lowQualScore : 11111 11111111111 1111111111111111111111111111111111111 1111111111111111111111111111
lowQualScore : 1 111 1 55555555 1 3333333 77777777777777777777777777 33333333 111 22222 444444444 222 11 3333333 11 2222222222222 111 3333333 11 1 2222222 11 2222 3333333 00000 1 33333333 1 22 1 222 22 1 222 1 1 4444444444444 11 4444444444444444444444444444444444444444 55 33333 6666 4 22 6666 222 99999999999 4 1 22 11111 11111111 66666666 111 222222222 33333 1 0000000000000000000000000000000000000 111 1 11 111 11 1 22 1 11 44444444444 1 33333 11 1111111111111111111111111111 1 11 11 11 5555555555555555555 111 222222222 11 1 333333 2 1
lowQualScore : 3 4 777 77 1 0 3 5 77777777 3 2 3 0 8888888 3 3 2 66666666666666666666666666 8 8 6 2 33333333 111 66666 000000000 000 33 2222222 66 2 3 3 11 4444444444444 777 9999999 88 5 7777777 4 4 66 2 99 1111 4 2 2222222 4 00000 6 6 5 77777777 5 2 77 2 4 55 55 2 3 111 4 77 7 6 6 111 3 5 3 3 3333333333333 7 2 2 55 3 3 0000000000000000000000000000000000000000 55 33333 3333 0 6 6 11 2222 555 00000000000 0 6 5 2 4 11 7 7 55555 99999999 33333333 777 4 444444444 4 33 99 1 99 0 77 2 77 11111 77 5 8 0 66 44 1111111111111111111111111111111111111 0 888 5 0 6 8 88 222 3 77 5 77 3 0 77 5 55555555555 777 1 3 6 1 6 1 5 0 1 00000 33 4 66 2 4 4444444444444444444444444444 1 0 33 99 1 77 1 4444444444444444444 444 999999999 11 33 0 7 1 888888 88 6 3 5
lowQualScore : . . ... .. . . . . ........ . . . . ....... . . . .......................... . . . . ........ ... ..... ......... ... .. ....... .. . . . .. ............. ... ....... .. . ....... . . .. . .. .... . . ....... . ..... . . . ........ . . .. . . .. .. . . ... . .. . . . ... . . . . ............. . . . .. . . ........................................ .. ..... .... . . . .. .... ... ........... . . . . . .. . . ..... ........ ........ ... . ......... . .. .. . .. . .. . .. ..... .. . . . .. .. ..................................... . ... . . . . .. ... . .. . .. . . .. . ........... ... . . . . . . . . . ..... .. . .. . . ............................ . . .. .. . .. . ................... ... ......... .. .. . . . ...... .. . . .
lowQualScore : 3 0 555 22 8 8 6 6 44444444 0 2 0 0 2222222 0 8 8 44444444444444444444444444 0 0 6 8 33333333 777 00000 555555555 888 88 8888888 88 0 0 2 22 8888888888888 555 0000000 00 0 7777777 0 0 55 5 55 0000 0 5 0000000 0 00000 0 0 0 00000000 5 5 55 5 0 55 55 5 3 000 0 55 0 0 0 000 0 5 3 0 0000000000000 3 0 0 77 0 5 0000000000000000000000000000000000000000 00 00000 0000 0 0 0 00 0000 000 00000000000 0 0 0 5 0 00 3 3 77777 00000000 77777777 333 7 777777777 7 55 22 7 22 1 99 0 99 99999 77 7 4 2 00 22 2222222222222222222222222222222222222 7 000 0 7 7 3 55 000 0 55 5 55 0 2 00 7 44444444444 444 5 5 6 4 6 4 0 0 0 66666 66 0 22 8 2 8888888888888888888888888888 4 0 00 00 0 00 0 0000000000000000000 000 888888888 00 55 0 7 0 333333 77 7 7 0
consensus : AAT-AACAACACNGG---CAGNTAGAAAAAGACTTGGTACCGGAAG---TGGTTTCACGGAGAGCCTGCTTGATCCCACTGGCTGTCCTTCTGATATTCAA-ATTTC-GAA-TAT-GGA-GAAAA--GA-A-AACCAAAGCAGGAAATACGAAATT----A---GGAACACCT---TGG-NNGATTTCCCGAA-----GTAT--AACAGAA--TTGACC-AGTATGTACGAGTTGTTTCNTACT-AAAACCTG--TTCGTGNCNGTAT---GTTTC---N---TACTGAA-TGTTTTAAAAT-TCA---ATTTTTNTNTNNATCGCAACTNCAGCCATAACATGNGCTCNCCCTATAGGTCTGACCTATNTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTCTAAACCTTGGGGCATAAANATTACGTANCNNCTNNCATGNTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGNTGACATTCATCAGCTACATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATANACAGATG-TGTTTTNAAN----CT--GTNCATTTNACATCGATTNTGAAACAAGTTCCTN-CAACNTAAACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTT--TAAATATATATATATATATAT--ATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAAGATGNACGTNTTATATGGTT-NCGTTTCAGCGTAGGAAGTCGATCT-TGCATGCTG--AACGACT-------CAACCTG-CAAAATTTGAAACTATCTGAAATTTNAG--TTA-AT-TNCACTGATAACC--AATCACAGA--CAATAT--TATACATTAATGTA--CC--G--GTCACAAAATAANTTCAATTTGTTTCACATTTTTCT-TCACTTTCGTAATTTTTNACAGCACNGCCTATCAC--------CT-------GTTT-G-----------TTTTTTCCCTCG-TGTATCTGATATCCAGGAGATTGCGATTACTGCTATGAATANNNGATCGATTCNCATTGGTCGAAAAAAGGCGCAAGTAACAATNTCCTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAA-TTGA----A-ANT--ATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGTGATTGCTAATTATAATGTATTTATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAG---AAATAAAGAAA-AG-ATAGT---TTGTTTGAAAAGTGTGGGGTGGAAA-TTTC--GATGTTTGGAGATT-CT-CC-----------NTT---TTTA--------TAT--ATATATGAAT-TAANAAAAAGTT------CGNGACAA-GCCCCTGTGCACTATTTA
Reference ( gi|1 ) : AAT-AACAACACAGA---CAGATAAAAAAAAATTTGGTACC---AT---TAGTTTCACAAAAAGCCTGCTTCATTCTGCTGGCTGTTCTTCTGGTATTCAAAATTTC-GAA-T-TCGGA-GAAAA--GA-A-AACTATAGCAGGAAATACAAAATT----A---GGAACACCT---TGA-GGGATTTCCTGAA-----GTAT--AACAGAA--TTGACCGAGAAGATACGAGTCATTTCTTACT-AAAACCTG--TTTGTGCCTGTAT---GTTTC---A---TACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGTCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCAAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATAACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTTACATTGATTGTGAAACAAGTTCTTA-CAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAAAAAATATATATATATAAAAAATAAA-ATCCTCCCTCCCTCC-CCATTTTTAAAAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCTAAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACC--AATCACAGA--CAATAT--TATACATTAATGTA--CC--G--GTCACAAAATAATTTCAATTTGTTTCACATTTTTCT-TAACTTTAGTAATTTTTCACAGCACTGTCTATT----------CT-------GTTT-G-----------TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAA-TTAA----A-AA---ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTATAGTAACTTGTTTCAAAAGTGTGGGGTGGAAA-GTTT--GATGTCTGGAGATT-CT-CC-----------ATT---TTTA--------TAT--ATATATGAAT-TAAAAAAAAATT------CATGACCATGCCCCTGTGCACTATTTA
gi|7 : AAT-AACAACACAGA---CAGATAAAA-AAAATTTGGTACC---AT---TAGTTTCATAAAAAGCCTGCTTCATTCTGCTGGCTTTTCTTCTGGTATTCAAAATTTC-GAA-T-TCGGA-GAAAA--GA-A-AACTATAGCAGGAAATACAAAATT----A---GGAACACCT---TGG-GGGATCTCCTGAA-----GTAT--AACAGAA--ATGACCGAGAAGATACGAGTCATTTCTTACT-AAAACATG--TTTGTGGCTGTAT---GTTTC---A---T
gi|5 : AATCAATAACACTAA---CAGA-----AAAAGCTTAGTACC---AGAAATGGTTTCATGTAGAGTCAGCTTAATTTCA---GCTGTCCTCCCGACATTCAA--CTTA-AAA-----GAAAGAAAAT-GAGA-AACCAAAGCAGGAAATATTTAATT--------TGTACCCCTCCGTAATTTCATTTCCCCAA------TACCAAGTATAA--TGGAC--AGTATGTACAGGTTATTTCTT-CA-AAAACCTG--ATCATGAAAATAT---GTTCC---T---TA
gi|8 : agttattttattaacccaatttcaatggcatatatatatatataaaagcagcaaactgagctcatatggtaacatgttcgatttgaaaa-AACAACACTGG---CATTTAGAAAAAG-CTGGGTACCGGAAG---TGATTTCACGGAGAGCATGCTTGAC---ACCGGTTGTCCTTCTGACATTCAA---CTCAGAAGTATAAGA-AAAAA--GG-ATAACCAAAGCATGAACTACGAAATT----A---GGAACACCT---TGacctta
gi|4 : cagaggcgcgaccgaggtgagctcatatcgtaccaagcacgttaagtaaatagcCAACAAAGGTGGCAGTTAAAAAAAG-CTTGGTACCGGAAG---TGATTTCACGAAGGTTCTTCTTGACCCCAAT---TGTCCATCTTATATTCAATATTT--GAA-TAT--AA-GAAAACCGG-A-AACCAAATTAAGAAATACGAAATTCGGAATTTGGAACACCT---TG--GTGATTTCCC--------TTAT---ACTGAAGTTTGAC-------GTA--AGTTGTTTCGTACTCAAAACCGG--TTCG---CAATATAAGGTTTC---T---TA--AAA----TTTACAATGTTATATATTTGTATATGTATCATAAC-ACAGCCATAATATGAGCTCATC-------TTTGACCTATATCATATTATtc
gi|15 : taacttgtgtgttgataaaaatAGAAAAAGATT-GGTACCGG-ATG--TGGTTTTATAGGGAGCCTGCTTGATCCTA---GCTGTCCT---GATATTTAA-----C-----T-TGGG---------GA-A-AACTTTAGCAGAATATATGATATT----T---GGAACACCT---TG
gi|12 : cTACAATATT----C---GTAACATCG---TGG-TGAGTTTCTTAAAAGAAAGTAT--GATAGAA--TTGATCCAGTATATATGAGTTGTGTAGTATC-AAAAACTGGTTCTTTTCTTG-AT---GTTTCCTTATGTTACTGAAATGTTTTAATAT-CCT---ATTCTTgt
gi|2 : GAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATAGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTTATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGANN-NNNNNNNNNN----NN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAA
gi|18 : ATCA-ATATA---TCTAAACCTTAGGGCA-AAAAATTATGTATCGACTGCCATGTTTCAT-ATGCAGTTACACCAGTTTTGCACCATGGTA---TTGTTGACATTCATCAGTTACATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|26 : TTACTATGCAGTTAGACCATTTTTGCATCAA
gi|22 : CTGTA---TACAC-GTTA-TGTTTTAAACTTCTCT--GTT-ATTTCACATTGATTGTGAAACAAGTTCTTACCAACTTtgtg
gi|24 : ttacATGATGTTTTTAAA----CTTAATGCATTTGACATCTATTTTGAAACAAGTTCCTC-CAATATAAACAAATt
gi|6 : TTTATTTT--TAAATATATATATATATATAT--ATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAA-ATGTATGTATTATATTGCTAACCTCACAATG-ACCAAG-TGATTTGTACAAGTTACCAATAATT-------CAACTT-----AAGTTAAAACTATTTAAATTCTGAGAATTACATTTAAACTGATAACTGAAATAATATATCTAATATAACATACACTAGTac
gi|2 : AAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACC--AATCACAGA--CAATAT--TATACATTAATGTA--CC--G--GTCACAAAATAATTTCAATTTGTTTCACATTTTTCT-TAACTTTAGTAATTTTTCACAGCACTGTCTATT----------CT-------GTTT-G-----------TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAA-TTAA----A-AA---ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTATAGTAACTTGTTTCAAAAGTGTGGGGTGGAAA-GTTT--GATGTCTGGAGATT-CT-CC-----------ATT---TTTA--------TAT--ATATATGAAT-TAAAAAAAAATT------CATGACCATGCCCCTGTGCACTATTTA
gi|19 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGGTT-GTGTTTCAGCGTGGGAAGTCG-----TGC-TA-TG--AACGAC------------CTGACAAAATTTGAGAGTATCTGACATTTTAG--CCG-A--TCCAC-----ACC--GATTAC--------TGT--TATATATAAGTGCA--C
gi|2 : cTAATAAGC--AATCTCAGA--CAATAT--TATACATTAATGTATCTC--T--GTCACAAAAT-TTTTTAATTTGTCACACATTTTTCT-TCACTTTCTTAATTTTTC
gi|9 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcgC--AAACATGGA--CATTAC--AATGCATTCATATA--CCT-GT-GTCACCAAATAAATTAAATTTGTTTCACATTTTTGT-TCACTTTCGTAATTTCGGACAGTACACCCCATC----------AC-------GCTT-GGTGTGGTTCGTTTTTTTTCCTCACTATATCtaatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|20 : gC--AGTCACAGA--CAAT-T--T-TACACT---------------GTCACAAAATACATTCAATTTGTTTCACAATTTTCTCCAATTTTctaaatataatgtatttatgatacgtttcgaaaactacgtggaactcggttgaaaa
gi|17 : gaatcAC--TATACATTAATGTA--CCTTG--GTCACAAAATAAAATCAATTTGTTTCACATTTTTCT-TCACTTCCGTAAATTTTAACAGCATTGTCTATCACTTTTGGTGCT-------GTTT-G-----------TTTctaattataatgtatgcatgattgat
gi|3 : aATGCACTGATGTA--CC--TTTGTCACCAAATAAATTCATATTATTTCACATTTTTCT-TCACTTTCGTAATATAAGACAGTATAACCTATCACG-------CTTGGTGCGGTTTGG-----------TTTTTTCCCTCG------CT-ATATCCAGGAGATTG---TTACTGC
gi|21 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggc--GTCACAAAATATTTTCAATTTGTTTTACGTTTTTCT-TTACTTTtgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|3 : tcaccaaatgtgatgttagattgtgtcaagatgtgtgatgGAGATTACGAATATTACT--GAATAATTGATCGATTCGCATTGGT--AAAAAAGGCGC-AGTAACAATCTCCTGGagagg
gi|2 : ccgcGAAAAATTACTAAAGTTAAGAAAAATGTGAAACAAA-TTGA----A-ATT--ATTTTGTGACCGG--TACATTAATGTATAATATTGTCTGTGATTGGTTATCAatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatattacgaaagtgaagaaaaatgtgaaataatatgaatttatttggtgacaaaggtacatcagtgcattgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|17 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcacAAAATTTACGGAAGTGAAGAAAAATGTGAAACAAA-TTGATTTT-------ATTTTGTGACCAAGGTACATTAATGTATAGTacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|9 : aAAATTACGAAAGTGAACAAAAATGTGAAACAAATTTAA----T-TT---ATTTGGTGACACAGGTATATGAATGCATTGTAATGTCCATGTTTGCTAAATATAATGTATTTATGAT--A-CGT-T-TCGAAAACTACGTGGAACTCGGTTGAAaacagcattgtctatcacttttggtgctgtttgttt
gi|3 : ggatatagtgaggaaaaaaaacgaaccacaccaagcgtgatggggtgtactgtccgATTACGAAAGTGAAGAAAAATGTGAAATAA---TAT----G-AATTTATTTGGTGACAAAGGTACATCAGTGCATTGAATCGTTCAAGTTTGGTAAATATAATGTATTTATGATCAA-TATGTATCGAAAACTACGTTGAAATTGATTG----AATAGAG---AAAAAAAACAACAG---------TTGTATGAAAAGTGTCGGGTGAAAATGTTCA-GATG--TGGAGATT-CCGCCCTAAGGCTTGTGTT---TTTA--------TATAAATATATAAAT-Taa
gi|21 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcgcagtaacaatctcctggatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatGAAAGTAAAGAAAAACGTAAAACAAA-TTGA----A-AAT--ATTTTGTGACAGAGgttccgggtcaagaccctggg
gi|20 : tcaccaaatgtgatgttagattgtgtcaagatgtgtgatAAATTGGAGAAAATTGTGAAACAAA-TTGA----ATGT---ATTTTGTGACAG-----------TGTA-AA-ATTGTCTGTGACTGCTAATTATAATGTATGCATGATTGAg
gi|23 : gaatcaTATAATGTATTTATGTTCGAT-ATGTATCGAAAAATACGTGGAAATCAGTTGAAt
gi|14 : tgtttacgtttggtaaaATCAATCTG-TATCGAAA-CAACGTTGAAATCGGTTGAATAGATAGA--------AAAGGG-------------TTGTTTAAAAAGTGTTGGGTAGAAA-TTTC--AAAATTTGGTGATTCCT-CT-----------CTTGTGTTTA---------AT--ATAt
gi|11 : gAAAACAACGTTGAAATCTGTTGAATAAATAAA------ACAAA--------ATAGT----TGTTTGCAAAGT-TGGGGTGGACA-TTTT--GAGATTTGGAGAT---T-CC-----------TTT---CTTGTGTGTGTTTAT--ATATGTGAAC-TAACAATATGTT------CGGGACAA-GCCTCa
gi|16 : ttttgttcgatctgtttaaAATAGAGAAAAAA-ATAGT----TGTATGAAAAGTGTGGGGTTGTAA-TTTTCAGATG-------GTT-TT---------------TT---TTTA--------TAT--ATATA--AATGTGCTAAAAAGTTTTTTTTCGAGACAA-GCCCCTGTG-ATTATg
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|10 ): CTATTCATCTTATATTTAACTTAGAGGAGTACAAGAACTACAAAATAACTCAAAGCAGAAAATACTTAATTCAGCGATTTCTCTTATACCCAAGTATGACTGAATTAACTGAGTATGTACAAATTATTTCATACCAAAAACCAGGTTCATAATGGATGTTTTTAACCTTA
Unaligned ( gi|13 ): AACCTTGGTGCCGGAATTAGGATTATCAAGAGTCTGCTTGATAGCAGCTGATATCTTGATATTCAATTTAACAGTAACCGAAAACTGGAAGACAAACAATGAATCAGAATTGAGGAACACTTCT
Unaligned ( gi|25 ): TTTATATATATATAAGAACACAAAATGTTTTTTTCGAGACAGGCCCCTGTGGGTGTATGT
Alignments
lowQualScore : 1 111 22222222 55555555555555555555555555555555555555555555 22222222 1111111 44444444444444444444444 2222 11 111 2222222 1 22 1 111 333 55555 333 33 1 33 1 2222222222 11 4444444444444444444444444444444444444444 7777777777777777777777777777777777777777777777777777777777777777777777777 4444 1 11 99999999999 2 111 1 3 11 6666666666 2222 22 22222222 22 111 77777777777777777777 1 444 33 222 666666666666 11 1 111 111 11 666666666666666666666666666666 111 333333333333333333 111 22222222 11111 2222222222222 1
lowQualScore : 6 1 8 2 888 6 3 77 5 888 22222222 0 99999999999999999999999999999999999999999999 77 0 2 99999999 8888888 77777777777777777777777 4 2 99 1111 99 0 1 77 55 444444 111 4444444 6 0 33 0 777 1 1 22 999 888 1 1 6 1 00000 6 6 777 0 7 1 00 6 1 22 222 1 0 88 1 00 0 0 4 7 1 7 0 1 3333333333 66 1 0 1 0 11 11 0000000000000000000000000000000000000000 3333333333333333333333333333333333333333333333333333333333333333333333333 2222 4 4 4 4 5 3 88 4 4 4 55555555555 0 6 1 0 1 333 2 3 0 3 0 0 3 6 33 5555555555 8888 1 7 22 1 22222222 9 5 1 4 6 33 8 1 3 444 1 1 2 55555555555555555555 0 1 666 6 1 8 7 333 0 11 0 6 0 7 00 1 11 7 7 333 888888888888 88 3 7 5 111 7 7 444 3 888 6 1 4 1 22 4 1 0 444444444444444444444444444444 1 6 666 3 999999999999999999 000 00000000 77 99 33333 3 4444444444444 1 3 6
lowQualScore : . . . . ... . . .. . ... ........ . ............................................ .. . . ........ ....... ....................... . . .. .... .. . . .. .. ...... ... ....... . . .. . ... . . .. ... ... . . . . ..... . . ... . . . .. . . .. ... . . .. . .. . . . . . . . . .......... .. . . . . .. .. ........................................ ......................................................................... .... . . . . . . .. . . . ........... . . . . . ... . . . . . . . . .. .......... .... . . .. . ........ . . . . . .. . . . ... . . . .................... . . ... . . . . ... . .. . . . . .. . .. . . ... ............ .. . . . ... . . ... . ... . . . . .. . . . .............................. . . ... . .................. ... ........ .. .. ..... . ............. . . .
lowQualScore : 0 0 8 2 222 6 0 99 7 444 00000000 5 88888888888888888888888888888888888888888888 22 8 7 11111111 0000000 55555555555555555555555 2 2 22 8888 33 7 0 00 88 888888 777 0000000 7 0 22 0 555 0 0 00 000 000 0 0 7 0 00000 7 7 777 7 3 0 77 7 0 00 777 0 0 00 0 33 7 7 0 3 0 3 0 0 0000000000 22 0 8 0 8 00 88 0000000000000000000000000000000000000000 0000000000000000000000000000000000000000000000000000000000000000000000000 5555 0 0 0 0 5 0 55 0 0 0 00000000000 0 7 0 7 0 000 0 2 5 2 2 0 2 5 88 5555555555 8888 0 0 00 0 00000000 0 0 0 2 7 88 0 0 2 000 0 0 0 88888888888888888888 0 0 000 0 0 3 3 000 7 77 7 7 7 3 77 0 33 3 3 333 333333333333 33 3 3 2 777 8 8 333 6 888 6 4 0 3 99 3 0 4 555555555555555555555555555555 0 7 555 2 333333333333333333 000 77777777 99 22 88888 7 5555555555555 0 3 7
consensus : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGG--TT-TCACGAAGAGCCTGCTTGATTCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC-GAA-TACG-GA---G-AAAA---GA-A---------AAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGA-CCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTG-AACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAGC-A-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTG-CTAAAATTTGAAACTATCTGAAATTTAAGTTAATGTNCACTGATA---ACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTNACTTTCGTAAT---TTTTNACAGCACTGTCTATCAC--------CT-------GTTTG-TTTTTTCCCCCAA-TGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCGATG---AAAATCAAA------------TAATAATTCAT--TCCCTTA-ATCACAATCTCTCGGAAAAATTANGAAA---GTGAAGAAAAATGTGAAACAAATTGAAAATATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATTCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATT-CT-CC-----------GTT---TTTA--------TAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
Reference ( family-2693 ) : AAT-AACAACACNGGCAGNTAGAAAAAGACTTGGTACCGGAAGTGG--TT-TCACGGAGAGCCTGCTTGATCCCACTGGCTGTCCTTCTGATATTCAA-A-TTTC-GAA-TATG-GA---G-AAAA---GA-A---------AAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGNNG----ATTTC-------C------CGAA-----GTATAACAGAA--TTGA-CC-AGTATGTACGAGTTGTTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------NTACTG-AA-TGTTTTAAAAT-TCA---ATTTTTNTNTNNATCGCAACTNCAGCCATAACATGNGCTCNCCCTATAGGTCTGACCTATNTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTCTAAACCTTGGGGCATAAANATTACGTANCNNCTNNCATGNTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGNTGACATTCATCAGCTACATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATANACAGATG-TGTTTTNAAN----CT--GTNCATTTNACATCGATTNTGAAACAAGTTCCT-NCAACNTAAACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTTT----AAATATATATATATATATATATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAAGATGNACGTNTTATATGGTT-NCGTTTCAGCGTAGGAAGTCGATCT-TGCATGCTG--AACGACT-------CAACCTG-C-AAAATTTGAAACTATCTGAAATTTNAGTTAAT-TNCACTGATA---ACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTNACAGCACNGCCTATCAC--------CT-------GTTTG-TTTTTTCCCTC-G-TGTATCTGATATCCAGGAGATTGCGATTACTGCTATGAATANNNGATCGATTCNCATTGGTCGAAAAAAGGCGCAAGTAACAATNTCCTGGTAAATTCTGACCAATG---AAAATCAAA------------TAATAATTCAT--TCCCTTA-ATCACAATCTCTCGGAAAAATTACGAAA---GTGAAGAAAAATGTGAAACAAATTGAAANTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGTGATTGCTAATTATAATGTATTTATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAG---AAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATT-CT-CC-----------NTT---TTTA--------TAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
gi|1 : AAT-AACAACACAGACAGATAAAAAAAAATTTGGTACC---ATTAG--TT-TCACAAAAAGCCTGCTTCATTCTGCTGGCTGTTCTTCTGGTATTCAA-AATTTC-GAA-TTCG-GA---G-AAAA---GA-A---------AAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGAGGG----ATTTC-------C------TGAA-----GTATAACAGAA--TTGA-CCGAGAAGATACGAGTCATTTCTTACT-AAAACCT--GTTTGTGCCTGTAT---GTTTC------ATACTG-AACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAGC-A-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGTCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCAAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATAACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTTACATTGATTGTGAAACAAGTTCTT-ACAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAAAAAATATATATATATAAAAAATAAA-ATCCTCCCTCCCTCC-CCATTTTTAAAAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCTAAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTG-CTAAAATTTGAAACTATCTGAAATTTAAGTTAATGTTCACTGATA---ACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCTAT--T--------CT-------GTTTG-TTTTTTCCCCCAA-TGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATG---AAAATCAAA------------TAATAATTCAT--TCCCTTA-ATCACAATCTCTCGGAAAAATTAAGAAA---GTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATT-CT-CC-----------ATT---TTTA--------TAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTA
gi|10 : CTATTCATCTTATATTTAA---CTTA-GA-----G-GA---GTACAA---GA-ACTACAAAATAACTCAAAGCAGAAAATACTTAATT------------CA------GCG----ATTTCTCTTATAC------CCAA-----GTATGACTGAA--TTAA-CTGAGTATGTACAAATTATTTCATACC-AAAAACCAGGTTCATAATGG-AT---GTTT
gi|11 : TTT-TGTTCGATC-TGTTTAAAAAACAACGTTGAAATCTGTTGAATAAATA------AAACAAA--------A-TAG----TTGTTTGCAAAGT-TGGGGTGGACAT-TTT--GAGATTTGGAGAT---T-CC-----------TTT---CTTGTGTGTGTTTAT--ATATGT--GAAC-TAACAATATG------TT-----CGGGACAA-GCCTCttaacctta
gi|12 : TACAATATT---C----GTAACATCGTGGTGA----GTTTC-------T------TAAAAGAAAGTATGATAGAA--TTGATCC-AGTATATATGAGTTGTGTAGTATC-AAAAACTG-GTTCTTTTCTTGAT---GTTTCCTTATGTTACTGAAA-TGTTTTAATAT-CCT---ATTCTTg
gi|13 : CTTGGTGCCGGAATTAGGATTATCA---AGAGTCTGCTTGATAGCA---GCTGATATCTTGATATTC-A-A-TTT---AA-CA-G-TAACCG-AAAACTGGA-A---------GAC---AAACAATGAAT-CAGAATTG--A----GGAACACTT
gi|14 : aacGATCAATC-TGTATCGAAA-CAACGTTGAAATCGGTTGAATAGATAGA-------------AA-AG-----GG---TTGTTTAAAAAGTGTTGGGTAGAAAT-TTC--AAAATTTGGTGATTCCT-CT-----------CTTGTGTTTA---------AT--ATAct
gi|15 : AGAAAAAGA-TTGGTACCGGATGTGG--TT-TTATAGGGAGCCTGCTTGATC---CTAGCTGTC---CTGATATTTAA-C-T----------TG-G---------G---GA-A---------AAC-TTTAGCAGAATATATGATATT---T----GGAACACCTTGGa
gi|16 : cAATAGAGAAA-AA-AATAGT---T-GTATGAAAAGTGTGGGGTTGTAAT-TTTCAGATGGTT-----TT------------------TT---TTTA--------TAT--ATATA----AATGTGCTAAAAAGTTTTTTTT-----CGAGACAA-GCCCCTGTG-ATTATt
gi|17 : ACTATACAT-TAATGTACCTTG-GTCACAAAATAAAATCAATTTGTTTCACATTTTTCTTCACTTCCGTAAA---TTTTAACAGCATTGTCTATCACTTTTGGTGCT-------GTTTG-TTT
gi|18 : aATCA-ATATA---TCTAAACCTTAGGGCA-AAAAATTATGTATCGACTGCCATGTTTCAT-ATGCAGTTACACCAGTTTTGCACCATGGTA---TTGTTGACATTCATCAGTTACATTT
gi|19 : GGTT-GTGTTTCAGCGTGGGAAGTCG-----TGC-TA-TG--AACG------------ACCTGAC-AAAATTTGAGAGTATCTGACATTTTAGCCGA--TCCAC--------ACCGATTAC------TGTTATATAT-AAGTGCAC
gi|2 : cG-AACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATAGCAACTTTAGC-A-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTTATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGANN-NNNNNNNNNN----NN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAA
gi|2 : AAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTG-CTAAAATTTGAAACTATCTGAAATTTAAGTTAATGTTCACTGATA---ACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCTAT--T--------CT-------GTTTG-TTTTTTCCCCCAA-TGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATG---AAAATCAAA------------TAATAATTCAT--TCCCTTA-ATCACAATCTCTCGGAAAAATTAAGAAA---GTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATT-CT-CC-----------ATT---TTTA--------TAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|20 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAAAA---TTGGAGAAAATTGTGAAACAAATTGAATGTATTTTGTGACAG-----------TGTAAA--ATTGTCTGTGACTGCTAATTATAATGTATGCATGATTGAT
gi|21 : gaat-GTCACAAAATATTTTCAATTTGTTTTACGTTTTTCTTTACTTTCATCACACATCTTGACA
gi|21 : tcaccaaatgtgatgttagattgATGAAA---GTAAAGAAAAACGTAAAACAAATTGAAAATATTTTGTGACAGAGGagagg
gi|22 : tcaccaaatgtgatgttagattgtgtcaagatgtgtgCTGTA---TACAC-GTTA-TGTTTTAAACTTCTCT--GTT-ATTTCACATTGATTGTGAAACAAGTTCTTACCAACTT
gi|23 : ttacTTGGTAAATATAATGTATTTATGTTCGAT-ATGTATCGAAAAATACGTGGAAATCAGTTGAATt
gi|24 : tgtttacgtATGATGTTTTTAAA----CTTAATGCATTTGACATCTATTTTGAAACAAGTTCCT-CCAATATAAACAAAT
gi|25 : ---TTTA--------TAT--ATATATAAGAAC---ACAAAATG------TTTTTTTCGAGACAG-GCCCCTGTGac
gi|26 : TTACTATGCAGTTAGACCATTTTTGCATCAAggtgtatgt
gi|3 : GAGATTACGAATATTACT--GAATAATTGATCGATTCGCATTGGT--AAAAAAGGCGC-AGTAACAATCTCCTGG-ATAT----AGCGAGGGAAAAAACCAAACCGCACCAAGCGTGATAGGTTATACTGTCTTATATTAC----------GAAAGTGAAGAAAAATGTGA--AATAATATG-----AATT-----TATTTGGTGACAAAGGTACATCAGTGCATTGAATCGTTCAAGTTTGGTAAATATAATGTATTTATGATCAAT-ATGTATCGAAAACTACGTTGAAATTGATTG----AATAGAG---A---AAAAAAA-CA-A-CAG----TTGTATGAAAAGTGTCGGGTGAAAATGTTCA-GATG--TGGAGATT-CCGCCCTAAGGCTTGTGTT---TTTA--------TATAAATATAT--AAAT-T--------G------TTC----CGGGTCAA-GACCCTGtgtg
gi|4 : ccgcAATCAACAAAGGTGGCAGTTAAAAAAAG-CTTGGTACCGGAAGTGA--TT-TCACGAAGGTTCTTCTTGACCCCAAT---TGTCCATCTTATATTCAATA-TTT--GAA-TAT--AA---G-AAAACC-GG-A---------AAC-CAAATTAAGAAATACGAAATTCGGAATTTGGAACACCTTGG-TG----ATTTC-------C------C--------TTAT-ACTGAAGTTTGA-C---GTA------AGTTGTTTCGTACTCAAAACCG--GTTCG---CAATATAAGGTTTC------TTA--A-AA----TTTACAATGTTATATATTTGTATATGTATCATAAC-ACAGCCATAATATGAGCTCATC-------TTTGACCTATATCATATTATgg
gi|5 : taacttgtgtgttgataaaAATCAATAACACTAACAG----AAAAAG-CTTAGTACCAGAAATGG--TT-TCATGTAGAGTCAGCTTAATTTCA---GCTGTCCTCCCGACATTCAA-C-TT----AA-AAGA-AA---G-AAAAT--GAGA---------AAC-CAAAGCAGGAAATATTTAATT--------TGTACCCCTCCGTAATTTCATTTC-------CCCAATACCAA-----GTATAATGGA---------C-AGTATGTACAGGTTATTTCTT-CA-AAAACCT--GATCATGAAAATAT---GTTCC------TTA
gi|6 : agttattttattaacccaatttcaatggcatatatatatatataaaagcagcaaactgagctcatatggtaacatgttcgatttgaaaaTTTATTTTT----AAATATATATATATATATATATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAA-ATGTATGTATTATATTGCTAACCTCACAATG-ACCAAGT-GATTTGTACAAGTTACCAATAATT-------CAACTT------AAGTTAAAACTATTTAAATTCTGAG--AAT-TACATTTA-A---ACTGATAACTGA-AATA--ATATATCTAATATAacctta
gi|7 : AAT-AACAACACAGACAGATAAAAAAA-ATTTGGTACC---ATTAG--TT-TCATAAAAAGCCTGCTTCATTCTGCTGGCTTTTCTTCTGGTATTCAA-AATTTC-GAA-TTCG-GA---G-AAAA---GA-A---------AAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGGGGG----ATCTC-------C------TGAA-----GTATAACAGAA--ATGA-CCGAGAAGATACGAGTCATTTCTTACT-AAAACAT--GTTTGTGGCTGTAT---GTTTC------ATacatacactagt
gi|8 : -AACAACACTGGCATTTAGAAAAAG-CTGGGTACCGGAAGTGA--TT-TCACGGAGAGCATGCTTGA---CACCGGTTGTCCTTCTGACATTCAA----CTCAGAAGTATAAGA---A-AAAA---GG-AT--------AAC-CAAAGCATGAACTACGAAATT---A----GGAACACCTTG
gi|9 : cagaggcgcgaccgaggtgagctcatatcgtaccaagcacgttaagtaaatagcTAAA-TACATT-ATATTTAGCAAACATGGACATTACAATGCAT-TCATATACCT-GTGTCACCAAATAAATTAAATTTGTTTCACATTTTTGTTCACTTTCGTAAT---TTCGGACAGTACACCCCATCACG-------CTTGGTGTGGTTCGTTTTTTTTCCTC-ACTATATCtc
gi|9 : gAAATTACGAAA---GTGAACAAAAATGTGAAACAAATTTAATTTATTTGGTGACACAGGTATATGAATGCATTGTAATGTCCATGTTTGCTAAATATAATGTATTTATGAT-----ACGTTTCGAAAACTACGTGGAACTCGGTTGAAtgatacgtttcgaaaactacgtggaactcggttgaaaa
Alignments
lowQualScore : 1 111 111111 555555555555555555555555555555555555 22222222 1111 44444444444444444444444 11 11 111 111111 1 111 1 1 22222 222 11 1 11 1 2222 11 1 2222 1 11 44444444444 1 11 1 11 22222222 11 1 111 2222 111 77777777777777777777 11 111 11 555555555555555555555555555555 111 666666666666666666666 11111 2222222222222 1
lowQualScore : 0 1 8 888 6 1 0 888888 1 1 66 888888888888888888888888888888888888 5 77 0 2 99999999 2 33 4444 77777777777777777777777 4 6 99 11 7 1 77 55 444444 111 999999 2 8 0 777 7 3 3 6 77777 6 6 333 7 88 0 88 88 1 7 7 0 1111 33 5 1 0 0 4444 1 1 1 1 5 1 66 1 1 1 44444444444 5 6 0 11 3 0 3 0 2 3 6 33 99999999 555 1 33 0 55 1 3 3 222 1 4 5 6666 4 1 111 1 77 44444444444444444444 8 8 9 0 6 2 4 7 0 6 0 7 88 6 1 333 3 888 1 1 1 3 22 4 1 0 555555555555555555555555555555 1 6 666 3 999999999999999999999 77 99 33333 3 4444444444444 1 3 6
lowQualScore : . . . ... . . . ...... . . .. .................................... . .. . . ........ . .. .... ....................... . . .. .. . . .. .. ...... ... ...... . . . ... . . . . ..... . . ... . .. . .. .. . . . . .... .. . . . . .... . . . . . . .. . . . ........... . . . .. . . . . . . . .. ........ ... . .. . .. . . . ... . . . .... . . ... . .. .................... . . . . . . . . . . . . .. . . ... . ... . . . . .. . . . .............................. . . ... . ..................... .. .. ..... . ............. . . .
lowQualScore : 0 4 8 222 6 0 4 000000 7 4 00 111111111111111111111111111111111111 0 22 8 7 11111111 5 55 2222 55555555555555555555555 2 3 22 88 2 0 00 88 888888 777 222222 5 8 0 555 3 3 3 7 00000 7 7 333 3 33 0 00 33 0 3 3 0 2222 88 2 0 8 0 5555 0 0 0 0 5 0 55 0 0 0 00000000000 0 7 7 00 2 5 2 2 5 2 5 88 00000000 888 2 88 0 88 0 2 2 000 0 2 7 9999 0 0 777 0 33 22222222222222222222 0 0 2 2 7 5 0 3 7 7 7 3 33 0 0 555 6 888 4 4 0 0 99 3 0 4 222222222222222222222222222222 0 7 555 2 555555555555555555555 99 22 88888 7 5555555555555 0 3 7
consensus : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCTATCAC--------CTTGGTG-GGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAANNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
Reference ( family-2693 ) : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTNCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTNACTTTCGTAAT---TTTTNACAGCACTGTCTATCAC--------CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCGATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTANGAAAGTGAAGAAAAATGTGAAACAAATTGAAAATATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATTCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
gi|1 : AAT-AACAACACAGACAGATAAAAAAAAATTTGGTACC---ATTAGTTTCACAAAAAGCCTGCTTCAT-TCTGCTGGCTGTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGAGGG----ATTTC-------C------TGAA-----GTATAACAGAA--TTGACCGAGAAGATACGAGTCATTTCTTACT-AAAACCT--GTTTGTGCCTGTAT---GTTTC------ATACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGTCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCAAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATAACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTTACATTGATTGTGAAACAAGTTCTT-ACAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAAAAAATATATATATATAAAAAATAAA-ATCCTCCCTCCCTCC-CCATTTTTAAAAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCTAAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCTAT--T--------CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTA
gi|10 : CTATTCATCTTATATTTAA-C-TTAGAGGAG---TACA-A---GAACTACAA---AA-TAACTCAAAGCAGAAAATACTTAATT------------CAGC------G----ATTTCTCTTATAC------CCAA-----GTATGACTGAA--TTAACTGAGTATGTACAAATTATTTCATACC-AAAAACCAGGTTCATAATGG-AT---GTTTT------TAAC
gi|11 : TGTTCGATC-TGTTTAAAAAACAACGTTGAAATCTGTTGAATAAATA------AAACAAA--------A-TAG----TTGTTTGCAAAGT-TGGGGTGGACAT-TTT--GAGATTTGGAGATTCCTTT-CTTGT-----------GTGTGTTTAT--ATATGT--GAAC-TAACAATATG------TT-----CGGGACAA-GCCTCctta
gi|12 : tttTACAATATT---C----GTAACATCGTGGTGA----GTTTC-------T------TAAAAGAAAGTATGATAGAA--TTGATCCAGTATATATGAGTTGTGTAGTATC-AAAAACTG-GTTCTTTTCTTGAT---GTTTCCTTATGTTACTGAAATGTTTTAATAT-CCT---ATTCTTg
gi|13 : CTTGGTGCCGGAATTAGGATTATCAAGAGTCTGCTTGATAGCAGCTGA-TATC---TTGATATTC-A-A-TTT----AA---CA-GTAACCGAA----AACTGGA-AGAC---AAACAATGAAT-CAGAATTG--A----GGAACACTT
gi|14 : aacGATCAATC-TGTATCGAAA-CAACGTTGAAATCGGTTGAATAGATAGA-------------AA-AG-----GG---TTGTTTAAAAAGTGTTGGGTAGAAAT-TTC--AAAATTTGGTGATTC---C-T---CTCTT-------GTGTTTA-AT--ATAct
gi|15 : AGAAAAAGA-TTGGTACCGGATGTGGTTTTATAGGGAGCCTGCTTGAT-C---CTAGCTGTC---CTGATATTTAA-C-TT-------------GG------------G---GA-AAAC-TTTAGCAGAATATATGATATT---T----GGAACACCTTGGa
gi|16 : cAATAGAGAAA-AA-AATAGT---T-GTATGAAAAGTGTGGGGTTGTAAT-TTTCAGATGGTT-----TT-----------------------TTTTTATAT--ATATA----AATGTGCTAAAAAGTTTTTTTT-----CGAGACAA-GCCCCTGTG-ATTATt
gi|17 : ACTATACAT-TAATGTACCTTG-GTCACAAAATAAAATCAATTTGTTTCACATTTTTCTTCACTTCCGTAAA---TTTTAACAGCATTGTCTATCACTTTTGGTGCT-------GTTT-G-TTT
gi|18 : aATCA-ATATA---TCTAAACCTTAGGGCA-AAAAATTATGTATCGACTGCCATGTTTCAT-ATGCAGTTACACCAGTTTTGCACCATGGTA---TTGTTGACATTCATCAGTTACATTT
gi|19 : GGTT-GTGTTTCAGCGTGGGAAGTCG-----TGC-TA-TG--AACGAC------------CTGACAAAATTTGAGAGTATCTGACATTTTAG--CCG-A--TCCAC-----ACCGATTAC------TGTTATATAT-AAGTGCAC
gi|2 : cGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATAGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTTATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGANN-NNNNNNNNNN----NN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAA
gi|2 : AAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCTATT----------CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|20 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAATTGGAGAAAATTGTGAAACAAATTGAATGTATTTTGTGACAG-----------TGTAAA--ATTGTCTGTGACTGCTAATTATAATGTATGCATGATTGAT
gi|21 : gaatca-GTCACAAAATATTTTCAATTTGTTTTACGTTTTTCTTTACTTTCATCACACATCTTGACA-CA--ATCTAACAT--------C
gi|21 : tcaccaaatgtATGAAAGTAAAGAAAAACGTAAAACAAATTGAAAATATTTTGTGACAGAGGagagg
gi|22 : tcaccaaatgtgatgttagattgtgtcaagatgtgtgCTGTA---TACAC-GTTA-TGTTTTAAACTTCTCT--GTT-ATTTCACATTGATTGTGAAACAAGTTCTTACCAACTT
gi|23 : ttacTTGGTAAATATAATGTATTTATGTTCGAT-ATGTATCGAAAAATACGTGGAAATCAGTTGAATt
gi|24 : tgtttacgtATGATGTTTTTAAA----CTTAATGCATTTGACATCTATTTTGAAACAAGTTCCT-CCAATATAAACAAAT
gi|25 : TTTATAT--ATATATAAGAAC---ACAAAATG------TTTTTTTCGAGACAG-GCCCCTGTGac
gi|26 : TTACTATGCAGTTAGACCATTTTTGCATCAAggtgtatgt
gi|3 : GAGATTACGAATATTACT--GAATAATTGATCGATTCGCATTGGT--AAAAAAGGCGC-AGTAACAATCTCCTGGtgtg
gi|3 : ccgcATGCAC-TGATGTACCT-TTGTCACCAAATAAATTCATATTATTTCACATTTTTCTTCACTTTCGTAAT---ATAAGACAGTATAACCTATCACG-------CTTGGTGCGGTTTGG-TTTTTTCCCTCG------CT-ATATCCAGGAGATTG---TTACTGCatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatattacgaaagtgaagaaaaatgtgaaataatatgaatttatttggtgacaaaggtacatcagtgcattgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|3 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcATTACGAAAGTGAAGAAAAATGTGAAATAATATGAATTTATTTGGTGACAAAGGTACATCAGTGCATTGAATCGTTCAAGTTTGGTAAATATAATGTATTTATGATCAAT-ATGTATCGAAAACTACGTTGAAATTGATTG----AATAGAGAA-AAA-AAACAAC-AG----------TTGTATGAAAAGTGTCGGGTGAAAATGTTCA-GATG--TGGAGATTC---CGC---CCTAAGGCTTGTGTTTTTATATAAATATAT--AAAT-T--------G------TTC----CGGGTCAA-GACCCTGtgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|4 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcgcagtaacaatctcctggatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatAATCAACAAAGGTGGCAGTTAAAAAAAG-CTTGGTACCGGAAGTGATTTCACGAAGGTTCTTCTTGAC-CCCAAT---TGTCCATCTTATATTCAATA-TTT---GAA---TAT-AA---GAA----AACC-GG-AAAC-CAAATTAAGAAATACGAAATTCGGAATTTGGAACACCTT-GGTG----ATTTC-------C------C--------TTAT-ACTGAAGTTTGAC---GTA------AGTTGTTTCGTACTCAAAACCG--GTTCG---CAATATAAGGTTTC------TTA--AAA----TTTACAATGTTATATATTTGTATATGTATCATAAC-ACAGCCATAATATGAGCTCATC-------TTTGACCTATATCATATTATgg
gi|5 : taacttgtgtgttgataaaAATCAATAACACTAACAG----AAAAAG-CTTAGTACCAGAAATGGTTTCATGTAGAGTCAGCTTAAT-TTC---AGCTGTCCTCCCGACATTCAA-C-TT-----AA---AAGAAA---GAA----AAT--GAGAAAC-CAAAGCAGGAAATATTTAATT--------TGTACCCCTCCGTAATTTCATTTC-------CCCAATACCAA-----GTATAATG-------GAC--AGTATGTACAGGTTATTTCTT-CA-AAAACCT--GATCATGAAAATAT---GTTCC------TTA
gi|6 : agttattttattaacccaatttcaatggcatatatatatatataaaagcagcaaactgagctcatatggtaacatgttcgatttgaaaaTTTATTTTTA----AATATATATATATATATATATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAA-ATGTATGTATTATATTGCTAACCTCACAATG-ACCAAGT-GATTTGTACAAGTTACCAATAATT-------CAACTT-----AAGTTAAAACTATTTAAATTCTGAGAATTACATTTAAACTGATAACTGA--------AATA--ATATATCTAATATAacctta
gi|7 : AAT-AACAACACAGACAGATAAAAAAA-ATTTGGTACC---ATTAGTTTCATAAAAAGCCTGCTTCAT-TCTGCTGGCTTTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGGGGG----ATCTC-------C------TGAA-----GTATAACAGAA--ATGACCGAGAAGATACGAGTCATTTCTTACT-AAAACAT--GTTTGTGGCTGTAT---GTTTC------acatacactagt
gi|8 : CAACAACACTGGCATTTAGAAAAAG-CTGGGTACCGGAAGTGATTTCACGGAGAGCATGCTTGA----CACCGGTTGTCCTTCTGACATTCAA----CTCA-GAAGTATAAGAA---AAA----AG---GA-TAAC-CAAAGCATGAACTACGAAATT---A----GGAACACCTTGat
gi|9 : cagaggcgcgaccgaggtgagctcatatcgtaccaagcacgttaagtaaatagCATGGACATTACAATGCAT-TCATATACCT-GTGTCACCAAATAAATTAAATTTGTTTCACATTTTTGTTCACTTTCGTAAT---TTCGGACAGTACACCCCATCACG-------CTTGGTGTGGTTC-GTTTTTTTTCCTCACTATATCtc
gi|9 : gAAATTACGAAAGTGAACAAAAATGTGAAACAAATTTAATTTATTTGGTGACACAGGTATATGAATGCATTGTAATGTCCATGTTTGCTAAATATAATGTATTTATGAT-----ACGTTTCGAAAACTACGTGGAACTCGGTTGAAtttgctaaatataatgtatttatgatacgtttcgaaaactacgtggaactcggttgaaaa
Alignments
lowQualScore : 1 111 111111 555555555555555555555555555555555555 22222222 1111 44444444444444444444444 11 11 111 111111 1 111 1 1 22222 222 11 1 11 1 2222 11 1 2222 1 11 44444444444 1 11 1 11 22222222 11 1 111 2222 111 111 4444444444444 11 11 555555555555555555555555555555 111 666666666666666666666 11111 2222222222222 1
lowQualScore : 0 1 8 888 6 1 0 888888 1 1 66 888888888888888888888888888888888888 5 77 0 2 99999999 2 33 4444 77777777777777777777777 4 6 99 11 7 1 77 55 444444 111 999999 2 8 0 777 7 3 3 6 77777 6 6 333 7 88 0 88 88 1 7 7 0 1111 33 5 1 0 0 4444 1 1 1 1 5 1 66 1 1 1 44444444444 5 6 0 11 3 0 3 0 2 3 6 33 99999999 555 1 33 0 55 1 3 3 222 1 4 5 6666 1 1 111 1 77 111 0000000000000 8 8 9 0 6 2 1 7 0 6 0 7 88 1 999 3 888 1 1 1 1 22 4 1 0 555555555555555555555555555555 1 6 666 3 999999999999999999999 77 99 33333 3 4444444444444 1 3 6
lowQualScore : . . . ... . . . ...... . . .. .................................... . .. . . ........ . .. .... ....................... . . .. .. . . .. .. ...... ... ...... . . . ... . . . . ..... . . ... . .. . .. .. . . . . .... .. . . . . .... . . . . . . .. . . . ........... . . . .. . . . . . . . .. ........ ... . .. . .. . . . ... . . . .... . . ... . .. ... ............. . . . . . . . . . . . . .. . ... . ... . . . . .. . . . .............................. . . ... . ..................... .. .. ..... . ............. . . .
lowQualScore : 0 4 8 222 6 0 4 000000 7 4 00 111111111111111111111111111111111111 0 22 8 7 11111111 5 55 2222 55555555555555555555555 2 3 22 88 2 0 00 88 888888 777 222222 5 8 0 555 3 3 3 7 00000 7 7 333 3 33 0 00 33 0 3 3 0 2222 88 2 0 8 0 5555 0 0 0 0 5 0 55 0 0 0 00000000000 0 7 7 00 2 5 2 2 5 2 5 88 00000000 888 2 88 0 88 2 2 2 000 0 2 7 9999 0 0 777 0 33 777 3333333333333 0 0 2 2 7 5 0 3 7 7 7 3 33 0 333 6 888 4 4 0 0 99 3 0 4 222222222222222222222222222222 0 7 555 2 555555555555555555555 99 22 88888 7 5555555555555 0 3 7
consensus : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAANNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
Reference ( family-2693 ) : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCAC-CTTGGTG-GGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAANNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
gi|1 : AAT-AACAACACAGACAGATAAAAAAAAATTTGGTACC---ATTAGTTTCACAAAAAGCCTGCTTCAT-TCTGCTGGCTGTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGAGGG----ATTTC-------C------TGAA-----GTATAACAGAA--TTGACCGAGAAGATACGAGTCATTTCTTACT-AAAACCT--GTTTGTGCCTGTAT---GTTTC------ATACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGTCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCAAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATAACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTTACATTGATTGTGAAACAAGTTCTT-ACAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAAAAAATATATATATATAAAAAATAAA-ATCCTCCCTCCCTCC-CCATTTTTAAAAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCTAAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---AT--T-CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTA
gi|10 : CTATTCATCTTATATTTAA-C-TTAGAGGAG---TACA-A---GAACTACAA---AA-TAACTCAAAGCAGAAAATACTTAATT------------CAGC------G----ATTTCTCTTATAC------CCAA-----GTATGACTGAA--TTAACTGAGTATGTACAAATTATTTCATACC-AAAAACCAGGTTCATAATGG-AT---GTTTT------TAAC
gi|11 : TGTTCGATC-TGTTTAAAAAACAACGTTGAAATCTGTTGAATAAATA------AAACAAA--------A-TAG----TTGTTTGCAAAGT-TGGGGTGGACAT-TTT--GAGATTTGGAGATTCCTTT-CTTGT-----------GTGTGTTTAT--ATATGT--GAAC-TAACAATATG------TT-----CGGGACAA-GCCTCctta
gi|12 : tttTACAATATT---C----GTAACATCGTGGTGA----GTTTC-------T------TAAAAGAAAGTATGATAGAA--TTGATCCAGTATATATGAGTTGTGTAGTATC-AAAAACTG-GTTCTTTTCTTGAT---GTTTCCTTATGTTACTGAAATGTTTTAATAT-CCT---ATTCTTg
gi|13 : CTTGGTGCCGGAATTAGGATTATCAAGAGTCTGCTTGATAGCAGCTGA-TATC---TTGATATTC-A-A-TTT----AA---CA-GTAACCGAA----AACTGGA-AGAC---AAACAATGAAT-CAGAATTG--A----GGAACACTT
gi|14 : aacGATCAATC-TGTATCGAAA-CAACGTTGAAATCGGTTGAATAGATAGA-------------AA-AG-----GG---TTGTTTAAAAAGTGTTGGGTAGAAAT-TTC--AAAATTTGGTGATTC---C-T---CTCTT-------GTGTTTA-AT--ATAct
gi|15 : AGAAAAAGA-TTGGTACCGGATGTGGTTTTATAGGGAGCCTGCTTGAT-C---CTAGCTGTC---CTGATATTTAA-C-TT-------------GG------------G---GA-AAAC-TTTAGCAGAATATATGATATT---T----GGAACACCTTGGa
gi|16 : cAATAGAGAAA-AA-AATAGT---T-GTATGAAAAGTGTGGGGTTGTAAT-TTTCAGATGGTT-----TT-----------------------TTTTTATAT--ATATA----AATGTGCTAAAAAGTTTTTTTT-----CGAGACAA-GCCCCTGTG-ATTATt
gi|17 : ACTATACAT-TAATGTACCTTG-GTCACAAAATAAAATCAATTTGTTTCACATTTTTCTTCACTTCCGTAAA---TTTTAACAGCATTGTCT---ATCACTTTTGGTGCTGTTT-G-TTT
gi|18 : aATCA-ATATA---TCTAAACCTTAGGGCA-AAAAATTATGTATCGACTGCCATGTTTCAT-ATGCAGTTACACCAGTTTTGCACCATGGTA---TTGTTGACATTCATCAGTTACATTT
gi|19 : GGTT-GTGTTTCAGCGTGGGAAGTCG-----TGC-TA-TG--AACGAC------------CTGACAAAATTTGAGAGTATCTGACATTTTAG--CCG-A--TCCAC-----ACCGATTAC------TGTTATATAT-AAGTGCAC
gi|2 : cGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATAGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTTATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGANN-NNNNNNNNNN----NN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAA
gi|2 : AAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---ATT---CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|20 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAAAATTGGAGAAAATTGTGAAACAAATTGAATGTATTTTGTGACAG-----------TGTAAA--ATTGTCTGTGACTGCTAATTATAATGTATGCATGATTGAT
gi|21 : gaat-GTCACAAAATATTTTCAATTTGTTTTACGTTTTTCTTTACTTTCATCACACATCTTGACA-CA--ATCTAACATCACATTTGGTG-
gi|21 : tATGAAAGTAAAGAAAAACGTAAAACAAATTGAAAATATTTTGTGACAGAGGagagg
gi|22 : tcaccaaatgtgatgttagattgtgtcaagatgtgtgCTGTA---TACAC-GTTA-TGTTTTAAACTTCTCT--GTT-ATTTCACATTGATTGTGAAACAAGTTCTTACCAACTT
gi|23 : ttacTTGGTAAATATAATGTATTTATGTTCGAT-ATGTATCGAAAAATACGTGGAAATCAGTTGAATt
gi|24 : tgtttacgtATGATGTTTTTAAA----CTTAATGCATTTGACATCTATTTTGAAACAAGTTCCT-CCAATATAAACAAAT
gi|25 : TTTATAT--ATATATAAGAAC---ACAAAATG------TTTTTTTCGAGACAG-GCCCCTGTGac
gi|26 : TTACTATGCAGTTAGACCATTTTTGCATCAAggtgtatgt
gi|3 : GAGATTACGAATATTACT--GAATAATTGATCGATTCGCATTGGT--AAAAAAGGCGC-AGTAACAATCTCCTGGtgtg
gi|3 : ccgcATGCAC-TGATGTACCT-TTGTCACCAAATAAATTCATATTATTTCACATTTTTCTTCACTTTCGTAAT---ATAAGACAGTATAACCT---ATCACGCTTGGTGCGGTTTGG-TTTTTTCCCTCG------CT-ATATCCAGGAGATTG---TTACTGCatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatattacgaaagtgaagaaaaatgtgaaataatatgaatttatttggtgacaaaggtacatcagtgcattgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|3 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcATTACGAAAGTGAAGAAAAATGTGAAATAATATGAATTTATTTGGTGACAAAGGTACATCAGTGCATTGAATCGTTCAAGTTTGGTAAATATAATGTATTTATGATCAAT-ATGTATCGAAAACTACGTTGAAATTGATTG----AATAGAGAA-AAA-AAACAAC-AG----------TTGTATGAAAAGTGTCGGGTGAAAATGTTCA-GATG--TGGAGATTC---CGC---CCTAAGGCTTGTGTTTTTATATAAATATAT--AAAT-T--------G------TTC----CGGGTCAA-GACCCTGtgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|4 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcgcagtaacaatctcctggatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatAATCAACAAAGGTGGCAGTTAAAAAAAG-CTTGGTACCGGAAGTGATTTCACGAAGGTTCTTCTTGAC-CCCAAT---TGTCCATCTTATATTCAATA-TTT---GAA---TAT-AA---GAA----AACC-GG-AAAC-CAAATTAAGAAATACGAAATTCGGAATTTGGAACACCTT-GGTG----ATTTC-------C------C--------TTAT-ACTGAAGTTTGAC---GTA------AGTTGTTTCGTACTCAAAACCG--GTTCG---CAATATAAGGTTTC------TTA--AAA----TTTACAATGTTATATATTTGTATATGTATCATAAC-ACAGCCATAATATGAGCTCATC-------TTTGACCTATATCATATTATgg
gi|5 : taacttgtgtgttgataaaAATCAATAACACTAACAG----AAAAAG-CTTAGTACCAGAAATGGTTTCATGTAGAGTCAGCTTAAT-TTC---AGCTGTCCTCCCGACATTCAA-C-TT-----AA---AAGAAA---GAA----AAT--GAGAAAC-CAAAGCAGGAAATATTTAATT--------TGTACCCCTCCGTAATTTCATTTC-------CCCAATACCAA-----GTATAATG-------GAC--AGTATGTACAGGTTATTTCTT-CA-AAAACCT--GATCATGAAAATAT---GTTCC------TTA
gi|6 : agttattttattaacccaatttcaatggcatatatatatatataaaagcagcaaactgagctcatatggtaacatgttcgatttgaaaaTTTATTTTTA----AATATATATATATATATATATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAA-ATGTATGTATTATATTGCTAACCTCACAATG-ACCAAGT-GATTTGTACAAGTTACCAATAATT-------CAACTT-----AAGTTAAAACTATTTAAATTCTGAGAATTACATTTAAACTGATAACTGA--------AATA--ATATATCTAATATAacctta
gi|7 : AAT-AACAACACAGACAGATAAAAAAA-ATTTGGTACC---ATTAGTTTCATAAAAAGCCTGCTTCAT-TCTGCTGGCTTTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGGGGG----ATCTC-------C------TGAA-----GTATAACAGAA--ATGACCGAGAAGATACGAGTCATTTCTTACT-AAAACAT--GTTTGTGGCTGTAT---GTTTC------acatacactagt
gi|8 : CAACAACACTGGCATTTAGAAAAAG-CTGGGTACCGGAAGTGATTTCACGGAGAGCATGCTTGA----CACCGGTTGTCCTTCTGACATTCAA----CTCA-GAAGTATAAGAA---AAA----AG---GA-TAAC-CAAAGCATGAACTACGAAATT---A----GGAACACCTTGat
gi|9 : cagaggcgcgaccgaggtgagctcatatcgtaccaagcacgttaagtaaatagCATGGACATTACAATGCAT-TCATATACCT-GTGTCACCAAATAAATTAAATTTGTTTCACATTTTTGTTCACTTTCGTAAT---TTCGGACAGTACACCCC---ATCACGCTTGGTGTGGTTC-GTTTTTTTTCCTCACTATATCtc
gi|9 : gAAATTACGAAAGTGAACAAAAATGTGAAACAAATTTAATTTATTTGGTGACACAGGTATATGAATGCATTGTAATGTCCATGTTTGCTAAATATAATGTATTTATGAT-----ACGTTTCGAAAACTACGTGGAACTCGGTTGAAtttgctaaatataatgtatttatgatacgtttcgaaaactacgtggaactcggttgaaaa
Alignments
lowQualScore : 1 111 111111 555555555555555555555555555555555555 22222222 1111 44444444444444444444444 11 11 111 111111 1 111 1 1 22222 222 11 1 11 1 2222 11 1 2222 1 11 44444444444 1 11 1 11 22222222 11 1 111 2222 111 111 111 11 111 11 555555555555555555555555555555 111 666666666666666666666 11111 2222222222222 1
lowQualScore : 0 1 8 888 6 1 0 888888 1 1 66 888888888888888888888888888888888888 5 77 0 2 99999999 2 33 4444 77777777777777777777777 4 6 99 11 7 1 77 55 444444 111 999999 2 8 0 777 7 3 3 6 77777 6 6 333 7 88 0 88 88 1 7 7 0 1111 33 5 1 0 0 4444 1 1 1 1 5 1 66 1 1 1 44444444444 5 6 0 11 3 0 3 0 2 3 6 33 99999999 555 1 33 0 55 1 3 3 222 1 4 5 6666 1 1 111 1 77 111 000 9999999 8 8 9 0 6 2 1 7 0 6 0 7 88 1 1 222 0 0 1 3 888 1 1 1 1 22 4 1 0 555555555555555555555555555555 1 6 666 3 999999999999999999999 77 99 33333 3 4444444444444 1 3 6
lowQualScore : . . . ... . . . ...... . . .. .................................... . .. . . ........ . .. .... ....................... . . .. .. . . .. .. ...... ... ...... . . . ... . . . . ..... . . ... . .. . .. .. . . . . .... .. . . . . .... . . . . . . .. . . . ........... . . . .. . . . . . . . .. ........ ... . .. . .. . . . ... . . . .... . . ... . .. ... ... ....... . . . . . . . . . . . . .. . . ... . . . . ... . . . . .. . . . .............................. . . ... . ..................... .. .. ..... . ............. . . .
lowQualScore : 0 4 8 222 6 0 4 000000 7 4 00 111111111111111111111111111111111111 0 22 8 7 11111111 5 55 2222 55555555555555555555555 2 3 22 88 2 0 00 88 888888 777 222222 5 8 0 555 3 3 3 7 00000 7 7 333 3 33 0 00 33 0 3 3 0 2222 88 2 0 8 0 5555 0 0 0 0 5 0 55 0 0 0 00000000000 0 7 7 00 2 5 2 2 5 2 5 88 00000000 888 2 88 0 88 2 2 2 000 0 2 7 9999 0 0 777 0 33 777 888 5555555 0 0 2 2 7 5 0 3 7 7 7 3 33 4 4 666 6 8 4 6 888 4 4 0 0 99 3 0 4 222222222222222222222222222222 0 7 555 2 555555555555555555555 99 22 88888 7 5555555555555 0 3 7
consensus : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAATNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
Reference ( family-2693 ) : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAANNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
gi|1 : AAT-AACAACACAGACAGATAAAAAAAAATTTGGTACC---ATTAGTTTCACAAAAAGCCTGCTTCAT-TCTGCTGGCTGTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGAGGG----ATTTC-------C------TGAA-----GTATAACAGAA--TTGACCGAGAAGATACGAGTCATTTCTTACT-AAAACCT--GTTTGTGCCTGTAT---GTTTC------ATACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGTCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCAAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATAACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTTACATTGATTGTGAAACAAGTTCTT-ACAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAAAAAATATATATATATAAAAAATAAA-ATCCTCCCTCCCTCC-CCATTTTTAAAAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCTAAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---ATT---CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTA
gi|10 : CTATTCATCTTATATTTAA-C-TTAGAGGAG---TACA-A---GAACTACAA---AA-TAACTCAAAGCAGAAAATACTTAATT------------CAGC------G----ATTTCTCTTATAC------CCAA-----GTATGACTGAA--TTAACTGAGTATGTACAAATTATTTCATACC-AAAAACCAGGTTCATAATGG-AT---GTTTT------TAAC
gi|11 : TGTTCGATC-TGTTTAAAAAACAACGTTGAAATCTGTTGAATAAATA------AAACAAA--------A-TAG----TTGTTTGCAAAGT-TGGGGTGGACAT-TTT--GAGATTTGGAGATTCCTTT-CTTGT-----------GTGTGTTTAT--ATATGT--GAAC-TAACAATATG------TT-----CGGGACAA-GCCTCctta
gi|12 : tttTACAATATT---C----GTAACATCGTGGTGA----GTTTC-------T------TAAAAGAAAGTATGATAGAA--TTGATCCAGTATATATGAGTTGTGTAGTATC-AAAAACTG-GTTCTTTTCTTGAT---GTTTCCTTATGTTACTGAAATGTTTTAATAT-CCT---ATTCTTg
gi|13 : CTTGGTGCCGGAATTAGGATTATCAAGAGTCTGCTTGATAGCAGCTGA-TATC---TTGATATTC-A-A-TTT----AA---CA-GTAACCGAA----AACTGGA-AGAC---AAACAATGAAT-CAGAATTG--A----GGAACACTT
gi|14 : aacGATCAATC-TGTATCGAAA-CAACGTTGAAATCGGTTGAATAGATAGA-------------AA-AG-----GG---TTGTTTAAAAAGTGTTGGGTAGAAAT-TTC--AAAATTTGGTGATTC---C-T---CTCTT-------GTGTTTA-AT--ATAct
gi|15 : AGAAAAAGA-TTGGTACCGGATGTGGTTTTATAGGGAGCCTGCTTGAT-C---CTAGCTGTC---CTGATATTTAA-C-TT-------------GG------------G---GA-AAAC-TTTAGCAGAATATATGATATT---T----GGAACACCTTGGa
gi|16 : cAATAGAGAAA-AA-AATAGT---T-GTATGAAAAGTGTGGGGTTGTAAT-TTTCAGATGGTT-----TT-----------------------TTTTTATAT--ATATA----AATGTGCTAAAAAGTTTTTTTT-----CGAGACAA-GCCCCTGTG-ATTATt
gi|17 : ACTATACAT-TAATGTACCTTG-GTCACAAAATAAAATCAATTTGTTTCACATTTTTCTTCACTTCCGTAAA---TTTTAACAGCATTGTCT---ATCACTTTTGGTGCTGTTT-G-TTT
gi|18 : aATCA-ATATA---TCTAAACCTTAGGGCA-AAAAATTATGTATCGACTGCCATGTTTCAT-ATGCAGTTACACCAGTTTTGCACCATGGTA---TTGTTGACATTCATCAGTTACATTT
gi|19 : GGTT-GTGTTTCAGCGTGGGAAGTCG-----TGC-TA-TG--AACGAC------------CTGACAAAATTTGAGAGTATCTGACATTTTAG--CCG-A--TCCAC-----ACCGATTAC------TGTTATATAT-AAGTGCAC
gi|2 : cGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATAGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTTATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGANN-NNNNNNNNNN----NN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAA
gi|2 : AAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---ATT---CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAAAA-ATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|20 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAAAATTGGAGAAAATTGTGAAACAAATTGAATGTATTTTGTGACAG-----------TGTAAA--ATTGTCTGTGACTGCTAATTATAATGTATGCATGATTGAT
gi|21 : gaat-GTCACAAAATATTTTCAATTTGTTTTACGTTTTTCTTTACTTTCATCACACATCTTGACA-CA--ATCTAACATCACATTTGGTG
gi|22 : tCTGTA---TACAC-GTTA-TGTTTTAAACTTCTCT--GTT-ATTTCACATTGATTGTGAAACAAGTTCTTACCAACTTagagg
gi|23 : ttacTTGGTAAATATAATGTATTTATGTTCGAT-ATGTATCGAAAAATACGTGGAAATCAGTTGAATt
gi|24 : tgtttacgtATGATGTTTTTAAA----CTTAATGCATTTGACATCTATTTTGAAACAAGTTCCT-CCAATATAAACAAAT
gi|25 : TTTATAT--ATATATAAGAAC---ACAAAATG------TTTTTTTCGAGACAG-GCCCCTGTGac
gi|26 : TTACTATGCAGTTAGACCATTTTTGCATCAAggtgtatgt
gi|3 : GAGATTACGAATATTACT--GAATAATTGATCGATTCGCATTGGT--AAAAAAGGCGC-AGTAACAATCTCCTGGtgtg
gi|3 : ccgcATGCAC-TGATGTACCT-TTGTCACCAAATAAATTCATATTATTTCACATTTTTCTTCACTTTCGTAAT---ATAAGACAGTATAACCT---ATCACGCTTGGTGCGGTTTGG-TTTTTTCCCTCG------CT-ATATCCAGGAGATTG---TTACTGCatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatattacgaaagtgaagaaaaatgtgaaataatatgaatttatttggtgacaaaggtacatcagtgcattgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|3 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcATTACGAAAGTGAAGAAAAATGTGAAATAATATGAATTTATTTGGTGACAAAGGTACATCAGTGCATTGAATCGTTCAAGTTTGGTAAATATAATGTATTTATGATCAAT-ATGTATCGAAAACTACGTTGAAATTGATTG----AATAGAGAA-AAA-AAACAAC-AG----------TTGTATGAAAAGTGTCGGGTGAAAATGTTCA-GATG--TGGAGATTC---CGC---CCTAAGGCTTGTGTTTTTATATAAATATAT--AAAT-T--------G------TTC----CGGGTCAA-GACCCTGtgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|4 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcgcagtaacaatctcctggatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatAATCAACAAAGGTGGCAGTTAAAAAAAG-CTTGGTACCGGAAGTGATTTCACGAAGGTTCTTCTTGAC-CCCAAT---TGTCCATCTTATATTCAATA-TTT---GAA---TAT-AA---GAA----AACC-GG-AAAC-CAAATTAAGAAATACGAAATTCGGAATTTGGAACACCTT-GGTG----ATTTC-------C------C--------TTAT-ACTGAAGTTTGAC---GTA------AGTTGTTTCGTACTCAAAACCG--GTTCG---CAATATAAGGTTTC------TTA--AAA----TTTACAATGTTATATATTTGTATATGTATCATAAC-ACAGCCATAATATGAGCTCATC-------TTTGACCTATATCATATTATgg
gi|5 : taacttgtgtgttgataaaAATCAATAACACTAACAG----AAAAAG-CTTAGTACCAGAAATGGTTTCATGTAGAGTCAGCTTAAT-TTC---AGCTGTCCTCCCGACATTCAA-C-TT-----AA---AAGAAA---GAA----AAT--GAGAAAC-CAAAGCAGGAAATATTTAATT--------TGTACCCCTCCGTAATTTCATTTC-------CCCAATACCAA-----GTATAATG-------GAC--AGTATGTACAGGTTATTTCTT-CA-AAAACCT--GATCATGAAAATAT---GTTCC------TTA
gi|6 : agttattttattaacccaatttcaatggcatatatatatatataaaagcagcaaactgagctcatatggtaacatgttcgatttgaaaaTTTATTTTTA----AATATATATATATATATATATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAA-ATGTATGTATTATATTGCTAACCTCACAATG-ACCAAGT-GATTTGTACAAGTTACCAATAATT-------CAACTT-----AAGTTAAAACTATTTAAATTCTGAGAATTACATTTAAACTGATAACTGA--------AATA--ATATATCTAATATAacctta
gi|7 : AAT-AACAACACAGACAGATAAAAAAA-ATTTGGTACC---ATTAGTTTCATAAAAAGCCTGCTTCAT-TCTGCTGGCTTTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGGGGG----ATCTC-------C------TGAA-----GTATAACAGAA--ATGACCGAGAAGATACGAGTCATTTCTTACT-AAAACAT--GTTTGTGGCTGTAT---GTTTC------acatacactagt
gi|8 : CAACAACACTGGCATTTAGAAAAAG-CTGGGTACCGGAAGTGATTTCACGGAGAGCATGCTTGA----CACCGGTTGTCCTTCTGACATTCAA----CTCA-GAAGTATAAGAA---AAA----AG---GA-TAAC-CAAAGCATGAACTACGAAATT---A----GGAACACCTTGat
gi|9 : cagaggcgcgaccgaggtgagctcatatcgtaccaagcacgttaagtaaatagCATGGACATTACAATGCAT-TCATATACCT-GTGTCACCAAATAAATTAAATTTGTTTCACATTTTTGTTCACTTTCGTAAT---TTCGGACAGTACACCCC---ATCACGCTTGGTGTGGTTC-GTTTTTTTTCCTCACTATATCtc
gi|9 : gAAATTACGAAAGTGAACAAAAATGTGAAACAAATTTAATTTATTTGGTGACACAGGTATATGAATGCATTGTAATGTCCATGTTTGCTAAATATAATGTATTTATGAT-----ACGTTTCGAAAACTACGTGGAACTCGGTTGAAtttgctaaatataatgtatttatgatacgtttcgaaaactacgtggaactcggttgaaaa
Alignments
lowQualScore : 1 111 111111 555555555555555555555555555555555555 22222222 1111 44444444444444444444444 11 11 111 111111 1 111 1 1 22222 222 11 1 11 1 2222 11 1 2222 1 11 44444444444 1 11 1 11 22222222 11 1 111 2222 111 111 111 11 111 11 555555555555555555555555555555 111 666666666666666666666 11111 2222222222222 1
lowQualScore : 0 1 8 888 6 1 0 888888 1 1 66 888888888888888888888888888888888888 5 77 0 2 99999999 2 33 4444 77777777777777777777777 4 6 99 11 7 1 77 55 444444 111 999999 2 8 0 777 7 3 3 6 77777 6 6 333 7 88 0 88 88 1 7 7 0 1111 33 5 1 0 0 4444 1 1 1 1 5 1 66 1 1 1 44444444444 5 6 0 11 3 0 3 0 2 3 6 33 99999999 555 1 33 0 55 1 3 3 222 1 4 5 6666 1 1 111 1 77 111 000 9999999 8 8 9 0 6 2 1 7 0 6 0 7 88 1 1 333 0 0 1 3 888 1 1 1 1 22 4 1 0 555555555555555555555555555555 1 6 666 3 999999999999999999999 77 99 33333 3 4444444444444 1 3 6
lowQualScore : . . . ... . . . ...... . . .. .................................... . .. . . ........ . .. .... ....................... . . .. .. . . .. .. ...... ... ...... . . . ... . . . . ..... . . ... . .. . .. .. . . . . .... .. . . . . .... . . . . . . .. . . . ........... . . . .. . . . . . . . .. ........ ... . .. . .. . . . ... . . . .... . . ... . .. ... ... ....... . . . . . . . . . . . . .. . . ... . . . . ... . . . . .. . . . .............................. . . ... . ..................... .. .. ..... . ............. . . .
lowQualScore : 0 4 8 222 6 0 4 000000 7 4 00 111111111111111111111111111111111111 0 22 8 7 11111111 5 55 2222 55555555555555555555555 2 3 22 88 2 0 00 88 888888 777 222222 5 8 0 555 3 3 3 7 00000 7 7 333 3 33 0 00 33 0 3 3 0 2222 88 2 0 8 0 5555 0 0 0 0 5 0 55 0 0 0 00000000000 0 7 7 00 2 5 2 2 5 2 5 88 00000000 888 2 88 0 88 2 2 2 000 0 2 7 9999 0 0 777 0 33 777 888 5555555 0 0 2 2 7 5 0 3 7 7 7 3 33 4 4 000 6 8 4 6 888 4 4 0 0 99 3 0 4 222222222222222222222222222222 0 7 555 2 555555555555555555555 99 22 88888 7 5555555555555 0 3 7
consensus : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAATNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
Reference ( family-2693 ) : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAATNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
gi|1 : AAT-AACAACACAGACAGATAAAAAAAAATTTGGTACC---ATTAGTTTCACAAAAAGCCTGCTTCAT-TCTGCTGGCTGTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGAGGG----ATTTC-------C------TGAA-----GTATAACAGAA--TTGACCGAGAAGATACGAGTCATTTCTTACT-AAAACCT--GTTTGTGCCTGTAT---GTTTC------ATACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGTCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCAAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATAACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTTACATTGATTGTGAAACAAGTTCTT-ACAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAAAAAATATATATATATAAAAAATAAA-ATCCTCCCTCCCTCC-CCATTTTTAAAAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCTAAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---ATT---CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAA-AAATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTA
gi|10 : CTATTCATCTTATATTTAA-C-TTAGAGGAG---TACA-A---GAACTACAA---AA-TAACTCAAAGCAGAAAATACTTAATT------------CAGC------G----ATTTCTCTTATAC------CCAA-----GTATGACTGAA--TTAACTGAGTATGTACAAATTATTTCATACC-AAAAACCAGGTTCATAATGG-AT---GTTTT------TAAC
gi|11 : TGTTCGATC-TGTTTAAAAAACAACGTTGAAATCTGTTGAATAAATA------AAACAAA--------A-TAG----TTGTTTGCAAAGT-TGGGGTGGACAT-TTT--GAGATTTGGAGATTCCTTT-CTTGT-----------GTGTGTTTAT--ATATGT--GAAC-TAACAATATG------TT-----CGGGACAA-GCCTCctta
gi|12 : tttTACAATATT---C----GTAACATCGTGGTGA----GTTTC-------T------TAAAAGAAAGTATGATAGAA--TTGATCCAGTATATATGAGTTGTGTAGTATC-AAAAACTG-GTTCTTTTCTTGAT---GTTTCCTTATGTTACTGAAATGTTTTAATAT-CCT---ATTCTTg
gi|13 : CTTGGTGCCGGAATTAGGATTATCAAGAGTCTGCTTGATAGCAGCTGA-TATC---TTGATATTC-A-A-TTT----AA---CA-GTAACCGAA----AACTGGA-AGAC---AAACAATGAAT-CAGAATTG--A----GGAACACTT
gi|14 : aacGATCAATC-TGTATCGAAA-CAACGTTGAAATCGGTTGAATAGATAGA-------------AA-AG-----GG---TTGTTTAAAAAGTGTTGGGTAGAAAT-TTC--AAAATTTGGTGATTC---C-T---CTCTT-------GTGTTTA-AT--ATAct
gi|15 : AGAAAAAGA-TTGGTACCGGATGTGGTTTTATAGGGAGCCTGCTTGAT-C---CTAGCTGTC---CTGATATTTAA-C-TT-------------GG------------G---GA-AAAC-TTTAGCAGAATATATGATATT---T----GGAACACCTTGGa
gi|16 : cAATAGAGAAA-AA-AATAGT---T-GTATGAAAAGTGTGGGGTTGTAAT-TTTCAGATGGTT-----TT-----------------------TTTTTATAT--ATATA----AATGTGCTAAAAAGTTTTTTTT-----CGAGACAA-GCCCCTGTG-ATTATt
gi|17 : ACTATACAT-TAATGTACCTTG-GTCACAAAATAAAATCAATTTGTTTCACATTTTTCTTCACTTCCGTAAA---TTTTAACAGCATTGTCT---ATCACTTTTGGTGCTGTTT-G-TTT
gi|18 : aATCA-ATATA---TCTAAACCTTAGGGCA-AAAAATTATGTATCGACTGCCATGTTTCAT-ATGCAGTTACACCAGTTTTGCACCATGGTA---TTGTTGACATTCATCAGTTACATTT
gi|19 : GGTT-GTGTTTCAGCGTGGGAAGTCG-----TGC-TA-TG--AACGAC------------CTGACAAAATTTGAGAGTATCTGACATTTTAG--CCG-A--TCCAC-----ACCGATTAC------TGTTATATAT-AAGTGCAC
gi|2 : cGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATAGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTTATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGANN-NNNNNNNNNN----NN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAA
gi|2 : AAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--G-GTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---ATT---CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAA-AAATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGAAATAGTA-TAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTC---T-C---C-----------ATTTTTATAT--ATATAT--GAAT-TAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|20 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAAAATTGGAGAAAATTGTGAAACAAATTGAATGTATTTTGTGACAG-----------TGTAAA--ATTGTCTGTGACTGCTAATTATAATGTATGCATGATTGAT
gi|21 : gaat-GTCACAAAATATTTTCAATTTGTTTTACGTTTTTCTTTACTTTCATCACACATCTTGACA-CA--ATCTAACATCACATTTGGTG
gi|22 : tCTGTA---TACAC-GTTA-TGTTTTAAACTTCTCT--GTT-ATTTCACATTGATTGTGAAACAAGTTCTTACCAACTTagagg
gi|23 : ttacTTGGTAAATATAATGTATTTATGTTCGAT-ATGTATCGAAAAATACGTGGAAATCAGTTGAATt
gi|24 : tgtttacgtATGATGTTTTTAAA----CTTAATGCATTTGACATCTATTTTGAAACAAGTTCCT-CCAATATAAACAAAT
gi|25 : TTTATAT--ATATATAAGAAC---ACAAAATG------TTTTTTTCGAGACAG-GCCCCTGTGac
gi|26 : TTACTATGCAGTTAGACCATTTTTGCATCAAggtgtatgt
gi|3 : GAGATTACGAATATTACT--GAATAATTGATCGATTCGCATTGGT--AAAAAAGGCGC-AGTAACAATCTCCTGGtgtg
gi|3 : ccgcATGCAC-TGATGTACCT-TTGTCACCAAATAAATTCATATTATTTCACATTTTTCTTCACTTTCGTAAT---ATAAGACAGTATAACCT---ATCACGCTTGGTGCGGTTTGG-TTTTTTCCCTCG------CT-ATATCCAGGAGATTG---TTACTGCatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatattacgaaagtgaagaaaaatgtgaaataatatgaatttatttggtgacaaaggtacatcagtgcattgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|3 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcATTACGAAAGTGAAGAAAAATGTGAAATAATATGAATTTATTTGGTGACAAAGGTACATCAGTGCATTGAATCGTTCAAGTTTGGTAAATATAATGTATTTATGATCAAT-ATGTATCGAAAACTACGTTGAAATTGATTG----AATAGAGAA-AAA-AAACAAC-AG----------TTGTATGAAAAGTGTCGGGTGAAAATGTTCA-GATG--TGGAGATTC---CGC---CCTAAGGCTTGTGTTTTTATATAAATATAT--AAAT-T--------G------TTC----CGGGTCAA-GACCCTGtgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|4 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcgcagtaacaatctcctggatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatAATCAACAAAGGTGGCAGTTAAAAAAAG-CTTGGTACCGGAAGTGATTTCACGAAGGTTCTTCTTGAC-CCCAAT---TGTCCATCTTATATTCAATA-TTT---GAA---TAT-AA---GAA----AACC-GG-AAAC-CAAATTAAGAAATACGAAATTCGGAATTTGGAACACCTT-GGTG----ATTTC-------C------C--------TTAT-ACTGAAGTTTGAC---GTA------AGTTGTTTCGTACTCAAAACCG--GTTCG---CAATATAAGGTTTC------TTA--AAA----TTTACAATGTTATATATTTGTATATGTATCATAAC-ACAGCCATAATATGAGCTCATC-------TTTGACCTATATCATATTATgg
gi|5 : taacttgtgtgttgataaaAATCAATAACACTAACAG----AAAAAG-CTTAGTACCAGAAATGGTTTCATGTAGAGTCAGCTTAAT-TTC---AGCTGTCCTCCCGACATTCAA-C-TT-----AA---AAGAAA---GAA----AAT--GAGAAAC-CAAAGCAGGAAATATTTAATT--------TGTACCCCTCCGTAATTTCATTTC-------CCCAATACCAA-----GTATAATG-------GAC--AGTATGTACAGGTTATTTCTT-CA-AAAACCT--GATCATGAAAATAT---GTTCC------TTA
gi|6 : agttattttattaacccaatttcaatggcatatatatatatataaaagcagcaaactgagctcatatggtaacatgttcgatttgaaaaTTTATTTTTA----AATATATATATATATATATATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAA-ATGTATGTATTATATTGCTAACCTCACAATG-ACCAAGT-GATTTGTACAAGTTACCAATAATT-------CAACTT-----AAGTTAAAACTATTTAAATTCTGAGAATTACATTTAAACTGATAACTGA--------AATA--ATATATCTAATATAacctta
gi|7 : AAT-AACAACACAGACAGATAAAAAAA-ATTTGGTACC---ATTAGTTTCATAAAAAGCCTGCTTCAT-TCTGCTGGCTTTTCTTCTGGTATTCAA-AATTTC--GAA---TTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGGGGG----ATCTC-------C------TGAA-----GTATAACAGAA--ATGACCGAGAAGATACGAGTCATTTCTTACT-AAAACAT--GTTTGTGGCTGTAT---GTTTC------acatacactagt
gi|8 : CAACAACACTGGCATTTAGAAAAAG-CTGGGTACCGGAAGTGATTTCACGGAGAGCATGCTTGA----CACCGGTTGTCCTTCTGACATTCAA----CTCA-GAAGTATAAGAA---AAA----AG---GA-TAAC-CAAAGCATGAACTACGAAATT---A----GGAACACCTTGat
gi|9 : cagaggcgcgaccgaggtgagctcatatcgtaccaagcacgttaagtaaatagCATGGACATTACAATGCAT-TCATATACCT-GTGTCACCAAATAAATTAAATTTGTTTCACATTTTTGTTCACTTTCGTAAT---TTCGGACAGTACACCCC---ATCACGCTTGGTGTGGTTC-GTTTTTTTTCCTCACTATATCtc
gi|9 : gAAATTACGAAAGTGAACAAAAATGTGAAACAAATTTAATTTATTTGGTGACACAGGTATATGAATGCATTGTAATGTCCATGTTTGCTAAATATAATGTATTTATGAT-----ACGTTTCGAAAACTACGTGGAACTCGGTTGAAtttgctaaatataatgtatttatgatacgtttcgaaaactacgtggaactcggttgaaaa
blockSeqs : C T T GA G T TAGCAG G C CA CTTAGAGGAGTACAAGAACTACAA G TC T CGGAATTT G TG TTTC TCTTATACCCAA G T GT TG T A TC AG TTCTTG AAG CTTATG C A G TAT T C T C . C G TAA T TT T GA TC T A A A TTCT TA N N A . T T T T T A AA T T T . . G AA T C A C A C CC TTTGTTGC GAC T AA C TG C T T AGA A C C TTG A C ACA A TT AAC ACT TGGTGCT G T A G C T A C A AA T A TGT A T AAT A A T G CA G A AAGGATAAATAAAGAAATAGTATAGTAAC G G TCA T CGCCCTAAGGCTTGT AA AA GTGCT T TTTTTTTT G T C
blockSeqs : C T A GC G G CCCCA A C CA ATTTAACAGTAACCGAAAACTG . T A GA G GT . CCCAATACCAA G A . CC T G C G GAAAAT . . C C . . . . . . . . . . . . A . . . . . . C C . . G T T A G A T . T GCT A . . TT T T T GGA A T . TTT T A . C CT . ACA TGGTGCG . . C . C A . . . . A G TTT G C TGA T A T G C G A GAGAAAAAAAACAACAG A . CA T CTTTCTTGT . . TAAC A TTTTTTT A . .
blockSeqs : C A T GC G G TTCTG A C CT CTCAGAAGTATAAGAAAAAAG . C A C C TA . TTAAAAGAAA A T . CG T G C . GGCTGT . . . . . . . . . . . G . T . . . . . . . . . G . . . A . . . T T . TGT T T . G TA . ACG TGGTGTG . . . . A A G TTT G G TGT A T A T C G A AAACAAAATAG G . T G CTCTCTT . . TAAA A TTC T .
blockSeqs : . T . AT A A TTTC G C CT TATTTGAATATAAGAAAACC . C G T G GG . CTGAA A G . . G T A . AATGG . . . . C . G A C . G CA . ACG . . . A T AA . . A T T A T A G T GAAAAGGG C . C T TCC . . AC T TT A .
blockSeqs : GC G T TC G T CT AATTTCGAATTCGGAGAAAA . T G A G . . CC . A . . . T T . CAAT . . . . A C . G . . . A T A G T G . T . . . . T . TT G .
blockSeqs : . G CA . . . CTTAAAAGAAAGAAAAT . C T A . . A . T .
blockSeqs : . . CTTGGG . . A . .
blockSeqs : G .
blockSeqCons : GC* TCCA** *** TTT* ACG TGGTGCG TTT A* AAAGAAAANAG******************* CCCTCTT**************
originalCons : AATCAACAACACTGACAGNTAAAAAAAGACTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGAT-TCCGCTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACGGACAATATTATACAT-TAATGTACCT-G-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAATNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATCATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAGAGGATAAATAAAGAAA-AG-A-TAGT---TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTC---T-C---C-----------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
finalCons : AATCAACAACACTGACAGNTAAAAAAAGC-TTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGATCCA--CTGGCTGTCCTTCTGATATTCAA-A-TTTC--GAA---TACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCAC---CAATATTATACAT-TAATGTACCTTT-GTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAATTTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGATA-TGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAAAAGAAAANAG-------------------TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTCCCCTCTT--------------GTTTTTATAT--ATATAT--GAAT-TAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
Alignments
lowQualScore : 1 333333333 555555555555555555555555555555555555 22222222 1111 44444444444444444444444 11 11 111 111111 1 111 1 1 22222 222 11 1 11 1 2222 11 1 2222 1 11 44444444444 1 11 1 11 22222222 11 1 4444 111 111 111 111 11 111 1 7777777777777777777777777777 111 333333333333333 2222222222222 1
lowQualScore : 0 1 8 5 6 1 0 666666666 0 888888888888888888888888888888888888 5 77 0 2 99999999 2 33 4444 77777777777777777777777 4 6 99 11 7 1 77 55 444444 111 999999 2 8 0 777 7 3 3 6 77777 6 6 333 7 88 0 88 88 1 7 7 0 1111 33 5 1 0 0 4444 1 1 1 1 5 1 66 1 1 1 44444444444 5 6 0 11 3 0 3 0 2 3 6 33 99999999 555 1 33 0 55 1 3 33 3333 3 5 555 1 1 111 1 77 111 000 9999999 8 8 9 0 6 2 1 7 0 6 0 7 88 1 1 888 0 0 1 3 888 1 1 1 1 33 0 4 1 0 3333333333333333333333333333 1 6 666 3 777777777777777 77 77 99 888 3 4444444444444 1 3 6
lowQualScore : . . . . . . . ......... . .................................... . .. . . ........ . .. .... ....................... . . .. .. . . .. .. ...... ... ...... . . . ... . . . . ..... . . ... . .. . .. .. . . . . .... .. . . . . .... . . . . . . .. . . . ........... . . . .. . . . . . . . .. ........ ... . .. . .. . . .. .... . . ... . . ... . .. ... ... ....... . . . . . . . . . . . . .. . . ... . . . . ... . . . . .. . . . . ............................ . . ... . ............... .. .. .. ... . ............. . . .
lowQualScore : 0 4 8 7 6 0 4 999999999 5 111111111111111111111111111111111111 0 22 8 7 11111111 5 55 2222 55555555555555555555555 2 3 22 88 2 0 00 88 888888 777 222222 5 8 0 555 3 3 3 7 00000 7 7 333 3 33 0 00 33 0 3 3 0 2222 88 2 0 8 0 5555 0 0 0 0 5 0 55 0 0 0 00000000000 0 7 7 00 2 5 2 2 5 2 5 88 00000000 888 2 88 0 88 2 2 55 8888 8 7 888 0 0 777 0 33 777 888 5555555 0 0 2 2 7 5 0 3 7 7 7 3 33 4 4 222 6 8 4 6 888 4 4 0 0 00 0 3 0 4 5555555555555555555555555555 0 7 555 2 222222222222222 99 99 22 000 7 5555555555555 0 3 7
consensus : AATCAACAACACTGACAGNTAAAAAAAG-CTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGA-TTC-GCCGGCTGTCCTTCTGATATTCAA-A-TTTC--GA---ATACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCACAGACAATATTATACAT-TAATGTACCTCGGTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAATNTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGA-TATGTATCGAAAACNACGTTGAAATCGGTTGAATAGATAAAAGA---------A--AATAG---------TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTCCCCTCT--------TGTTTTTA--TAT--ATATAT--GAATTAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
Reference ( family-2693 ) : AATCAACAACACTGACAGNTAAAAAAAG-CTTGGTACCGGAANTGGTTTCACGAAGAGCCTGCTTGA-TCC-ACTGGCTGTCCTTCTGATATTCAA-A-TTTC--GA---ATACGGA---GAA----AA---GA-AAAC-CAAAGCAGGAAATACGAAATT---A----GGAACACCTTGGGGG----ATTTC-------C------CGAA-----GTATAACGGAA--TTGACCGAGTATATACGAGTTATTTCNTACT-AAAACCT--GTTCGTGNCNGTAT---GTTTC------TTACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATNACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTNACATCGATTGTGAAACAAGTTCTT-CCAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAANANATATATATATATANANAATAAATACCCCCCNCCCCTCCANCNTTTTTNANAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCCAAGATGGACGTTTTATATGGTT-NTGTTTCAGTGTAGGAAGTCGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCGATCAC---CAATATTATACAT-TAATGTACCTTTGTCACAAAATAANTTCAATTTGTTTCACATTTTTCTTCACTTTCGTAAT---TTTTGACAGCACTGTCT---ATCACGCTTGGTGCGGTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTNCTGCTATGAATATAAGATCGATTCTTATTAGTCGAAAAAAGGCGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTACGAAAGTGAAGAAAAATGTGAAACAAATTGAATTTATTTTGTGACAGAGGTACATTAATGTATAGTATTGTCCGAGATTGCTAANTATAATGTATNCATGATCGA-TATGTATCGAAAACNACGTTGAAATCGGTTGAATAAATAAAAGA---------A--AANAG---------TTGTTTGAAAAGTGTGGGGTGGAAAT-TTC--GATGTTTGGAGATTCCCCTCT--------TGTTTTTA--TAT--ATATAT--GAATTAANAAAAAG------TT-----CGNGACAA-GCCCCTGTGCACTATTTA
gi|1 : AAT-AACAACACAGACAGATAAAAAAAAATTTGGTACC---ATTAGTTTCACAAAAAGCCTGCTTCA-TTCTGCTGGCTGTTCTTCTGGTATTCAA-AATTTC--GA---ATTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGAGGG----ATTTC-------C------TGAA-----GTATAACAGAA--TTGACCGAGAAGATACGAGTCATTTCTTACT-AAAACCT--GTTTGTGCCTGTAT---GTTTC------ATACTGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATCGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTCAAAACTGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAACTATTGTGTCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTGATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCAAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATAACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCGTCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGCGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGATG-TGTTTTTAAC----CT--ATTCATTTTACATTGATTGTGAAACAAGTTCTT-ACAATTTAGACAAATCACACTTGGCATCTTCTTGGTATAACCAGTACTAAGCATAAATAAATAATAAATAAGGCCATAATAATTTAATTGCTAGATTATCATCCCCACCTGCCCCCTAACTTTCATGCCGCCCCTATCCTTTTTATTTTCATAAAAAAAAATATATATATATAAAAAATAAA-ATCCTCCCTCCCTCC-CCATTTTTAAAAAAAAATTTGGATGATAATCTAGCAATTAATTTATAATGGGCTAAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--GGTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---ATT---CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAA-AAATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGA--AATAGTATAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTCTCC------------ATTTTTA--TAT--ATATAT--GAATTAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTA
gi|10 : CTATTCATCTTATATTTAA-C-TTAGAGGA---GTACA-A---GAACTACAA---AA-TAACTCAAAGCAGAAAATACTTAATT------------CAGC------G----ATTTCTCTTATAC------CCAA-----GTATGACTGAA--TTAACTGAGTATGTACAAATTATTTCATACC-AAAAACCAGGTTCATAATGG-AT---GTTTT------TAAC
gi|11 : TGTTCGA-TCTGTTTAAAAAACAACGTTGAAATCTGTTGAATAAATAAAACA---------A--AATAG---------TTGTTTGCAAAGT-TGGGGTGGACAT-TTT--GAGATTTGGAGATTCCTTTCT--------TGTGTGTGTTTAT--ATATGT--GAACTAACAATATG------TT-----CGGGACAA-GCCTCctta
gi|12 : tttTACAATATT---C----GTAACATCGTGGTGA----GTTTC-------T------TAAAAGAAAGTATGATAGAA--TTGATCCAGTATATATGAGTTGTGTAGTATC-AAAAACTG-GTTCTTTTCTTGAT---GTTTCCTTATGTTACTGAAATGTTTTAATAT-CCT---ATTCTTg
gi|13 : AAC-CTTGGTGCCGGAATTAGGATTATCAAGAGTCTGCTTGA-T---AGCAGCTGATATCTTGATATTC-A-A-TTT----A---ACA-GTAACCGAA----AACTGGA-AGAC---AAACAATGAAT-CAGAATTG--A----GGAACACTT
gi|14 : GATCAA-TCTGTATCGAAA-CAACGTTGAAATCGGTTGAATAGATA---GA---------A--AAGGG---------TTGTTTAAAAAGTGTTGGGTAGAAAT-TTC--AAAATTTGGTGATTCCTCTCT--------TGTGTTTA---AT--ATAct
gi|15 : AGAAAAAG-ATTGGTACCGGATGTGGTTTTATAGGGAGCCTGCTTGA-TC---CTAGCTGTC---CTGATATTTAA-C-TT-------------GG------------G---GA-AAAC-TTTAGCAGAATATATGATATT---T----GGAACACCTTGGa
gi|16 : cAATAGAGAAAA-----------A--AATAG---------TTGTATGAAAAGTGTGGGGTTGTAAT-TTTCAGATGGTT-----------TTT--------T-TTTATA--TAT--ATAAAT--G---TGCTAAAAAGTTTTTTTT-----CGAGACAA-GCCCCTGTG-ATTATt
gi|17 : ACTATACAT-TAATGTACCTTGGTCACAAAATAAAATCAATTTGTTTCACATTTTTCTTCACTTCCGTAAA---TTTTAACAGCATTGTCT---ATCACTTTTGGTGCTGTTT-G-TTT
gi|18 : aATCA-ATATA---TCTAAACCTTAGGGCA-AAAAATTATGTATCGACTGCCATGTTTCAT-ATGCAGTTACACCAGTTTTGCACCATGGTA---TTGTTGACATTCATCAGTTACATTT
gi|19 : GGTT-GTGTTTCAGCGTGGGAAGTCG-----TGC-TA-TG--AACGAC------------CTGACAAAATTTGAGAGTATCTGACATTTTAG--CCG-A--TCCAC-----ACCGATTAC------TGTTATATAT-AAGTGCAC
gi|2 : cGAACTGTTTTAAAAT-TCA---ATTTTTTTTTCAATAGCAACTTTAG-CA-AACATGTGCTCCCCCTATAGGTCTGACCTATTTCATATTGTCAGAATTGTTGTACCGGTATAATGTTCTCTACAATTTC-----TGCTGGCGACCATCAGAATTTTAAAGTAAATAAGCCCTAAAATTATTGTGCCTACAATCACATATAGATTC---ACCTTGGAGCATAAACA--ACCTAACTCCTTATATGGTTTAC-ATGCAGTTAGACCATTTTTGCATCAAGGCGAGTCTGATGACAT--ATCAACTATATTTGTAGTGGTATCACAGACAATGCTGATGTCTGATCAGCAACAATTACAAAACCATTCCCATTGTCATTGAAATATTTCATCCAGTTGACTTTAGAGGAATGTTCCAACTCCACAGTTCGGCAGTTAGCAGTAACTTCAGTATTTCGGCTGTGTATCGGTGAAGTGTGTCCATTTGTTGCAGGTGTATGTTCCTCATCATGTGAATCGTTCATCTTGGACAGATCCCATAATGAAATACGACTGTCATTTCCCCCTGATAATAGTTTCTTGTCACTGACAAACTGCACCTGGGCAGCTCCTTGTGTGTGAGCATGTAATGAAAATAATTCCGCGACATTCTTCTTACTTGTGTCAAATACGGATATGAAACCATTCTCAAGTGCACAGGCCAGGTATTTACCATCAGGGGACATTGCCAAATGGTGTACGAATGGCGGATTAATCATGTATGCGCCCAGCTCAGATGGCGCATCTTGTAGCTCTTGCATGTTAAACTGATTCTGGCACTTGAGACGAGAAAAGTCCCAGTGAATTAAGTTACAATCCATTCCGCCACTAAAAATCTCCCATGGCCGTCTAATTCTAAAGCAAACTGTAGAGCAAATATTTGTGTGTTTACGACGTAAAGTCTTAAACAATTTCTTATCATCAAGGGAGATAATCTTAATTTCACCAGAGTCATCACATGCTGCCAAATAACTTTCTTTTTCATCCAAAACGATTTGATTAATCTCCTCCTCATTGAACTGGTATGATTCTACAGTGTCTTGTGGATTTCTTACATCCAGCACTTTTACAGTGTTGCCAAATGAGGCATAAAACATATGCTCTCTAGTTTTGGAGAGACAAACTGATGTACAATCATCTTGGTCTGTCTGCTGCTTGTGAACCAAACTTCCATTCCTCTTCCAGACACAGATCTCTCCGTCTTCACCACCAGATATTATGAGTGAACCATCTACTTTGGCATCTACACACAAACAGGAACTTGTATGGCCACCTTCCAACTTCATTTGTAACTCCTCCATGGCTCTGTAAGATAAACAGANN-NNNNNNNNNN----NN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATAATAAA
gi|2 : AAGATGGACATTTTATATGGTT-TTGTTTCAGTGTAGGAAGTTGATCTCTGCATGCTG--AACGACTTTGTTGCCAACCTGCTAAAATTTGAAACTATCTGAAATTTAAG--TTA-ATGTTCACTGATAACCAATCACAGACAATATTATACAT-TAATGTACC--GGTCACAAAATAATTTCAATTTGTTTCACATTTTTCTTAACTTTAGTAAT---TTTTCACAGCACTGTCT---ATT---CT-------GTTT-G-TTTTTTCCCCCAATGTATCTGATATCCAAGAGGTTGCGATTTCTGCTATGAATATAAGATTGATTCTTATTAGTCGAAAAAAGGTGCAAGT--CAATATTTTGGTAAATTCTGACCAATGAAAATCAAATAATAATTCATTCCCTTAATCACAATCTCTCGGAAAAATTAAGAAAGTGAAGAAAAATGTGTGACAAATTAAA-AAATTTTGTGACAGAGATACATTAATGTATAATATTGTCTGAGATTGCTTATTATAATGTATGCATCATCGACCAT-TACCGAAAACAACAATGAAATCAGTTGAACAAATAAAGGATAAATAAAGA--AATAGTATAGTAACTTGTTTCAAAAGTGTGGGGTGGAAAG-TTT--GATGTCTGGAGATTCTCC------------ATTTTTA--TAT--ATATAT--GAATTAAAAAAAAA------TT-----CATGACCATGCCCCTGTGCACTATTTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggacattttatatggttttgtttcagtgtaggaagttgatctctgcatgctgaacgactttgttgccaacctgctaaaatttgaaactatctgaaatttaagttaatgttcactgataaccaatcacagacaatattatacattaatgtaccggtcacaaaataatttcaatttgtttcacatttttcttaactttagtaatttttcacagcactgtctattctgtttgttttttcccccaatgtatctgatatccaagaggttgcgatttctgctatgaatataagattgattcttattagtcgaaaaaaggtgcaagtcaatattttggtaaattctgaccaatgaaaatcaaataataattcattcccttaatcacaatctctcggaaaaattaagaaagtgaagaaaaatgtgtgacaaattaaaaaattttgtgacagagatacattaatgtataatattgtctgagattgcttattataatgtatgcatcatcgaccattaccgaaaacaacaatgaaatcagttgaacaaataaaggataaataaagaaatagtatagtaacttgtttcaaaagtgtggggtggaaagtttgatgtctggagattctccatttttatatatatatgaattaaaaaaaaattcatgaccatgcccctgtgcactattta
gi|20 : gaactgttttaaaattcaatttttttttcaatagcaactttagcaaacatgtgctccccctataggtctgacctatttcatattgtcagaattgttgtaccggtataatgttctctacaatttctgctggcgaccatcagaattttaaagtaaataagccctaaaattattgtgcctacaatcacatatagattcaccttggagcataaacaacctaactccttatatggtttacatgcagttagaccatttttgcatcaaggcgagtctgatgacatatcaactatatttgtagtggtatcacagacaatgctgatgtctgatcagcaacaattacaaaaccattcccattgtcattgaaatatttcatccagttgactttagaggaatgttccaactccacagttcggcagttagcagtaacttcagtatttcggctgtgtatcggtgaagtgtgtccatttgttgcaggtgtatgttcctcatcatgtgaatcgttcatcttggacagatcccataatgaaatacgactgtcatttccccctgataatagtttcttgtcactgacaaactgcacctgggcagctccttgtgtgtgagcatgtaatgaaaataattccgcgacattcttcttacttgtgtcaaatacggatatgaaaccattctcaagtgcacaggccaggtatttaccatcaggggacattgccaaatggtgtacgaatggcggattaatcatgtatgcgcccagctcagatggcgcatcttgtagctcttgcatgttaaactgattctggcacttgagacgagaaaagtcccagtgaattaagttacaatccattccgccactaaaaatctcccatggccgtctaattctaaagcaaactgtagagcaaatatttgtgtgtttacgacgtaaagtcttaaacaatttcttatcatcaagggagataatcttaatttcaccagagtcatcacatgctgccaaataactttctttttcatccaaaacgatttgattaatctcctcctcattgaactggtatgattctacagtgtcttgtggatttcttacatccagcacttttacagtgttgccaaatgaggcataaaacatatgctctctagttttggagagacaaactgatgtacaatcatcttggtctgtctgctgcttgtgaaccaaacttccattcctcttccagacacagatctctccgtcttcaccaccagatattatgagtgaaccatctactttggcatctacacacaaacaggaacttgtatggccaccttccaacttcatttgtaactcctccatggctctgtaagataaacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaataaataataaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAAAATTGGAGAAAATTGTGAAACAAATTGAATGTATTTTGTGACAG-----------TGTAAA--ATTGTCTGTGACTGCTAATTATAATGTATGCATGATTGA-T
gi|21 : gaatCCTCTGTCACAAAATATTTTCAATTTGTTTTACGTTTTTCTTTACTTTCATCACACATCTTGACA-CA--ATCTAACATCACATTTGGTG
gi|22 : tCTGTA---TACAC-GTTA-TGTTTTAAACTTCTCT--GTT-ATTTCACATTGATTGTGAAACAAGTTCTTACCAACTT
gi|23 : ttacTTGGTAAATATAATGTATTTATGTTCGA-TATGTATCGAAAAATACGTGGAAATCAGTTGAATt
gi|24 : tgtttacgtATGATGTTTTTAAA----CTTAATGCATTTGACATCTATTTTGAAACAAGTTCCT-CCAATATAAACAAAT
gi|25 : TTTA--TAT--ATATATAAGAAC--ACAAAATG------TTTTTTTCGAGACAG-GCCCCTGTGac
gi|26 : TTACTATGCAGTTAGACCATTTTTGCATCAAggtgtatgt
gi|3 : GAGATTACGAATATTACT--GAATAATTGATCGATTCGCATTGGT--AAAAAAGGCGC-AGTAACAATCTCCTGGtgtg
gi|3 : ccgcATGCAC-TGATGTACCTTTGTCACCAAATAAATTCATATTATTTCACATTTTTCTTCACTTTCGTAAT---ATAAGACAGTATAACCT---ATCACGCTTGGTGCGGTTTGG-TTTTTTCCCTCG------CT-ATATCCAGGAGATTG---TTACTGCatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatattacgaaagtgaagaaaaatgtgaaataatatgaatttatttggtgacaaaggtacatcagtgcattgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|3 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcATTACGAAAGTGAAGAAAAATGTGAAATAATATGAATTTATTTGGTGACAAAGGTACATCAGTGCATTGAATCGTTCAAGTTTGGTAAATATAATGTATTTATGATCAA-TATGTATCGAAAACTACGTTGAAATTGATTGAATAGAGAAAAAA---------AACAACAG---------TTGTATGAAAAGTGTCGGGTGAAAATGTTCA-GATG--TGGAGATTCCGCCCTAAGGCTTGTGTTTTTA--TATAAATATAT--AAATT--------G------TTC----CGGGTCAA-GACCCTGtgaatcgttcaagtttggtaaatataatgtatttatgatcaatatgtatcgaaaactacgttgaaattgattgaatagagaaaaaaaacaacagttgtatgaaaagtgtcgggtgaaaatgttcagatgtggagattccgccctaaggcttgtgtttttatataaatatataaattgttccgggtcaagaccctggg
gi|4 : ccgcgagattacgaatattactgaataattgatcgattcgcattggtaaaaaaggcgcagtaacaatctcctggatatagcgagggaaaaaaccaaaccgcaccaagcgtgataggttatactgtcttatAATCAACAAAGGTGGCAGTTAAAAAAAG-CTTGGTACCGGAAGTGATTTCACGAAGGTTCTTCTTGA-CC---CCAATTGTCCATCTTATATTCAATA-TTT---GA---ATAT-AA---GAA----AACC-GG-AAAC-CAAATTAAGAAATACGAAATTCGGAATTTGGAACACCTT-GGTG----ATTTC-------C------C--------TTAT-ACTGAAGTTTGAC---GTA------AGTTGTTTCGTACTCAAAACCG--GTTCG---CAATATAAGGTTTC------TTA--AAA----TTTACAATGTTATATATTTGTATATGTATCATAAC-ACAGCCATAATATGAGCTCATC-------TTTGACCTATATCATATTATgg
gi|5 : taacttgtgtgttgataaaAATCAATAACACTAACAG----AAAAAG-CTTAGTACCAGAAATGGTTTCATGTAGAGTCAGCTTAATTTC-A---GCTGTCCTCCCGACATTCAA-C-TT-----A---AAAGAAA---GAA----AAT--GAGAAAC-CAAAGCAGGAAATATTTAATT--------TGTACCCCTCCGTAATTTCATTTC-------CCCAATACCAA-----GTATAATG-------GAC--AGTATGTACAGGTTATTTCTT-CA-AAAACCT--GATCATGAAAATAT---GTTCC------TTA
gi|6 : agttattttattaacccaatttcaatggcatatatatatatataaaagcagcaaactgagctcatatggtaacatgttcgatttgaaaaTTTATTTTTA----AATATATATATATATATATATAATAAATACCCCCCACCCCTCCAACTTTTTTTATAAAAAATTTGGATG-----------ATTAATTTATAAT-GGCCAA-ATGTATGTATTATATTGCTAACCTCACAATG-ACCAAGT-GATTTGTACAAGTTACCAATAATT-------CAACTT-----AAGTTAAAACTATTTAAATTCTGAGAATTACATTTAAACTGATAACTGA--------AATA--ATATATCTAATATAacctta
gi|7 : AAT-AACAACACAGACAGATAAAAAAAA-TTTGGTACC---ATTAGTTTCATAAAAAGCCTGCTTCA-TTCTGCTGGCTTTTCTTCTGGTATTCAA-AATTTC--GA---ATTCGGA---GAA----AA---GA-AAAC-TATAGCAGGAAATACAAAATT---A----GGAACACCTTGGGGG----ATCTC-------C------TGAA-----GTATAACAGAA--ATGACCGAGAAGATACGAGTCATTTCTTACT-AAAACAT--GTTTGTGGCTGTAT---GTTTC------acatacactagt
gi|8 : CAACAACACTGGCATTTAGAAAAAG-CTGGGTACCGGAAGTGATTTCACGGAGAGCATGCTTGA---C-ACCGGTTGTCCTTCTGACATTCAA----CTCA-GAAGTATAAGAA---AAA----AG---GA-TAAC-CAAAGCATGAACTACGAAATT---A----GGAACACCTTGat
gi|9 : cagaggcgcgaccgaggtgagctcatatcgtaccaagcacgttaagtaaatagATGCAT-TCATATACCTGTGTCACCAAATAAATTAAATTTGTTTCACATTTTTGTTCACTTTCGTAAT---TTCGGACAGTACACCCC---ATCACGCTTGGTGTGGTTC-GTTTTTTTTCCTCACTATATCtc
gi|9 : gAAATTACGAAAGTGAACAAAAATGTGAAACAAATTTAATTTATTTGGTGACACAGGTATATGAATGCATTGTAATGTCCATGTTTGCTAAATATAATGTATTTAT----GA-TACGTTTCGAAAACTACGTGGAACTCGGTTGAAtgtaatgtccatgtttgctaaatataatgtatttatgatacgtttcgaaaactacgtggaactcggttgaaaa