lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 333 1 1 1 2222 11111111 11 1 1 111 11 33333333 1111111 22 11 666666666 11 11111111 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 333333333333 111111111111111111111 1
lowQualScore : 000 3 2 4 2 4444 2 5 333 3 1 22 33 5555 1 333 22 66666666 2 0 99 3 6 333 66666 2 8 4 888 66 7 00 44 00000000 7777 44 2 6 6 55 2 55 1 1111111 3 00 8 9999 3 00 55 99999 777777777 4 2 0 4 55 6 222 2 555 66666666 22 444444 1 22 1 33 2 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 000000000000 3 1 777777777777777777777 2 5
lowQualScore : ... . . . . .... . . ... . . .. .. .... . ... .. ........ . . .. . . ... ..... . . . ... .. . .. .. ........ .... .. . . . .. . .. . ....... . .. . .... . .. .. ..... ......... . . . . .. . ... . ... ........ .. ...... . .. . .. . ....................................................................................................................................... ............ . . ..................... . .
lowQualScore : 111 7 4 2 2 7777 2 4 555 7 1 99 11 0000 0 777 99 11111111 2 4 55 4 5 777 22222 7 9 4 888 88 6 33 66 88888888 1111 66 2 2 2 00 2 00 9 2222222 6 88 5 0000 6 11 00 11111 444444444 1 8 7 3 99 1 888 2 888 88888888 22 666666 6 11 5 77 6 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 777777777777 8 8 777777777777777777777 0 8
consensus : AATCAGGCGCGTATCCAG-GCATACGCACGTACGCC-AAT----G-CGTACAATTCG---TCAGCAAAANG--TGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGTGCTAATTTCTTCCGAATAT-----A-TCAGTGGTAATTTACCTATAAGACA---TCGAGACTCCTGTCGGTCAGCGTGAGCGGCGTGACAA--GCTATG-AT---TTTTAAAACG----ATT--TAAAATCGTTAT--TTNCG--TTTCC-----TAA-CATTGCTAAT--G-TGC-A-GT--AT-----AAAAGTGACAAAC--AAAATGCNANATTGAGGCTG-AAATATAG---CATGAGAA--CGCATC--------ATTTG--T------C-TTCTAATTTCC--A-AAA--TGT--------------------TC---N---TG-G--GGG----------------A--------AAAN--C-C---CC----------CC-----C---C-----AC---A-CCT-------A-C--C--C--C--ACTTGCAGCA--------T-CGCTGCTC-ATATC--------------------TGGCGTA-CAGTTCAAACCCGTTCAGGTACGCCCCT
Reference ( gi|3 ) : AATCAGGCGCGTTCTCGG-GCATATGCACGTACGCC-AAT----G-CGTACAAGTCG---TCTGCAAAATG--TGAAAACAT--AAACG--CTCCAA---A--TA-----TG-C-ATAAAAACTCGAGGCTGAGACGGTTAGGTGTTTATTTCTTCCGAATAT-----A-TCAGTTGTAATTTACCTGTAAGACA---TCGAGACTCCTGTCAGTCAGTTTGAGCGGCGTGACAA--GCTACG-CT---TTTTAAAACG----ATT--TAAAATTGCTGT--TTTTG--TTTTC-----TTA-CATAACTGAT--G-TGC-A-TT--AT-----AAAAGTGG-AAACCGAAAATGCAAGATTGAGGCTG-CAGTATAA---CACGAGAA--CACATC--------ATTTG--T------C-TTCTAATTTCC--A-AAA--TGT--------------------CC---A---TG-G--GGG----------------A--------AAAG--C-C---CC----------TT-----C---C-----AC---A-CCT-------A-T--C--C--C--ACTTGCAGCA--------A-CCCTGTTC-ATATT--------------------TGGCGTA-CAGTTCAAACCAGTTCAGGTACGCCCCT
gi|32 : AGTCCGGTGCGTATCCAG-AAACACGAACGTATGCC-AAT----G-CGTACAATTCG---TCGGCAAAATG--TGAAAACAT--ACAAA--CTCTAATTCA--CA-----TGTC-ATA
gi|1 : ctgaaatgaaaaaaaaatataattatacctgtatgtaatttagctatATCAGGCGCGT-ATCGG-GCATACGCACGGACGCC-AAT----G-CGTACAATTCG---TCCGCAAAATG--TGAAAACAT--AAAAC--CTCTAA---A--CA-----TG-C-ATAAAAACTGAAGGCTGAGAGATTTATGTGCCCATTTCTTCCAAATAT-----A-TAAGTTGTAATTTACCTGTAAGACA---TCGAGATTCCTGTCAGTCAGTTTGAGCGGCGTGACAA--GCTGGG-TCAAAGTTTAGAACT----ATT--TAAAGTCGTTAT--TTTCG--TTTCC-----TAA-CATTGCTAAT--G-TGC-C-GT--GT-----AAAA---------------TGCAAGATTGAGGCTG-AAATATAA---CATGAGAT--TACAGC--------ATTTG--T------C-TTCTAATTTCC--A-AAA--TGT--------------------TC---T---TG-G--TGG----------------A--------GAGA--C-C---CCCACTCACTGGTT-----C---T-----AC---A-CCT-------A-C--CCAC--T--ACTTGCAGCC--------T-CGCTGCTC-ATATT--------------------TTACGTA-CAGTTCAAGCC
gi|24 : aaaaagtatgtttacacacatatagatgattaacgatcataaacagagaagcatatcggtaacttcaaaccgtaagtccttgataataaagaaagtaatcatataactatacagatatttACCAGGTGCGTACCCAG-GCTTACGCACATACGCC-AAT----A-CGTACAATTCG---TCAGCAAAA-G--TGAAAGAAT--Acctgattatacactct
gi|2 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacTCAGGCGCGTATCCAG-GCATACGCACGTACGCC-AAT----G-CGTACAATTCG---TCAGCAAAA-G--TGAAAACAT--AACAA--CTCCAA---A--TA-----tagcatgagaatacatcattttcattctaatttgtgggagaccccccgacaaccttactcacaccccacttgcagcgtcgctgctgataactggtgtacagttcaaacccgtccaagtacaccct
gi|30 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgtTCAGGCACATATCCAA-GCATACGTACGTATGCC-AAT----G-----------------TGCAAAA-G--TGAAAACAT--AAAAG--TTCCAA---A--TA-----TA-CAATAAAAACTGAAGACTGAGaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgacgtgggccgcgtgataagctatgctttttaaaacgatttttctaacctttcttatatgtaatataaaagcgacaaataaatgccaaattaacgttgaaatatagcacgagaacgtaacatttgccttctgattttcaaaatgttcttgatggattccaaacccccaccgacgggagttgccctcaactcgtagtaccgctgctacgctacttagatctggcatacagttcaaattcgttcaggtacgac
gi|4 : tagtacaattaaaaacaaaattattatatatatccagtacacCAGGTGCGT-ATCAG-GCAAACGCACGCGCGCC-AAT----G-TGTACAGTTCG---TCAGGAAAATG--TGAAAACAT--AAAAA--CTCAAA---AAATA-----TG-C-ATAAAA-CTGAAGACAGAGATGGTTATGTGCTCATTTCTTCCATATAT-----A-TATGTGGTAATTTACCTTTACGACA---TCGAGACGCATGTCGGTCATTGGGAGTGGCCTGATAG--GTTATGATT---TTTTAAAACG----ATT--CAAAATCGTTAT--TTTTG--TTTCC-----TAA-CATTGCGTAT--G-TCC-A-GT--TT-----AAAAGTGATAAAC--AAAATGCAAGATTGAGATTG-AAATATAA---CACGAGAA--CACACC--------AGTTG--T------C-TTCTTAATTCC--A-AAAT-TGT--------------------CCTG-G---TG-G--GGtgaatgtcaggccttggtttactc
gi|17 : CAGGCGAGTGTCCAG-GCATACGCAAGTGCGCC-AA-----G-CGTACAA-TAG---TCAGCAAAtggggggatcatatttggcttacagagcaaacccgtccaggtacgcccctga
gi|15 : cCAGGCGCGT-ATCGAAGCATACGCACGTACGCC-AGT----G-CGTACAATTCG---TCAGCAAAAAG--TGAAAACAT--AGAAA--TTCCAA---A--TA--------C-ATAAAAACTTAAGGCTGAGAGGGTTACGTGCT-----------AATAT-----A-TCAGTGGTAA-TTACCTATgactgagagggttatctgctaatttctttcgaatatcgagactcctgtcgttcagcgtgagcggcgagacaatctatgattttaaaatgatttaaaatcgttatttttgtttctaaacattaataagtaataaattcagtataaaagagacaaacgaaattcaagattgaggctgaaatatagctccatgtgaacacgtcactgatgatttatcttctagtttcctaacttttcttggtgtacagcctctctctccca
gi|13 : gaatgaCAGGCGCGTATCCAG-GCGTATGCACGTACGCT-AAT----G-CTTACAATTCC---TTAGCAAAAAA--TTAAAACAG--AAAC----TCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCTATTTCTTACGAATAT-----G-TCAATGGTAATTCACTTATttctcacgcagtaattgttttatttatttttaaagataacatgagaaaacatcacttgtcttaaaatttctaaacttttcttggcggacaaccacaaaatcccccttccacaccaaaccccacttgcagcatcgctgctgatatccggcgtacagttaaaacctgttcagatacgcccctgaatg
gi|12 : tttaatgtagaatcgCAGGCGCGTATCCAG-GCGTATGCACGTACGCT-AAT----G-CTTACAATTCC---TTAGCAAAAAA--TTAAAACAG--AAAC----TCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCTATTTCTTACGAATAT-----G-TCAATGGTAATTCACTTATttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctg
gi|20 : gtttaatgtagaatcgCAGGCGCGTATCCTG-GCATACATACGTACGCC-AAT----G-CGTACAATTCG---TCAGCAAAAAG--TGAAAACAT--AGACA--CTCAAA---A--TA--------C-AT-AAAACTGAAGATTCAGAGAGTTACGTGCTAATGTCTTCCGAATATACATAA-TAAGTGGAGGTTTACCTATttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctga
gi|27 : aacagctatatttcacagatcgatatgtaagcgattacatacgagggcttgtcaataaattatattaggcatagtaatataaaaccaaaatatctatttcaagactatacattaaCAGGCGCGTATCCAG-GCATACGCACGTACGCC-AAT----G-TGTACAAATTGAAGTCAGCAAAAAG--TTAAAACAG--AAA------------------------------AAACGCTGAAGGCTGAGAGGATAACATGCTAATTTCTTCCGAATAT-----A-TCAGTGGTAATTTACTTttctcccgcagtaattatttca
gi|11 : ttccttggaagacaatcgCAGGCGCATATCCAG-GCATACGCGCGTGCGCA-AAT----G-CGTACAATTCG---TCATCTAAATG--GGGAAACAT---AACG----CAAA---G--TA-----TG-C-AT-AGAACTGAAGGCTGAAATGGTAATGTGCTAATTTCTacttctcccgcagtaattatttttggta
gi|34 : gtagatcatctctgatagctgcatataaacattgaCAGGCGCGTATCCGG-GCATGCGCACGTACGCCAAATCCCGG-CGCACAATTCG---TCAGCAAAAAG--TGAAAACcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|7 : ctttacagcGCGCGTATCCAA-ACATACGCACGTACGCC-AAT----A-CGTACAATTCG---TCAGCAAAAAG--TTAAAACAT--AGAAA--CTTCAA---A--TAGCATCTA-C-ATAAAAACTAAAGGCTGAGAAGGTTA----CTAATTTCTTCCAAATAt
gi|16 : ctttaaacataatCGCGTACCCAG-GCATACGCACGTACGCC-AAT----GTCG---AAA-----------AAAAT---CGAATACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGTTGAGAGGGTAACATGCTGATTTCTTTCGAATAT-----A-TCAGCAGTATTTTACCTATattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|29 : aCAG-GCATACGCACGAACGAC-AAT----A-TGTACAATTCG---TCAGTAAAAAG--TGAAAACAA--AAA----CTCCAA---A--TAGATC-TA-C-ATGTAAACTGGCGGTTGACAGAGTTATGTGCTTGATTCTTCCCA---------G-GCAGTGGTAATTtctcatgcagtgactatttcaatgttttctaaatataacatgagaaaacatcatttatttttttcttctaattttccaagttttctctcccatcaccgccccaaacccacctcccacacctagccctagttgtagcatcgctgcttataccagggatatatttcaaacctgttctgatacatctct
gi|31 : aaatagtccttagacagcatcATGCC-AGT----G-GGTACAATTCG---TCAGCAAAAAG--TGAAAACGT--AAAAAAACTCAAA---A--CA-----TG-C-ATAAAAACGGAAGGCTTGGAGGGTTACGTGTTAATTTCTTCCGAATAT-----A-TCACCAGTAATTTACCTATatttcattaatttt
gi|18 : TCG---CCTGTAAATTTCCTCAAAACGTCAAGAAA--CTCTAG---A--TA--------C-ATTAAAACTGAAGGCTGAGAGGGTTACGTGCTAATTTCTTCCAATTAC-----A-ACAGTGATAATTTACATGTAttcttccgcagcaattatttt
gi|6 : acaattagt---TCAGCAAAATG--CGAAAACCT--AAAAA--CTCGAA---A--TA-----TG-C-ATAAAAACTGAAAGTTTAGAGGGTTATGTGCTAATTTCTTCTGAATAT-----A-TCAATTGTAATTTTCCTATAAGACA---TCGAGACTCTTGTCTGTCAGCGTTAGTGGCATAACAAGTGCTATG-AT---TTTTAAAACA----ATT--TAAAATTGTTAT--TTTTG--TTTCC-----TAG-CATTGCTAAT--G-TGC-T-GT--A------AAAAGTGACAAAC--AAAATGCAAGATTGAGGCTG-AAATATTG---CATGAGAA--CACTTC--------A-TTG--T------C-TTCTAATATCA--ATATA--TTT--------------------TC---T---TG-G--CAG----------------A--------GAGA--TAC---TC----------TC-----C---CTGATGAC---ATCCT-------T-T--G--C--C--ACTTGCAGCA--------T-TGCTGTAT-ATATT--------------------TGGCATA-CAGTTTAAACCCGTTCAGGTATGCCCtatctcccgcagtaattatttaaaccattttaagtataacatgaagcatcatttgtcttctaatttctaaaatgttcttgtggggagacccccaaaatctccctcatacacctacctccaattgcaacatcgctgcttatatctagtgtacagctcaaaactgttcaggttcgcccctgat
gi|8 : ttaTCCAA---A--T-------G-C-ATAAAAACTGAAGGCTGTAATGGTTACGTGATAATTTCTTCCGAAGAT-----A-TCAATTGTAATTTAACT
gi|26 : AA---A--TA--------C-ATAAAAACTGAAGACTGAGAGGGTCGCGTGCCATTTTTTTCCGATTAG-----A-TCCGTGGAAAGTTACttttcttccgcagtaattatttcaattatttttagtataagatgagaaaacataatttgtcttctaattgttgaaatgttctttttcccccccccccccccccccccaaaaagccctcccacaccaaccctaacagtttaaacctgttcagatccgctcctcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
gi|17 : AGACTGAGAGGGTTATCTGCTAATTTCTTTCGAATAT-----atatttcatccgtagtaattattttaattgtttttaaacataacatgagaaaaaatcatttgttttttctaatttcttaaaaaaattcttagggacagaacccaaaaatccccctcccacacataaccccacttgcaacatcactgcttatatct
gi|9 : ccaggcgagtgtccaggcatacgcaagtgcgccaagcgtacaatagtcagcaaATAT-----AGTTAGTT-TATTTT--CTTTCAAACG---GCGAGA-TAATGTCA-TGA-CTTAAGCGGCGCCATAA--GCAATG-AT---TATTCAAACG----ATA--TAAAATT--TAT--AACTG--CTTTC-----CTAACCTTACTAAT--A-TGT-A-TT--AT-----AACAGTGACAAAC--AAAATGCCACATTAACGCTGACA-TATAG---CATAAGAA--CGCAAT--------AGTTG--C------C-TTCTAGTTTTC--A-AAA------------------------------A---T-----------------------------------------T---TC----------TC-----C---T-----AC---A-CTT-------A-C--CCTC--C--ACTCGTACCG--------T-CGCTGCTC-ATGTTGAAGCTATGCTATGCAGATATGCCATC-CAGTTCAAATTCATTCAGGAACGcgagactcctgtcgttcagcgtgagcggcgagacaatctatgattttaaaatgatttaaaatcgttatttttgtttctaaacattaataagtaataaattcagtataaaagagacaaacgaaattcaagattgaggctgaaatatagctccatgtgaacacgtcactgatgatttatcttctagtttcctaacttttcttggtgtacagcctctctctccca
gi|17 : aaatgtaataagagggtattgctgcctggctgtgctgtttaggtttcaaaggacaatcgactttcacagctaccatgagcTAATTT--CTTTCGAATA---TCGAGACTCCTGTCGTTCAGCGTGAGCGGCGAGACAA--TCTATG-A----TTTTAAAATG----ATT--TAAAATCGTTAT--TTTTG--TTTCTAAACATTA--ATAAGTAATAAA-TTC-A-GT--AT-----AAAAGAGA-CAAACG-AAATTCAAGATTGAGGCTG-AAATATAGCTCCATGTGAA--CACGTCACTGATG-ATTTA--T------C-TTCTAGTTTCC--T-AAC--TTT--------------------TC-------TT-G--GTG----------------T--------ACAG--C-C---TC----------T
gi|14 : ccaggcgagtgtccaggcatacgcaagtgcgccaagcgtacaatagtcagcaaagactgagagggttatctgcGTGAGACAGTGTCATGACTTCTGCCGATCTGTGCGGGTGGCACAATGA--GCTATG-AT---TTTAAAAACA----ATT--AAAAATGGTTAT--TTACA--TTTCC-----TAA-CATTGCTTAT--A-TGT-AGTT--AT-----AAAAGTG----ACC-AAAAGGCCACGTTAATGCTG-AAATATAG---CATGAGAA--TGCATC--------ATTTC--A------T-TTCTAATTTTC--A-AAA--TGT--------------------TC---A---CG-G--GGG----------------A--------ctctccca
gi|22 : tggctttgttgtttagggttaaatgacaatcaactctcgcagcatcatgagcatggctaggcctatattttggagtcatattggatattgtattttatttgtttcaaaactttcaaacgTGAGACA---TCGAGACTTTTGTCAGTCAGCT--------ATGAC------TA----------TTAAAACG----GTT--TAAAATCGTTAT--TTATG--TTTCC-----TTA-CATTGCTAAT--G-TGC-A-TT--AT-----AAAAGTGACAAAC--AAAACGCAAGATTGAGGCGG-AAATAAAG---TATGAGAA--CACATC--------ATTTG--T------C-TTCTTATTTCC--T-AAA--TGT--------------------TC---T---TG-A--GGGGGTGGA----------G--------AAAG-------------------------------------A---------------------------C--ACTTGCAGCA--------T-TGCTGCTC-ATATC--------------------TGGCGTA-CAATTCAAATCCGTCCAGGTACGCCCCTtgacctcaaacct
gi|19 : AAAATA---TCATGACG--TGTCA--CGGT--AAGCGGCGTATTAA--GCAGTG-A----TTTTAACACG----ATTAAAAAAATTATTCT--TCACG--TTTCC-----TAA-CCTTGCTAAT--A-TGTAA-TTTAATAGATAAAAAGTGACAAA--AGAAATGCTATATTTA-GCTG-AAATATAG---TATGAGAT--CGCAAC--------ATTTA--C------T-TTCTAAATTTC--A-CAA--CTT--------------------TCTTGA---TA-G--AGG----------------A--------CAAA--C-C---CC----------
gi|2 : aatcgactttcacagccattatgagcacgcatgcattatagattcatattgacaactaaagttaatttattttattttgaatggcgTGGGCCGCGTGATAA--GCTATG-CT---TTTTAAAACG----ATT--T-------------TTCTAACCTTTC-----TTA-TAT------------GT-A-AT--AT-----AAAAGCGACAAAT---AAATGCCAAATTAACGTTG-AAATATAG---CACGAGAA--CGTAAC--------ATTTG--C------C-TTCTGATTTTC--A-AAA--TGT--------------------TC---T---TG-A--TGG----------------ATTCC----AAAC--C-C---CC----------AC-----C---G-----ACGGGA-GTT-------G-C--C--C--TCAACTCGTAGTACCGCTGCTA-CGCTACTT-AGATC--------------------TGGCATA-CAGTTCAAATTCGTTCAGGTACGca
gi|5 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgttcaggcgcgtatccaggcatacgcacgtacgccaatgcgtacaattcgtcagcaaaagtgaaaacataacaactccaaataaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgacgTGAGCGGCGTGATAA--GCTGTG-------------ACG----ATT--TAAAATTGTTGTAATTCGG--TTTCC-----GAA-CCTTGCTAAT--GTTAT-A-GT--AT-----AAAAATGGCAAAT--AAAATGTCACATTTACGCTC-AAATATAG---CACGAAAA--TGTAAG--------ACTTG--C------C-TTTTAATTTTC--A-AAAATTGT--------------------CC---C---C---------------------------------------C-T---CC----------TT-----CACTT-----AC---A-CTT-------A-CTGC--T--CG-AGTTGAAGCT--------A-CGCTACTC-TGAGA--------------------TGACTTA-CAGTTCAAGTTCGTTCAAGTATGCac
gi|23 : atcaaatgtgatgcgaggggtattgccgcatgaatctgttgtttaggtttcaaatgacaatcgacattcgcagccttcatgagcatgaatgtattatataggtacacatgactggtgtaggtagtttatttttttcaaacggcgatacattgtctcgacgTGAATGGCGTGACAA--GCTATG-AT---TTTTAAAATGATATATT--TAACCTTGCT
gi|11 : ccaaatatgtaataagatgggtattgcttcctggctccgctgttttaaaaaatcaaatgacaatcgactttcacagccatcatgagcattaatgcattatggattaatattgattactgaaagtttattttctttcaaacggcaaggcagtgccatgacgAGCGGCGTGACAA--TCTAAG-AC---CTTTAAAACG----ATT--TCAGATAGTTAT--TTTTG--TTCTC-----TAA-CATTGCTAAT--T-TGA-A-GT--AT-----AAAAGTGACAAAC--AAAATGCAAGATGGAGGCTG-aatatatagtataaaaatgacgggtaaatgccatatt
gi|25 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcctcgttAAATGCCACATTAACGCTG-AAATATAG---CACGAGAA--CGCAAC--------ATTTG--C------C-TTCTAATTTTC--A-AAA--TATTCTTGATGCCGTCCAAACTCCC---A---CG-GACGGG----------------AGTTGG---AGAA--T-C---CC----------TC-----C---T-----AT---A-CTT-------G-C--C--C--TCAACTCGAAGTGTCGTT---A-CTCGATTCGAAGCC--------------------TGACGTA-CAGTTCAAATTCGTTCAGGTACACCCtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|33 : tgtgttgtttatatgcctttgctaatgtgtagcatAAATGCCATATTTACGCTG-AAATATAG---CACGATAA--CGCAAC--------ATTTG--C------T-TTCTAATTTTC--A-AAA--TTT--------------------TCTTGA---TG-G--AGG----------------C--------CAAA--C-C---CC----------
gi|28 : AGGCTG-AAATATTG---TACGAGAAAACGCGTG--------ATTTA--T------C-GTCTTATTTCA--C-AAA--TGT--------------------TCTAGA---TA-G--TGG----------------A--------A--G--C-C---CC----------CCGAAGAC---C-----TC---AACCT-------A-A--C--T--CG-ACTCGCAGCG--------C-CCATGTTC-ATAAC--------------------TGGCGCA-CAGTTCAAACCCATCCAGATACGc
gi|16 : caattcgtcagcaaattaaaagcataaaAATATAA---CATGAGAA--AACATC--------ATTTA--TTTTTTTC-TTCTAATTTTC--C-AAG--TTTTCTCTC--------------CC---A---TC-A--CCG----------------CCCC-----AAAC--C-CA--CC----------TC-----C---C-----AC---A-CCT-------A-G--C--C--CT-AGTTGTAGCA--------T-CGCTGCTT-ATACC--------------------AGGGATA-TATTTCAAACCTGTTCTGATACATCTCTaca
gi|18 : acgcgtacccaggcatacgcacgtacgccaatgtcgaaaaaaatcgaatacataaaaactccaaatatgcataaaaactgaaggttgagagggtaacatgctgatttctttcgaatatatcagcagtattttacctattctcatgcagtgactatttcaatgttttctaAGTATAA---CATGAAG-----CATC--------ATTTG--T------C-TTCTAATTTCT--A-AAA--TGT--------------------TC---T---TGTG--GGG----------------AGACCCCCAAAAT--C-T---CC----------CT-----CA--T-----AC---A-CCT-------A-C--CT-C--C--AATTGCAACA--------T-CGCTGCTT-ATATC--------------------TAGTGTA-CAGCTCAAAACTGTTCAGGTTCGCCCCT
gi|7 : acaattagttcgcctgtaaatttcctcaaaacgtcaagaaactctagatacattaaaactgaaggctgagagggttacgtgctaatttcttccaattacaacagtgataatttacatgtatatctcccgcagtaattatttaaaccattttaAATATAA---CATGAGAC--AAAATT--------GTTTG--T------C-TTCTAATTTCT--A-AAA--TTT--------------------TC---T---TT-A--GAG----------------A--------GACC--C-C---CC----------CC-----C---C-----CC---C-CC-------------C--C--C--CCTTgat
gi|24 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttataAATATAG---CATGAGAA--TACATC--------ATTT---T------CATTCTAATTT---------------------------------------G---TG-G--GAG----------------A----------------C---CC----------CC-----C---G-----AC---AACCTTACTCACA-C--C--C--C--ACTTGCAGCG--------T-CGCTGCTG-ATAAC--------------------TGGTGTA-CAGTTCAAACCCGTCCAAGTACACCCtaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacaccaggtgcgtacccaggcttacgcacatacgccaatacgtacaattcgtcagcaaaagtgaaagAGTATAA---GATGAGAA--AACATA--------ATTTG--T------C-TTCTAATTGTT--G-AAA--TGT--------------------TC---T---TT-----------------------------------T--T-C---CC----------CC-----C---C-----CC---C-CC-------------C--C--C--CCCCCCAAAA--------AGCCCT-CCC-ACACC--------------------AACCCTAACAGTTTAAACCTGTTCAGATCCGCTCCTt
gi|38 : tccaaatgcataaaaactgaaggctgtaatggttacgtgataatttcttccgaagatatcaattgtaatttaactttttcttccgcagtaattatttcaattatttttAATATGA---CATGAGAA--AACACC--------ATTTG--T------C-TCCTTATTTCT--A-AAG--Tcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
gi|21 : aTATAA---CATGAGAA--AACATC--------ATTTA--T------C-TTCTAAGTTCC--A-AAA--TTT--------------------TC---T---TG-G--GGAGGTCTCCGAGACTCTTA--------AACC--C-C---CC----------TC-----C---C-----AC---T-CCT-------A-T--CT-C--C--ACTTGCATCA-----------CCTGCTT-ATATT--------------------TGGCAAA-CAGTTCAAATTTGTTCAGGTACACTCCTtatctta
gi|15 : gtaattatttcaattattttaagaATAA---CATGAGAA--AACATC--------ACTTG--T------C-TTAAAATTTCT--A-AAC--TTT--------------------TC---T---TG-G--CGG----------------ACAACCAC-AAAATCC-C---CC----------TT-----C---C-----AC---A-CCA-------AAC--C--C--C--ACTTGCAGCA--------T-CGCTGCTG-ATATC--------------------CGGCGTA-CAGTTAAAACCTGTTCAGATACGCCCCTggcagctggcaaatttgactttgtcccgcgatattctacaaccaaccatcttatatatttatacattattttgtcaagatattt
gi|13 : gaatgacaggcgcgtatcgaagcatacgcacgtacgccagtgcgtacaattcgtcagcaaaaagtgaaaacatagaaattccaaatacataaaaacttaaggctgagagggttacgtgctaatatatcagtggtaattacctatttctcacgcagtaattgttttatttatttttaaagATAA---CATGAGAA--AACATCTTGAAAGTGTTTT--T------C-TTCTAATTTCC--C-TAA--TATTCTACCC-------------CC---A---CC-C-------------------------------AAA--C-CTCTCC----------CT-----C---C-----TC---C-CCT-------C-C--C--CTAC--ACCTGCAACA--------T-CGCTTCTT-ATATC--------------------TGGCGTA-CAGTTCAAATCTGTTCAGTTACGCCCCTgaatg
gi|12 : tttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaatgaatcttaaacATAA---CATGAGAA--AACATCTTGAAAGTGTTTT--T------C-TTCTAATTTCC--C-TAA--TATTCTACCC-------------CC---A---CC-C-------------------------------AAA--C-CTCTCC----------CT-----C---C-----TC---C-CCT-------C-C--C--CTAC--ACCTGCAACA--------T-CGCTTCTT-ATATC--------------------TGGCGTA-CAGTTCAAATCTGTTCAGTTACGCCCCTg
gi|26 : gtttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaatgaatcttaaacATAA---CATGAGAA--AAAATC--------ATTTGTTT------T-TTCTAATTTCTTAA-AAA--AAT--------------------TC---T---TA-G--GGACAGAACCC--------A--------AAAATCC-C---CC----------TC-----C---C-----AC---A-CATA------A-C--C--C--C--ACTTGCAACA--------T-CACTGCTT-ATATC--------------------Tga
gi|10 : aaatacataaaaactgaagactgagagggtcgcgtgccatttttttccgattagatccgtggaaagttacatatttcatccgtagtaattattttaattgtttttaaacTAA---CATGAGAA--AACACC--------ATTTG--T------C-TTCTAATTTCT--A-AAA--TGT--------------------TC---T---TG-G--AGG----------------AGACCCCC-AAAACCC-C---CC----------TC-----C---C-----AT---A-CCC-------A-C--CT-C--C--GCTGGCAGCA--------T-CGCTACTT-ATATC--------------------TGGCGTA-CAGTTCAAACATGTTCAAATACGGCCCT
gi|11 : ctatttctcccgctggaatgatttgtggtaatttacctatttctcccgcagttattatttcaaatattttttaaatC--A-AAA--TG----------------------C---AAGATG-G--AGGCTGTG-----------A--------AGAG--C-C---CCACC-------CT-----C---C-----AC---A-CCT-------A-C--CA-C--C--ACTTGCAGCA--------T-CGCTACTC-ATATT--------------------TGTCGTA-CAGTTCAAACCCGTTCCGTTACGCCCCTgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|7 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaa--------AAAT--T-C---CC----------CT-----C---CTCAGTAC---A-CCT-------A-C--C--C--CC-ACTTGCAACA--------T-CGCTGCTT-ATATgat
gi|4 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagTC-ATATT--------------------TGGCTTA-CAGAGCAAACCCGTCCAGGTACGCCCCTcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|37 : caggtgcgtatcaggcaaacgcacgcgcgccaatgtgtacagttcgtcaggaaaatgtgaaaacataaaaactcaaaaaatatgcataaaactgaagacagagatggttatgtgctcatttcttccatatatatatgtggtaatttacctttacgacatcgagacgcatgtcggtcattgggagtggcctgataggttatgattttttaaaacgattcaaaatcgttatttttgtttcctaacattgcgtatgtccagtttaaaagtgataaacaaaatgcaagattgagattgaaatataacacgagaacacaccagttgtcttcttaattccaaaattgtcctggtggggtggggggaC-AGATC--------------------TGGCGTA-CAGTTAAAATTCGTCCAGTTGCGCCCga
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|35 ): CAGCTTGATTCGCTACACAGATCTGGCGTAGCGTACAGTTAAAATTTGCCCATTTGCGCCCCTGAATACTA
Unaligned ( gi|36 ): TCTTAGACCCTGGTCATAATGATTAATAGCGTTCTTATACTTTAACGGTACTTTATTAGAAATATTTA
Unaligned ( gi|39 ): TACATAATGAGTCAAAAAAATTTCTTTGCTTATATAA
Alignments
lowQualScore : 111111 11111111 888888888888888888888888888888888888888888888888888888888888888888888888888888 1111111111111111 111111111 11111111 11111111111111111111
lowQualScore : 2 4444 333 7 22 22 1 333 22 111111 2 2 1 4 5 4444 55555 1 444 888 1 1 999 1 44 0 6666 3 44 8 88 88 0 2 9999999 2 9999999 2 33 1 1 0 222 5555 66666666 444444 1 22 22 1 22 3 888888888888888888888888888888888888888888888888888888888888888888888888888888 1 9999999999999999 1 1 88888 333 3 000000000 22 33333333 66666666 1 77777777777777777777 1 44444
lowQualScore : . .... ... . .. .. . ... .. ...... . . . . . .... ..... . ... ... . . ... . .. . .... . .. . .. .. . . ....... . ....... . .. . . . ... .... ........ ...... . .. .. . .. . .............................................................................. . ................ . . ..... ... . ......... .. ........ ........ . .................... . .....
lowQualScore : 1 5555 333 2 88 99 1 333 66 666666 1 1 2 4 6 5555 66666 5 111 888 4 9 555 6 22 8 5555 1 22 4 55 22 2 9 3333333 9 3333333 9 99 0 0 7 777 6666 22222222 444444 5 11 11 5 11 6 999999999999999999999999999999999999999999999999999999999999999999999999999999 7 0000000000000000 8 8 44444 222 6 444444444 55 22222222 33333333 7 77777777777777777777 8 55555
consensus : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAA--TCGTTAT--TTTCGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAA--TNTTCT------TG-----------------------G--G-----G----------G---------A---------AAA--CCC-CC-----C----------C-C-C-----AC---A-CCT-------A-C--C--C--C--ACTTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
Reference ( family-2564 ) : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAANGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAA--TCGTTAT--TTNCGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAA--TGTTCN------TG-----------------------G--G-----G----------G---------A---------AAA--NCC-CC-----C----------C-C-C-----AC---A-CCT-------A-C--C--C--C--ACTTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
gi|1 : ATCAGGCGCGTATC-GGGCATACGCACGGACGCC-AAT----GCGTACAATTCG---TCCGCAAAATGTGAAAACAT--AAAAC--CTCTAA---A--CA-----TG-C-ATAAAAACTGAAGGCTGAGAGATTTATGT-GCCCATTTCTTCCA----AATAT-----ATAAGTTGTAATTTAC---CTGTAAGACA---TCGAGATTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTG-GGTCAAAGTT-TAGAACTATTTAAAG--TCGTTAT--TTTCGTTTCCTAACATTGCTAATGT-G-------CCG-T-------GT----------------AAAATGCAAGATTGAGGCTGAAATATAA---CATGAGAT--TACAGC--------ATTTGT------C-TT--CTAATTTCC--A-AAA--TGTTCT------TG-----------------------G--T-----G----------G---------A---------GAG--ACC-CC-----CACTCACTGGTT-C-T-----AC---A-CCT-------A-C--CCAC--T--ACTTGCAGCCTCGCTG--------CTC-AT--------------------ATTTTACGT-A-----CAGTTCAAGCCC
gi|10 : aaaaagtatgtttacacacatatagatgattaacgatcataaacagagaagcatatcggtaacttcaaaccgtaagtccttgataataaagaaagtaatcatataactatacagatatttATTTCTCCCGCTGGAATG------ATTTGTGGTAATTTAC---CTATctgattatacactct
gi|10 : ctAAAT-TAA---CATGAGAA--AACACC--------ATTTGT------C-TT--CTAATTTCT--A-AAA--TGTTCT------TG-----------------------G--A-----G----------G---------AGACCCCCA-AAA--CCC-CC-----CT---------C-C-C-----AT---A-CCC-------A-C--CT-C--C--GCTGGCAGCATCGCTA--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAACATGTTCAAATACGGCCCTttctcccgcagttattatttcaaatattttttaaattaacatgagaaaacaccatttgtcttctaatttctaaaatgttcttggaggagacccccaaaacccccctcccatacccacctccgctggcagcatcgctacttatatctggcgtacagttcaaacatgttcaaatacggccctgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : ctatttctcccgctggaatgatttgtggtaatttacctatttctcccgcagttattatttcaaatattttttCAGGCGCATATCCAGGCATACGCGCGTGCGCA-AAT----GCGTACAATTCG---TCATCTAAATGGGGAAACAT-----AA--CGCAAA---G--TA-----TG-C-AT-AGAACTGAAGGCTGAAATGGTAATGT-GCTAATTTCTgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : gtagatcatctctgatagctgcatataaacattgaCGTTAGCGGCGTGACAA--TCTAAGACC----TT-TAAAACGATTTCAGA--TAGTTAT--TTTTGTTCTCTAACATTGCTAATTT-G-------AAG-T-------ATAAAA-GTGACAAAC--AAAATGCAAGATGGAGGCTGcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|11 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcct----------G---------A---------AGA--GCC-CCACC--C----------T-C-C-----AC---A-CCT-------A-C--CA-C--C--ACTTGCAGCATCGCTA--------CTC-AT--------------------ATTTGTCGT-A-----CAGTTCAAACCCGTTCCGTTACGCCCCTtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|12 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATgat
gi|12 : gtttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAA--TATTCT-------------------------------------------------------------ACCCCCACCCAAACCTCT-CC-----C----------T-C-C-----TC---C-CCT-------C-C--C--CTAC--ACCTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctga
gi|13 : gtttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATga
gi|13 : tttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAA--TATTCT-------------------------------------------------------------ACCCCCACCCAAACCTCT-CC-----C----------T-C-C-----TC---C-CCT-------C-C--C--CTAC--ACCTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctg
gi|14 : tttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaTGAGACAGTGTCATGACTTCTGCCG-ATCTGTGCGGGTGGCACAATGA--GCTATGATT----TT-AAAAACAATTAAAAA--TGGTTAT--TTACATTTCCTAACATTGCTTATAT-G-------TAGTT-------ATAAAA-GTGAC---C--AAAAGGCCACGTTAATGCTGAAATATAG---CATGAGAA--TGCATC--------ATTTCA------T-TT--CTAATTTTC--A-AAA--TGTTCA------CG-----------------------G--G-----G----------G---------A---------g
gi|15 : tggctttgttgtttagggttaaatgacaatcaactctcgcagcatcatgagcatggctaggcctatattttggagtcatattggatattgtattttatttgtttcaaaactttcaaacggCAGGCGCGTATCGAAGCATACGCACGTACGCC-AGT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGAAA--TTCCAA---A--TA--------C-ATAAAAACTTAAGGCTGAGAGGGTTACGT-GCT---------------AATAT-----ATCAGTGGTAA-TTAC---CTATtgacctcaaacct
gi|15 : gaatgaAAAGATAA---CATGAGAA--AACATC--------ACTTGT------C-TT--AAAATTTCT--A-AAC--TTTTCT------TG-----------------------G--C-----G----------G---------ACAACCACA-AAA--TCC-CC-----C----------TTC-C-----AC---A-CCA-------AAC--C--C--C--ACTTGCAGCATCGCTG--------CTG-AT--------------------ATCCGGCGT-A-----CAGTTAAAACCTGTTCAGATACGCCCCTttctcacgcagtaattgttttatttatttttaaagataacatgagaaaacatcacttgtcttaaaatttctaaacttttcttggcggacaaccacaaaatcccccttccacaccaaaccccacttgcagcatcgctgctgatatccggcgtacagttaaaacctgttcagatacgcccctgaatg
gi|16 : gaatgacaggcgcgtatcgaagcatacgcacgtacgccagtgcgtacaattcgtcagcaaaaagtgaaaacatagaaattccaaatacataaaaacttaaggctgagagggttacgtgctaatatatcagtggtaattacctatttctcacgcagtaattgttttatttatttttCGCGTACCCAGGCATACGCACGTACGCC-AAT----G--------------TCGAAAAAAATCGAATACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGTTGAGAGGGTAACAT-GCTGATTTCTTTCG----AATAT-----ATCAGCAGTATTTTAC---CTATgaatg
gi|16 : aAAATATAA---CATGAGAA--AACATC--------ATTTATTTTTTTC-TT--CTAATTTTC--C-AAG--TTTTCTCTCCCATC-----------------------A--C-----C----------G---------CCCC------AAA--CCCACC-----T----------C-C-C-----AC---A-CCT-------AGC--C--C--T--AGTTGTAGCATCGCTG--------CTT-AT--------------------ACCAGGGAT-A-----TATTTCAAACCTGTTCTGATACATCTCTtctcatgcagtgactatttcaatgttttctaaatataacatgagaaaacatcatttatttttttcttctaattttccaagttttctctcccatcaccgccccaaacccacctcccacacctagccctagttgtagcatcgctgcttataccagggatatatttcaaacctgttctgatacatctct
gi|17 : acgcgtacccaggcatacgcacgtacgccaatgtcgaaaaaaatcgaatacataaaaactccaaatatgcataaaaactgaaggttgagagggtaacatgctgatttctttcgaatatatcagcagtattttacctattctcatgcagtgactatttcaatgttttctCAGGCGAGTGTCCAGGCATACGCAAGTGCGCC-AA-----GCGTACAA-TAG---TCAGCAAAGACTGAGA
gi|17 : cAAGACTGAGAGGGTTATCT-GCTAATTTCTTTCG----AATAT---------------------------CGAGAC-----------TCCTGTCG-TTCAGCGTGAGCGGCGAGACAA--TCTATGA-T----TT-TAAAATGATTTAAAA--TCGTTAT--TTTTGTTTCTAAACATTAATAA-GT-AATAAATTCAG-T-------ATAAAA-GAGACAAAC--GAAATTCAAGATTGAGGCTGAAATATAGCTCCATGTGAA--CACGTCACTGATG-ATTTAT------C-TT--CTAGTTTCC--T-AAC--TTTTCT------TG-----------------------G--gggttatctgctaatttctttcgaatatcgagactcctgtcgttcagcgtgagcggcgagacaatctatgattttaaaatgatttaaaatcgttatttttgtttctaaacattaataagtaataaattcagtataaaagagacaaacgaaattcaagattgaggctgaaatatagctccatgtgaacacgtcactgatgatttatcttctagtttcctaacttttcttggtgtacagcctctctctccca
gi|18 : ccaggcgagtgtccaggcatacgcaagtgcgccaagcgtacaatagtcagcaAAAACGTCAAGAAA--CTCTAG---A--TA--------C-ATTAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCA----ATTAC-----AACAGTGATAATTTAC---ATGTAtgtacagcctctctctccca
gi|18 : acaattagttcgcctgtaaatttcctcAAGTATAA---CATGAA-----GCATC--------ATTTGT------C-TT--CTAATTTCT--A-AAA--TGTTCT------TGT----------------------G--G-----G----------G---------AGACCCCCA-AAA--TCT-CC-----C----------T-CAT-----AC---A-CCT-------A-C--CT-C--C--AATTGCAACATCGCTG--------CTT-AT--------------------ATCTAGTGT-A-----CAGCTCAAAACTGTTCAGGTTCGCCCCTtatctcccgcagtaattatttaaaccattttaagtataacatgaagcatcatttgtcttctaatttctaaaatgttcttgtggggagacccccaaaatctccctcatacacctacctccaattgcaacatcgctgcttatatctagtgtacagctcaaaactgttcaggttcgcccctgat
gi|19 : acaattagttcgcctgtaaatttcctcaaaacgtcaagaaactctagatacattaaaactgaaggctgagagggttacgtgctaatttcttccaattacaacagtgataatttacatgtatatctcccgcagtaattatttaaaccattttTCATGACGTGTCACGGTAAGCGGCGTATTAA--GCAGTGATT----TT--AACACGATTAAAAAAATTATTCT--TCACGTTTCCTAACCTTGCTAATAT-G-------TAA-TTTAATAGATAAAAAGTGACAAAA--GAAATGCTATATTTAG-CTGAAATATAG---TATGAGAT--CGCAAC--------ATTTAC------T-TT--CTAAATTTC--A-CAA--CTTTCT------TGATA--------------------G--A-----G----------G---------A---------CAA--ACC-CC-----C----------gat
gi|2 : aatcgactttcacagccattatgagcacgcatgcattatagattcatattgacaactaaagttaatttattttattttgaatggcgaaaataTCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAA-GTGAAAACAT--AACAA--CTCCAA---A--TA-----a
gi|2 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgtCGTGGGCCGCGTGATAA--GCTATGCTT----TT-TAAAACGATTT----------------------TTCTAACCTTTCTTATAT-G-------TAA-T-------ATAAAA-GCGACAAAT--AAA-TGCCAAATTAACGTTGAAATATAG---CACGAGAA--CGTAAC--------ATTTGC------C-TT--CTGATTTTC--A-AAA--TGTTCT------TG-----------------------A--T-----G----------G---------ATTCC-----AAA--CCC-CC-----A----------C-C-G-----ACGGGA-GTT-------G-C--C--C--TCAACTCGTAGTACCGCTGCTACGCTACTT-AG--------------------ATCTGGCAT-A-----CAGTTCAAATTCGTTCAGGTACGaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgacgtgggccgcgtgataagctatgctttttaaaacgatttttctaacctttcttatatgtaatataaaagcgacaaataaatgccaaattaacgttgaaatatagcacgagaacgtaacatttgccttctgattttcaaaatgttcttgatggattccaaacccccaccgacgggagttgccctcaactcgtagtaccgctgctacgctacttagatctggcatacagttcaaattcgttcaggtacgac
gi|20 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgttcaggcgcgtatccaggcatacgcacgtacgccaatgcgtacaattcgtcagcaaaagtgaaaacataacaactccaaataaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgaCAGGCGCGTATCCTGGCATACATACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGACA--CTCAAA---A--TA--------C-AT-AAAACTGAAGATTCAGAGAGTTACGT-GCTAATGTCTTCCG----AATATACATAATAAGTGGAGGTTTAC---CTATac
gi|21 : aacagctatatttcacagatcgatatgtaagcgattacatacgagggcttgtcaataaattatattaggcatagtaatataaaaccaaaatatctatttcaagactatacattaaTAAGATATAA---CATGAGAA--AACATC--------ATTTAT------C-TT--CTAAGTTCC--A-AAA--TTTTCT------TG-----------------------G--G-----GAGGTCTCCGAG---------ACTCTT----AAA--CCC-CC-----CT---------C-C-C-----AC---T-CCT-------A-T--CT-C--C--ACTTGCATCACC--TG--------CTT-AT--------------------ATTTGGCAA-A-----CAGTTCAAATTTGTTCAGGTACACTCCTttctcccgcagtaattatttca
gi|22 : gtaattatttcaattatttTGAGACA---TCGAGACTTTTGTCA-GTCAGC--------------------TATGACT----AT-TAAAACGGTTTAAAA--TCGTTAT--TTATGTTTCCTTACATTGCTAATGT-G-------CAT-T-------ATAAAA-GTGACAAAC--AAAACGCAAGATTGAGGCGGAAATAAAG---TATGAGAA--CACATC--------ATTTGT------C-TT--CTTATTTCC--T-AAA--TGTTCT------TG-----------------------A--GGGGGTG----------G---------A---------GAA----------------------------------AG---A----------------------C--ACTTGCAGCATTGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAATTCAAATCCGTCCAGGTACGCCCCTggcagctggcaaatttgactttgtcccgcgatattctacaaccaaccatcttatatatttatacattattttgtcaagatattt
gi|23 : CGTGAATGGCGTGACAA--GCTATGATT----TT-TAAAATGAT-----A--T----AT--TT---------AACCTTGCTAATAT-A-------TAG-T-------ATAAAA-ATGACGGGT---AAATGCCATATT
gi|24 : ccaaatatgtaataagatgggtattgcttcctggctccgctgttttaaaaaatcaaatgacaatcgactttcacagccatcatgagcattaatgcattatggattaatattgattactgaaagtttattttctttcaaacggcaaggcagtgccatgaACCAGGTGCGTACCCAGGCTTACGCACATACGCC-AAT----ACGTACAATTCG---TCAGCAAAA-GTGAAAGAAT--A
gi|24 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacAATATAG---CATGAGAA--TACATC--------ATTT-T------CATT--CTAATTT----------------G------TG-----------------------G--G-----A----------G---------A----------------C-CC-----C----------C-C-G-----AC---AACCTTACTCACA-C--C--C--C--ACTTGCAGCGTCGCTG--------CTG-AT--------------------AACTGGTGT-A-----CAGTTCAAACCCGTCCAAGTACACCCtagcatgagaatacatcattttcattctaatttgtgggagaccccccgacaaccttactcacaccccacttgcagcgtcgctgctgataactggtgtacagttcaaacccgtccaagtacaccct
gi|25 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacaccaggtgcgtacccaggcttacgcacatacgccaatacgtacaattcgtcagcaaaagtgaaagTTGCTAATGT-G-------TAG-C-------ATAAA-----------------TGCCACATTAACGCTGAAATATAG---CACGAGAA--CGCAAC--------ATTTGC------C-TT--CTAATTTTC--A-AAA--TATTCT------TGATGCCGTCCAAACTCCCACGGACG--G-----GAGTT------G---------G---------AGA--ATC-CC-----T----------C-C-T-----AT---A-CTT-------G-C--C--C--TCAACTCGAAGTGTCGTTA--------CTCGATTCGAA---------------GCCTGACGT-A-----CAGTTCAAATTCGTTCAGGTACACCCt
gi|26 : tgtgttgtttatatgcctAA---A--TA--------C-ATAAAAACTGAAGACTGAGAGGGTCGCGT-GCCATTTTTTTCCG----ATTAG-----ATCCGTGGAAAGTTAC---ATAT
gi|26 : AAACATAA---CATGAGAA--AAAATC--------ATTTGT------T-TTTTCTAATTTCTTAA-AAA--AATTCT------TA-----------------------G--G-----G----------ACAGAACCCAA---------AAA--TCC-CC-----CT---------C-C-C-----AC---A-CAT-------AAC--C--C--C--ACTTGCAACATCACTG--------CTT-AT--------------------ATCTttcatccgtagtaattattttaattgtttttaaacataacatgagaaaaaatcatttgttttttctaatttcttaaaaaaattcttagggacagaacccaaaaatccccctcccacacataaccccacttgcaacatcactgcttatatct
gi|27 : aaatacataaaaactgaagactgagagggtcgcgtgccatttttttccgattagatccgtggaaagttacatatttcatccgtagtaattattttaattgtttttCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GTGTACAAATTGAAGTCAGCAAAAAGTTAAAACAG--AAAAA---------------A-----CG-C---------TGAAGGCTGAGAGGATAACAT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---TTA
gi|28 : ttccttggaagacaatcgCAATTCG---TCAGCAAA--TTAAAAGCAT--AAAAG--GCTGAA---A--TA-----Tcttctcccgcagtaattatttttggta
gi|28 : AGGCTGAAATATTG---TACGAGAAAACGCGTG--------ATTTAT------C-GT--CTTATTTCA--C-AAA--TGTTCTAGA---TA-----------------------G--T-----G----------G---------A---------AGC--CCC-CCGAAGAC----------C-T-C-----A----A-CCT-------A-A--C--T--CG-ACTCGCAGCGCCCATG--------TTC-AT--------------------AACTGGCGC-A-----CAGTTCAAACCCATCCAGATACGtgtacgagaaaacgcgtgatttatcgtcttatttcacaaatgttctagatagtggaagccccccgaagacctcaacctaactcgactcgcagcgcccatgttcataactggcgcacagttcaaacccatccagatacgaca
gi|29 : caattcgtcagcaaattaaaagcataaaGCATCCAGGCATACGCACGAACGAC-AAT----ATGTACAATTCG---TCAGTAAAAAGTGAAAAC----AAAAA--CTCCAA---A--TAGATC-TA-C-ATGTAAACTGGCGGTTGACAGAGTTATGT-GCTTGATTCTTCCC----A---------GGCAGTGGTAATTaca
gi|3 : aaatagtccttagacaAATCAGGCGCGTTCTCGGGCATATGCACGTACGCC-AAT----GCGTACAAGTCG---TCTGCAAAATGTGAAAACAT--AAACG--CTCCAA---A--TA-----TG-C-ATAAAAACTCGAGGCTGAGACGGTTAGGT-GTTTATTTCTTCCG----AATAT-----ATCAGTTGTAATTTAC---CTGTAAGACA---TCGAGACTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTACGCTT----TT-TAAAACGATTTAAAA--TTGCTGT--TTTTGTTTTCTTACATAACTGATGT-G-------CAT-T-------ATAAAA-GTGG-AAACCGAAAATGCAAGATTGAGGCTGCAGTATAA---CACGAGAA--CACATC--------ATTTGT------C-TT--CTAATTTCC--A-AAA--TGTCCA------TG-----------------------G--G-----G----------G---------A---------AAA--GCC-CC-----T----------T-C-C-----AC---A-CCT-------A-T--C--C--C--ACTTGCAGCAACCCTG--------TTC-AT--------------------ATTTGGCGT-A-----CAGTTCAAACCAGTTCAGGTACGCCCCTatttcattaatttt
gi|30 : TCAGGCACATATCCAAGCATACGTACGTATGCC-AAT----GT----------------GCAAAA-GTGAAAACAT--AAAAG--TTCCAA---A--TA-----TA-CAATAAAAACTGAAGACTGAG
gi|31 : tagtacaattaaaaacaaaattattatatatatccagtacacATGCC-AGT----GGGTACAATTCG---TCAGCAAAAAGTGAAAACGT--AAAAAAACTCAAA---A--CA-----TG-C-ATAAAAACGGAAGGCTTGGAGGGTTACGT-GTTAATTTCTTCCG----AATAT-----ATCACCAGTAATTTAC---CTATtgaatgtcaggccttggtttactc
gi|32 : AGTCCGGTGCGTATCCAGAAACACGAACGTATGCC-AAT----GCGTACAATTCG---TCGGCAAAATGTGAAAACAT--ACAAA--CTCTAATTCA--CA-----TGTC-ATAttcttccgcagcaattatttt
gi|33 : ctgaaatgaaaaaaaaatataattatacctgtatgtaatttagctatAAATGCCATATTTACGCTGAAATATAG---CACGATAA--CGCAAC--------ATTTGC------T-TT--CTAATTTTC--A-AAA--TTTTCT------TG-----------------------A--T-----G----------G---------AGGCC-----AAA--CCC-CC-----
gi|34 : CAGGCGCGTATCCGGGCATGCGCACGTACGCCAAATCCCGGCGCACAATTCG---TCAGCAAAAAGTGAAAAC
gi|35 : ctttacagcTCGCTA--------CAC-AG--------------------ATCTGGCGT-AGCGTACAGTTAAAATTTGCCCATTTGCGCCCCTt
gi|37 : cagcttgatTCGCTA--------CAC-AG--------------------ATCTGGCGT-A-----CAGTTAAAATTCGTCCAGTTGCGCCCgaatacta
gi|38 : ctcgctgcttgatAAATATGA---CATGAGAA--AACACC--------ATTTGT------C-TC--CTTATTTCT--A-AAG--T
gi|4 : CAGGTGCGTATC-AGGCAAACGCACGCGCGCC-AAT----GTGTACAGTTCG---TCAGGAAAATGTGAAAACAT--AAAAA--CTCAAA---AAATA-----TG-C-ATAAAA-CTGAAGACAGAGATGGTTATGT-GCTCATTTCTTCCA----TATAT-----ATATGTGGTAATTTAC---CTTTACGACA---TCGAGACGCATGTCG-GTCATTGGGAGTGGCCTGATAG--GTTATGATT----TTTTAAAACGATTCAAAA--TCGTTAT--TTTTGTTTCCTAACATTGCGTATGT-C-------CAG-T-------TTAAAA-GTGATAAAC--AAAATGCAAGATTGAGATTGAAATATAA---CACGAGAA--CACACC--------AGTTGT------C-TT--CTTAATTCC--A-AAA--TTGTCC------TG-----------------------G--T-----G----------G---------tatctta
gi|4 : TC-AT--------------------ATTTGGCTT-A-----CAGAGCAAACCCGTCCAGGTACGCCCCTggtggggggatcatatttggcttacagagcaaacccgtccaggtacgcccctga
gi|5 : caggtgcgtatcaggcaaacgcacgcgcgccaatgtgtacagttcgtcaggaaaatgtgaaaacataaaaactcaaaaaatatgcataaaactgaagacagagatggttatgtgctcatttcttccatatatatatgtggtaatttacctttacgacatcgagacgcatgtcggtcattgggagtggcctgataggttatgattttttaaaacgattcaaaatcgttatttttgtttcctaacattgcgtatgtccagtttaaaagtgataaacaaaatgcaagattgagattgaaatataacacgagaacacaccagttgtcttcttaattccaaaattgtcctggtggggtggggggaTGTC---TCGACGTGAGCGGCGTGATAA--GCTGTGA--------------CGATTTAAAA--TTGTTGTAATTCGGTTTCCGAACCTTGCTAATGTTA-------TAG-T-------ATAAAA-ATGGCAAAT--AAAATGTCACATTTACGCTCAAATATAG---CACGAAAA--TGTAAG--------ACTTGC------C-TT--TTAATTTTC--A-AAAATTGTCC-----------------------------------------------------------------------------CCC-TC-----CTTCA------C-T-T-----AC---A-CTT-------A-CTGC--T--CG-AGTTGAAGCTACGCTA--------CTC-TG--------------------AGATGACTT-A-----CAGTTCAAGTTCGTTCAAGTATGCga
gi|6 : atcaaatgtgatgcgaggggtattgccgcatgaatctgttgtttaggtttcaaatgacaatcgacattcgcagccttcatgagcatgaatgtattatataggtacacatgactggtgtaggtagtttatttttttcaaacggcgatacat---TCAGCAAAATGCGAAAACCT--AAAAA--CTCGAA---A--TA-----TG-C-ATAAAAACTGAAAGTTTAGAGGGTTATGT-GCTAATTTCTTCTG----AATAT-----ATCAATTGTAATTTTC---CTATAAGACA---TCGAGACTCTTGTCT-GTCAGCGTTAGTGGCATAACAAGTGCTATGATT----TT-TAAAACAATTTAAAA--TTGTTAT--TTTTGTTTCCTAGCATTGCTAATGT-G-------CTG-T-------A-AAAA-GTGACAAAC--AAAATGCAAGATTGAGGCTGAAATATTG---CATGAGAA--CACTTC--------A-TTGT------C-TT--CTAATATCA--ATATA--TTTTCT------TG-----------------------GCAG-----A----------G---------A---------GAT--ACT-CT-----C----------C-C-TGATG-AC---ATCCT-------T-T--G--C--C--ACTTGCAGCATTGCTG--------TAT-AT--------------------ATTTGGCAT-A-----CAGTTTAAACCCGTTCAGGTATGCCC
gi|7 : ttaGCGCGTATCCAAACATACGCACGTACGCC-AAT----ACGTACAATTCG---TCAGCAAAAAGTTAAAACAT--AGAAA--CTTCAA---A--TAGCATCTA-C-ATAAAAACTAAAGGCTGAGAAGGTTA-----CTAATTTCTTCCA----AATA
gi|7 : ctttaaacataatAAATATAA---CATGAGAC--AAAATT--------GTTTGT------C-TT--CTAATTTCT--A-AAA--TTTTCT------TT-----------------------A--G-----A----------G---------A---------GAC--CCC-CC-----C----------C-C-C------------CCC-------C-C--C--C--C--CCTTattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|7 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttat---------AAA--TTC-CC-----C----------T-C-CTCAGTAC---A-CCT-------A-C--C--C--CC-ACTTGCAACATCGCTG--------CTT-AT--------------------ATCtaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagTCCAA---A--T-------G-C-ATAAAAACTGAAGGCTGTAATGGTTACGT-GATAATTTCTTCCG----AAGAT-----ATCAATTGTAATTTAA---CTaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : AGTATAA---GATGAGAA--AACATA--------ATTTGT------C-TT--CTAATTGTT--G-AAA--TGTTCT------TT-----------------------T--------------------------------------------TCC-CC-----C----------C-C-C-----CC---C-CCC-------C-C--C--C--C--CCAAAAAGC----CCT--------CCC-AC--------------------ACCAACCCTAA-----CAGTTTAAACCTGTTCAGATCCGCTCCTttttcttccgcagtaattatttcaattatttttagtataagatgagaaaacataatttgtcttctaattgttgaaatgttctttttcccccccccccccccccccccaaaaagccctcccacaccaaccctaacagtttaaacctgttcagatccgctcctcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
gi|9 : tccaaatgcataaaaactgaaggctgtaatggttacgtgataatttcttccgaagatatcaattgtaatttaactttttcttccgcagtaattatttcaattatttttG----AGCAT-----AT-AGT--TAGTTTATTTTCTTTCAAACG---GCGAGA-TAATGTCA--TGA-CTTAAGCGGCGCCATAA--GCAATGATT----AT-TCAAACGATATAAAA--T--TTATAACTGC-TTTCCTAACCTTACTAATAT-G-------TAT-T-------ATAACA-GTGACAAAC--AAAATGCCACATTAACGCTGACATATAG---CATAAGAA--CGCAAT--------AGTTGC------C-TT--CTAGTTTTC--A-AAA--ATTTCT--------------------------------------------------------------------------------------------------C-C-T-----AC---A-CTT-------A-C--CCTC--C--ACTCGTACCGTCGCTG--------CTC-ATGTTGAAGCTATGCTATGCAGATATGCCAT-C-----CAGTTCAAATTCATTCAGGAACGcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): TCTTAGACCCTGGTCATAATGATTAATAGCGTTCTTATACTTTAACGGTACTTTATTAGAAATATTTA
Unaligned ( gi|39 ): TACATAATGAGTCAAAAAAATTTCTTTGCTTATATAA
Alignments
lowQualScore : 111111 11111 11111111 77777777777777777777777777777777777777777777777777777777777777777777777 22222222222222222222222222222222 11 11111111111111111111
lowQualScore : 2 4444 333 0 22 22 1 333 22 111111 2 2 1 4 5 4444 55555 1 444 888 1 1 999 1 44 0 6666 3 9 88 22222 0 2 9999999 2 9999999 2 33 1 1 0 222 5555 66666666 444444 1 22 22 1 1 44444444444444444444444444444444444444444444444444444444444444444444444 1 5555555 1 22 33333333333333333333333333333333 333 1 5 1 22 55 88 66666666 66666666 1 77777777777777777777 1 44444
lowQualScore : . .... ... . .. .. . ... .. ...... . . . . . .... ..... . ... ... . . ... . .. . .... . . .. ..... . . ....... . ....... . .. . . . ... .... ........ ...... . .. .. . . ....................................................................... . ....... . .. ................................ ... . . . .. .. .. ........ ........ . .................... . .....
lowQualScore : 1 5555 333 4 88 99 1 333 66 666666 1 1 2 4 6 5555 66666 5 111 888 4 9 555 6 22 8 5555 1 1 55 22222 2 9 3333333 9 3333333 9 99 0 0 7 777 6666 22222222 444444 5 11 11 5 5 88888888888888888888888888888888888888888888888888888888888888888888888 5 0000000 5 11 00000000000000000000000000000000 222 8 5 8 33 00 66 66666666 33333333 7 77777777777777777777 8 55555
consensus : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------G--G-----G----------G---------A---------AA-ACC-------C-C--C--------C-C---------C--C-----A--C---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
Reference ( family-2564 ) : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------G--G-----G----------G---------A---------AA-ACC-------C-C--C--------C-C---------C--C-----A--C---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
gi|1 : ATCAGGCGCGTATC-GGGCATACGCACGGACGCC-AAT----GCGTACAATTCG---TCCGCAAAATGTGAAAACAT--AAAAC--CTCTAA---A--CA-----TG-C-ATAAAAACTGAAGGCTGAGAGATTTATGT-GCCCATTTCTTCCA----AATAT-----ATAAGTTGTAATTTAC---CTGTAAGACA---TCGAGATTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTG-GGTCAAAGTT-TAGAACTATTTAAAGTCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CCG-T-------GT----------------AAAATGCAAGATTGAGGCTGAAATATAA---CATGAGAT--TACAGC--------ATTTGT------C-TT--CTAATTTCC--A-AAATGTTCT------TG-----------------------G--T-----G----------G---------AG--------AG-ACC-------C-C--C--------A-CTCACTGGTTC--T-----A--C---A-CCTA-C-CCAC--T--AC--------TTGCAGCCTCGCTG--------CTC-AT--------------------ATTTTACGT-A-----CAGTTCAAGCCC
gi|10 : aaaaagtatgtttacacacatatagatgattaacgatcataaacagagaagcatatcggtaacttcaaaccgtaagtccttgataataaagaaagtaatcatataactatacagatatttATTTCTCCCGCTGGAATG------ATTTGTGGTAATTTAC---CTATctgattatacactct
gi|10 : ctAAAT-TAA---CATGAGAA--AACACC--------ATTTGT------C-TT--CTAATTTCT--A-AAATGTTCT------TG-----------------------G--A-----G----------G---------AGACCCCCA-AA-ACC-------C-C--C--------CTC---------C--C-----A--T---A-CCCA-C-CT-C--C--GC--------TGGCAGCATCGCTA--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAACATGTTCAAATACGGCCCTttctcccgcagttattatttcaaatattttttaaattaacatgagaaaacaccatttgtcttctaatttctaaaatgttcttggaggagacccccaaaacccccctcccatacccacctccgctggcagcatcgctacttatatctggcgtacagttcaaacatgttcaaatacggccctgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : ctatttctcccgctggaatgatttgtggtaatttacctatttctcccgcagttattatttcaaatattttttCAGGCGCATATCCAGGCATACGCGCGTGCGCA-AAT----GCGTACAATTCG---TCATCTAAATGGGGAAACAT-----AA--CGCAAA---G--TA-----TG-C-AT-AGAACTGAAGGCTGAAATGGTAATGT-GCTAATTTCTgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : gtagatcatctctgatagctgcatataaacattgaCGTTAGCGGCGTGACAA--TCTAAGACC----TT-TAAAACGATTTCAGATAGTTAT--TTT---TGTTCTCTAACATTGCTAATTT-G-------AAG-T-------ATAAAA-GTGACAAAC--AAAATGCAAGATGGAGGCTGcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|11 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcct-----G----------A---------A---------GA-GCC-------C-CACC--------C-T---------C--C-----A--C---A-CCTA-C-CA-C--C--AC--------TTGCAGCATCGCTA--------CTC-AT--------------------ATTTGTCGT-A-----CAGTTCAAACCCGTTCCGTTACGCCCCTtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|12 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATgat
gi|12 : gtttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAATATTCT-------------------------------------------------------------ACCCCCACCCAA-ACC-------T-C--T--------C-C---------CTCC-----T--C---C-CCTC-C-C--CTAC--AC--------CTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctga
gi|13 : gtttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATga
gi|13 : tttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAATATTCT-------------------------------------------------------------ACCCCCACCCAA-ACC-------T-C--T--------C-C---------CTCC-----T--C---C-CCTC-C-C--CTAC--AC--------CTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctg
gi|14 : tttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaTGAGACAGTGTCATGACTTCTGCCG-ATCTGTGCGGGTGGCACAATGA--GCTATGATT----TT-AAAAACAATTAAAAATGGTTAT--TTA---CATTTCCTAACATTGCTTATAT-G-------TAGTT-------ATAAAA-GTGAC---C--AAAAGGCCACGTTAATGCTGAAATATAG---CATGAGAA--TGCATC--------ATTTCA------T-TT--CTAATTTTC--A-AAATGTTCA------CG-----------------------G--G-----G----------G---------A---------TG-ACC-------T-C--g
gi|15 : tggctttgttgtttagggttaaatgacaatcaactctcgcagcatcatgagcatggctaggcctatattttggagtcatattggatattgtattttatttgtttcaaaactttcaaacggCAGGCGCGTATCGAAGCATACGCACGTACGCC-AGT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGAAA--TTCCAA---A--TA--------C-ATAAAAACTTAAGGCTGAGAGGGTTACGT-GCT---------------AATAT-----ATCAGTGGTAA-TTAC---CTATaaacct
gi|15 : gaatgaAAAGATAA---CATGAGAA--AACATC--------ACTTGT------C-TT--AAAATTTCT--A-AACTTTTCT------TG-----------------------G--C-----G----------G---------A---------CA-ACCACAAAATC-C--C--------C-CTT-------C--C-----A--C---A-CCAAAC-C--C--C--AC--------TTGCAGCATCGCTG--------CTG-AT--------------------ATCCGGCGT-A-----CAGTTAAAACCTGTTCAGATACGCCCCTttctcacgcagtaattgttttatttatttttaaagataacatgagaaaacatcacttgtcttaaaatttctaaacttttcttggcggacaaccacaaaatcccccttccacaccaaaccccacttgcagcatcgctgctgatatccggcgtacagttaaaacctgttcagatacgcccctgaatg
gi|16 : gaatgacaggcgcgtatcgaagcatacgcacgtacgccagtgcgtacaattcgtcagcaaaaagtgaaaacatagaaattccaaatacataaaaacttaaggctgagagggttacgtgctaatatatcagtggtaattacctatttctcacgcagtaattgttttatttatttttCGCGTACCCAGGCATACGCACGTACGCC-AAT----G--------------TCGAAAAAAATCGAATACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGTTGAGAGGGTAACAT-GCTGATTTCTTTCG----AATAT-----ATCAGCAGTATTTTAC---CTATgaatg
gi|16 : aAAATATAA---CATGAGAA--AACATC--------ATTTATTTTTTTC-TT--CTAATTTTC--C-AAGTTTTCTCTCCCATC-----------------------A--C-----C----------G---------CCCC------AA-ACC-------CAC--C--------T-C---------C--C-----A--C---A-CCTAGC-C--C--T--AG--------TTGTAGCATCGCTG--------CTT-AT--------------------ACCAGGGAT-A-----TATTTCAAACCTGTTCTGATACATCTCTtctcatgcagtgactatttcaatgttttctaaatataacatgagaaaacatcatttatttttttcttctaattttccaagttttctctcccatcaccgccccaaacccacctcccacacctagccctagttgtagcatcgctgcttataccagggatatatttcaaacctgttctgatacatctct
gi|17 : acgcgtacccaggcatacgcacgtacgccaatgtcgaaaaaaatcgaatacataaaaactccaaatatgcataaaaactgaaggttgagagggtaacatgctgatttctttcgaatatatcagcagtattttacctattctcatgcagtgactatttcaatgttttctCAGGCGAGTGTCCAGGCATACGCAAGTGCGCC-AA-----GCGTACAA-TAG---TCAGCAAAGACTGAGA
gi|17 : cAAGACTGAGAGGGTTATCT-GCTAATTTCTTTCG----AATAT---------------------------CGAGAC-----------TCCTGTCG-TTCAGCGTGAGCGGCGAGACAA--TCTATGA-T----TT-TAAAATGATTTAAAATCGTTAT--TTT---TGTTTCTAAACATTAATAA-GT-AATAAATTCAG-T-------ATAAAA-GAGACAAAC--GAAATTCAAGATTGAGGCTGAAATATAGCTCCATGTGAA--CACGTCACTGATG-ATTTAT------C-TT--CTAGTTTCC--T-AACTTTTCT------TG-----------------------G--T-----G----------T---------A---------CA-GCC-------T-C--T--------C-T---------C--gggttatctgctaatttctttcgaatatcgagactcctgtcgttcagcgtgagcggcgagacaatctatgattttaaaatgatttaaaatcgttatttttgtttctaaacattaataagtaataaattcagtataaaagagacaaacgaaattcaagattgaggctgaaatatagctccatgtgaacacgtcactgatgatttatcttctagtttcctaacttttcttggtgtacagcctctctctccca
gi|18 : ccaggcgagtgtccaggcatacgcaagtgcgccaagcgtacaatagtcagcaAAAACGTCAAGAAA--CTCTAG---A--TA--------C-ATTAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCA----ATTAC-----AACAGTGATAATTTAC---ATGTAtccca
gi|18 : acaattagttcgcctgtaaatttcctcAAGTATAA---CATGAA-----GCATC--------ATTTGT------C-TT--CTAATTTCT--A-AAATGTTCT------TG-----------------------T--G-----G----------G---------G---------AG-ACC-------C-C--CAAAATCTCC-C---------T--C-----ATAC---A-CCTA-C-CT-C--C--AA--------TTGCAACATCGCTG--------CTT-AT--------------------ATCTAGTGT-A-----CAGCTCAAAACTGTTCAGGTTCGCCCCTtatctcccgcagtaattatttaaaccattttaagtataacatgaagcatcatttgtcttctaatttctaaaatgttcttgtggggagacccccaaaatctccctcatacacctacctccaattgcaacatcgctgcttatatctagtgtacagctcaaaactgttcaggttcgcccctgat
gi|19 : acaattagttcgcctgtaaatttcctcaaaacgtcaagaaactctagatacattaaaactgaaggctgagagggttacgtgctaatttcttccaattacaacagtgataatttacatgtatatctcccgcagtaattatttaaaccattttTCATGACGTGTCACGGTAAGCGGCGTATTAA--GCAGTGATT----TT--AACACGATTAAAAA-AATTAT--TCTTCACGTTTCCTAACCTTGCTAATAT-G-------TAA-TTTAATAGATAAAAAGTGACAAAA--GAAATGCTATATTTAG-CTGAAATATAG---TATGAGAT--CGCAAC--------ATTTAC------T-TT--CTAAATTTC--A-CAACTTTCT------TGATA--------------------G--A-----G----------G---------AC--------AA-ACC-------C-C--C--------gat
gi|2 : aatcgactttcacagccattatgagcacgcatgcattatagattcatattgacaactaaagttaatttattttattttgaatggcgaaaataTCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGC-AAAAGTGAAAACAT--AACAA--CTCCAA---A--TA-----a
gi|2 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgtCGTGGGCCGCGTGATAA--GCTATGCTT----TT-TAAAACGATTT-----------------------TTCTAACCTTTCTTATAT-G-------TAA-T-------ATAAAA-GCGACAAAT--AAA-TGCCAAATTAACGTTGAAATATAG---CACGAGAA--CGTAAC--------ATTTGC------C-TT--CTGATTTTC--A-AAATGTTCT------TG-----------------------A--T-----G----------G---------ATTCC-----AA-ACC-------C-C--C--------A-C---------C--G-----A--CGGGA-GTTG-C-C--C--TCAAC--------TCGTAGTACCGCTGCTACGCTACTT-AG--------------------ATCTGGCAT-A-----CAGTTCAAATTCGTTCAGGTACGaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgacgtgggccgcgtgataagctatgctttttaaaacgatttttctaacctttcttatatgtaatataaaagcgacaaataaatgccaaattaacgttgaaatatagcacgagaacgtaacatttgccttctgattttcaaaatgttcttgatggattccaaacccccaccgacgggagttgccctcaactcgtagtaccgctgctacgctacttagatctggcatacagttcaaattcgttcaggtacgac
gi|20 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgttcaggcgcgtatccaggcatacgcacgtacgccaatgcgtacaattcgtcagcaaaagtgaaaacataacaactccaaataaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgaCAGGCGCGTATCCTGGCATACATACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGACA--CTCAAA---A--TA--------C-AT-AAAACTGAAGATTCAGAGAGTTACGT-GCTAATGTCTTCCG----AATATACATAATAAGTGGAGGTTTAC---CTATac
gi|21 : aacagctatatttcacagatcgatatgtaagcgattacatacgagggcttgtcaataaattatattaggcatagtaatataaaaccaaaatatctatttcaagactatacattaaTAAGATATAA---CATGAGAA--AACATC--------ATTTAT------C-TT--CTAAGTTCC--A-AAATTTTCT------TG-----------------------G--G-----GAGGTCTCCGAG---------ACTCTT----AA-ACC-------C-C--C--------CTC---------C--C-----A--C---T-CCTA-T-CT-C--C--AC--------TTGCATCACC--TG--------CTT-AT--------------------ATTTGGCAA-A-----CAGTTCAAATTTGTTCAGGTACACTCCTttctcccgcagtaattatttca
gi|22 : gtaattatttcaattatttTGAGACA---TCGAGACTTTTGTCA-GTCAGC--------------------TATGACT----AT-TAAAACGGTTTAAAATCGTTAT--TTA---TGTTTCCTTACATTGCTAATGT-G-------CAT-T-------ATAAAA-GTGACAAAC--AAAACGCAAGATTGAGGCGGAAATAAAG---TATGAGAA--CACATC--------ATTTGT------C-TT--CTTATTTCC--T-AAATGTTCT------TG-----------------------A--GGGGGTG----------G---------A---------GA-A--------------------------------------------A--G---A--------------C--AC--------TTGCAGCATTGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAATTCAAATCCGTCCAGGTACGCCCCTggcagctggcaaatttgactttgtcccgcgatattctacaaccaaccatcttatatatttatacattattttgtcaagatattt
gi|23 : CGTGAATGGCGTGACAA--GCTATGATT----TT-TAAAATGAT-----AT----AT--TT------------AACCTTGCTAATAT-A-------TAG-T-------ATAAAA-ATGACGGGT---AAATGCCATATT
gi|24 : ccaaatatgtaataagatgggtattgcttcctggctccgctgttttaaaaaatcaaatgacaatcgactttcacagccatcatgagcattaatgcattatggattaatattgattactgaaagtttattttctttcaaacggcaaggcagtgccatgaACCAGGTGCGTACCCAGGCTTACGCACATACGCC-AAT----ACGTACAATTCG---TCAGC-AAAAGTGAAAGAAT--A
gi|24 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacAATATAG---CATGAGAA--TACATC--------ATTT-T------CATT--CTAATTT----------------------G-----------------------T--G-----G----------G---------A---------GA-CCC-------C-C--CGACAA---C-C---------T--T-----A--C---T-CACA-C-C--C--C--AC--------TTGCAGCGTCGCTG--------CTG-AT--------------------AACTGGTGT-A-----CAGTTCAAACCCGTCCAAGTACACCCtagcatgagaatacatcattttcattctaatttgtgggagaccccccgacaaccttactcacaccccacttgcagcgtcgctgctgataactggtgtacagttcaaacccgtccaagtacaccct
gi|25 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacaccaggtgcgtacccaggcttacgcacatacgccaatacgtacaattcgtcagcaaaagtgaaagTTGCTAATGT-G-------TAG-C-------ATAAA-----------------TGCCACATTAACGCTGAAATATAG---CACGAGAA--CGCAAC--------ATTTGC------C-TT--CTAATTTTC--A-AAATATTCT------TGATGCCGTCCAAACTCCCACGGACG--G-----GAGTT------G---------G---------AG-AAT-------C-C--C--------T-C---------C--T-----A--T---A-CTTG-C-C--C--TCAAC--------TCGAAGTGTCGTTA--------CTCGATTCGAA---------------GCCTGACGT-A-----CAGTTCAAATTCGTTCAGGTACACCCt
gi|26 : tgtgttgtttatatgcctAA---A--TA--------C-ATAAAAACTGAAGACTGAGAGGGTCGCGT-GCCATTTTTTTCCG----ATTAG-----ATCCGTGGAAAGTTAC---ATAT
gi|26 : AAACATAA---CATGAGAA--AAAATC--------ATTTGT------T-TTTTCTAATTTCTTAA-AAAAATTCT------TA-----------------------G--G-----G----------ACAGAACCCAA---------AA-ATC-------C-C--C--------CTC---------C--C-----A--C---A-CATAAC-C--C--C--AC--------TTGCAACATCACTG--------CTT-AT--------------------ATCTttcatccgtagtaattattttaattgtttttaaacataacatgagaaaaaatcatttgttttttctaatttcttaaaaaaattcttagggacagaacccaaaaatccccctcccacacataaccccacttgcaacatcactgcttatatct
gi|27 : aaatacataaaaactgaagactgagagggtcgcgtgccatttttttccgattagatccgtggaaagttacatatttcatccgtagtaattattttaattgtttttCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GTGTACAAATTGAAGTCAGCAAAAAGTTAAAACAG--AAAAA---------------A-----CG-C---------TGAAGGCTGAGAGGATAACAT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---TTA
gi|28 : ttccttggaagacaatcgCAATTCG---TCAGC--AAATTAAAAGCAT--AAAAG--GCTGAA---A--TA-----Tcttctcccgcagtaattatttttggta
gi|28 : AGGCTGAAATATTG---TACGAGAAAACGCGTG--------ATTTAT------C-GT--CTTATTTCA--C-AAATGTTCTAGA---TA-----------------------G--T-----G----------G---------A---------AG-CCC-------C-C--CGAAGA---C-C---------T--C-----A------A-CCTA-A-C--T--CG-AC--------TCGCAGCGCCCATG--------TTC-AT--------------------AACTGGCGC-A-----CAGTTCAAACCCATCCAGATACGtgtacgagaaaacgcgtgatttatcgtcttatttcacaaatgttctagatagtggaagccccccgaagacctcaacctaactcgactcgcagcgcccatgttcataactggcgcacagttcaaacccatccagatacgaca
gi|29 : caattcgtcagcaaattaaaagcataaaGCATCCAGGCATACGCACGAACGAC-AAT----ATGTACAATTCG---TCAGTAAAAAGTGAAAAC----AAAAA--CTCCAA---A--TAGATC-TA-C-ATGTAAACTGGCGGTTGACAGAGTTATGT-GCTTGATTCTTCCC----A---------GGCAGTGGTAATTaca
gi|3 : aaatagtccttagacaAATCAGGCGCGTTCTCGGGCATATGCACGTACGCC-AAT----GCGTACAAGTCG---TCTGCAAAATGTGAAAACAT--AAACG--CTCCAA---A--TA-----TG-C-ATAAAAACTCGAGGCTGAGACGGTTAGGT-GTTTATTTCTTCCG----AATAT-----ATCAGTTGTAATTTAC---CTGTAAGACA---TCGAGACTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTACGCTT----TT-TAAAACGATTTAAAATTGCTGT--TTT---TGTTTTCTTACATAACTGATGT-G-------CAT-T-------ATAAAA-GTGG-AAACCGAAAATGCAAGATTGAGGCTGCAGTATAA---CACGAGAA--CACATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATGTCCA------TG-----------------------G--G-----G----------G---------A---------AA-AGC-------C-C--C--------T-T---------C--C-----A--C---A-CCTA-T-C--C--C--AC--------TTGCAGCAACCCTG--------TTC-AT--------------------ATTTGGCGT-A-----CAGTTCAAACCAGTTCAGGTACGCCCCTatttcattaatttt
gi|30 : TCAGGCACATATCCAAGCATACGTACGTATGCC-AAT----GTGC-----------------AAAAGTGAAAACAT--AAAAG--TTCCAA---A--TA-----TA-CAATAAAAACTGAAGACTGAG
gi|31 : tagtacaattaaaaacaaaattattatatatatccagtacacATGCC-AGT----GGGTACAATTCG---TCAGCAAAAAGTGAAAACGT--AAAAAAACTCAAA---A--CA-----TG-C-ATAAAAACGGAAGGCTTGGAGGGTTACGT-GTTAATTTCTTCCG----AATAT-----ATCACCAGTAATTTAC---CTATtgaatgtcaggccttggtttactc
gi|32 : AGTCCGGTGCGTATCCAGAAACACGAACGTATGCC-AAT----GCGTACAATTCG---TCGGCAAAATGTGAAAACAT--ACAAA--CTCTAATTCA--CA-----TGTC-ATAttcttccgcagcaattatttt
gi|33 : ctgaaatgaaaaaaaaatataattatacctgtatgtaatttagctatAAATGCCATATTTACGCTGAAATATAG---CACGATAA--CGCAAC--------ATTTGC------T-TT--CTAATTTTC--A-AAATTTTCT------TG-----------------------A--T-----G----------G---------AGGCC-----AA-ACC-------C-C--C--------
gi|34 : CAGGCGCGTATCCGGGCATGCGCACGTACGCCAAATCCCGGCGCACAATTCG---TCAGCAAAAAGTGAAAAC
gi|35 : ctttacagcTCGCTA--------CAC-AG--------------------ATCTGGCGT-AGCGTACAGTTAAAATTTGCCCATTTGCGCCCCTt
gi|37 : cagcttgatTCGCTA--------CAC-AG--------------------ATCTGGCGT-A-----CAGTTAAAATTCGTCCAGTTGCGCCCgaatacta
gi|38 : ctcgctgcttgatAAATATGA---CATGAGAA--AACACC--------ATTTGT------C-TC--CTTATTTCT--A-AAGTTATCT------T
gi|4 : CAGGTGCGTATC-AGGCAAACGCACGCGCGCC-AAT----GTGTACAGTTCG---TCAGGAAAATGTGAAAACAT--AAAAA--CTCAAA---AAATA-----TG-C-ATAAAA-CTGAAGACAGAGATGGTTATGT-GCTCATTTCTTCCA----TATAT-----ATATGTGGTAATTTAC---CTTTACGACA---TCGAGACGCATGTCG-GTCATTGGGAGTGGCCTGATAG--GTTATGATT----TTTTAAAACGATTCAAAATCGTTAT--TTT---TGTTTCCTAACATTGCGTATGT-C-------CAG-T-------TTAAAA-GTGATAAAC--AAAATGCAAGATTGAGATTGAAATATAA---CACGAGAA--CACACC--------AGTTGT------C-TT--CTTAATTCC--A-AAATTGTCC------TG-----------------------G--T-----G----------G---------a
gi|4 : TC-AT--------------------ATTTGGCTT-A-----CAGAGCAAACCCGTCCAGGTACGCCCCTggtggggggatcatatttggcttacagagcaaacccgtccaggtacgcccctga
gi|5 : caggtgcgtatcaggcaaacgcacgcgcgccaatgtgtacagttcgtcaggaaaatgtgaaaacataaaaactcaaaaaatatgcataaaactgaagacagagatggttatgtgctcatttcttccatatatatatgtggtaatttacctttacgacatcgagacgcatgtcggtcattgggagtggcctgataggttatgattttttaaaacgattcaaaatcgttatttttgtttcctaacattgcgtatgtccagtttaaaagtgataaacaaaatgcaagattgagattgaaatataacacgagaacacaccagttgtcttcttaattccaaaattgtcctggtggggtggggggaTGTC---TCGACGTGAGCGGCGTGATAA--GCTGTGA--------------CGATTTAAAATTGTTGTAATTC---GGTTTCCGAACCTTGCTAATGTTA-------TAG-T-------ATAAAA-ATGGCAAAT--AAAATGTCACATTTACGCTCAAATATAG---CACGAAAA--TGTAAG--------ACTTGC------C-TT--TTAATTTTC--A-AAA-ATTGT---------------------------------------------------------------------------CC-------C-C--C--------T-C---------C--T-----T--C---A-CTTA-CAC--T--T--ACTGCTCGAGTTGAAGCTACGCTA--------CTC-TG--------------------AGATGACTT-A-----CAGTTCAAGTTCGTTCAAGTATGCga
gi|6 : atcaaatgtgatgcgaggggtattgccgcatgaatctgttgtttaggtttcaaatgacaatcgacattcgcagccttcatgagcatgaatgtattatataggtacacatgactggtgtaggtagtttatttttttcaaacggcgatacat---TCAGCAAAATGCGAAAACCT--AAAAA--CTCGAA---A--TA-----TG-C-ATAAAAACTGAAAGTTTAGAGGGTTATGT-GCTAATTTCTTCTG----AATAT-----ATCAATTGTAATTTTC---CTATAAGACA---TCGAGACTCTTGTCT-GTCAGCGTTAGTGGCATAACAAGTGCTATGATT----TT-TAAAACAATTTAAAATTGTTAT--TTT---TGTTTCCTAGCATTGCTAATGT-G-------CTG-T-------A-AAAA-GTGACAAAC--AAAATGCAAGATTGAGGCTGAAATATTG---CATGAGAA--CACTTC--------A-TTGT------C-TT--CTAATATCA--ATATATTTTCT------TG-----------------------GCAG-----A----------G---------A---------GATACT-------C-T--C--------C-CTGA------T--G-----A--C---ATCCTT-T-G--C--C--AC--------TTGCAGCATTGCTG--------TAT-AT--------------------ATTTGGCAT-A-----CAGTTTAAACCCGTTCAGGTATGCCC
gi|7 : ttaGCGCGTATCCAAACATACGCACGTACGCC-AAT----ACGTACAATTCG---TCAGCAAAAAGTTAAAACAT--AGAAA--CTTCAA---A--TAGCATCTA-C-ATAAAAACTAAAGGCTGAGAAGGTTA-----CTAATTTCTTCCA----AATA
gi|7 : ctttaaacataatAAATATAA---CATGAGAC--AAAATT--------GTTTGT------C-TT--CTAATTTCT--A-AAATTTTCT------TT-----------------------A--G-----A----------G---------A---------GA-CCC-------C-C--C--------C-C---------C--C--------------CCCC-C-C--C--C--CC--------TTattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|7 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttat---------AA-ATT-------C-C--C--------C-T---------C--CTCAGTA--C---A-CCTA-C-C--C--CC-AC--------TTGCAACATCGCTG--------CTT-AT--------------------ATCtaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagTCCAA---A--T-------G-C-ATAAAAACTGAAGGCTGTAATGGTTACGT-GATAATTTCTTCCG----AAGAT-----ATCAATTGTAATTTAA---CTaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : AGTATAA---GATGAGAA--AACATA--------ATTTGT------C-TT--CTAATTGTT--G-AAATGTTCT------TT-----------------------T--T---------------------------------------CCC-------C-C--C--------C-C---------C--C-----C--C---C-CCCC-C-C--C--C--A-------------AAAAGCCCT---------CCC-AC--------------------ACCAACCCTAA-----CAGTTTAAACCTGTTCAGATCCGCTCCTttttcttccgcagtaattatttcaattatttttagtataagatgagaaaacataatttgtcttctaattgttgaaatgttctttttcccccccccccccccccccccaaaaagccctcccacaccaaccctaacagtttaaacctgttcagatccgctcctcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
gi|9 : tccaaatgcataaaaactgaaggctgtaatggttacgtgataatttcttccgaagatatcaattgtaatttaactttttcttccgcagtaattatttcaattatttttG----AGCAT-----AT-AGT--TAGTTTATTTTCTTTCAAACG---GCGAGA-TAATGTCA--TGA-CTTAAGCGGCGCCATAA--GCAATGATT----AT-TCAAACGATATAAAAT--TTATAACTG---C-TTTCCTAACCTTACTAATAT-G-------TAT-T-------ATAACA-GTGACAAAC--AAAATGCCACATTAACGCTGACATATAG---CATAAGAA--CGCAAT--------AGTTGC------C-TT--CTAGTTTTC--A-AAAATTTCT----------------------------------------------------------------------------------------------------C---------C--T-----A--C---A-CTTA-C-CCTC--C--AC--------TCGTACCGTCGCTG--------CTC-ATGTTGAAGCTATGCTATGCAGATATGCCAT-C-----CAGTTCAAATTCATTCAGGAACGcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): TCTTAGACCCTGGTCATAATGATTAATAGCGTTCTTATACTTTAACGGTACTTTATTAGAAATATTTA
Unaligned ( gi|39 ): TACATAATGAGTCAAAAAAATTTCTTTGCTTATATAA
Alignments
lowQualScore : 111111 11111 11111111 77777777777777777777777777777777777777777777777777777777777777777777777 22222222222222222222222222222222 11 11111111111111111111
lowQualScore : 2 4444 333 0 22 22 1 333 22 111111 2 2 1 4 5 4444 55555 1 444 888 1 1 999 1 44 0 6666 3 9 88 22222 0 2 9999999 2 9999999 2 33 1 1 0 222 5555 66666666 444444 1 22 22 1 1 44444444444444444444444444444444444444444444444444444444444444444444444 1 5555555 1 22 33333333333333333333333333333333 333 1 5 1 22 55 88 66666666 66666666 1 77777777777777777777 1 44444
lowQualScore : . .... ... . .. .. . ... .. ...... . . . . . .... ..... . ... ... . . ... . .. . .... . . .. ..... . . ....... . ....... . .. . . . ... .... ........ ...... . .. .. . . ....................................................................... . ....... . .. ................................ ... . . . .. .. .. ........ ........ . .................... . .....
lowQualScore : 1 5555 333 4 88 99 1 333 66 666666 1 1 2 4 6 5555 66666 5 111 888 4 9 555 6 22 8 5555 1 1 55 22222 2 9 3333333 9 3333333 9 99 0 0 7 777 6666 22222222 444444 5 11 11 5 5 88888888888888888888888888888888888888888888888888888888888888888888888 5 0000000 5 11 00000000000000000000000000000000 222 8 5 8 33 00 66 66666666 33333333 7 77777777777777777777 8 55555
consensus : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------G--G-----G----------G---------A---------AA-ACC-------C-C--C--------C-C---------C--C-----A--C---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
Reference ( family-2564 ) : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------G--G-----G----------G---------A---------AA-ACC-------C-C--C--------C-C---------C--C-----A--C---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
gi|1 : ATCAGGCGCGTATC-GGGCATACGCACGGACGCC-AAT----GCGTACAATTCG---TCCGCAAAATGTGAAAACAT--AAAAC--CTCTAA---A--CA-----TG-C-ATAAAAACTGAAGGCTGAGAGATTTATGT-GCCCATTTCTTCCA----AATAT-----ATAAGTTGTAATTTAC---CTGTAAGACA---TCGAGATTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTG-GGTCAAAGTT-TAGAACTATTTAAAGTCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CCG-T-------GT----------------AAAATGCAAGATTGAGGCTGAAATATAA---CATGAGAT--TACAGC--------ATTTGT------C-TT--CTAATTTCC--A-AAATGTTCT------TG-----------------------G--T-----G----------G---------AG--------AG-ACC-------C-C--C--------A-CTCACTGGTTC--T-----A--C---A-CCTA-C-CCAC--T--AC--------TTGCAGCCTCGCTG--------CTC-AT--------------------ATTTTACGT-A-----CAGTTCAAGCCC
gi|10 : aaaaagtatgtttacacacatatagatgattaacgatcataaacagagaagcatatcggtaacttcaaaccgtaagtccttgataataaagaaagtaatcatataactatacagatatttATTTCTCCCGCTGGAATG------ATTTGTGGTAATTTAC---CTATctgattatacactct
gi|10 : ctAAAT-TAA---CATGAGAA--AACACC--------ATTTGT------C-TT--CTAATTTCT--A-AAATGTTCT------TG-----------------------G--A-----G----------G---------AGACCCCCA-AA-ACC-------C-C--C--------CTC---------C--C-----A--T---A-CCCA-C-CT-C--C--GC--------TGGCAGCATCGCTA--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAACATGTTCAAATACGGCCCTttctcccgcagttattatttcaaatattttttaaattaacatgagaaaacaccatttgtcttctaatttctaaaatgttcttggaggagacccccaaaacccccctcccatacccacctccgctggcagcatcgctacttatatctggcgtacagttcaaacatgttcaaatacggccctgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : ctatttctcccgctggaatgatttgtggtaatttacctatttctcccgcagttattatttcaaatattttttCAGGCGCATATCCAGGCATACGCGCGTGCGCA-AAT----GCGTACAATTCG---TCATCTAAATGGGGAAACAT-----AA--CGCAAA---G--TA-----TG-C-AT-AGAACTGAAGGCTGAAATGGTAATGT-GCTAATTTCTgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : gtagatcatctctgatagctgcatataaacattgaCGTTAGCGGCGTGACAA--TCTAAGACC----TT-TAAAACGATTTCAGATAGTTAT--TTT---TGTTCTCTAACATTGCTAATTT-G-------AAG-T-------ATAAAA-GTGACAAAC--AAAATGCAAGATGGAGGCTGcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|11 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcct-----G----------A---------A---------GA-GCC-------C-CACC--------C-T---------C--C-----A--C---A-CCTA-C-CA-C--C--AC--------TTGCAGCATCGCTA--------CTC-AT--------------------ATTTGTCGT-A-----CAGTTCAAACCCGTTCCGTTACGCCCCTtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|12 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATgat
gi|12 : gtttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAATATTCT-------------------------------------------------------------ACCCCCACCCAA-ACC-------T-C--T--------C-C---------CTCC-----T--C---C-CCTC-C-C--CTAC--AC--------CTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctga
gi|13 : gtttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATga
gi|13 : tttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAATATTCT-------------------------------------------------------------ACCCCCACCCAA-ACC-------T-C--T--------C-C---------CTCC-----T--C---C-CCTC-C-C--CTAC--AC--------CTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctg
gi|14 : tttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaTGAGACAGTGTCATGACTTCTGCCG-ATCTGTGCGGGTGGCACAATGA--GCTATGATT----TT-AAAAACAATTAAAAATGGTTAT--TTA---CATTTCCTAACATTGCTTATAT-G-------TAGTT-------ATAAAA-GTGAC---C--AAAAGGCCACGTTAATGCTGAAATATAG---CATGAGAA--TGCATC--------ATTTCA------T-TT--CTAATTTTC--A-AAATGTTCA------CG-----------------------G--G-----G----------G---------A---------TG-ACC-------T-C--g
gi|15 : tggctttgttgtttagggttaaatgacaatcaactctcgcagcatcatgagcatggctaggcctatattttggagtcatattggatattgtattttatttgtttcaaaactttcaaacggCAGGCGCGTATCGAAGCATACGCACGTACGCC-AGT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGAAA--TTCCAA---A--TA--------C-ATAAAAACTTAAGGCTGAGAGGGTTACGT-GCT---------------AATAT-----ATCAGTGGTAA-TTAC---CTATaaacct
gi|15 : gaatgaAAAGATAA---CATGAGAA--AACATC--------ACTTGT------C-TT--AAAATTTCT--A-AACTTTTCT------TG-----------------------G--C-----G----------G---------A---------CA-ACCACAAAATC-C--C--------C-CTT-------C--C-----A--C---A-CCAAAC-C--C--C--AC--------TTGCAGCATCGCTG--------CTG-AT--------------------ATCCGGCGT-A-----CAGTTAAAACCTGTTCAGATACGCCCCTttctcacgcagtaattgttttatttatttttaaagataacatgagaaaacatcacttgtcttaaaatttctaaacttttcttggcggacaaccacaaaatcccccttccacaccaaaccccacttgcagcatcgctgctgatatccggcgtacagttaaaacctgttcagatacgcccctgaatg
gi|16 : gaatgacaggcgcgtatcgaagcatacgcacgtacgccagtgcgtacaattcgtcagcaaaaagtgaaaacatagaaattccaaatacataaaaacttaaggctgagagggttacgtgctaatatatcagtggtaattacctatttctcacgcagtaattgttttatttatttttCGCGTACCCAGGCATACGCACGTACGCC-AAT----G--------------TCGAAAAAAATCGAATACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGTTGAGAGGGTAACAT-GCTGATTTCTTTCG----AATAT-----ATCAGCAGTATTTTAC---CTATgaatg
gi|16 : aAAATATAA---CATGAGAA--AACATC--------ATTTATTTTTTTC-TT--CTAATTTTC--C-AAGTTTTCTCTCCCATC-----------------------A--C-----C----------G---------CCCC------AA-ACC-------CAC--C--------T-C---------C--C-----A--C---A-CCTAGC-C--C--T--AG--------TTGTAGCATCGCTG--------CTT-AT--------------------ACCAGGGAT-A-----TATTTCAAACCTGTTCTGATACATCTCTtctcatgcagtgactatttcaatgttttctaaatataacatgagaaaacatcatttatttttttcttctaattttccaagttttctctcccatcaccgccccaaacccacctcccacacctagccctagttgtagcatcgctgcttataccagggatatatttcaaacctgttctgatacatctct
gi|17 : acgcgtacccaggcatacgcacgtacgccaatgtcgaaaaaaatcgaatacataaaaactccaaatatgcataaaaactgaaggttgagagggtaacatgctgatttctttcgaatatatcagcagtattttacctattctcatgcagtgactatttcaatgttttctCAGGCGAGTGTCCAGGCATACGCAAGTGCGCC-AA-----GCGTACAA-TAG---TCAGCAAAGACTGAGA
gi|17 : cAAGACTGAGAGGGTTATCT-GCTAATTTCTTTCG----AATAT---------------------------CGAGAC-----------TCCTGTCG-TTCAGCGTGAGCGGCGAGACAA--TCTATGA-T----TT-TAAAATGATTTAAAATCGTTAT--TTT---TGTTTCTAAACATTAATAA-GT-AATAAATTCAG-T-------ATAAAA-GAGACAAAC--GAAATTCAAGATTGAGGCTGAAATATAGCTCCATGTGAA--CACGTCACTGATG-ATTTAT------C-TT--CTAGTTTCC--T-AACTTTTCT------TG-----------------------G--T-----G----------T---------A---------CA-GCC-------T-C--T--------C-T---------C--gggttatctgctaatttctttcgaatatcgagactcctgtcgttcagcgtgagcggcgagacaatctatgattttaaaatgatttaaaatcgttatttttgtttctaaacattaataagtaataaattcagtataaaagagacaaacgaaattcaagattgaggctgaaatatagctccatgtgaacacgtcactgatgatttatcttctagtttcctaacttttcttggtgtacagcctctctctccca
gi|18 : ccaggcgagtgtccaggcatacgcaagtgcgccaagcgtacaatagtcagcaAAAACGTCAAGAAA--CTCTAG---A--TA--------C-ATTAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCA----ATTAC-----AACAGTGATAATTTAC---ATGTAtccca
gi|18 : acaattagttcgcctgtaaatttcctcAAGTATAA---CATGAA-----GCATC--------ATTTGT------C-TT--CTAATTTCT--A-AAATGTTCT------TG-----------------------T--G-----G----------G---------G---------AG-ACC-------C-C--CAAAATCTCC-C---------T--C-----ATAC---A-CCTA-C-CT-C--C--AA--------TTGCAACATCGCTG--------CTT-AT--------------------ATCTAGTGT-A-----CAGCTCAAAACTGTTCAGGTTCGCCCCTtatctcccgcagtaattatttaaaccattttaagtataacatgaagcatcatttgtcttctaatttctaaaatgttcttgtggggagacccccaaaatctccctcatacacctacctccaattgcaacatcgctgcttatatctagtgtacagctcaaaactgttcaggttcgcccctgat
gi|19 : acaattagttcgcctgtaaatttcctcaaaacgtcaagaaactctagatacattaaaactgaaggctgagagggttacgtgctaatttcttccaattacaacagtgataatttacatgtatatctcccgcagtaattatttaaaccattttTCATGACGTGTCACGGTAAGCGGCGTATTAA--GCAGTGATT----TT--AACACGATTAAAAA-AATTAT--TCTTCACGTTTCCTAACCTTGCTAATAT-G-------TAA-TTTAATAGATAAAAAGTGACAAAA--GAAATGCTATATTTAG-CTGAAATATAG---TATGAGAT--CGCAAC--------ATTTAC------T-TT--CTAAATTTC--A-CAACTTTCT------TGATA--------------------G--A-----G----------G---------AC--------AA-ACC-------C-C--C--------gat
gi|2 : aatcgactttcacagccattatgagcacgcatgcattatagattcatattgacaactaaagttaatttattttattttgaatggcgaaaataTCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGC-AAAAGTGAAAACAT--AACAA--CTCCAA---A--TA-----a
gi|2 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgtCGTGGGCCGCGTGATAA--GCTATGCTT----TT-TAAAACGATTT-----------------------TTCTAACCTTTCTTATAT-G-------TAA-T-------ATAAAA-GCGACAAAT--AAA-TGCCAAATTAACGTTGAAATATAG---CACGAGAA--CGTAAC--------ATTTGC------C-TT--CTGATTTTC--A-AAATGTTCT------TG-----------------------A--T-----G----------G---------ATTCC-----AA-ACC-------C-C--C--------A-C---------C--G-----A--CGGGA-GTTG-C-C--C--TCAAC--------TCGTAGTACCGCTGCTACGCTACTT-AG--------------------ATCTGGCAT-A-----CAGTTCAAATTCGTTCAGGTACGaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgacgtgggccgcgtgataagctatgctttttaaaacgatttttctaacctttcttatatgtaatataaaagcgacaaataaatgccaaattaacgttgaaatatagcacgagaacgtaacatttgccttctgattttcaaaatgttcttgatggattccaaacccccaccgacgggagttgccctcaactcgtagtaccgctgctacgctacttagatctggcatacagttcaaattcgttcaggtacgac
gi|20 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgttcaggcgcgtatccaggcatacgcacgtacgccaatgcgtacaattcgtcagcaaaagtgaaaacataacaactccaaataaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgaCAGGCGCGTATCCTGGCATACATACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGACA--CTCAAA---A--TA--------C-AT-AAAACTGAAGATTCAGAGAGTTACGT-GCTAATGTCTTCCG----AATATACATAATAAGTGGAGGTTTAC---CTATac
gi|21 : aacagctatatttcacagatcgatatgtaagcgattacatacgagggcttgtcaataaattatattaggcatagtaatataaaaccaaaatatctatttcaagactatacattaaTAAGATATAA---CATGAGAA--AACATC--------ATTTAT------C-TT--CTAAGTTCC--A-AAATTTTCT------TG-----------------------G--G-----GAGGTCTCCGAG---------ACTCTT----AA-ACC-------C-C--C--------CTC---------C--C-----A--C---T-CCTA-T-CT-C--C--AC--------TTGCATCACC--TG--------CTT-AT--------------------ATTTGGCAA-A-----CAGTTCAAATTTGTTCAGGTACACTCCTttctcccgcagtaattatttca
gi|22 : gtaattatttcaattatttTGAGACA---TCGAGACTTTTGTCA-GTCAGC--------------------TATGACT----AT-TAAAACGGTTTAAAATCGTTAT--TTA---TGTTTCCTTACATTGCTAATGT-G-------CAT-T-------ATAAAA-GTGACAAAC--AAAACGCAAGATTGAGGCGGAAATAAAG---TATGAGAA--CACATC--------ATTTGT------C-TT--CTTATTTCC--T-AAATGTTCT------TG-----------------------A--GGGGGTG----------G---------A---------GA-A--------------------------------------------A--G---A--------------C--AC--------TTGCAGCATTGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAATTCAAATCCGTCCAGGTACGCCCCTggcagctggcaaatttgactttgtcccgcgatattctacaaccaaccatcttatatatttatacattattttgtcaagatattt
gi|23 : CGTGAATGGCGTGACAA--GCTATGATT----TT-TAAAATGAT-----AT----AT--TT------------AACCTTGCTAATAT-A-------TAG-T-------ATAAAA-ATGACGGGT---AAATGCCATATT
gi|24 : ccaaatatgtaataagatgggtattgcttcctggctccgctgttttaaaaaatcaaatgacaatcgactttcacagccatcatgagcattaatgcattatggattaatattgattactgaaagtttattttctttcaaacggcaaggcagtgccatgaACCAGGTGCGTACCCAGGCTTACGCACATACGCC-AAT----ACGTACAATTCG---TCAGC-AAAAGTGAAAGAAT--A
gi|24 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacAATATAG---CATGAGAA--TACATC--------ATTT-T------CATT--CTAATTT----------------------G-----------------------T--G-----G----------G---------A---------GA-CCC-------C-C--CGACAA---C-C---------T--T-----A--C---T-CACA-C-C--C--C--AC--------TTGCAGCGTCGCTG--------CTG-AT--------------------AACTGGTGT-A-----CAGTTCAAACCCGTCCAAGTACACCCtagcatgagaatacatcattttcattctaatttgtgggagaccccccgacaaccttactcacaccccacttgcagcgtcgctgctgataactggtgtacagttcaaacccgtccaagtacaccct
gi|25 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacaccaggtgcgtacccaggcttacgcacatacgccaatacgtacaattcgtcagcaaaagtgaaagTTGCTAATGT-G-------TAG-C-------ATAAA-----------------TGCCACATTAACGCTGAAATATAG---CACGAGAA--CGCAAC--------ATTTGC------C-TT--CTAATTTTC--A-AAATATTCT------TGATGCCGTCCAAACTCCCACGGACG--G-----GAGTT------G---------G---------AG-AAT-------C-C--C--------T-C---------C--T-----A--T---A-CTTG-C-C--C--TCAAC--------TCGAAGTGTCGTTA--------CTCGATTCGAA---------------GCCTGACGT-A-----CAGTTCAAATTCGTTCAGGTACACCCt
gi|26 : tgtgttgtttatatgcctAA---A--TA--------C-ATAAAAACTGAAGACTGAGAGGGTCGCGT-GCCATTTTTTTCCG----ATTAG-----ATCCGTGGAAAGTTAC---ATAT
gi|26 : AAACATAA---CATGAGAA--AAAATC--------ATTTGT------T-TTTTCTAATTTCTTAA-AAAAATTCT------TA-----------------------G--G-----G----------ACAGAACCCAA---------AA-ATC-------C-C--C--------CTC---------C--C-----A--C---A-CATAAC-C--C--C--AC--------TTGCAACATCACTG--------CTT-AT--------------------ATCTttcatccgtagtaattattttaattgtttttaaacataacatgagaaaaaatcatttgttttttctaatttcttaaaaaaattcttagggacagaacccaaaaatccccctcccacacataaccccacttgcaacatcactgcttatatct
gi|27 : aaatacataaaaactgaagactgagagggtcgcgtgccatttttttccgattagatccgtggaaagttacatatttcatccgtagtaattattttaattgtttttCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GTGTACAAATTGAAGTCAGCAAAAAGTTAAAACAG--AAAAA---------------A-----CG-C---------TGAAGGCTGAGAGGATAACAT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---TTA
gi|28 : ttccttggaagacaatcgCAATTCG---TCAGC--AAATTAAAAGCAT--AAAAG--GCTGAA---A--TA-----Tcttctcccgcagtaattatttttggta
gi|28 : AGGCTGAAATATTG---TACGAGAAAACGCGTG--------ATTTAT------C-GT--CTTATTTCA--C-AAATGTTCTAGA---TA-----------------------G--T-----G----------G---------A---------AG-CCC-------C-C--CGAAGA---C-C---------T--C-----A------A-CCTA-A-C--T--CG-AC--------TCGCAGCGCCCATG--------TTC-AT--------------------AACTGGCGC-A-----CAGTTCAAACCCATCCAGATACGtgtacgagaaaacgcgtgatttatcgtcttatttcacaaatgttctagatagtggaagccccccgaagacctcaacctaactcgactcgcagcgcccatgttcataactggcgcacagttcaaacccatccagatacgaca
gi|29 : caattcgtcagcaaattaaaagcataaaGCATCCAGGCATACGCACGAACGAC-AAT----ATGTACAATTCG---TCAGTAAAAAGTGAAAAC----AAAAA--CTCCAA---A--TAGATC-TA-C-ATGTAAACTGGCGGTTGACAGAGTTATGT-GCTTGATTCTTCCC----A---------GGCAGTGGTAATTaca
gi|3 : aaatagtccttagacaAATCAGGCGCGTTCTCGGGCATATGCACGTACGCC-AAT----GCGTACAAGTCG---TCTGCAAAATGTGAAAACAT--AAACG--CTCCAA---A--TA-----TG-C-ATAAAAACTCGAGGCTGAGACGGTTAGGT-GTTTATTTCTTCCG----AATAT-----ATCAGTTGTAATTTAC---CTGTAAGACA---TCGAGACTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTACGCTT----TT-TAAAACGATTTAAAATTGCTGT--TTT---TGTTTTCTTACATAACTGATGT-G-------CAT-T-------ATAAAA-GTGG-AAACCGAAAATGCAAGATTGAGGCTGCAGTATAA---CACGAGAA--CACATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATGTCCA------TG-----------------------G--G-----G----------G---------A---------AA-AGC-------C-C--C--------T-T---------C--C-----A--C---A-CCTA-T-C--C--C--AC--------TTGCAGCAACCCTG--------TTC-AT--------------------ATTTGGCGT-A-----CAGTTCAAACCAGTTCAGGTACGCCCCTatttcattaatttt
gi|30 : TCAGGCACATATCCAAGCATACGTACGTATGCC-AAT----GTGC-----------------AAAAGTGAAAACAT--AAAAG--TTCCAA---A--TA-----TA-CAATAAAAACTGAAGACTGAG
gi|31 : tagtacaattaaaaacaaaattattatatatatccagtacacATGCC-AGT----GGGTACAATTCG---TCAGCAAAAAGTGAAAACGT--AAAAAAACTCAAA---A--CA-----TG-C-ATAAAAACGGAAGGCTTGGAGGGTTACGT-GTTAATTTCTTCCG----AATAT-----ATCACCAGTAATTTAC---CTATtgaatgtcaggccttggtttactc
gi|32 : AGTCCGGTGCGTATCCAGAAACACGAACGTATGCC-AAT----GCGTACAATTCG---TCGGCAAAATGTGAAAACAT--ACAAA--CTCTAATTCA--CA-----TGTC-ATAttcttccgcagcaattatttt
gi|33 : ctgaaatgaaaaaaaaatataattatacctgtatgtaatttagctatAAATGCCATATTTACGCTGAAATATAG---CACGATAA--CGCAAC--------ATTTGC------T-TT--CTAATTTTC--A-AAATTTTCT------TG-----------------------A--T-----G----------G---------AGGCC-----AA-ACC-------C-C--C--------
gi|34 : CAGGCGCGTATCCGGGCATGCGCACGTACGCCAAATCCCGGCGCACAATTCG---TCAGCAAAAAGTGAAAAC
gi|35 : ctttacagcTCGCTA--------CAC-AG--------------------ATCTGGCGT-AGCGTACAGTTAAAATTTGCCCATTTGCGCCCCTt
gi|37 : cagcttgatTCGCTA--------CAC-AG--------------------ATCTGGCGT-A-----CAGTTAAAATTCGTCCAGTTGCGCCCgaatacta
gi|38 : ctcgctgcttgatAAATATGA---CATGAGAA--AACACC--------ATTTGT------C-TC--CTTATTTCT--A-AAGTTATCT------T
gi|4 : CAGGTGCGTATC-AGGCAAACGCACGCGCGCC-AAT----GTGTACAGTTCG---TCAGGAAAATGTGAAAACAT--AAAAA--CTCAAA---AAATA-----TG-C-ATAAAA-CTGAAGACAGAGATGGTTATGT-GCTCATTTCTTCCA----TATAT-----ATATGTGGTAATTTAC---CTTTACGACA---TCGAGACGCATGTCG-GTCATTGGGAGTGGCCTGATAG--GTTATGATT----TTTTAAAACGATTCAAAATCGTTAT--TTT---TGTTTCCTAACATTGCGTATGT-C-------CAG-T-------TTAAAA-GTGATAAAC--AAAATGCAAGATTGAGATTGAAATATAA---CACGAGAA--CACACC--------AGTTGT------C-TT--CTTAATTCC--A-AAATTGTCC------TG-----------------------G--T-----G----------G---------a
gi|4 : TC-AT--------------------ATTTGGCTT-A-----CAGAGCAAACCCGTCCAGGTACGCCCCTggtggggggatcatatttggcttacagagcaaacccgtccaggtacgcccctga
gi|5 : caggtgcgtatcaggcaaacgcacgcgcgccaatgtgtacagttcgtcaggaaaatgtgaaaacataaaaactcaaaaaatatgcataaaactgaagacagagatggttatgtgctcatttcttccatatatatatgtggtaatttacctttacgacatcgagacgcatgtcggtcattgggagtggcctgataggttatgattttttaaaacgattcaaaatcgttatttttgtttcctaacattgcgtatgtccagtttaaaagtgataaacaaaatgcaagattgagattgaaatataacacgagaacacaccagttgtcttcttaattccaaaattgtcctggtggggtggggggaTGTC---TCGACGTGAGCGGCGTGATAA--GCTGTGA--------------CGATTTAAAATTGTTGTAATTC---GGTTTCCGAACCTTGCTAATGTTA-------TAG-T-------ATAAAA-ATGGCAAAT--AAAATGTCACATTTACGCTCAAATATAG---CACGAAAA--TGTAAG--------ACTTGC------C-TT--TTAATTTTC--A-AAA-ATTGT---------------------------------------------------------------------------CC-------C-C--C--------T-C---------C--T-----T--C---A-CTTA-CAC--T--T--ACTGCTCGAGTTGAAGCTACGCTA--------CTC-TG--------------------AGATGACTT-A-----CAGTTCAAGTTCGTTCAAGTATGCga
gi|6 : atcaaatgtgatgcgaggggtattgccgcatgaatctgttgtttaggtttcaaatgacaatcgacattcgcagccttcatgagcatgaatgtattatataggtacacatgactggtgtaggtagtttatttttttcaaacggcgatacat---TCAGCAAAATGCGAAAACCT--AAAAA--CTCGAA---A--TA-----TG-C-ATAAAAACTGAAAGTTTAGAGGGTTATGT-GCTAATTTCTTCTG----AATAT-----ATCAATTGTAATTTTC---CTATAAGACA---TCGAGACTCTTGTCT-GTCAGCGTTAGTGGCATAACAAGTGCTATGATT----TT-TAAAACAATTTAAAATTGTTAT--TTT---TGTTTCCTAGCATTGCTAATGT-G-------CTG-T-------A-AAAA-GTGACAAAC--AAAATGCAAGATTGAGGCTGAAATATTG---CATGAGAA--CACTTC--------A-TTGT------C-TT--CTAATATCA--ATATATTTTCT------TG-----------------------GCAG-----A----------G---------A---------GATACT-------C-T--C--------C-CTGA------T--G-----A--C---ATCCTT-T-G--C--C--AC--------TTGCAGCATTGCTG--------TAT-AT--------------------ATTTGGCAT-A-----CAGTTTAAACCCGTTCAGGTATGCCC
gi|7 : ttaGCGCGTATCCAAACATACGCACGTACGCC-AAT----ACGTACAATTCG---TCAGCAAAAAGTTAAAACAT--AGAAA--CTTCAA---A--TAGCATCTA-C-ATAAAAACTAAAGGCTGAGAAGGTTA-----CTAATTTCTTCCA----AATA
gi|7 : ctttaaacataatAAATATAA---CATGAGAC--AAAATT--------GTTTGT------C-TT--CTAATTTCT--A-AAATTTTCT------TT-----------------------A--G-----A----------G---------A---------GA-CCC-------C-C--C--------C-C---------C--C--------------CCCC-C-C--C--C--CC--------TTattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|7 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttat---------AA-ATT-------C-C--C--------C-T---------C--CTCAGTA--C---A-CCTA-C-C--C--CC-AC--------TTGCAACATCGCTG--------CTT-AT--------------------ATCtaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagTCCAA---A--T-------G-C-ATAAAAACTGAAGGCTGTAATGGTTACGT-GATAATTTCTTCCG----AAGAT-----ATCAATTGTAATTTAA---CTaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : AGTATAA---GATGAGAA--AACATA--------ATTTGT------C-TT--CTAATTGTT--G-AAATGTTCT------TT-----------------------T--T---------------------------------------CCC-------C-C--C--------C-C---------C--C-----C--C---C-CCCC-C-C--C--C--A-------------AAAAGCCCT---------CCC-AC--------------------ACCAACCCTAA-----CAGTTTAAACCTGTTCAGATCCGCTCCTttttcttccgcagtaattatttcaattatttttagtataagatgagaaaacataatttgtcttctaattgttgaaatgttctttttcccccccccccccccccccccaaaaagccctcccacaccaaccctaacagtttaaacctgttcagatccgctcctcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
gi|9 : tccaaatgcataaaaactgaaggctgtaatggttacgtgataatttcttccgaagatatcaattgtaatttaactttttcttccgcagtaattatttcaattatttttG----AGCAT-----AT-AGT--TAGTTTATTTTCTTTCAAACG---GCGAGA-TAATGTCA--TGA-CTTAAGCGGCGCCATAA--GCAATGATT----AT-TCAAACGATATAAAAT--TTATAACTG---C-TTTCCTAACCTTACTAATAT-G-------TAT-T-------ATAACA-GTGACAAAC--AAAATGCCACATTAACGCTGACATATAG---CATAAGAA--CGCAAT--------AGTTGC------C-TT--CTAGTTTTC--A-AAAATTTCT----------------------------------------------------------------------------------------------------C---------C--T-----A--C---A-CTTA-C-CCTC--C--AC--------TCGTACCGTCGCTG--------CTC-ATGTTGAAGCTATGCTATGCAGATATGCCAT-C-----CAGTTCAAATTCATTCAGGAACGcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
blockSeqs : A CCCG AAG CA AA A TTC AA GCATCT T A G A A CTGG ACATA G TTT GTG C C GTG G GT . T A AA TTCAC T ATAAATT T TTAATAG A CG A G CTC AACG TTGAAAGT TTTTTT A TT TA T G TGATGCCGTCCAAACTCCCACGGACGGGAGTTGG T ACAAAAT A AC AAAATCTCCCTCATA GGG T A A CT TA CA TGCTCGAG CTACGCTA G GTTGAAGCTATGCTATGCAG A GCGTA
blockSeqs : . . . . . C . . GATCT . . G A G . . G . . C C GA G . . . G AA TT . . . . . . C C . AA TTGAAAGT . . . . . A TGGGGAGGTCTCCGAGACTCTT . . . . GACAACCTTA . . G . T TA CA . . . TCGAA . .
blockSeqs : . . . . . C . . T . . A . A . . G . . C A GT C . . . C . AC . . . . . . A G . AA ACTGATG . . . . . A CTCCCATCACCGCCCC . . . . GAAGACCTCA . . A . A . G . . . . . .
blockSeqs : . . . . . C . . T . . A . A . . G . . C T AG G . . . A . TT . . . . . . T T . AA . . . . . . G TAGGGACAGAACCCAA . . . . CTCCTCAGTA . . . . T . C . . . . . .
blockSeqs : . . . . . C . . T . . T . A . . A . . C C AG G . . . C . AT . . . . . . C A . TG . . . . . . T TGGAGGAGACCCCCA . . . . CCTGATGA . . . . T . . . . . . . .
blockSeqs : . . . . . T . . T . . A . A . . G . . . A GG T . . . T . TT . . . . . . A G . AA . . . . . . T TGAGGGGGTGGA . . . . CCCTCCT . . . . . . . . . . . . .
blockSeqs : . . . . . C . . C . . G . A . . G . . . T TG A . . . C . TT . . . . . . C T . AA . . . . . . T TGATAGAGGAC . . . . CCCTCCT . . . . . . . . . . . . .
blockSeqs : . . . . . A . . T . . A . T . . G . A A G . . . T . CG . . . . . . C C . CA . . . . . . G TGATGGATTCC . . . . CCTTCCA . . . . . . . . . . . . .
blockSeqs : . . . . . G . . T . . A . T . . G . . . . . . T . TT . . . . . . A G . CG . . . . . . T TGATGGAGGCC . . . . CTCCCA . . . . . . . . . . . . .
blockSeqs : . . . . . C . . T . . A . A . . G . . . . . . GC . . . . . . C T . CG . . . . . . G ACCCCCACCC . . . . CTCCCA . . . . . . . . . . . . .
blockSeqs : . . . . . C . . T . . A . C . . T . . . . . . . . . . . . . A G . AA . . . . . . T ACCCCCACCC . . . . CTCCCA . . . . . . . . . . . . .
blockSeqs : . . . . . C . . T . . A . A . . A . . . . . . . . . . . . . C C . CA . . . . . . G AGATAGTGGA . . . . CTCCA . . . . . . . . . . . . .
blockSeqs : . . . . . A . . T . . A . A . . G . . . . . . . A G . TA . . . . . . A TGGCAGAGA . . . . TCCCA . . . . . . . . . . . . .
blockSeqs : . . . . . T . . T . . A . A . . T . C C . CG . . . . . . A CGGGGGA . . . . ACCGA . . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . A . . . . T . . AA . . . . . . G TGGCGGA . . . . TCCTA . . . . . . . . . . . . .
blockSeqs : . . . . . G . . . . . . . . . . . . . CA . . . . . . G TGGTGTA . . . . TTCCA . . . . . . . . . . . . .
blockSeqs : . . . . . C . . . . . . . . . . . . CG . . . . . . T TGTGGGG . . . . TCCTT . . . . . . . . . . . . .
blockSeqs : . . . . . C . . . . . . . . AA . . . . . . T TGGGGGA . . . . CCCCC . . . . . . . . . . . . .
blockSeqs : . . . . . . . CA . . . . . . T TTAGAGA . . . . CCCC . . . . . . . . . . . . .
blockSeqs : . . . . TG . . . . . . A GTGGGA . . . . CCTA . . . . . . . . . . . . .
blockSeqs : . CA . . . . . . T TTTT . . . . A . . . . . . . . . . . . .
blockSeqs : . AA . . . . . . T . . . . . . . .
blockSeqs : . AA . . . . . . G . . . . . . .
blockSeqs : . CG . . . . . . T . . . .
blockSeqs : . G . . . . . . . . . . .
blockSeqCons : **** CTCCCA************************** **
originalCons : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------G--G-----G----------G---------A---------AA-ACC-------C-C--C--------C-C---------C--C-----A--C---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
finalCons : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------G--G-----G----------G---------A---------AA-ACC-------C-C--CCTCCCA--------------------------C---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): TCTTAGACCCTGGTCATAATGATTAATAGCGTTCTTATACTTTAACGGTACTTTATTAGAAATATTTA
Unaligned ( gi|39 ): TACATAATGAGTCAAAAAAATTTCTTTGCTTATATAA
Alignments
lowQualScore : 111111 11111 11111111 7777777777777777777777777777777777777777777777777777777777777777777 11111 11 11111111111111111111
lowQualScore : 2 4444 333 0 22 22 1 333 22 111111 2 2 1 4 5 4444 55555 1 444 888 1 1 999 1 44 0 6666 3 9 88 22222 0 2 9999999 2 9999999 2 33 1 1 0 222 5555 66666666 444444 1 22 22 1 1 9999999999999999999999999999999999999999999999999999999999999999999 55 55555 88888 5555555 11111 44444 7 1 00 55 88 66666666 66666666 1 77777777777777777777 1 44444
lowQualScore : . .... ... . .. .. . ... .. ...... . . . . . .... ..... . ... ... . . ... . .. . .... . . .. ..... . . ....... . ....... . .. . . . ... .... ........ ...... . .. .. . . ................................................................... .. ..... ..... ....... ..... ..... . . .. .. .. ........ ........ . .................... . .....
lowQualScore : 1 5555 333 4 88 99 1 333 66 666666 1 1 2 4 6 5555 66666 5 111 888 4 9 555 6 22 8 5555 1 1 55 22222 2 9 3333333 9 3333333 9 99 0 0 7 777 6666 22222222 444444 5 11 11 5 5 7777777777777777777777777777777777777777777777777777777777777777777 88 66666 77777 7777777 77777 44444 3 8 55 00 66 99999999 33333333 7 77777777777777777777 8 55555
consensus : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------GN-----G--------G---------A---------AAACCCC--C-----C-----TC-------CC-----AC---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
Reference ( family-2564 ) : AATCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---CTATAAGACA---TCGAGACTCCTGTCG-GTCAGCGTGAGCGGCGTGACAA--GCTATGATT----TT-TAAAACGATTTAAAATCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CAG-T-------ATAAAA-GTGACAAAC--AAAATGCNANATTGAGGCTGAAATATAG---CATGAGAA--CGCATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATNTTCT------TG-----------------------GG-----G--------G---------A---------AAACCCC--C-----C-----TC-------CC-----AC---A-CCTA-C-C--C--C--AC--------TTGCAGCATCGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAGTTCAAACCCGTTCAGGTACGCCCCT
gi|1 : ATCAGGCGCGTATC-GGGCATACGCACGGACGCC-AAT----GCGTACAATTCG---TCCGCAAAATGTGAAAACAT--AAAAC--CTCTAA---A--CA-----TG-C-ATAAAAACTGAAGGCTGAGAGATTTATGT-GCCCATTTCTTCCA----AATAT-----ATAAGTTGTAATTTAC---CTGTAAGACA---TCGAGATTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTG-GGTCAAAGTT-TAGAACTATTTAAAGTCGTTAT--TTT---CGTTTCCTAACATTGCTAATGT-G-------CCG-T-------GT----------------AAAATGCAAGATTGAGGCTGAAATATAA---CATGAGAT--TACAGC--------ATTTGT------C-TT--CTAATTTCC--A-AAATGTTCT------TG-----------------------GT-----G--------G---------AG--------AGACCCC--CA----C-----TCACTGGTTCT-----AC---A-CCTA-C-CCAC--T--AC--------TTGCAGCCTCGCTG--------CTC-AT--------------------ATTTTACGT-A-----CAGTTCAAGCCC
gi|10 : aaaaagtatgtttacacacatatagatgattaacgatcataaacagagaagcatatcggtaacttcaaaccgtaagtccttgataataaagaaagtaatcatataactatacagatatttATTTCTCCCGCTGGAATG------ATTTGTGGTAATTTAC---CTATctgattatacactct
gi|10 : ctAAAT-TAA---CATGAGAA--AACACC--------ATTTGT------C-TT--CTAATTTCT--A-AAATGTTCT------TG-----------------------GA-----G--------G---------AGACCCCCA-AAACCCC--C-----C-----TC-------CC-----AT---A-CCCA-C-CT-C--C--GC--------TGGCAGCATCGCTA--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAACATGTTCAAATACGGCCCTttctcccgcagttattatttcaaatattttttaaattaacatgagaaaacaccatttgtcttctaatttctaaaatgttcttggaggagacccccaaaacccccctcccatacccacctccgctggcagcatcgctacttatatctggcgtacagttcaaacatgttcaaatacggccctgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : ctatttctcccgctggaatgatttgtggtaatttacctatttctcccgcagttattatttcaaatattttttCAGGCGCATATCCAGGCATACGCGCGTGCGCA-AAT----GCGTACAATTCG---TCATCTAAATGGGGAAACAT-----AA--CGCAAA---G--TA-----TG-C-AT-AGAACTGAAGGCTGAAATGGTAATGT-GCTAATTTCTgaattgtcatatgtaacacgttcctatttagcaatcatctcaaaaatcatcttgtatcgttaacaaacaaactagttacgtctaaaatatagaataaatgtcttacatttggtgatctgctgaggatgtataaattaacttttgcatcgtt
gi|11 : gtagatcatctctgatagctgcatataaacattgaCGTTAGCGGCGTGACAA--TCTAAGACC----TT-TAAAACGATTTCAGATAGTTAT--TTT---TGTTCTCTAACATTGCTAATTT-G-------AAG-T-------ATAAAA-GTGACAAAC--AAAATGCAAGATGGAGGCTGcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|11 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcct-----G--------A---------A---------GAGCCCCA-C-----C-----CT-------CC-----AC---A-CCTA-C-CA-C--C--AC--------TTGCAGCATCGCTA--------CTC-AT--------------------ATTTGTCGT-A-----CAGTTCAAACCCGTTCCGTTACGCCCCTtgaagagccccaccctccacacctaccaccacttgcagcatcgctactcatatttgtcgtacagttcaaacccgttccgttacgcccctgat
gi|12 : gtagatcatctctgatagctgcatataaacattgacaggcgcatatccaggcatacgcgcgtgcgcaaatgcgtacaattcgtcatctaaatggggaaacataacgcaaagtatgcatagaactgaaggctgaaatggtaatgtgctaatttctcattagcctcgttagcggcgtgacaatctaagacctttaaaacgatttcagatagttatttttgttctctaacattgctaatttgaagtataaaagtgacaaacaaaatgcaagatggaggctgtCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATgat
gi|12 : gtttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAATATTCT---------------------------------------------------------ACCCCCACCCAAACCTCTCC-----C-----TC-------CT-----CC-----CCTC-C-C--CTAC--AC--------CTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctga
gi|13 : gtttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaCAGGCGCGTATCCAGGCGTATGCACGTACGCT-AAT----GCTTACAATTCC---TTAGCAAAAAATTAAAACA----GAAA--CTCCAA---A--TA-----TG-C-AAGAAAAATGAAGGCTGAGAAGGTTACATAGCT-ATTTCTTACG----AATAT-----GTCAATGGTAATTCAC---TTATga
gi|13 : tttaatgtagaatcgTGAATCTTAAACATAA---CATGAGAA--AACATCTTGAAAGTGTTTTT------C-TT--CTAATTTCC--C-TAATATTCT---------------------------------------------------------ACCCCCACCCAAACCTCTCC-----C-----TC-------CT-----CC-----CCTC-C-C--CTAC--AC--------CTGCAACATCGCTT--------CTT-AT--------------------ATCTGGCGT-A-----CAGTTCAAATCTGTTCAGTTACGCCCCTttctcccgcagtaattatttcaatgaatcttaaacataacatgagaaaacatcttgaaagtgtttttcttctaatttccctaatattctacccccacccaaacctctccctcctcccctcccctacacctgcaacatcgcttcttatatctggcgtacagttcaaatctgttcagttacgcccctg
gi|14 : tttaatgtagaatcgcaggcgcgtatccaggcgtatgcacgtacgctaatgcttacaattccttagcaaaaaattaaaacagaaactccaaatatgcaagaaaaatgaaggctgagaaggttacatagctatttcttacgaatatgtcaatggtaattcacttatttctcccgcagtaattatttcaaTGAGACAGTGTCATGACTTCTGCCG-ATCTGTGCGGGTGGCACAATGA--GCTATGATT----TT-AAAAACAATTAAAAATGGTTAT--TTA---CATTTCCTAACATTGCTTATAT-G-------TAGTT-------ATAAAA-GTGAC---C--AAAAGGCCACGTTAATGCTGAAATATAG---CATGAGAA--TGCATC--------ATTTCA------T-TT--CTAATTTTC--A-AAATGTTCA------CG-----------------------GG-----G--------G---------A---------TGACCTC--g
gi|15 : tggctttgttgtttagggttaaatgacaatcaactctcgcagcatcatgagcatggctaggcctatattttggagtcatattggatattgtattttatttgtttcaaaactttcaaacggCAGGCGCGTATCGAAGCATACGCACGTACGCC-AGT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGAAA--TTCCAA---A--TA--------C-ATAAAAACTTAAGGCTGAGAGGGTTACGT-GCT---------------AATAT-----ATCAGTGGTAA-TTAC---CTATaaacct
gi|15 : gaatgaAAAGATAA---CATGAGAA--AACATC--------ACTTGT------C-TT--AAAATTTCT--A-AACTTTTCT------TG-----------------------GC-----G--------G---------ACAACCACA-AAATCCC--C-----C-----TT-------CC-----AC---A-CCAAAC-C--C--C--AC--------TTGCAGCATCGCTG--------CTG-AT--------------------ATCCGGCGT-A-----CAGTTAAAACCTGTTCAGATACGCCCCTttctcacgcagtaattgttttatttatttttaaagataacatgagaaaacatcacttgtcttaaaatttctaaacttttcttggcggacaaccacaaaatcccccttccacaccaaaccccacttgcagcatcgctgctgatatccggcgtacagttaaaacctgttcagatacgcccctgaatg
gi|16 : gaatgacaggcgcgtatcgaagcatacgcacgtacgccagtgcgtacaattcgtcagcaaaaagtgaaaacatagaaattccaaatacataaaaacttaaggctgagagggttacgtgctaatatatcagtggtaattacctatttctcacgcagtaattgttttatttatttttCGCGTACCCAGGCATACGCACGTACGCC-AAT----G--------------TCGAAAAAAATCGAATACAT--AAAAA--CTCCAA---A--TA-----TG-C-ATAAAAACTGAAGGTTGAGAGGGTAACAT-GCTGATTTCTTTCG----AATAT-----ATCAGCAGTATTTTAC---CTATgaatg
gi|16 : aAAATATAA---CATGAGAA--AACATC--------ATTTATTTTTTTC-TT--CTAATTTTC--C-AAGTTTTCTCTCCCATC-----------------------AC-----C--------G---------CCCC------AAACCCA--C-----C-----TC-------CC-----AC---A-CCTAGC-C--C--T--AG--------TTGTAGCATCGCTG--------CTT-AT--------------------ACCAGGGAT-A-----TATTTCAAACCTGTTCTGATACATCTCTtctcatgcagtgactatttcaatgttttctaaatataacatgagaaaacatcatttatttttttcttctaattttccaagttttctctcccatcaccgccccaaacccacctcccacacctagccctagttgtagcatcgctgcttataccagggatatatttcaaacctgttctgatacatctct
gi|17 : acgcgtacccaggcatacgcacgtacgccaatgtcgaaaaaaatcgaatacataaaaactccaaatatgcataaaaactgaaggttgagagggtaacatgctgatttctttcgaatatatcagcagtattttacctattctcatgcagtgactatttcaatgttttctCAGGCGAGTGTCCAGGCATACGCAAGTGCGCC-AA-----GCGTACAA-TAG---TCAGCAAAGACTGAGA
gi|17 : cAAGACTGAGAGGGTTATCT-GCTAATTTCTTTCG----AATAT---------------------------CGAGAC-----------TCCTGTCG-TTCAGCGTGAGCGGCGAGACAA--TCTATGA-T----TT-TAAAATGATTTAAAATCGTTAT--TTT---TGTTTCTAAACATTAATAA-GT-AATAAATTCAG-T-------ATAAAA-GAGACAAAC--GAAATTCAAGATTGAGGCTGAAATATAGCTCCATGTGAA--CACGTCACTGATG-ATTTAT------C-TT--CTAGTTTCC--T-AACTTTTCT------TG-----------------------GT-----G--------T---------A---------CAGCCTC--T-----C-----TC-------TC-----CC---A-gggttatctgctaatttctttcgaatatcgagactcctgtcgttcagcgtgagcggcgagacaatctatgattttaaaatgatttaaaatcgttatttttgtttctaaacattaataagtaataaattcagtataaaagagacaaacgaaattcaagattgaggctgaaatatagctccatgtgaacacgtcactgatgatttatcttctagtttcctaacttttcttggtgtacagcctctctctccca
gi|18 : ccaggcgagtgtccaggcatacgcaagtgcgccaagcgtacaatagtcagcaAAAACGTCAAGAAA--CTCTAG---A--TA--------C-ATTAAAACTGAAGGCTGAGAGGGTTACGT-GCTAATTTCTTCCA----ATTAC-----AACAGTGATAATTTAC---ATGTA
gi|18 : acaattagttcgcctgtaaatttcctcAAGTATAA---CATGAA-----GCATC--------ATTTGT------C-TT--CTAATTTCT--A-AAATGTTCT------TG-----------------------TG-----G--------G---------G---------AGACCCC--CAAAATC-----TC-------CCTCAT-AC---A-CCTA-C-CT-C--C--AA--------TTGCAACATCGCTG--------CTT-AT--------------------ATCTAGTGT-A-----CAGCTCAAAACTGTTCAGGTTCGCCCCTtatctcccgcagtaattatttaaaccattttaagtataacatgaagcatcatttgtcttctaatttctaaaatgttcttgtggggagacccccaaaatctccctcatacacctacctccaattgcaacatcgctgcttatatctagtgtacagctcaaaactgttcaggttcgcccctgat
gi|19 : acaattagttcgcctgtaaatttcctcaaaacgtcaagaaactctagatacattaaaactgaaggctgagagggttacgtgctaatttcttccaattacaacagtgataatttacatgtatatctcccgcagtaattatttaaaccattttTCATGACGTGTCACGGTAAGCGGCGTATTAA--GCAGTGATT----TT--AACACGATTAAAAA-AATTAT--TCTTCACGTTTCCTAACCTTGCTAATAT-G-------TAA-TTTAATAGATAAAAAGTGACAAAA--GAAATGCTATATTTAG-CTGAAATATAG---TATGAGAT--CGCAAC--------ATTTAC------T-TT--CTAAATTTC--A-CAACTTTCT------TGATA--------------------GA-----G--------G---------AC--------AAACCCC--C-----gat
gi|2 : aatcgactttcacagccattatgagcacgcatgcattatagattcatattgacaactaaagttaatttattttattttgaatggcgaaaataTCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GCGTACAATTCG---TCAGC-AAAAGTGAAAACAT--AACAA--CTCCAA---A--TA-----a
gi|2 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgtCGTGGGCCGCGTGATAA--GCTATGCTT----TT-TAAAACGATTT-----------------------TTCTAACCTTTCTTATAT-G-------TAA-T-------ATAAAA-GCGACAAAT--AAA-TGCCAAATTAACGTTGAAATATAG---CACGAGAA--CGTAAC--------ATTTGC------C-TT--CTGATTTTC--A-AAATGTTCT------TG-----------------------AT-----G--------G---------ATTCC-----AAACCCC--C-----A------C-------CG-----ACGGGA-GTTG-C-C--C--TCAAC--------TCGTAGTACCGCTGCTACGCTACTT-AG--------------------ATCTGGCAT-A-----CAGTTCAAATTCGTTCAGGTACGaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgacgtgggccgcgtgataagctatgctttttaaaacgatttttctaacctttcttatatgtaatataaaagcgacaaataaatgccaaattaacgttgaaatatagcacgagaacgtaacatttgccttctgattttcaaaatgttcttgatggattccaaacccccaccgacgggagttgccctcaactcgtagtaccgctgctacgctacttagatctggcatacagttcaaattcgttcaggtacgac
gi|20 : atcaatgtattgaattggagttttgttgactcgagctcgtctcagtgttcaggcgcgtatccaggcatacgcacgtacgccaatgcgtacaattcgtcagcaaaagtgaaaacataacaactccaaataaatattaacaggagtattgtcgcctggctctgatgtttgagtttcaaatgataattgactttcacacacatcgtgagcaggaatgttttatgtattcatatgacagtgccatgaCAGGCGCGTATCCTGGCATACATACGTACGCC-AAT----GCGTACAATTCG---TCAGCAAAAAGTGAAAACAT--AGACA--CTCAAA---A--TA--------C-AT-AAAACTGAAGATTCAGAGAGTTACGT-GCTAATGTCTTCCG----AATATACATAATAAGTGGAGGTTTAC---CTATac
gi|21 : aacagctatatttcacagatcgatatgtaagcgattacatacgagggcttgtcaataaattatattaggcatagtaatataaaaccaaaatatctatttcaagactatacattaaTAAGATATAA---CATGAGAA--AACATC--------ATTTAT------C-TT--CTAAGTTCC--A-AAATTTTCT------TG-----------------------GG-----GAGGTCTCCG---------AGACTCTT--AAACCCC--C-----C-----TC-------CC-----AC---T-CCTATC-T--C--C--AC--------TTGCATCAC--CTG--------CTT-AT--------------------ATTTGGCAA-A-----CAGTTCAAATTTGTTCAGGTACACTCCTttctcccgcagtaattatttca
gi|22 : gtaattatttcaattatttTGAGACA---TCGAGACTTTTGTCA-GTCAGC--------------------TATGACT----AT-TAAAACGGTTTAAAATCGTTAT--TTA---TGTTTCCTTACATTGCTAATGT-G-------CAT-T-------ATAAAA-GTGACAAAC--AAAACGCAAGATTGAGGCGGAAATAAAG---TATGAGAA--CACATC--------ATTTGT------C-TT--CTTATTTCC--T-AAATGTTCT------TG-----------------------AGGGGGTG--------G---------A---------GAA----------------------------------AG---A--------------C--AC--------TTGCAGCATTGCTG--------CTC-AT--------------------ATCTGGCGT-A-----CAATTCAAATCCGTCCAGGTACGCCCCTggcagctggcaaatttgactttgtcccgcgatattctacaaccaaccatcttatatatttatacattattttgtcaagatattt
gi|23 : CGTGAATGGCGTGACAA--GCTATGATT----TT-TAAAATGAT-----AT----AT--TT------------AACCTTGCTAATAT-A-------TAG-T-------ATAAAA-ATGACGGGT---AAATGCCATATT
gi|24 : ccaaatatgtaataagatgggtattgcttcctggctccgctgttttaaaaaatcaaatgacaatcgactttcacagccatcatgagcattaatgcattatggattaatattgattactgaaagtttattttctttcaaacggcaaggcagtgccatgaACCAGGTGCGTACCCAGGCTTACGCACATACGCC-AAT----ACGTACAATTCG---TCAGC-AAAAGTGAAAGAAT--A
gi|24 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacAATATAG---CATGAGAA--TACATC--------ATTT-T------CATT--CTAATTT----------------------------------------------GT-----G--------G---------G---------AGACCCC--C-----CGACAACC-------TT-----AC---T-CACA-C-C--C--C--AC--------TTGCAGCGTCGCTG--------CTG-AT--------------------AACTGGTGT-A-----CAGTTCAAACCCGTCCAAGTACACCCtagcatgagaatacatcattttcattctaatttgtgggagaccccccgacaaccttactcacaccccacttgcagcgtcgctgctgataactggtgtacagttcaaacccgtccaagtacaccct
gi|25 : acattaagcacacaacttaaaggttatcaaaatatatactgaataaaacaccaggtgcgtacccaggcttacgcacatacgccaatacgtacaattcgtcagcaaaagtgaaagTTGCTAATGT-G-------TAG-C-------ATAAA-----------------TGCCACATTAACGCTGAAATATAG---CACGAGAA--CGCAAC--------ATTTGC------C-TT--CTAATTTTC--A-AAATATTCT------TGATGCCGTCCAAACTCCCACGGACGG-----GAGTTG---G---------A---------GAATC----C-----C-----TC-------CT-----AT---A-CTTG-C-C--C--TCAAC--------TCGAAGTGTCGTTA--------CTCGATTCGAA---------------GCCTGACGT-A-----CAGTTCAAATTCGTTCAGGTACACCCt
gi|26 : tgtgttgtttatatgcctAA---A--TA--------C-ATAAAAACTGAAGACTGAGAGGGTCGCGT-GCCATTTTTTTCCG----ATTAG-----ATCCGTGGAAAGTTAC---ATAT
gi|26 : AAACATAA---CATGAGAA--AAAATC--------ATTTGT------T-TTTTCTAATTTCTTAA-AAAAATTCT------TA-----------------------GG-----G--------ACAGAACCCAA---------AAATCCC--C-----C-----TC-------CC-----AC---A-CATAAC-C--C--C--AC--------TTGCAACATCACTG--------CTT-AT--------------------ATCTttcatccgtagtaattattttaattgtttttaaacataacatgagaaaaaatcatttgttttttctaatttcttaaaaaaattcttagggacagaacccaaaaatccccctcccacacataaccccacttgcaacatcactgcttatatct
gi|27 : aaatacataaaaactgaagactgagagggtcgcgtgccatttttttccgattagatccgtggaaagttacatatttcatccgtagtaattattttaattgtttttCAGGCGCGTATCCAGGCATACGCACGTACGCC-AAT----GTGTACAAATTGAAGTCAGCAAAAAGTTAAAACAG--AAAAA---------------A-----CG-C---------TGAAGGCTGAGAGGATAACAT-GCTAATTTCTTCCG----AATAT-----ATCAGTGGTAATTTAC---TTA
gi|28 : ttccttggaagacaatcgCAATTCG---TCAGC--AAATTAAAAGCAT--AAAAG--GCTGAA---A--TA-----Tcttctcccgcagtaattatttttggta
gi|28 : AGGCTGAAATATTG---TACGAGAAAACGCGTG--------ATTTAT------C-GT--CTTATTTCA--C-AAATGTTCTAGA---TA-----------------------GT-----G--------G---------A---------AG-CCCC--C-----CGAAGACC-------TC-----A----A-CCTA-A-C--T--CG-AC--------TCGCAGCGCCCATG--------TTC-AT--------------------AACTGGCGC-A-----CAGTTCAAACCCATCCAGATACGtgtacgagaaaacgcgtgatttatcgtcttatttcacaaatgttctagatagtggaagccccccgaagacctcaacctaactcgactcgcagcgcccatgttcataactggcgcacagttcaaacccatccagatacgaca
gi|29 : caattcgtcagcaaattaaaagcataaaGCATCCAGGCATACGCACGAACGAC-AAT----ATGTACAATTCG---TCAGTAAAAAGTGAAAAC----AAAAA--CTCCAA---A--TAGATC-TA-C-ATGTAAACTGGCGGTTGACAGAGTTATGT-GCTTGATTCTTCCC----A---------GGCAGTGGTAATTaca
gi|3 : aaatagtccttagacaAATCAGGCGCGTTCTCGGGCATATGCACGTACGCC-AAT----GCGTACAAGTCG---TCTGCAAAATGTGAAAACAT--AAACG--CTCCAA---A--TA-----TG-C-ATAAAAACTCGAGGCTGAGACGGTTAGGT-GTTTATTTCTTCCG----AATAT-----ATCAGTTGTAATTTAC---CTGTAAGACA---TCGAGACTCCTGTCA-GTCAGTTTGAGCGGCGTGACAA--GCTACGCTT----TT-TAAAACGATTTAAAATTGCTGT--TTT---TGTTTTCTTACATAACTGATGT-G-------CAT-T-------ATAAAA-GTGG-AAACCGAAAATGCAAGATTGAGGCTGCAGTATAA---CACGAGAA--CACATC--------ATTTGT------C-TT--CTAATTTCC--A-AAATGTCCA------TG-----------------------GG-----G--------G---------A---------AAA-GCC--C-----C-----TT-------CC-----AC---A-CCTA-T-C--C--C--AC--------TTGCAGCAACCCTG--------TTC-AT--------------------ATTTGGCGT-A-----CAGTTCAAACCAGTTCAGGTACGCCCCTatttcattaatttt
gi|30 : TCAGGCACATATCCAAGCATACGTACGTATGCC-AAT----GTGC-----------------AAAAGTGAAAACAT--AAAAG--TTCCAA---A--TA-----TA-CAATAAAAACTGAAGACTGAG
gi|31 : tagtacaattaaaaacaaaattattatatatatccagtacacATGCC-AGT----GGGTACAATTCG---TCAGCAAAAAGTGAAAACGT--AAAAAAACTCAAA---A--CA-----TG-C-ATAAAAACGGAAGGCTTGGAGGGTTACGT-GTTAATTTCTTCCG----AATAT-----ATCACCAGTAATTTAC---CTATtgaatgtcaggccttggtttactc
gi|32 : AGTCCGGTGCGTATCCAGAAACACGAACGTATGCC-AAT----GCGTACAATTCG---TCGGCAAAATGTGAAAACAT--ACAAA--CTCTAATTCA--CA-----TGTC-ATAttcttccgcagcaattatttt
gi|33 : ctgaaatgaaaaaaaaatataattatacctgtatgtaatttagctatAAATGCCATATTTACGCTGAAATATAG---CACGATAA--CGCAAC--------ATTTGC------T-TT--CTAATTTTC--A-AAATTTTCT------TG-----------------------AT-----G--------G---------AGGCC-----AAACCCC--C-----
gi|34 : CAGGCGCGTATCCGGGCATGCGCACGTACGCCAAATCCCGGCGCACAATTCG---TCAGCAAAAAGTGAAAAC
gi|35 : ctttacagcTCGCTA--------CAC-AG--------------------ATCTGGCGT-AGCGTACAGTTAAAATTTGCCCATTTGCGCCCCTt
gi|37 : cagcttgatTCGCTA--------CAC-AG--------------------ATCTGGCGT-A-----CAGTTAAAATTCGTCCAGTTGCGCCCgaatacta
gi|38 : ctcgctgcttgatAAATATGA---CATGAGAA--AACACC--------ATTTGT------C-TC--CTTATTTCT--A-AAGTTATCT------T
gi|4 : CAGGTGCGTATC-AGGCAAACGCACGCGCGCC-AAT----GTGTACAGTTCG---TCAGGAAAATGTGAAAACAT--AAAAA--CTCAAA---AAATA-----TG-C-ATAAAA-CTGAAGACAGAGATGGTTATGT-GCTCATTTCTTCCA----TATAT-----ATATGTGGTAATTTAC---CTTTACGACA---TCGAGACGCATGTCG-GTCATTGGGAGTGGCCTGATAG--GTTATGATT----TTTTAAAACGATTCAAAATCGTTAT--TTT---TGTTTCCTAACATTGCGTATGT-C-------CAG-T-------TTAAAA-GTGATAAAC--AAAATGCAAGATTGAGATTGAAATATAA---CACGAGAA--CACACC--------AGTTGT------C-TT--CTTAATTCC--A-AAATTGTCC------TG-----------------------GT-----G--------G---------a
gi|4 : TC-AT--------------------ATTTGGCTT-A-----CAGAGCAAACCCGTCCAGGTACGCCCCTggtggggggatcatatttggcttacagagcaaacccgtccaggtacgcccctga
gi|5 : caggtgcgtatcaggcaaacgcacgcgcgccaatgtgtacagttcgtcaggaaaatgtgaaaacataaaaactcaaaaaatatgcataaaactgaagacagagatggttatgtgctcatttcttccatatatatatgtggtaatttacctttacgacatcgagacgcatgtcggtcattgggagtggcctgataggttatgattttttaaaacgattcaaaatcgttatttttgtttcctaacattgcgtatgtccagtttaaaagtgataaacaaaatgcaagattgagattgaaatataacacgagaacacaccagttgtcttcttaattccaaaattgtcctggtggggtggggggaTGTC---TCGACGTGAGCGGCGTGATAA--GCTGTGA--------------CGATTTAAAATTGTTGTAATTC---GGTTTCCGAACCTTGCTAATGTTA-------TAG-T-------ATAAAA-ATGGCAAAT--AAAATGTCACATTTACGCTCAAATATAG---CACGAAAA--TGTAAG--------ACTTGC------C-TT--TTAATTTTC--A-AAA-ATTGT-----------------------------------------------------------------------CCC--C-----C-----TC-------CT-----TC---A-CTTA-CAC--T--T--ACTGCTCGAGTTGAAGCTACGCTA--------CTC-TG--------------------AGATGACTT-A-----CAGTTCAAGTTCGTTCAAGTATGCga
gi|6 : atcaaatgtgatgcgaggggtattgccgcatgaatctgttgtttaggtttcaaatgacaatcgacattcgcagccttcatgagcatgaatgtattatataggtacacatgactggtgtaggtagtttatttttttcaaacggcgatacat---TCAGCAAAATGCGAAAACCT--AAAAA--CTCGAA---A--TA-----TG-C-ATAAAAACTGAAAGTTTAGAGGGTTATGT-GCTAATTTCTTCTG----AATAT-----ATCAATTGTAATTTTC---CTATAAGACA---TCGAGACTCTTGTCT-GTCAGCGTTAGTGGCATAACAAGTGCTATGATT----TT-TAAAACAATTTAAAATTGTTAT--TTT---TGTTTCCTAGCATTGCTAATGT-G-------CTG-T-------A-AAAA-GTGACAAAC--AAAATGCAAGATTGAGGCTGAAATATTG---CATGAGAA--CACTTC--------A-TTGT------C-TT--CTAATATCA--ATATATTTTCT------TG-----------------------GC-----A--------G---------A---------GAGATAC--T-----C-----TC-------CCTGATGAC---ATCCTT-T-G--C--C--AC--------TTGCAGCATTGCTG--------TAT-AT--------------------ATTTGGCAT-A-----CAGTTTAAACCCGTTCAGGTATGCCC
gi|7 : ttaGCGCGTATCCAAACATACGCACGTACGCC-AAT----ACGTACAATTCG---TCAGCAAAAAGTTAAAACAT--AGAAA--CTTCAA---A--TAGCATCTA-C-ATAAAAACTAAAGGCTGAGAAGGTTA-----CTAATTTCTTCCA----AATA
gi|7 : ctttaaacataatAAATATAA---CATGAGAC--AAAATT--------GTTTGT------C-TT--CTAATTTCT--A-AAATTTTCT------TT-----------------------AG-----A--------G---------A---------GACCCCC--C-----C-----CC-------CC-----CC---C-CC---C-C--C--C--attacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|7 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttat---------AAATTCC--C-----C-----TC-------CTCAGT-AC---A-CCTA-C-C--C--CC-AC--------TTGCAACATCGCTG--------CTT-AT--------------------ATCtttaaaaaaaagaaattcccctcctcagtacacctacccccacttgcaacatcgctgcttatatcaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : ctttaaacataatgcgcgtatccaaacatacgcacgtacgccaatacgtacaattcgtcagcaaaaagttaaaacatagaaacttcaaatagcatctacataaaaactaaaggctgagaaggttactaatttcttccaaataattacctatttcttccacagtaatcttttcagttatttataaatataacatgagacaaaattgtttgtcttctaatttctaaaattttctttagagagacccccccccccccccccccctttaaaaaaaagTCCAA---A--T-------G-C-ATAAAAACTGAAGGCTGTAATGGTTACGT-GATAATTTCTTCCG----AAGAT-----ATCAATTGTAATTTAA---CTaaaacctgttaaaatatgctcatatatattgtatttgattaatttcttttcattttacaaa
gi|8 : AGTATAA---GATGAGAA--AACATA--------ATTTGT------C-TT--CTAATTGTT--G-AAATGTTCT------TT-----------------------TT-------------------------------------CCCC--C-----C-----CC-------CC-----CC---C-CCCC-C-C--C--C--A-------------AAAAGCCCT---------CCC-AC--------------------ACCAACCCTAA-----CAGTTTAAACCTGTTCAGATCCGCTCCTttttcttccgcagtaattatttcaattatttttagtataagatgagaaaacataatttgtcttctaattgttgaaatgttctttttcccccccccccccccccccccaaaaagccctcccacaccaaccctaacagtttaaacctgttcagatccgctcctcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
gi|9 : tccaaatgcataaaaactgaaggctgtaatggttacgtgataatttcttccgaagatatcaattgtaatttaactttttcttccgcagtaattatttcaattatttttG----AGCAT-----AT-AGT--TAGTTTATTTTCTTTCAAACG---GCGAGA-TAATGTCA--TGA-CTTAAGCGGCGCCATAA--GCAATGATT----AT-TCAAACGATATAAAAT--TTATAACTG---C-TTTCCTAACCTTACTAATAT-G-------TAT-T-------ATAACA-GTGACAAAC--AAAATGCCACATTAACGCTGACATATAG---CATAAGAA--CGCAAT--------AGTTGC------C-TT--CTAGTTTTC--A-AAAATTT------------------------------------------------------------------------------------C-----TC-------CT-----AC---A-CTTA-C-CCTC--C--AC--------TCGTACCGTCGCTG--------CTC-ATGTTGAAGCTATGCTATGCAGATATGCCAT-C-----CAGTTCAAATTCATTCAGGAACGcgtaatgggtagagtgacaagtcccttcgtaaaaaaatatattattctataggtcacatgcaaactattatgaggtgtataaacaccagaaaacaagtcaaccattattttggatacagttacagataaaagtgaacttttatcgct
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): TCTTAGACCCTGGTCATAATGATTAATAGCGTTCTTATACTTTAACGGTACTTTATTAGAAATATTTA
Unaligned ( gi|39 ): TACATAATGAGTCAAAAAAATTTCTTTGCTTATATAA