-----TTAATTTG-AAGATTGTA-C-TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA---------T--ATCATCTTGTAGAACAA--A----CTGT------AAA--TT--TTTA-T---TTTACAGTGAAACCTTCTGAATAGA-AGTTAATTAA----A----AGAA------AA--CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-ACTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT-TT----TTT-CTTATTCATT------C----TTTC----AA---ATT-----TA---TA--C-T-------TCTAGATCATCTTGA-----TA--AACGAA-A--T--TA-ATATA----------A-TTTGGAGAT-TATTTGACCAA---TAG-TT------A--ATTGAA-C----GGA--------AA--T----A-C--T---T---T---TTATC--A-AAT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT-TT----TTT-TCGATA--TA------CATAGTTTT----AG---A-------TA---TAAAC-T-------TCAAAGTCATCTTGG-----AA--AATTAA-GATT--TGTATTTAT---------A-T-------T-T-------------------------A--ATTCAG-T--TTGGA--------GA--TTGA-A-C--T---T---T---C--TCTGA-AACTC-AT---ATTTAT-TTAC--T----TT---GAAATAAAATGTTTGAC-AT-----TAA-----T----A--A-TTGAAATTG----A---AAA-TTATATAATCCAATTTAAA--------------GACTGCAT---ATT--T--A-CACA---------T--TT-AGATAAT-----C---TT--G--GAGA-------------------------T-A---TT----TTT------A---Acttctaatgacctttt
gi|2 : gt-------T-TCTTTGA--AA---TAC-CT------A--ATTCAA-C--TTCGA--------GATTT--G-A-C--T---T---T---T------A-GATCT-AT-------GT-TAGA-------TG---G-------------GAT-AT-----T-------A----A--T-CT----TCT----GT--GAA-ATAT---ATTCAGCTTAGT--------------TATTCAAT---ATA--C--A-CA-----------T--TT-AGATCATG----T---TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--A---GTAAGCGT----T-TG-------TATTGAT---TTTG--TGTG------TGT-----------T--TACCTA------T---GTATA-TCAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAATA---A-A-------CGTAGGCATTCTTTTA-AATATTT-A-A-TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATAAAGA----TTGTTAA---GAAC-AT--TGAATTCAACTTGGAGATGGACTTTTTAAATAGATAATT-----G----A----Aa
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT-AT----TTT------------------------TC----AA---AATG----TA---TA--C-TAGTACTTTCTTGGCCATCTTGG-----AG--AATAAA-G-----------------------A-T-------T-G--TTAA--GA----AC-ATTG----A--ATTCAA-C--TTGGA--------GA--TG-G-A-C--T---T---T---T--T---A-AATAG-AT---A---AT-TGAA--C----TTTTAA-------------AAG---------------------A--C-TT----TTTCAAAA---AAA-AAATATAATTCAAACTAAG--------------GACAAAACAATTTA--T--T-TTAAATATACACAT--TT-AGATAATG----T---TT--G--GAGA---T---------------------T-----TT----GTT------A---ATAT---AAAC--C---GTAAGCGT----T-TG-------TATTG-A---TTT---TGTG------TAT-----------G--TT--TA------CTTAGTATA-TCAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAATA--AA-A-------CAT-----TTTACTTG-GAAGTTG-A-ACTT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTGA--A----CTTT------GAA--A---TATTAT---TTTACA-------ATTCTAAGCAAA-TG--------------------A------AA--TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTACGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCT--CACTAAATTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAATA--C----------CAT---------CTTG-GCGATTG-A-A-CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatC-AG------A--ATTTGATC--ATGGA--------GA--T----A-C--A---T---A---T--AG--A-AATA---T---A---GT-TAAA--CAGTCTT---G-------------GAG-AT-----TGGTTGAGC----A--T-TT----TTT----A---AAA--TGTATAATTCAACTTactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|21 : cagctcgtagatgaggggtTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T-TT----TTT-TG------TT------C----TTTC----AA---A-------TA---TA--T-T-------TCTAGGTCATCTAGA-----AG--AACGAA-GT-T--TATATGTAT---------T-T-------T-TCTTAGT--AA---TAC-AT------A--AT--A-------GGA--------GA--T--G-A-T--T---T---T---T--TT--------------------T-CAAA--C----TT---G-------------CAG-AT-----T-------T-------T-GT----TTT----A---Atttttttttgttctttcaaatatatttctaggtcatctagaagaacgaagtttatatgtatttttcttagtaatacataataggagatgattttttttcaaacttgcagattttgttttaa
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCAATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTAT-A--TAATGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---ACAA-----------------TAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCA-A--TAAT-TTCCGTGCTGCTTCCGACAC-AAACTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---ACAATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTAT-A--TATTGTTC-GGACTACTTCTAACAC-AAACTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : --TTCATGTAG---------T-T-------TATCTTTGA--AA---AAC-AT------A--ATTCAG-T--TTGGATTTTCAACGT--T--G---C--T---T---TACAG--TT--A-CACAGTATGCAA---AT-TAAAAGA----TT---G-------------GAC-CT-----T-------T----A--T-TT---------------AGT-ATATATGATTCAACTTAGA--------------GA-TGGTG---TTG--T--T-C------------T--TT-------T-----CG--TT------------T---------------------T-G---TT----TTT------A---ATAT---agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacaAGATTGG---ACC-TT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT-TT----TCG-TT------TT------G----TTTT----TA---A-------TA---T---C-TTCA----TCTAGATCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaATT------TAT-----------A--TA--TT------T---GCACA-T-AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------CA--TA-A---------T-----TCAACTAG-GAGATTG-T-A-TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC-TT----TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaactgcgTTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT-TT----TTT-TT------
gi|28 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaa-------T-TCTTTGA--G----TAC-AT------A--ATTCAA-C--TTGGA---------------G-A-C--T---T---T---T--Taaa
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaattaaacgTTTCC-ATCCGTATGCTTAT-ATATAATGTTCTGGGGCACATCTGGCAG-AAACGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTtttaaa
gi|3 : TTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT-TT----TA--------------------------C----AA---A-------TA---TA--T--------------GTCATCTTGG-----AG--ATTAAA-G-------------------------T-------T-TCTTTGA--AA---TATAAT------A--ACTAAA-C--T---A--------GG--T------T--T---TATAT---T--TA--A-AATTG-AT---A---CG-TCAG--T----TC---G-------------GAG-ATGATGAT-------TCGGAA--A-TT----TTC----ATGGAGA-A-ATATAATTACATCTAGGCCATCGGGGCGATTGAGTGAA-----TA--T--T-C------------T--TTGAGAT-A------C---TT--G--TGTA---T---------------------A-A---TTCAACTTTCTTTCAA---ATAT---ATAC--ATCTGGAT-TGTC-----TAAGA----GAACGAAGTCTTT---TATG------TATATTTCTTTGAAA--TA--CA------T---GTACA-TAATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AATAGTTA-A-------TA--------AACTT-----AATG-A-C-TT---TT---T----------TT--A-----AAT-A------------T---------ATATAA
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaaAACT---GGT----GATTGAA---CTT---T-TA------CAA-----------A--TA--TA------T---GT-----CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAATA--TA-A----------------TAACT----AAACTA-G-G-TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TGATGA----TTCG------GAA--AT--Tttcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AA---A-------TA---TATAC-A-------TCTGGATTGTCTAAG-----AG--AACGAA-G--TCTTTTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-ATGTACATA--ATAGAA-AAATCGGA--------GA--T--G-G-G--G---T---T---T--TC--C-AATAG-TT---A---AT--AAA--C----TT---A-------------ATG-AC-----T-------T---------TT----TTT----A---AAT-ATATATAATTCAATTTAAA--------------GGCT---T---TTA--T--TTC------------T--TC-AGATCAT-----C---TT--G--AATA---T-----------------------A---TT----TTT------A---A-AT---GCACGTA---GAAA-TGTAATAT-TGGAA-----ATTGAA---CTT---TATG------TAT-----------A--CA--TGAACCTGT---ATAGA-TCAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAATA--TA-A-------TAT-----TCAACTttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATG------TAC-----------A--TA--TA------T---GTCGA-TCAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATTA--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : -T-------T-TCTCTGA--AG---TAC-AG------A--ATTTAA-C--TTGGA--------GA--TT-G-AGC--T---T---TAT-T--TT--A-AATGT-AT---A----T-T-AT--C----TT---G-------------GAG-AT-----T-------T----AAAC-TT----TTT----G---ACA--TGAATAATTCAACTTAGA--------------TA--------------------------------T--TT-A----AT-----T---TT--G--CA-A---T---------------------T-A---A--------------A---ATTT---ATAC------------GTCAGCTGTGAGATAATGGTTGAA---CTTGTTCATGAAGAAATAT-----------AAATA--CA------T---CTAGA-TCAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAATA--CA-ATGTACATCAT-----TCAACTTG-GAAAATA-C-A-CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT---------CTTT------GAA--A
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacACATCTAGATCATCTTGTAGATTG----AAA-TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG-TT----TT-------------------------------AA---A-------GA---TA--T--------------ATTACCTTT--------------AA-G--T--TAGAGAT-----------------------TCTTTGA--AA---CAC-AT------A--ATTCAA-C--TTGGA--------AAT-T--G-A-T--TTAAT---T---T--TC--ACAATAT-AT---AT--ACACAAG--C----CT---A-------------GGG-AT-----G-------TA---A--C-TT----TTT---------AA-ATATATAATTCAAATTAGA--------------GATTAAAC----TG--T--T-T------------T--T----AT-TT-----C---TT------------T---------------------T-T---TT----CTT------AGATATAT---ACAT--A---TCTA-TATCATCT-T-GGA----GAATAAAGG-TTT---TATG------TAT-----------A------------------GTCAATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAATA--CA-T-------AAT-----AGAACTTG-GAGG-TG-A-A-TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTGA--cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatATATATACACAAGCCTAGGGAT--GT--AAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGAT---A-------TA---TA--CATA------TCTATATCATCTTGG-----AG--AATAAAGG--T--TTTATGTAT---------A-G-------T--------------------C------A--ATTCAA-T--TTGGA--------GA--TTGA-A-C--T---TCC-T---T--TA--A-AATAC-AT---A---AT-AGAA--C----TT---G-------------GAG-GT-----G-------A----A--T-TT----T-----------AA-ATAGATAATTTTACTTGAA--------------GATTGA------CA--T--T-T------------T--TT-AAAT-AT-----A---T-------ATA---TAATTCATTTAAAAGACTGACCT-A---TT----TCTTTTTA-A---ATAT---ACAC--A---CGAC-GATTAAAT-TTGGA----GATTGGT---TTT---CATG------TAT-----------A--CC--CA------T---CTGGA-TCAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAATA--TA-A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT-TT----TTTGCT------TTTTTCTTC----TTCC----AA---A-------TA---TA--C-T-------TCTAGAACATCTTGG-----AG--AACGAA-GG-T--TATATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTTAA-A--TTAGA--------GA--T--G-A-T--T---T---T---T--TC--A-AATAG-AT---A---AT-TGAA--C----TT---G-------------AAG-AT-----T-------T----T--C-TT----TTT----A---AAA-ATATATAATTCAATTTAAA--------------GACTGAAC---TTG--T--T-C------------T--TT-AGATCAT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------G---ATAT---ACAC--A---GAAA-GGTAAACT-TGGGA----GATCGAA---TTT---TATG------TAT-----------G--TA--TA------T---GTAGA-TCAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAATA--TA-G-------CGT-----TTAACTTG-GAGATAA-A-A-TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGGT--A----TTGT------ACA--AT--TATATT---TTTAAAATTTAACATGATAAATAAA-AGTT-----A----A----ACTAT-----AA--TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC---------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTAT-G--TAATTAACCGGGCTACATCTGACAC-AAACTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : -AT---A---AT-TGAA--C----TT---A-------------AAG-AT-----T-------T----A--CATT----TTT----GT--AAA-ATGTATAATTAAATTTAAA--------------GACAGAAC---GTT--T--T-T------------T--TT-AAAT-ATAAACAT---TT------ATA---T---------------------C-A---TC----TTT------AGAAATATGTTACAC--A---GTAA------------------------------------ATG------TAC-----------A--CAG-TAA-----T---GTAAA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT--------------CAT---------CTTG-AGGATTG-A-A-CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTCA---------------A----CTGT------GGA--ATATTATGTT------ACAGTTAAACATTCTCATTAAA-GGTT-----A----ATTAAAGTA------AAATTATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAATGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAAT-A--AAACGTTCCAGGCTACTTCTG-CAC-ATACTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGA--AT---TGC-AT------AGCATT--A-C--TTGTA--------TA--TC-G-A-C--T---T---T---T--T---A-AATAG-AT---A---AA-TGAA--C----TT---G-------------AAG-AC-----T-------G----A--C-AT----TTC----A---AAA-ATATATAATTCAGTTTAAG--------------GATAGAAC---TAT--T--T-C------------TGTTT-AAGC-ATACA--C---TTTAA--GATAATTT---------------------TGA---TT----TTTTTA---A---ATAT---AAAC--A---GTAA-TGTTAACT-TGG-A----TATTGAT---TTT---T-----------T-----------A--TA--TA------T---AT------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGATA--T----------TGT-----TCGACT---------G----------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T----A----CTAT------GAA--AT--AGTATT---TT-ACTGTTCAATATTCTAAATAAA----T-----A----A----AATA------AAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA---ACAACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTAT-G--TAATGTTCCGGCATACATGTGACAC-AAACTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA-TT----TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTGA--A----CTAT------GAA--AA--CTTGTT---TTTACAGCTAAACATTCTAAACAAA----T-----A----A----AACA------AAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAA---GCATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATAA--AAATATTTTGGACTACACTTGACACAAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG-----------TTT-AT------TT------C----TTTG----AAACTA-------TA---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : ATGTTT---------A-T-------T-TCTTTGA--AACTATAT-AC------A--AT--GA-C--TTGAA--------GA--A--G-T-T--T---T---T---C--TC--C-AATAG-AC---A---AT-TGAA--C----TT---GATGACT-------GAACAT-----T-------T----T--C-TT----GTT----A---AAT-ATACATA------TTTAGA--------------------------------------------------------AT-AT-----C---TT--A--GATT---T---------------------T-----TT----TTC------A---ATAT---GCAC--A---CACA-TGTAAACT-TCA-A----GATTTAA---TTT---------------------------A--TG--TA------T---CTAGA-TCAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAATA--TA-G-------CAT-----TTAA---------------A-TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTGA--A----CTGT------GAA--AT-----ATT---TA-ACA-TTTAACATTTTAAAGAAA-AGTT-----A----G--------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA---ACAACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-T--TAATGTTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
blockSeqs : ATTG A CG G A TTGTTTGC ATG CATC G TGGTGTTGTTCT TTTA TTCGATATACATAGTTTTAGATATAAACT T TA CG G TTAATATAATTTGGAGA A CC CTAT A GTACAT GC C AAA TTTTCAAC TT TGAACTTTCTCTGA GT ATTTATTT AG AGTC TTA AAATAAAATGTTT C GATGATTCGGAAATTTTCATGG T C CCATCGGGGCGATTGAGTGAATATTCTTTGAGATACTTGTGTATAATTCAACTTTCTTTCAAATATATACATCTGGATTGTCTAAGAGAACGAAGTCTTTTATGTATATTTCTTTGAAATACATG AA T AGAAAA TAGAT TT C AT T ACAA TACAAT CAATGTACATCATTC AAGATTGTA C CAA TATTTGGATAA CC ACTTG . TTTTTCAAAATGT TAGTACTTTCTTGG T ATAAAG . G TTTTAA GT TGAATTCAA T A T GGTTAATTAAAGTAAAAT T CATAG CAA C TTGAT G TACATT A GGTT A A TA T . A . T T
blockSeqs : GTTG A . G . CTTGTGT . G A TTAAACTG . TCTTATTCATTCTTTCAAATTTATACT G AA TT . ATTTGTATTTATAT . . T . TG . G TC . T TGAGCTTTATTTTA G GCAAATTA . . . ATGACT . TGGTTGAGCATTTTTTA . T GATTGACATTTTTTAAATATATATATAATTCATTTAAAAGACTGACCTATTTCTTTTTAAATATACACACGACGATTAAATTTGGAGATTGGTTTTCATGTATACCCATC AT . . . . . . G A A AACGTAGGCATT TGGTGGAC . . TAAATA G . . TTGAGTTTGG AAAACTATCTA C TGATG . G TAA C ATTATGTT A G A TGTAAGATACAATTGAA . . C C ACCT . . . . . . . A . . . . T
blockSeqs : AGTG . . T . C . . G TTTAACT . TGCTTTTTTCTTCTTCCAAATATACT A AG TA . TCTTTTATGTATAT . . T . . . C C . . GATTTAATTTTCAC C ATACACA . . . . . TAATAATTGAAATTGA . C GACAAAACAATTTATTTTAAATATACACATTTAGATAATGTTTGGAGATTTTGTTAATATAAACCGTAAGCGTTTGTATTGATTTTGTGTATGTTTACTTAG AT . . . . . . T . . CTAAATAT AATATTAC . . ATAT G . . A CTATGTAGA T TTGA . A . . ATTATT T G A AGTTAATTAAAAGAAAA . . . C A . . . . . . . . . . . . T
blockSeqs : ATTG . . A . T . . A TGGAACT . TCTTTTTTTCTTAGATATATACATA G AG CG . TTTATATGTATTT . . T . . . C T . . TGAACTTCCTTTAA T AATTG . . . . . ACTTTTTCAAAA . A GATAGAACTATTTCTGTTTAAGCATACACTTTAAGATAATTTTGATTTTTTTAAATATAAACAGTAATGTTAACTTGGATATTGATTTTTTATATATA AC . . . . . . G . . TAACATTT AATATTTA . . CT G . . T AAATATCTG T CTCA . G . . TATTAT T G A GTTTATTATACAAA . . . T A . . . . . . . . . . . . C
blockSeqs : GTTG . . A . A . . A TTGAAAT . TTCAAAATGTATACTAGTACTT G AG TA . GTTATATGTATAT . . T . . . C C . . GCTTTACAGTTA G AGTTA . . . . . TTAAACTTTTTG . C GGCTTTTATTTCTTCAGATCATCTTGAATATATTTTTAAATGCACGTAGAAATGTAATATTGGAAATTGAACTTTATGTATACATGAACCTGTA AC . . . . . . T . . AAACATTT GAAGTTGA . . CT G . . T ATATATCTA T CTGA . G . . TATATT T A G AGTTAAACTATAA . . . T A . . . . . . . . . . . . T
blockSeqs : GT . . G . T . . G TTGTATC . GTTTTGTTTTTAATATCTTCA G AG CG . TTTTATGTATAG . . A . . . T C . . ACTTTTTATCA G ACGTC . . . . . TTACATTTTTGT . C GACTGAACTTGTTCTTTAGATCATCTTGGATATTATTTTTGATATACACAGAAAGGTAAACTTGGGAGATCGAATTTTATGTATGTATATG AG . . . . . . T . . TAATATTC GCGATTGA . . T G . . T ATAAATCAA T ACAA . T . . AGTATT T G T TAAAATAAAA . . . C A . . . . . . . . . . . . T
blockSeqs : G . . G . T . . G TTGAACT . TTGTTCTTTCAAATATATT G AG TA . TTATTCAACAT . . T . . . C T . . TTTATATTTAA G AATAG . . . . . TAATCTTCTGT . T TATTCAATATACACATTTAGATCATGTTTGGAGATTTTGTTAATATAAACAGTAAGCGTTTGTATTGATTTTGTGTGTGTTTACCTATG CG . . . . . . T . . CATAATAG GAGATTGT . . T T . . T AAATATCTA T CTGA . C . . CTTGTT T G A TAAAACAAAA . . . T A . . . . . . . . . . . . A
blockSeqs : . . . G . T . . G ATACACG . TCTTTCAAATATATACA T AG CG . TTAGAGAT . . T . . . C C . . CACAGTATGT T AATTG . . . . . GTAACTTTTT . T TATTTAATTTTGCAATTAAAATTTATACGTCAGCTGTGAGATAATGGTTGAACTTGTTCATGAAGAAATATAAATACATC AG . . . . . . T . . TAACATTT GAAAATAC . . T A . . T AAATATCTT G TTGA . T . . GATAT T G C AGTTAG . . . C A . . . . . . . . . . . . .
blockSeqs : . . G . C . . A TTGATCT . TAAATAATGTACA G . . . AT . . T . . . A C . . GGACTTTTTA T AATTG . . . . . TTTCTTTTTA . C GATTAAACTGTTTTTATTTCTTTTTTTCTTAGATATATACATATCTATATCATCTTGGAGAATAAAGGTTTTATGTATAG CA . . . . . . G . . TAGCGTTT GAGATAAA . . T A . . T AAATACATA A CGGT . G . . TTTAT T . A TGAAA . . . C A . . . . . . . . . . .
blockSeqs : . . T . C . . G TTGAACA . CAAATATAT . . . . T . . T . . . G C . . GGGGTTTTCC C AAATG . . . . . TGACATTTCA . A GACAGAACGTTTTTTTTAAATATAAACATTTATATCATCTTTAGAAATATGTTACACAGTAAATGTACACAGTAATG GG . . . . . . A . . TAGCATTT AGGATTGA . . T G . . G AATTTTA C CTGA . G . . TAT . . T . . C A . . . . . . . . . . .
blockSeqs : . . T . T . . A TGAGCA . AAAGATAT . . . C . . . T C . . GATTTTTTCA G AATTG . . . . . TTTCTTGTTA . C AATTGAACATATTTTTTTTTTTTAGATATTTACATCTAGGTCATTTTGGAAATTGAAGTTTTTTATTACATTA AG . . . . . . T . . GTTAATA AAACTAG . . T G . . T AAATA T CTGA . A . . TAT . . . . . . . . . . . . . . .
blockSeqs : . . G . C . . T TTT . . . T . . . C T . . CGACTTTTTA G AATG . . . . . TTTGTTTTA . T ATATCTTAGATTTTTTTTCAATATGCACACACATGTAAACTTCAAGATTTAATTTATGTATC AA . . . . . . T . . TAATTC GAGGTGA . . T G . . G TACCT G GA . A . . ATT . . . . . . . . . . . .
blockSeqs : . . T . T . . G ACT . . . T . . . C A . . GTTTTTCTCC G GTTA . . . . . TTTTTTTA . T AG . . . . . . G . . TTGTTC AATGA . . A . . . T G C TT . G . . .
blockSeqs : . T . T . . . TG . . . . . . . T C . . ACATATAGA . AATA . . . . . GAATTTT . T . . . . . . . A . . CCAT G . . T . . . T . . T . . . .
blockSeqs : . . . T . . . . . . . . . . . . C . . GATTTTTTT . TCA . . . . . TTTTTA . T . . . . . . . A . . TAAT . . . . . . . T . .
blockSeqs : . . . . . . . . . . . . . . GACTTTTA ATT . . . . . TTATTT . . . . . . . G . . CAT . . . . . .
blockSeqs : . . . . . . . . . . . . .
blockSeqCons : ATTG T************* AG******* TTATATGTATAT********************* GATTTTTTCA******************** AATTG******* TTTTTTTA******************************** TAACATTT*************** GAGATTGA*** T************* G* AAATATCTA******* **** TNTATT***** ******* ***
originalCons : ACATCTAGACCATCTTGGAGATTGGTTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGG-----AG--AACGAA-G--T--TNTATGTAT---------A-T-------T-TCTTTGA--AA---TAC-AT------A--ATTCAA-C--TTGGA--------GA--T--G-A-C--T---T---T---T--TC--A-AATAG-AT---A---AT-TGAA--C----TT---G-------------GAG-AT-----T-------T----A--C-TT----TTT----A---AAA-ATATATAATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T--TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATA--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A-TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GAA--AT--TATATT---TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
finalCons : ACATCTAGACCATCTTGGAGATTGATTGAAC-TT--TCTTTGAAA-TAT-------------A---TA----ATTCAACTTGGAGA-----TTGAACT-TT----TTT-CT------TT------C----TTTC----AA---A-------TA---TA--C-T-------TCTAGATCATCTTGGAG-------AACGAA-GTTATATGTATAT---------------------T-TCTTTGA--AA---TAC-AT------A--ATTCAA-C--TTGGA--------GA--TGATTTTTTCA--------------------AATAG-ATAATTG-------AA--C----TT---G-------------GAG-ATTTTTTTTA--------------------------------AAA-ATATATAATTCAACTTAGA--------------GACTGAAC---TTN--T--T-C------------T--TT-AGAT-AT-----C---TT--G--GATA---T---------------------T-A---TT----TTT------A---ATAT---ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---TTT---TATG------TAT-----------A--TA--TA------T---GTAGA-TCAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAATATAACATTT---------------AACTTGGAGATTGA---A-TT---TTT-------------TTG-A-----AAT-A------------T---------ATACAAATATCTA-------TCATCTTGGAGACTGA--A----CTGT------GAA--ATTNTATT-----TTTACAGTTNAACATTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111111111 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 3333333333333333333333333 111111 4444444444444444444444444444444444444444444444444 111111 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11111111111111 11111111111111111111 333333333333333333333333333333333333333333333333333 1111111111111111 11111111111 111111 1111111 4444444444444444444444444444444444 1111111
lowQualScore : 8 33 2 2 33333333333333 333 6666 2 8888888888888888 2 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 2 33 444 2 999999 33 5 33 2 33 88888888 88888888 2 55 2222222222222222222222222 22 7777 22 2 6 333 22 4444 333 222222 2 2 6666666666666666666666666666666666666666666666666 000000 2 2 666 1 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 2 555555 55555 44 1 22 3 5555 777777 22 99999999999999 6666666 22222 55555555555555555555 333 444444444444444444444444444444444444444444444444444 1111111111111111 1 66666666666 3 000000 33 2 66 2 2 444 6 3333333 2 555 1111111111111111111111111111111111 3 88888 888 1 0 8888888 3 888888 3 6666 2 3 44 0 6 1111111 3 666 4 1 0
lowQualScore : . .. . . .............. ... .... . ................ . ................................................................................................................................................................ . .. ... . ...... .. . .. . .. ........ ........ . .. ......................... .. .... .. . . ... .. .... ... ...... . . ................................................. ...... . . ... . .......................................................................................................................................................................................................................................... . ...... ..... .. . .. . .... ...... .. .............. ....... ..... .................... ... ................................................... ................ . ........... . ...... .. . .. . . ... . ....... . ... .................................. . ..... ... . . ....... . ...... . .... . . .. . . ....... . ... . . .
lowQualScore : 0 22 2 2 44444444444444 999 9999 8 8888888888888888 4 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 5 22 111 2 444444 11 2 11 2 11 11111111 11111111 2 33 4444444444444444444444444 66 4444 99 1 9 777 99 5555 777 111111 1 1 5555555555555555555555555555555555555555555555555 888888 2 2 666 5 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 888888 00000 33 8 55 4 7777 000000 55 99999999999999 9999999 88888 00000000000000000000 333 888888888888888888888888888888888888888888888888888 4444444444444444 9 55555555555 8 333333 11 2 55 5 4 777 9 0000000 1 444 2222222222222222222222222222222222 6 33333 555 4 2 5555555 1 888888 1 5555 9 1 22 3 7 8888888 6 444 4 0 5
consensus : ACATCTAGACCATCTTGGAGATTGATTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT----TT-TTT-CT------TT------C----TTTC----AA---A-------T--A---TA--C-T-------TC----TAGA----TCATCTTGG-----AG--AACGAAG--T--TATATGTAT---------A------------------------T-------T-TCTTTGA--AA---TAC-AT------A--ATTCA--A-C--TTG--------GA--------G-A--T--GA--TT---T----TT-TC--A-AATA-GA----TA-AT-TNA---A--C----TT---G------GA-G-AT------T---------T------T----TT-----------T--TA---AA---A--A-TATA-TA---ATTCAACTTAGA--------------GACT--GAAC---T-----TN--T--T-C------------T--TT-AGA-T-AT-----C----TT--G--GATA---TT-A---TT----TTT------A---A-T-----AT--------ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---T---TT-TATG------TAT-----------ATA--TA------T---GTA--GAT-CAT------CTTG-----GAGA--TTG-AAC--TTTC----TTTG------AAAT--A--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A---------------TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GA--A-ATNNT-ATT---TTTACAG------TTNAACA---TTCTAAATAAA-NGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
Reference ( family-283 ) : ACATCTAGACCATCTTGGAGATTGATTGAAC-TT--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTGGAGA-----TTGAACT----TT-TTT-CT------TT------C----TTTC----AA---A-------T--A---TA--C-T-------TC----TAGA----TCATCTTGG-----AG--AACGAAG--T--TATATGTAT---------A------------------------T-------T-TCTTTGA--AA---TAC-AT------A--ATTCA--A-C--TTG--------GA--------G-A--T--GA--TT---T----TT-TC--A-AATA-GA----TA-AT-TGA---A--C----TT---G------GA-G-AT------T---------T------T----TT-----------T--TA---AA---A--A-TATA-TA---ATTCAACTTAGA--------------GACT--GAAC---T-----TN--T--T-C------------T--TT-AGA-T-AT-----C----TT--G--GATA---TT-A---TT----TTT------A---A-T-----AT--------ACAC--A---GNAA-TGTNAACT-TGGGA----GATTGAA---T---TT-TATG------TAT-----------ATA--TA------T---GTA--GAT-CAT------CTTG-----GAGA--TTG-AAC--TNTC----TTTG------AAAT--A--TA-A-------CAT-----TTAACTTG-GAGATTG-A-A---------------TT---TT---T----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCATCTTGGAGACTGA--A----CTGT------GA--A-ATTNT-ATT---TTTACAG------TTNAACA---TTCTAAATAAA-AGTT-----A----A----AATA------AA--TATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCCATACAACAA---ACAACGGTTTGTA---A---ATAG-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCTGACAC-AAACTTTAT-------T-AT---TTCATTTCTACTTGACCATTGTTTGCCCA-GGTTTCAGTACTTTAAGTACTTTGAT
gi|1 : -TT--CCTTTGCAG----------------------A----ATTCAACTTGGAGA-----TAAAACA----TT-TTT-----------------------TTC----AG---AAACTATAT--A---TA--C-A-------TA----TATA----GTATATTGACTCTAAGTTAACGATG--T--ACTGAGCATCAAAATTGAAC-----------------------T-------T-TCATTGA--AA---AGC-AC------A--ATTCA--A-C--TTC--------GG--------G-A--T------TTACAT----TT-TC--A-AATA-TC----TG--T-T-A---T--C----TG---G------GA-G-AT------TAACTA----T------C----TG-----------T--GA---AG---A--A-C-TA-TC---ATTTAAATAGGA--------------TATA--CAAT---T-----TTAATAAT-C------------G--TT-ATA-C-AC-----CAGC-TC--GAGGAGA---AT-GGGCTT----TTT------A---A-T-----GT--------AGAT--A---ATAA--ATAAA-T-TATTA----TAATAAA---G---TT----A------TAG-----------ATA--CA------T---CTA--GAT-CCT------CTTG-----GAGA--TTA-TAT--TTTC----TTTG------AGAT--A--CAGA-------GAC-----TGGACTTGTGAG---C-A-G---------------TT---GT------------------A-----AATAA------------T---------GTAC--A--TG---TGT--ATTATCTTGGTTATTCA--ACATTCTTT------GA--A-A-TCC-ATT---ATT-CAG------T
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgA---ATTCAACTTGGA--------------GATA--AAAC---A-----TT--T--T-T------------T--TC-AGA-A-A------C----T-------ATA---T--A---T------------------A-C-----AT--------ATAT--A---GTA--TATTGACT-C-----------T-AA---G---TT-AACG--------------------------A------T---GTACTGAG-CAT------C--------AAAA--TTG-AAC--TTTC----ATTG------AAAA--G--CA-C-------AAT-----TCAACTTC-GGGATTT-ACA---------------TT---TT------------------------------------------------------CAAA--TA---TCT--GTTATCTGGGAGATTAACTAT---CTGT------GAAGA-ACTATCATT---Taatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|1 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagACATCTAGATCCTCTTGGAGATT-AT---AT-TT--TCTTTGAGA-TA------C-------A---GAG---ACTGGACTTG----------TGAGCA----GT-TGT------------------------------AA---A-------T--AATGTA--C-A-------TG----TGTA----TTATCTTGG------------------T--TAT-TCAAC---------A------------------------T-------T--CTTTGA--AA---TCC-AT------T--ATTCAGTA-A--TCA--------CA--------GTA--T--G----------------T------ACA-GA----GA-AT--GA---A--C----GT---G------GC-G-AT------T---------T------T----TT-------------------AA---A--A-TATAATA---ATTCAACTAAGA--------------AATT--GAAC---A-----TA--T--T-T------------T--TT-----T-TT-----T----TT--A--GATA---TT--------------------------T-----AC--------ATCT--A---G-----GTCA-TT-TTGGA----AATTGAAGTTT---TT-TAT-------TAC-----------AT---TA------------A--AAT-CAA------CTTA-----GAGA--TTA-AAC--TTTA----ACTG------AAAT--AC-TA-A--------AT-----ATAACTTG-T-GGTGG-ACA---------------TT---TT---TATTTGGATAATTG-AACTTGAAC-A------------TTGAGTTTGGATGCCTA--TG---TAG--ATCATCTGGGAGATTGA--A----CTGTTTTTAAAA--A-GTGAT-A-T---TTTAC--------TTGGAGA---TTCaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatacatctagatcctcttggagattatattttctttgagatacagagactggacttgtgagcagttgtaaataatgtacatgtgtattatcttggttattcaacattctttgaaatccattattcagtaatcacagtatgtacagagaatgaacgtggcgattttttaaaatataataattcaactaagaaattgaacatattttttttttttagatatttacatctaggtcattttggaaattgaagttttttattacattaaaatcaacttagagattaaactttaactgaaatactaaatataacttgtggtggacatttttatttggataattgaacttgaacattgagtttggatgcctatgtagatcatctgggagattgaactgtttttaaaaagtgatattttacttggagattcaactttatttgaagta
gi|11 : cattattaactcggcaaattggcctttgtttagtagttgttgaagcaatcgactctaatttattctggagttatatatcggctgacctgaaactattttcgataacttctatttttgttattgcatacttaattaggttgtttttaattttattttcaaattcatatatatacaataagtccagaaggggtacggtttcaaaaactaaattataattctaatttacgtccacttaaacaacagcctgtgacgcagaatcctgcagaaatcatttatttgagttaattacgcttgcggtacacatttttcttacaacaatccatgaacgtcttatttataaaaatatgtttaaaatcaaagcaaaagtttttgtccatacatgcaataatatatttgtacatatcttacaatcgttcctttgcagaattcaacttggagataaaacatttttttcagaaactatatatacatatatagtatattgactctaagttaacgatgtactgagcatcaaaattgaactttcattgaaaagcacaattcaacttcgggatttacattttcaaatatctgttatctgggagattaactatctgtgaagaactatcatttaaataggatatacaattttaataatcgttatacaccagctcgaggagaatgggctttttaatgtagataataaataaattattataataaagttatagatTTT-A-A---------------TT---TT---T----------TTCCA-----GGT-G------------A---------ATTCAAA--TA---TCT--GTCTCCTTGGAGACTCA--A----CTGT------TA--G-ATATT-ATT---GTAACA-------TTTAACA---TTCTAAATAAA-AGTT-----AGTCTA----AATA------GAC-TATT-ATCATGTCGTATGTAT-----TTTGCTGTACCCATACAACAA---CCAACGGTTTTTA---A---ATAT-TAACCTC------TTA-TAA----ATCATTTTCC-ATCAGAATGCTGAT-A--TAATTTTCCGCGCTGCATCTGACAC-AAACTTTATAAGTCCAT-ATTTGTTTACTTCTACTTGACCTTTGTTTGTCCA-TGTTTCAGTACTATAAGAACTTTGATaactttatttgaagta
gi|13 : agagtttgcaattgcaaaattcacggaatg-----AAT-A------------T---------ATACATA--TA---TCT--ATCATCC--------GA--A----CT--------------ATTAT-------TCTGCAA------TTAAACA---TCTTACATAAA-GTTT-----ATT--A----TACA------AA--TCTTTAACCTGTCTTATGTAT-----TTTCTTGTACCCATACAACAA---AAAACGGTTTGTA---A---ATAG-TCATCTC------TGC-TCA----ATTATTTTCC-ATCAGTATGCTTAT-A--CAATGCTCCGAAATATATCTGACTC-AAAC-TTAG-------T-AT---TTCAGTTCTACTTAACCATTGTTTCCCAA-TGTTTCAGTACTTTAAGTACTTTGGTttctttataatagaacgatgtatataaacc
gi|14 : AT-----TTAATTTG-AATATTA-C-A---------------CT---TTC--T----------TTG-A-----TAA-A------------T---------GTACATA--AA---TCA--ATCATCTTGAAGTCTGA--A----CTAC------GA--G-GTATT-ATT---TT-ACAG------TTAGTCG---TTCGAAAGAAA-TGT------A----A----GATACAATTGAA--TATC-ATTCTGTCTGTCGTAT-----TTTGT---AACCACAGAACAAC--ATAA-GGTT-ATC---ACCTATAGGTATGCT-------TACATAAGGTTATCAC---CT-ATAGGTATGCTTAC-A--TAAGGTT---------AT-----------CTCTAT-------T-AT---TTCATTTATGTTTAACCATTATTTTGCTATGGTTTGATAACTTAAAGTACTtacattgacctgtatacaatgactcggatatatcatatttggcccatcattataattattatattat
gi|15 : g--G--GAGA---TT-T---TT----TTA------A---A-T-----AT--------ACAC--T---GAAA-TGTTA----------------TGAT---T---TT-TAT--------------------------------------------------------CTTG-----GAGA--TTG-AAC--TGTC----TTTG------AAAA--A--TA-A-------CAT-----TTAATTTG-AAGATTGTA-C---------------TT---TC---T----------TTG-A-----AAT-A------------T---------ATTTAAA---------T--ATCATCTTGTAGAACAA--A----CTGT------AA--A-TTTTT-A-T---TTTACAG------TGAAACC---TTCTGAATAGA-AGTTAATTAA----A----AGAA------AA--CATT-ATCCTGTCTTATGTAT-----TTTGTTGTACCTATACAGCAA---AC-ACTGTTATT---------TAG-TAATCTC------TAC-TAA----ACCATATTCA-TTCAGTATGC
gi|16 : ATATCTAGACCATCTGGGAGACGGATTGAACATTCGTCTTTGAAAATA------T-------A---TA----ATTCAACCTAGAGA-----TTTAACT----TT-TTT-CTTATTCATT------C----TTTC----AA---ATT-----T--A---TA--C-T-------TC----TAGA----TCATCTTGA-----TA--AACGAAA--T--TA-ATATA----------A------------------------TTTGGAGAT-TATTTGACCAA---TAG-TT------A--ATTGA--A-C----G--------GA--------A-A--T--AC--TT---T----TTATC--A-AAT
gi|17 : gtgttcaacttgttattcgtgtttgagatctttttcatggaaaaatataaatAAA-TA------A-------A---TA----AATAAACTTGGAAA-----TGGAACT----TT-TTT-TCGATA--TA------CATAGTTTT----AG---A-------T--A---TAAAC-T-------TC----AAAG----TCATCTTGG-----AA--AATTAAGATT--TGTATTTAT---------A------------------------T-------T-T-------------------------A--ATTCA--G-T--TTG--------GA--------G-A--TTGAA--CT---T----TC-TCTGA-AACT-CA----T--AT-TTATTTA--C----TT---T------GA-A-ATAAAATGT---------T------TGACATTAATAATTGAAAT--TG---AA---A--ATTATA-TA---ATCCAATTTAAA--------------GACT--GCAT---A-----TT--T--A-CACA---------T--TT-AGA-TAAT-----C----TT--G--GAGA----T-A---TT----TTT------A---A-cttctaatgacctttt
gi|2 : gt-------T-TCTTTGA--AA---TAC-CT------A--ATTCA--A-C--TTC--------GA--------G-ATTT--GA--CT---T----TT-----A-GATC-TA----T--GT-TAG---A-------TG---G------GA-T-AT------TAA-------T------C----TT-----------C--TGT--GA---A--A-TAT-------ATTCAGCTTAGT--------------TATT--CAAT---A-----TA--C--A-CA-----------T--TT-AGA-TCATG----T----TT--G--GAGA---TT-----TT----GTT------A---A-T-----AT--------AAAC--A---GTAAGCGT----T-TG-------TATTGAT---T---TTGTGTG------TGT-----------TTACCTA------T---GTA--TAT-CAT------CTGGTAGATGAAA--TTG-AACATTTTCACAATATGTACAATAAAT--A---A-A-------CGTAGGCATTCTTTTA-AATATTT-A-A---------------TTCAACT---TAAATA-----TTG-A-----AAT-ATTTTTCAAAATGT---------ATACTAG--TACTTTCTTGGCCATCTTGGAGAATAAAGA----TTGTTAA---GA--ACATTGA-ATTCAACTTGGAG------ATGGACT---TTTTAAATAGATAATT-----G----A----Aa
gi|2 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgT--TCTTTTAAA-TA------T-------T---TA----ATTCAACTTAAATA-----TTGAAAT----AT-TTT------------------------TC----AA---AATG----T--A---TA--C-TAGTACTTTC----TTGG----CCATCTTGG-----AG--AATAAAG------AT-TGT--------------------------------------------------TAA--GA----AC-ATTG----A--ATTCA--A-C--TTG--------GA--------G-A--T--GG--AC---T----TT-TT--A-AATA-GA----TA-AT-TGA---A--C----TTTTAA------AA-G-AC------T---------T------T----TT-----------CAAAA---AA---A--A-AATA-TA---ATTCAAACTAAG--------------GACA--AAACAATT-----TA--T--T-TTAAATATACACAT--TT-AGA-TAATG----T----TT--G--GAGA---TT-----TT----GTT------A---A-T-----AT--------AAAC--C---GTAAGCGT----T-TG-------TATTG-A---T---TT-TGTG------TAT-----------GTT--TA------CTTAGTA--TAT-CAT------CTGG-----TAGATTTTGCAAC--TGTC----ATTGA-----AAAT--A--AA-A-------CAT-----TTTACTTG-GAAGTTG-A-AC--------------TT---TC---T----------TTG-A-----AAT-A------------T---------ATATAAAACTA---TCT--ATCATTCTCGAGACTGA--A----CTTT------GA--A-ATATT-A-T---TTTACA-------------A---TTCTAAGCAAA-TG--------------------A------AA--TATT-ACCCTGCCTTATGTTT-----TTTGTTGTACCC-TACAGCAA---ACTACGGTTTCTA---A---ATAA-TAACCTC------TAT-TAA----ATCACTTTCC-ATCAGTATGCTTAT-A--TAATGTTCCGGGCTACATCT--CACTAAATTTTTT-------TAAT---TTCATTTCTACTTGACTATTGTTTGCCCA-GGAGTCAGTAC-TTAAGTAGTTAGATcttttaaaagactttttcaaaaaaaaaatataattcaaactaaggacaaaacaatttattttaaatatacacatttagataatgtttggagattttgttaatataaaccgtaagcgtttgtattgattttgtgtatgtttacttagtatatcatctggtagattttgcaactgtcattgaaaataaaacattttacttggaagttgaactttctttgaaatatatataaaactatctatcattctcgagactgaactttgaaatattattttacaattctaagcaaatgaaatattaccctgccttatgttttttgttgtaccctacagcaaactacggtttctaaataataacctctattaaatcactttccatcagtatgcttatataatgttccgggctacatctcactaaatttttttaatttcatttctacttgactattgtttgcccaggagtcagtacttaagtagttagattactcgttgaattaacgatataaagtcatat
gi|20 : gattaatgtgacgagcgatattgagtattttatgaaaaataatatatacatatatattatatagtatattgactctgagctaacgatgaactgagtgtcaacacgttctttgaaatacctaattcaacttcgagatttgacttttagatctatgttagatgggatattaatcttctgtgaaatatattcagcttagttattcaatatacacatttagatcatgtttggagattttgttaatataaacagtaagcgtttgtattgattttgtgtgtgtttacctatgtatatcatctggtagatgaaattgaacattttcacaatatgtacaataaataaacgtaggcaA--TTC-AAC--TTTC----TTTT------AAAT--A--C----------CAT---------CTTG-GCGATTG-A-A---------------CA---TT---T----------TCT-A-----AAT-A------------T---------ATAtactcgttgaattaacgatataaagtcatat
gi|21 : atgcataattcaactatcagattatacttaaaaacaaaaaaaaacaaaaatatacattacaatgtacatatgtatatatattgactccgagctaacggagtgcagaatgtcaatC-AG------A--ATTTG--ATC--ATG--------GA--------G-A--T--A-----------------C--A-TATA-GAAATATA-GT-TAA---A--CAGTCTT---G------GA-G-AT------TGGTTGAGCAT------T----TT-----------T--TA---AA---A----TGTA-TA---ATTCAACTTactgtctttgaaatgaggggtaatttgatcttggtccaaatgagggcaattgatttgactttgtaatt
gi|21 : cagctcgtagatgaggggtTAAACAGTCTTGGAGATTGGTTGAGC-AT--TTTTTAAAA-TG------T-------A---TA----ATTCAACTT----------TT----T----TT-TTT-TG------TT------C----TTTC----AA---A-------T--A---TA--T-T-------TC----TAGG----TCATCTAGA-----AG--AACGAAGT-T--TATATGTAT---------T------------------------T-------T-TCTTAGT--AA---TAC-AT------A--AT--A---------G--------GA--------G-A--T--GA--TT---T----TT-TT-------------------T-CAA---A--C----TT---G------CA-G-AT------T---------T------TG---TT-----------T--TA---Atttttttttgttctttcaaatatatttctaggtcatctagaagaacgaagtttatatgtatttttcttagtaatacataataggagatgattttttttcaaacttgcagattttgttttaa
gi|22 : cagctcgtagatgaggggtcagaatttgatcatggagatacatatagaaatatagtCTTGTATTATGTGTCATAGTTTGCTGTACACATACAACAACAAGCAATGGTTTGTA---A---ATAG-TAGCCTC------TGC-TAT----ACGACTTTCC-ATCAGTGTGCTTAT-A--TAATGTTCCGAGCTACATCTGAC-C-AA
gi|23 : aacagtttttttgttccatgttttctgaagtcaaacactggtattccacacgcaTTGTACCTATACAACAA---ACAA-----------------TAT-TAACCGC------TAC-TAA----ATCACTTTCC-ATGAGTATGCTTCA-A--TAAT-TTCCGTGCTGCTTCCGACAC-AAACTTCAT-------T-AT---ATTATTTTGACTTGACCATTGTTTGCCCA-GATTTCTGTTCTGTAAGTGCTTTGggcaatctatagagatatacaagtccttgatctcttcttgagtcttc
gi|24 : TATGTAG-----TTTGTTATA--------ACAA---ACAATGGGTTGTA---A---ATAG-TAAACTC------TAA-TAG----ACCACTTTCC-ATCAG----CTTAT-A--TATTGTTC-GGACTACTTCTAACAC-AAACTTTAT-------T-AT---TCCATTTCCACTTGACCATTGTTTGCCCA-GGTTTAAGTACCTAGAATGCTTctttattatcagcattaaaaatataaaatcatagttcaaccagcccgtgagaattattccagagcatt
gi|26 : ATGTAG---------T------------------------T-------TATCTTTGA--AA---AAC-AT------A--ATTCA--G-T--TTG--------GATTTTCAACG-T--T--GC--TT---TACAGTT-AC--ACAGTATGC----AA-AT-TAA---AAGA----TT---G------GA-C-CT------T---------T------A----TT-----------T-------AG---T--A-TATA-TG---ATTCAACTTAGA--------------GA-T--GGTG---T-----TG--T--T-C------------T--TT--------T-----CG---TT------------TT-G---TT----TTT------A---A-T-----AT--------agttaattagatacaaatattcacgttttcaaggcaacgtgcaaaat
gi|26 : ttgaaatacattcGATTGGACCTT--TATTTAGTA-TA------T-------A---TG----ATTCAACTTAGAGATGGTGTTGTTCT----TT-TCG-TT------TT------G----TTTT----TA---A-------T--A---T---C-TTCA----TC----TAGA----TCATCTcttcatctagatcatct
gi|27 : ttgaaatacattcatgtagtttatctttgaaaaacataattcagtttggattttcaacgttgctttacagttacacagtatgcaaattaaaaATT------TAT-----------ATA--TT------T---GCA--CAT--AT------CTAG-----CA-A--CTG-CGC--TTTG----TTTG---------C--A--TA-A---------T-----TCAACTAG-GAGATTG-T-A---------------TC---TT---T----------
gi|27 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcACTGCGC-TT--TGTTTG------------C-------A---TA----ATTCAACTAGGAGA-----TTGTATC----TT-TAT-CT------atct
gi|28 : tttttcttacagtacttcagaaacgaaacgactttgaaatcaaaactaataggttcaaagaaaacacaaaatgactttcccttgtatgcatttatatatttgcacatatctagcaATTAAAC-GT--TCTTTGAG--TA------C-------A---TA----ATTCAACTTGGAG----------ACT----TT-TTT-TT------
gi|29 : tattattcataatgcaatataactatcttcatttttaccatcgatgtattcaaaagtacatttaatttaccatgactctgggctaactgtgtgcagagtgtcaaaTTTCC-ATCCGTATGCTTAT-ATATAATGTTCTGGGGCACATCTGGCAG-AAACGTTAT-------T-AT---TTCATTCATACTTGACCATTGTTTGCTCA-GGTTTCAGTACTaaa
gi|3 : AAA--TTG-AAC--TTTC----TTTG------AAAT--A---A-A----------------TAACT-G-GTGATTG-A-A---------------CT---TT---T-------------------------------------------------ACAAA--TA---TAT--GTCATCTTGGAGATTAA--AGTTTCTTT------GA--A-AT
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaATTGAAC-TT--TCTTTGAAA-TA-------------------A----AT--AACT-GGTGA-----TTGAACT----TT-TA--------------------------C----AA---A-------T--A---TA--T------------------G----TCATCTTGG-----AG--ATTAAAG------------------------------------------------T-------T-TCTTTGA--AA---TATAAT------A--ACTAA--A-C--T-----------A--------G-G--T------TT---TATA-TT-TA--A-AATT-GA----TA-CG-TCA---G--T----TC---G------GA-G-ATGATGA-T---------TCGGAAAT----TT-----------T--CATGGAG---A--A--ATA-TA---ATTACATCTAGGCCATCGGGGCGATTGAGT--GAA----------TA--T--T-C------------T--TTGAGA-T-A------C----TT--G--TGTA---TA-A---TTCAACTTTCTTTCAA---A-T-----AT--------ATAC--ATCTGGAT-TGTC-----TAAGA----GAACGAAGTCT---TT-TATG------TATATTTCTTTGAAATA--CA------T---GTA--CAT-AATAGAAAAATCG-----GAGA--TGG-GGT--TTTC----C----------AAT--AGTTA-A-------TA--------AACTT-----AATG-A-C---------------TT---TT---T----------TT--A-----AAT-A------------T---------ATAT-AA--T----------TCAATTTAAAGGC---------------------------TTTT-ATT---TCTTCAGATCATCTTGAATATATTTTTAAATGCA-CGTA-----G----A----AATGT-----AA--TATT-ataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaAACT---GGT----GATTGAA---C---TT-T-TA------CAA-----------ATA--TA------T---GT-------CAT------CTTG-----GAGA--TTA-AAG--TTTC----TTTG------AAAT--A--TA-A----------------TAACT----AAACTA-G-G---------------TT---TTATAT----------TTA-A-----AAT-T------------G---------ATAC---------------GTCAGTTCGGAGA-TGATGA----TTCG------GA--A-ATTTT-ggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|3 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaatACATCTAGGCCATCGGGGCGATTGAGTGAAT-AT--TCTTTGAGA-TACTTGTGT-------A---TA----ATTCAACTT-------------------------------------T------C----TTTC----AA---A-------T--A---TATAC-A-------TC----TGGA----TTGTCTAAG-----AG--AACGAAG--TCTTTTATGTAT---------A------------------------T-------T-TCTTTGA--AA---TAC-ATGTACATA--ATAGA--A-AAATCG--------GA--------G-A--T--GG--GG---T----TT-TC--C-AATA-GT----TA-AT--AA---A--C----TT---A------AT-G-AC------T---------T------T----TT-----------T--TA---AA---T--A-TATA-TA---ATTCAATTTAAA--------------GGCT-----T---T-----TA--T--TTC------------T--TC-AGA-TCAT-----C----TT--G--AATA---T--A---TT----TTT------A---A-------AT--------GCACGTA---GAAA-TGTAATAT-TGGAA-----ATTGAA---C---TT-TATG------TAT-----------ACA--TGAACCTGT---ATA--GAT-CAT------CTTG-----GAGA--TTG-AGT--TGTC----TTTG------AAAT--A--TA-A-------TAT-----TCAACTcatggagaaatataattacatctaggccatcggggcgattgagtgaatattctttgagatacttgtgtataattcaactttctttcaaatatatacatctggattgtctaagagaacgaagtcttttatgtatatttctttgaaatacatgtacataatagaaaaatcggagatggggttttccaatagttaataaacttaatgactttttttaaatatatataattcaatttaaaggcttttatttcttcagatcatcttgaatatatttttaaatgcacgtagaaatgtaatattggaaattgaactttatgtatacatgaacctgtatagatcatcttggagattgagttgtctttgaaatataatattcaact
gi|30 : ggctttcactactcatactatgtttctttcaaaacttttcttgtattctattacaaaacttactacattctttccgtacttactcgtgttatgtttccttgcatgctttctactccagtctagtttaacttcatgtatttacctcattctaataatctagtttcctttcaatacttacttggttcttgttatctgtgtttcttttcattcttacttcaatcttgttatgttacttcatttatttcatttttgttatctatgcttcatactttattattgttatctttgcttcatactgcaatcttgttatctttgtttatttcctactttattaatattaaacataattcattcttactatcttcatttttaatactttcgttaaaatgtcctttaatccataagtctctctaacgccttgaatatatatattttaacgcgtctaagcggttgtgtgataagtgtcaaaattgaactttctttgaaataaataactggtgattgaacttttacaaatatatgtcatcttggagattaaagtttctttgaaatataataactaaactaggttttatatttaaaattgatacgtcagttcggagatgatgattcggaaattttcatggagaaatataattATG------TAC-----------ATA--TA------T---GTC--GAT-CAT------CTGG-----GAGA--TTG-AGT--TATC----TTTG------AATT--A--T
gi|31 : tattggttaagcattggttttatatacAGATCATCTTGGAGAACGATTGAACATT--TTTTTTAAA-TA------T-------A---TA----ATATAACTTAGAGA-----TTcttattt
gi|4 : A----TA-AT-TCA---A--C----TT---C------GACG--------------------------T----CT-----------T--TA---AA---ATAA-TATA-TACAAATTCAGTGTATT--------------GACTCGGAGC---TAACGGTG--T--G-C------------T------GAGC-GT-----CAAAATT--G--AAC----TT-----TC----TCT------G---A-A-----GT--------ACA--------GAA-T-TTAACT-TGG-A----GATTGAG---C---TT-TATT------T--------------TA--AA------T---GTA--TAT-TAT------CTTG-----GAGAT-TTA-AAC--TT------TTTG------ACATGAA--TA----------AT-----TCAACTTA-GATATTT-A-A---------------TT---TT---GCAA-------TTA-A-----AAT-T------------T---------ATAC
gi|4 : tttgttatcttaaatgtttatgc------------------------T-------T-TCTCTGA--AG---TAC-AG------A--ATTTA--A-C--TTG--------GA--------G-AT-T--GAGCTT---TA---TT-TT--A-AATG-TA----T--AT-T-A---T--C----TT---G------GA-G-AT------T---------TAAAC--T----TT-----------T--T----GA---C--A-TGAA-TA---ATTCAACTTAGA----------------------------------------T-A------------T--TT-A-----AT-----T----TT--G--CA-A---TT-A-----------A------A---A-T-----TT--------ATAC------------GTCAGCTGTGAGATAATGGTTGAA---CTTGTT-CATGAAGAAATATAA---------ATA--CA------T---CTA--GAT-CAT------CTTG-----TAGA--TTG-AAA--TTTC----TTTT------AAAT--A--CA-ATGTACATCAT-----TCAACTTG-GAAAATA-C-A---------------CG---TT---T----------TAA-A-----GAT-A------------T---------AT-------TA---CCT---TTAAGTTAGAGATT---------CTTT------GA--A-Agtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaacCTTGGA----GATTGAGC-TT--TATTTTAAA-TG------T-------A---TA------TTATCTTGGAGAT----TTAAACT----T---------------------------TTTG----AC---A-------TGAA---TA--A-T-------TCAACTTAGATATTTAATTTTGC-----AATTAA--AAT--T--TATACGT-C---------A----------------------------------GCTGTGA--GA---TA--AT------G--GTTGA--A-C--TTGTTCATGAAGA--------A-A--T---A--T----------------A-AATA-CATC--TA-GA-TCA---T--C----TT---GTAGATTGA-A-AT------T---------T------C----TT-----------T--TA---AATACA--A-TGTA-CATC-ATTCAACTTGGA--------------AAAT--ACAC---G-----T---------------------T--TT-AAA-G-AT------------------ATA---TT-A---CC----TTT------A---AGTTAGAGATTCTTTGAAACAC--A----TAA-T-TCAACT-TGGAAATT-GATTTAA---T---TT-T-CA------CA------------ATA--TA------T---ATA--CAC-AAG------CCTA-----GGGA--TGT-AAC--T-------TTTT------AAAT--A--TA-T-------AAT-----TCAAATTA-GAGATTA-A-ACTGTTTTTATTTCTTTT---TT---T----------CTT-A-----GAT-A------------T---------ATACATA--TC---TAT--ATCATCTTGGAGAATAA--A----cacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtaactttttaaatatataattcaaattagagattaaactgtttttatttctttttttcttagatatatacatatctatatcatcttggagaataaaggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaaACATCTAGATCATCTTGTAGATTGA---AA--TT--TCTTTTAAA-TA------C-------AATGTACATCATTCAACTTGGAAA-----ATACACG----TT-TT-------------------------------AA---A-------G--A---TA--T------------------A----TTACCTTT--------------AAG--T--TAGAGAT----------------------------------------------TCTTTGA--AA---CAC-AT------A--ATTCA--A-C--TTG--------GA--------A-A--TT-GA--TT---TAAT-TT-TC--ACAATA-TA----TATACACAA---G--C----CT---A------GG-G-AT------G---------TAAC---T----TT-----------T--TA---AA--------TATA-TA---ATTCAAATTAGA--------------GATT--AAAC---T------G--T--T-T------------T--T----A-T-TT-----C----TT------------TT-T---TT----CTT------AGATA-T-----AT--------ACAT--A---TCTA-TATCATCT-TGG-A----GAATAAAGG-T---TT-TATG------TAT-----------A----------------GTC--AATTCAA------TTTG-----GAGA--TTG-AAC--TTCC----TTTA------AAAT--A--CA-T-------AAT-----AGAACTTG-GAGG-TG-A-A---------------TT---TT------------------A-----AAT-A------------G---------AT---AA--T----TTT--A----CTTGAAGATTGA--ggttttatgtatagtcaattcaatttggagattgaacttcctttaaaatacataatagaacttggaggtgaattttaaatagataattttacttgaagattgacattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|4 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatAAC-TT--TTT---AAA-TA------T-------A---TA----ATTCAAATTAGAGA-----TTAAACTGTTTTTATTT-CT------TT------T----TTTCTTAGAT---A-------T--A---TA--CATA------TC----TATA----TCATCTTGG-----AG--AATAAAGG-T--TTTATGTAT---------AGTCAATTCAATTTGGAGATTGAACT-------T-CCTTTAA--AA---TAC-AT------A--ATAGA--A-C--TTG--------GA--------G-G--T--GA--AT---T----TT-----A-AATA-GA----TA-AT-TTT---A--C----TT---G------AA-G-AT------TGACA-----T------T----TT-----------T--TA---AAT--AT-A-TATA-TA---ATTCATTTAAAA--------------GACT--GACC---T-----AT--T--T-C------------T--TT---------------------------------TT-A------------------A---A-T-----AT--------ACAC--A---CGAC-GATTAAAT-TTGGA----GATTGGT---T---TT-CATG------TAT-----------ACC--CA------T---CTG--GAT-CAT------CTTG-----GAGA--TGG-AAT--TGTC----TTTG------AAAT--A--TA-A-------CAT-----TTATCTTcattttttaaatatatatataattcatttaaaagactgacctatttctttttaaatatacacacgacgattaaatttggagattggttttcatgtatacccatctggatcatcttggagatggaattgtctttgaaatataacatttatcttaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|5 : tttgttatcttaaatgtttatgcataattcaacttcgacgtctttaaaataatatatacaaattcagtgtattgactcggagctaacggtgtgctgagcgtcaaaattgaactttctctgaagtacagaatttaacttggagattgagctttattttaaatgtatattatcttggagatttaaactttttgacatgaataattcaacttagatatttaattttgcaattaaaatttatacgtcagctgtgagataatggttgaacttgttcatgaagaaatataaatacatctagatcatcttgtagattgaaatttcttttaaatacaatgtacatcattcaacttggaaaatacacgttttaaagatatattacctttaagttagagattctttgaaacacataattcaacttggaaattgatttaattttcacaatatatatacacaagcctagggatgtATATTTAGACCATCTTGGAGATTGGTTGAAC-TC--TCTTTGAAA-TA------T-------A---TA----ATTCAACTTTGAGA-----TTGATCT----TT-TTTGCT------TTTTTCTTC----TTCC----AA---A-------T--A---TA--C-T-------TC----TAGA----ACATCTTGG-----AG--AACGAAGG-T--TATATGTAT---------A------------------------T-------T-TCTTTGA--AA---TAC-AT------A--ATTTA--A-A--TTA--------GA--------G-A--T--GA--TT---T----TT-TC--A-AATA-GA----TA-AT-TGA---A--C----TT---G------AA-G-AT------T---------T------TCT--TT-----------T--TA---AA---A--A-TATA-TA---ATTCAATTTAAA--------------GACT--GAAC---T-----TG--T--T-C------------T--TT-AGA-TCAT-----C----TT--G--GATA---TT-A---TT----TTT------G---A-T-----AT--------ACAC--A---GAAA-GGTAAACT-TGGGA----GATCGAA---T---TT-TATG------TAT-----------GTA--TA------T---GTA--GAT-CAT------CTTT-----GAAA--TTG-AAC--TATC----TTTG------AAAT--A--TA-G-------CGT-----TTAACTTG-GAGATAA-A-A---------------TT---TT---A----------TTG-A-----AAT-A------------T---------ATACAAA--TA---TCT--ATCGCCTTGGAGACGGT--A----TTGT------AC--A-ATTAT-ATT---TTTAAAA------TTTAACA---TGATAAATAAA-AGTT-----A----A----ACTAT-----AA--TATT-ATACTGTCTTAGGCAT-----TTTGTTGTACCCGTAC-AC---------CGGTTTGTA---A---TTAG-TAACACC------TAA-TAA----AACACTTCCCAATCAGTAGGCTTAT-G--TAATTAACCGGGCTACATCTGACAC-AAACTTAAT-------T-AT---TTCATGTCTTCTTGATCATTGTTTGCCCA-TGTTTCAGTACTTGAAGTACTTTGATaaataatattactgttgttcatcataaccagacaataataatgaaaaaaacattttgtaagcatctgtt
gi|6 : A----TA-AT-TGA---A--C----TT---A------AA-G-AT------T---------TACA---T----TT-----------T--TGT--AA---A--A-TGTA-TA---ATTAAATTTAAA--------------GACA--GAAC---G-----TT--T--T-T------------T--TT-AAA-T-ATAAACAT----TT------ATA---TC-A---TC----TTT------AGAAA-T-----ATGTT-----ACAC--A---GTAA-------------------------------------ATG------TAC-----------ACAG-TAA-----T---GTA--AA-----------CTTG-----GTGA--T-----C--TATG----T---------AGAT----------------CAT---------CTTG-AGGATTG-A-A---------------CT---TTC--T----------TTG-A-----AAA-A------------T---------ATACAAA--TA---TCT--TTCA---------------A----CTGT------GG--A-ATATT-ATG---TT-ACAG------TTAAACA---TTCTCATTAAA-GGTT-----A----ATTAAAGTA------AAATTATT-ATCCTGTCTTCTGCAT-----TTTGTCGTTTCCAAGCAACAA---ACAATGGTTTGTA---A---ATAG-TAATCTCTACATTTAC-TAA----ATATCTTTTC-ATCAGTATGCTAAT-A--AAACGTTCCAGGCTACTTCTG-CAC-ATACTTTAT-------T-AT---TTTGTTTCTACTT
gi|7 : gaatTTTGA--AT---TGC-AT------AGCATT----A-C--TTG--------TA--------T-A--TC-GA--CT---T----TT-T---A-AATA-GA----TA-AA-TGA---A--C----TT---G------AA-G-AC------TGA-------C------A----TT-----------T--CA---AA---A--A-TATA-TA---ATTCAGTTTAAG--------------GATA--GAAC---T-----AT--T--T-C------------TGTTT-AAG-C-ATACA--C----TTTAA--GATAATTTTGA---TT----TTTTTA---A---A-T-----AT--------AAAC--A---GTAA-TGTTAACT-TGG-A----TATTGAT---T---TT-T-----------T-----------ATA--TA------T---AT--------AC------CTT---------A--TTA-GA-----TCA---TGTG------GGAT--A--T----------TGT-----TCGACT---------G------------------------TC---T----------TTG-A-----AAT-A------------T---------A-AC-------------------TCTT------T----A----CTAT------GA--A-ATAGT-ATT---TT-ACTG------TTCAATA---TTCTAAATAAA----T-----A----A----AATA------AAA-TGGT-ACCCTGTCTTATGCAT-----ATTGCTGTACCTATACAACAA---ACAACGGTTTGTATTGAT--ATAG-TAGCCTT------TAC-TAA----ATCTCTTTCC-ATTAGTATGCTTAT-G--TAATGTTCCGGCATACATGTGACAC-AAACTGTAA-------T-AT---cagtacttagtactctatttttttctatcgttataatagtacaccgcttttatagtct
gi|8 : caaaattgagattgaattgta-TT--TTTTTTAAA-TA------TTGTTTGCA---TA----ATTCTACTAGGAGA-----TTGAACA----TT-TTT-CT------agtattt
gi|8 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttAA--CA---TTT--TTCTGCTTAAAGACTGA--A----CTAT------GA--A-AACTT-GTT---TTTACAG------CTAAACA---TTCTAAACAAA----T-----A----A----AACA------AAA-TATT-ATCCTGCCTTATGTAT-----TTTGTCGTACACCTACGATAA---GCATCAATTTGTA---A---ATTG-TAACTTT------TGC-TTT----ATCACTTTCC-ATCAATATGCTTATAA--AAATATTTTGGACTACACTTGACACAAAACTTTAT-------T-AT---TTAATTTCTACTTGACTATTGTTTGCCCT-GATTTTGGTACACTAAGTACTTTGATgcttaaagactgaactatgaaaacttgtttttacagctaaacattctaaacaaataaaacaaaatattatcctgccttatgtattttgtcgtacacctacgataagcatcaatttgtaaattgtaacttttgctttatcactttccatcaatatgcttataaaaatattttggactacacttgacacaaaactttattatttaatttctacttgactattgtttgccctgattttggtacactaagtactttgattttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : aaaagacaaaacaaattatttgtccatacatgtatacgttatatatacatttgcaatttttgcacatattaagcaacagtcattgttttttttttaaatattgtttgcataattctactaggagattg--TTTTTTAAA-TA------T-------A---TC----ATTCAAC---GGGA------TG-----------TTT-AT------TT------C----TTTG----AAACTA-------T--A---TA--C-tttaataaagtcatgggcagatgaaaaaagttgaatgtattcatttaacgtt
gi|9 : ATGTTT---------A------------------------T-------T-TCTTTGA--AACTATAT-AC------A--AT--G--A-C--TTG--------AA--------G-A--A--GT--TT---T----TC-TC--C-AATA-GA----CA-AT-TGA---A--C----TT---GATGACTGA-ACAT------T---------T------T----CT-----------TGTTA---AA---T--A-TACA-TA---------TTTAGA---------------------------------------------------------------A-T-AT-----C----TT--A--GATT---TT-----TT----TTC------A---A-T-----AT--------GCAC--A---CACA-TGTAAACT-TCA-A----GATTTAA---T---TT-------------------------ATG--TA------T---CTA--GAT-CAT------CTTT-----GAGA--TTA-AAC--TGTC----TTTG------AAAT--A--TA-G-------CAT-----TTAA---------------A---------------TT---T----------------------------------------------------ATACAAA--TA---CAT--ATCACCTTGGCGACTGA--A----CTGT------GA--A-AT----ATT---TA-ACA-------TTTAACA---TTTTAAAGAAA-AGTT-----A----G--------------------TT-ATTCTGTTTGATGTAT-----TTTGTTTTACCCACACAACAA---ACAACGGTTTAAA---A---ATAT-TAACCTC------TAC-TAA----ATCACTTTCC-ATCAGTATGCTTAT-T--TAATGTTCCGGGCTACAaatgacttgaagaagtttttctccaatagacaattgaacttgatgactgaacattttcttgttaaatatacatatttagaatatcttagattttttttcaatatgcacacacatgtaaacttcaagatttaatttatgtatctagatcatctttgagattaaactgtctttgaaatatagcatttaaatttatacaaatacatatcaccttggcgactgaactgtgaaatatttaacatttaacattttaaagaaaagttagttattctgtttgatgtattttgttttacccacacaacaaacaacggtttaaaaatattaacctctactaaatcactttccatcagtatgcttatttaatgttccgggctaca
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): GCCTTACAATACTCATTTTATGTTTCTTTTCAAACTTTTCTTGTCATCTATTACAAAACTTAATATTTCATTTTTTGTTTCTTTCCATGCTTACTTCAAACTTCATTCTTGTTTTCTATTTTTCTTTTAATACTTACTTAGTTTTGCTTATGTTTGTTTTTTACTGTACGTTCTTCAATCTTGTTATCTTAATTTCTTTCCAGTCTATCTTGTTTTCTTTGTTCCTTTCCATACTAACTTCATTCTTCTTATTTGTTTCATTTCATACTCACACGCGTGTTGCTATTTACTTCATTTTTCGTACATCATTCTTGTTATTTTTGTGTCACAAACTAAATTCAATCTTACTATTGCTTTTGTTAAAAATTCCTTTAATTC
Unaligned ( gi|12 ): GGCTTATAATACTCGTACTGTATTTCTTTTCAAACTTTTCGTGTTATCGACTACCATCCTTACTTCATTCTTACTTGTTTCCATATTTTCTCCAATCTTATTATCTTTACTTGTTTCTAAACGTACCTCATTCTTGTAATATATCTTTCTTTCCATTTGAATTGGTTGTTGTTATCTTTGCCTGCTTCCATACTTATGTCATTCTAGTTACATACTAACTTTATACTTAATTATTGTTATCTTAAATTATTTCTATACTTACTTGATTATTGTTATCTTGTTATTTCATTCTTTTTATAATTGTTGCACAAACTTAATTTAAATCTACCATCTTCATTCTTACCTTAGATTCATT
Unaligned ( gi|18 ): TACAATACTCATACTAGGTTTCTTTTCATAATTTCCTTGTTATATATTACTCAACTTACATTATTCTTTACTTCTTTCCATACTTACTCCAATCTTGTTATCTTGTTATGCTTCTTTTCATATTTTATTCGTGTAATCTACTTTTCTTTCCATACTAACACGATTATTGTTACATTTGCTTTATTCTATTCTTACTTCATATTTCAATCTTGTTATCTCATTTTATTACATGCGTACTAGATTATTGTTTCCT
Unaligned ( gi|19 ): CTTGGTTCTTGTTAATTTTGTTTCTTTCCATTCTTACTTCAATCTTGTTTTCTATTTTTATTTACCTACTTATTTAATTATTATTGCCTTTGTTTCCTTTCTTTCATACTTGATTCTTCTTATTTTCGTTTTATTTCCTGTTTCTATTATGCTATATAATGCTTTATTTGTTTCACTAACATAATCCATTCTTACTAACTCCATTCATTCTTACCATCTGTTTTCGTTAAACAATTTAATTCATCA
Unaligned ( gi|25 ): ATTCTTGTTATGTTCGTTTTTTCCATTCTTAATTCCATTCAATACCAACATCATTCATGTAATTTAATTTTCTGTCAATACTTACTTGGTCCTTTTTATCTATGTTTCTTTCCATTCTTACTTCATACTTCCAATTTAATTTCTTTCAGTACTAACTTAATTCTTGTTCTCTATATTCTTTCCATACTTA