lowQualScore : 11 1 1 222222 666666666666666666666666666 2222222222 3333333333333333333333333333333 111111111111 2222222222222222222 2222222 3333333333333333 111 1 1 11 1 1 22222222 1 1 1 333333333 111 11 111 1 1 1
lowQualScore : 2 0 6 5 6666 11 4 6 99 5 4 2 3 6 3 33 5 444444 333333333333333333333333333 6 33 2222222222 5 7777777777777777777777777777777 111111111111 22 222 6 1111111111111111111 9999 7777777 1 3 9999999 66 222 222 2 22 0000000000000000 55 22 222 222 222 22 8888 22 33 222 5 1 66 2 3 0 33 6 3 00 1 1 5 66 55 2 7 66 11111111 5 3 8 3 7777777 4 5555 000000000 888 444 0 2 2 55 2 777 6 3 7 7 1 7 5
lowQualScore : . . . . .... .. . . .. . . . . . . .. . ...... ........................... . .. .......... . ............................... ............ .. ... . ................... .... ....... . . ....... .. ... ... . .. ................ .. .. ... ... ... .. .... .. .. ... . . .. . . . .. . . .. . . . .. .. . . .. ........ . . . . ....... . .... ......... ... ... . . . .. . ... . . . . . . .
lowQualScore : 2 2 0 5 5555 99 2 5 77 5 9 2 5 0 4 77 0 777777 777777777777777777777777777 8 77 1111111111 2 5555555555555555555555555555555 777777777777 22 888 6 2222222222222222222 3333 7777777 5 1 3333333 33 777 777 8 00 6666666666666666 44 00 555 888 555 00 5555 00 00 222 0 6 11 9 4 2 33 6 4 33 7 4 1 77 66 9 9 88 33333333 4 7 5 1 6666666 1 0000 111111111 222 444 1 5 7 44 9 444 0 7 0 6 9 1 2
consensus : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCG----GGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCAT--TT--CCC----------------CC---------GACTGTATAACTGTGGAATGGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAACGTTGG-T-NTA-A--TT-T-AAC----T----C-----TTGGTT-----------AT--CT---TTATCC----T--------------AAAT--NTTAAA-------AT-AAC-TAAAATT---TAA--AT---AC---CAG--ATAT-C----A-T---T---A--TA--TT---AGT-GTT---TTTA--A--CCT--T-TGG-N-TAAAGATAACCCAGGCCTGA-TTAAAATATAACCAACGTTTATACAAG-TTGTTNTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCA-GA-GA-AAAAA--GT----TT--AAATTCTCTTCCCC-A-TCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGC----CCG---GCCTGTCCTGAGTTA-CTTTCTT---CAGAAAA-TCTAGATGGGAATCTA-AAC--T-TTT--GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
Reference ( gi|3 ) : AGAGACGGAAAACATTTTGTCACAAAGAACGTGCCCATCG----GGAATCGAACCCGGGATTTCCGTATCAACAAGTACGTACGCTACCATTGCGCTACCCGGGCGGGTTTGCATTCACAGTTAGAAGTACAGGTCGGAAATAG--GTACCATGCTATTTCAT--AT--CCC----------------AT---------GATTGTATAACTGTGGAATGGTTT--GGACTTCAGCAGCCAA--G-------TGTATAAACGTTGG-T-GTA-A--TG-T-AAC----T----T-----TTGGTC-----------AT--CT---TTATCC----T--------------AAAT--CTTAAA-------AT-AAC-TAAATTT---TAA--AT---AC---CAG--ATAT-C----A-T---T---A--TA--TT---AGT-GTT---TTTA--A--CTT--T-TGG-G-TAAAGCTAACCTAGGCCTGA-TTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGTATTGTTGTTTTTTAGGCCA-AA-AA-AAGAA--GT----AT--AAATTCTCTT-CTC-A-CCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGC----CC----TCCTGTCCTGAGTTA-CGTTCTT---CAGAAAA-TCTAGATGGGAATCTA-AAC--T-TTC--GTAACATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTCAAATATCTTGTTTATGGTGATCTTGACTTGAAACAAGAGGGCCATGTTGGCAAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|11 : AGAGACCGAGAACATTTTGTCACAAAGAACGTACCGGTCG----GGAATCAAACCCGGGACCTCTGAACTGACAAGTATGTACGCTACCATTGCGCTACCCAGGTGGATTCGCATTTACAGCTAGAAGTACAAGTCGGAAATAG--GTAAAATGCTATTTCAT--TT--CCC----------------CC---------GACTGTATAACTGTGGAATTGTTT--GGACTTCAGCAACCAT--T-------TGTATAAACGTTGG-T-TTA-AT-TT-T-AAC----T----C-----TTTGTT-----------AT--CT---TTATCC----T--------------AAGT--CTTAAA-------AT-AAC-TAAA-AT---TAA--AT---AC---CAG--ATAT-A----A-TTTAT---A--TA--TA---AGT-G-T---TTTA--A--CCT--T-TAG-T-TAAAGATAACCCTGGCCT---TT----TAT-----ACATTTATACAAG-TTGTT
gi|20 : ggtcaggtatcctaacggttttccaggaattcaatactaaccgatctttgcagataactggcactttcccctattgaaacAGAAGCGGAGAACATTCTGTCCCAAAGAACTTTCCCGTCG----GGAATCGAACCCAGGACATATGAATTGACAAGCATGTACGCTGCCATTGCGCTACCCAAGCGGGTTTGCATTCACAGTAAGAAGTACAAGTCGGAAATTG--GTACAATGCTATT
gi|29 : acaactgacaacttcatcatttgaaacAGAGGCGGAGGACATTTTGTCACAAATAACGTGCCCGTCG----GGAATCGAACCCGGTACCTCTGAATTGACAAGCACGTACGCTACCACTGCGCTACC
gi|21 : AGGCAAAGAACATTTTGTCACAACGAAATTT----TCGGAACGGAATCGAATCCGAGGCCTCTGGATTAACAAGGCTGTATGCTACCACTGCGCTACCC
gi|6 : cagtactaacagatctttgcaagtaactaacatctattttccttacttgaaaccaAGCATTTTGTCACGAAGAACGTGCCCGTCG----GGAGTCGAACCCGGAACCTCCGGATTGACAAGCATGTACGCCATCAGTACGCTACCCGGGCGAGTTCACATTAACAGTTAGAAGTACAAGTCGGAAATAG--GTACAGTGCTTTTTCAT--TT--CCC----------------CC---------GACTGTATAACTGTGAAATGGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAAAGTT------TA-A--TTCT-AAC----T----A-----TTGGCT-----------AT--CT---TTATTC----C--------------AAGT--CTTAAA-------AT-AAC-TAAAAGC---TAA--AT---AC---CAG--ATAT-C----ATT---T---T--TA--TA---AGT-GTG---TTTA--A--CCT--T-TGG-T-TAAAGATAACTCAGTCCTGA-CCAAAATTTAATCAACG-TTATACAAG-TTGTTGTTTCAGTCCTGAAACTTTGTAGGATTGTTGGTTTTTAGGCCA-GA-GA-AA-AA--GT----TA--AAATTCTCTTCCCC-A-CCCACACCTGTCTGAAACCCTTG-------AGAAGTCTATGTCACCTATAAATAAAAAAAACGTAC----CC----GCCTGTCTTGAGTTA-CTTTCTT---CAGAAAA-TCTAGATAGGAATATA-AACT-T-TTT--GTAATATGACATCGCAACTACAGTTCCCCATGTATATTTTAAGGGTTAAATATCTAGTTTGCGGTGATCTTGACTTTAAACAAGAAGGTCATGTTGGTCAAAGGTCGCTTAATTGATTATATacagtcttcaacgtatagttag
gi|4 : gACATTTTGTCACAAAGAACCTGCCCGTCG----GAAATCGAATCTGGGACCTCTCAATTGACAATCATGTACGCTACCATTGTGCTACCCAGGCGGGTTCGCATTCAAAGTTGGAGGTACAAGTCAGAAGTAG--GTACAATGCTATTTCAT--TTC-CCC----------------CC---------GACTGTATAACTGTGGAATGGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAATGTTGG-T-TTA-AT-TT-T-AAC----T----C-----TTGGTT-----------AT--AT---TTAGTT----T--------------AAGT--TTTAAA-------AT-AAC-TAATATT---TAA--AT---AC---CAG--ACAT-C----A-T---TA--A--TA--TT---AGT-GTG---TTTA--C--CCT--T-TGG-C-TAAACATAACCCAGGCCTGA-TTAAAATATAACCAACACTTATACAAG-TTGTTATCTC-GTCCTTAAACTTTGTGAGAATGTAGGTTTTTAGGCCA-GA-GA-AAAAAC-GT----TT--AAATTCTCTTCCCC-A-TCCACACCTGTCCGAAACCCTTG-------GGAAGTCAATGTCACCTATAAAT-ATAAAAATATGC----CC--------GGCC----------TTCTT---CAAAAAA-TCTAGATGGGAATCTA-AAC--T-TTT--GTAATATGGCATTGCATCTGCAGT
gi|10 : ggtttaatgcctcttcaacagttttcagttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACATTTTGTTACAAAGAACGTGCCCGTCA----GGAATCGAACCCTGAATTTCTGATTTGACAAGCATGTACGCTACCATTACGCTACCCTCGCGGGATCACATTCACAATTAGAAGTACAAGTTGGAAGAAG--GTACAATGCTATTTCAT---T--CCC----------------CTCCCCCACCCGACAGTATAACTGTGGAATAGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAACGTCGG-T-TTA-AT-TT-T-AAC----T----C-----ATGGTT-----------AT--CT---TTATCC----T--------------AAGT--TTTAAA-------AT-AAC-TAATATT---TAA--AT---AC---CAG--ATAT-C----ATT---T---A--TA--TT---AGT-GTT---TTTA--A--CCT--T-TAG-T-CAAAGATAACCCAGGCCTGA-TT--AATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCATAAAc
gi|17 : tttaatgccacttcaacagttttcagttatataattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACTTTTTTTCACAAAGAACTTGCCCGTCG----GGAATCGAACCTGGGACATCTGAATTGACAAGCATGTACGATACCATTGCGCTACACAGGCGAGTTCGCATTCAAAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTTC
gi|22 : gtttaatgtaacttcaacagttgtcagttatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACATTCTGTTATAAAGAACGTGCCCt
gi|5 : ggtttaacgccatttcaacagttttcagttatatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTTTGTCACAAAGAACGTGCCCATCG----CAAATCGAATCCTGGATCTCCGGATTAACAAGCATGTACGCTACCATTGCGCTACCAGAGCGGGTTTGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTTAT--TT--CCC----------------AC---------GACTGTATTACTGTGGAATGGTTT--AGACTTCAGCAGTCAA--T-------TGTATAAACGTTGG-T-GTA-A--TA-T-AAC----T----C-----TTGGTC-----------AT--CT---T-ATCC----T--------------AAAT--CTTAAA-------AT-AAC-TAATATT---TAA--AT---AC---CAG--ATAT-C----A-T---T---A--TA--TA---AGT-GTT---TTTA--A--CCT--T-TGG-G-TAAAGATAACCTATGCCTGA-TTAAAATATAATCAACGTTTATACAAG-TAGTTCTTTCAGTCCTTTAACTTTGTGGTATTGTTGGTTTTAAGGCCA-AA-GA-AAGAA--GT----CT--AAATTCTCTT-CCCCA-CCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATTAATAAAAAAAATGTGC----CC----TCCCGTCCTGAGTCA-CGTTCTT---CAGAAAA-TCTAGATGGAAATCTA-AAC--T-TTC--GTAATATGGCATTGCATCTGCAGTGCCCCATATAGATTTCAAGGGTCAAATATCTAGTTTTTGGTGATCTTGACTTGAAACAAGAGGGACATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|1 : ATTTTGTCACAAAAAAAGTACCCGTCG----GGAATCGAATCCGGGACCTCAGAATTGACAAGCATGTACGCTGCCATTGTACTACCCGGGCAGGTTCACATTCACAGTTAAAAGTACAAGAAGGAAATAG--GTACAATGCTATTTCAT--TT--CCC----------------CC---------GACTGTATAACTGTGGAATGTTTT--GGACTTCAGCAGCCAA--T-------TGTATAAACGTTGG-T-TTA-AT-TT-T-AAC----T----C-----TTGCTT-----------AT--C----TTATAT----T--------------AAA------AAA----------AAC-TAATATT---AAA--AT---AC---CGG--ATAT-C----ATT---T---A--TA--TT---AAT-GTG---TTTA--A--CCT--T-TGG-T-TAAAGATAACCCAGGCCTGA-TTAAATTATAATCAGCGTTTATACAAG-TTGTTCTTTTAATCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCA-GA-GC-TTAAC--GT----TT--AAATTCTCTTCCCC-A-TCCACACCTGTTTGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAAATGTGC----CT----GCCAGTCCTGAATTA-CTTTCTT---CAGAAAA-TCGAGATTGGAATCTA-AAC--T-TTTA-GTAATATGGCATTGCATCTGCAGTGCTTCATGTAGATTGTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCAAGTTGGCCAAATGTCACTTAATTGATTATATAATGACCCATg
gi|2 : gtataatgccacttcaacagtttcagttataaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTTGTCACAAAGAACGTGTCCGTCG----GGAATCGAAACCGGAACCTCTTAATTGACAAGCATGTTCACTATCATTGCGCTACCCAGGCAGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAA-------------GCTATTTCATCCAC--CCCCCCCCCCCCCCCCCCCAC---------GACTGTATAACTGTGTAATAGTTT--GGACTTAAGCAGCCAA--T-------TGTATAAACGTTGG-T-TTA-A--TT-TTAAT----T----C-----GTGGTT-----------AT--CT---TTATCC----T--------------CAAT--CTTAAA-------AT-AAC-TAATATT---TAA--AT---AC---CAG--ATAT-C----A-T---TT--A--TT--TT---AGT-GTT---TTTA--A--CCT--T-TGG-T-TAAAGACAACCCAGGCCTGA-TTAAAATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTGGGATGGTAGGTTTTTAGGCCA-GA-GACAAAAA--GT----TT--AAATTCTCTT-CCCAA-TCCACACTTGTCCGAAGCCCTTG-------AGAAGACAATGTCACCTATAAAT-ATAAAAATGTGCACGGCC----TC----CCAGAGTTA-TTTTCTT---AAAAAAA-TCTAGATGGGAATCTA-AACT-T-TTT--GTAATATGGCATTGCATCTGCAGTATCCCAg
gi|25 : attaatgccacttcttcaacagttttcatttatataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTCGTCACAAAGAACGTACTCGTCG----GGAATCGAACCCGGGCCATCTGAATTGACAAGCATGTACGCTACCATTGCGTTGCCCAGGCGGGTTCGCATTCACAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTT
gi|24 : TTTGTCACAAAGAACGTGCGCGTCG----GGAATCGACCCCGGTACATCTGAATTGATAAGCATGTACGCTACCGTTGCGCTACCCGGGCGGGTTCACATTCTCAGTAATAAGAACAAGTCGAAAGTAG--GTACAATGCTATTT
gi|14 : ATGTACGCTACCTTTGCGCTACTCCGGCGGATTCGCATTCACAGTAGGAAGTACAATTCCGAAATAG--GTACAATGTTATTTCA-------CCC---------------------------GACTGCATAACTGTGGAATGGTTT--GGACTTCAGCAGCAAA--T-------TGTATAAACGTTGG---GTA-AAGTT-T-AAC----T----C-----TTGGTT-----------AT--AT---TTATCC----T--------------AAAT--ATTAAA-------AT-AAC-TAAAATT---TGA--AT---AC---CAG--ATAT-C----A-T---TT--A--TA--TT---A-T-GGT---TTTA----------------------GATAACCCAGCCCTGA-TAAGAATATAATCAACGGTTATACCAG-TTATTCTTTCAGTCCTTAAACTTTGAGGAATTGTCG-GTTTTAGGGCA-GA-GA-AAAAA--GT----TT--A
gi|12 : gaGTACAAGTCGGAA-------------GCTATTTCAT--TT--CCC----------------CCC--------GACTGTATAACTGTGGAATAGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAACGTTGG-T-TTA-A--TT-TTAAC----T----C-----ATGGTT-----------AT--CT---TTATCC----T--------------AAGT--CTTAAA-------AT-AAC-TAATATT---TAA--AT---AC---CAG--ATAT-C----A-T---TG--A--TA--TT---AGT-GTT---TTTA--A--CCT--T-TGG-T-TAAACATAACCCAGGTCTGA-TTAAAATATAACCAACATTTATACACG-TTGTTATTTC-GTCCTTAATCTTTGTGGGATTGTAGGTTTTTAGGTCAGAG-AA-AAAAA--GT----TT--AAATTCTCTTCCCC-A-TCCATACTTGTCAGAAACCCTTG-------AGAAGACAATGTCACCTATAAAT-AAAAAAATGTGC----Ctgggaagtctatgtcacctattaataaaagaattgtgcccgcccgtcctgggttacttcttcagaaaataaag
gi|16 : ATAGAAGTACAGTGCTATTTCAT--TTTACCC---------------------------GAGTGTATAGCTGTGGAATGGTTT--GGACTTCAGCAGCCAATTGTATCAATTGTATAAACGTTGACT-GAA-T--TG-G-AAC----T----C-----TTGGTT-----------AT--CT---ATACCT----TGAGTCTTACAATTGAAATAACTTAAA-------AT-AAC-TAAAATC---TAA--AT---AA---TAG--ATAT-C----ATT---T---A--TA--TT---AGT-GTT---TAAA--A--CCT--T-TGA-A-TAAATATAACCCAGGCCTGA-TTAAAATTTAATGAACGTTTATAAAAG-TTGTTCTTTCAGCCCTTAAAGTTTGTGaagatgggaatctaattttttttgtaatctgacattgcatctgcagtgtccca
gi|13 : gTAG--GCACAATGCTATTTCAT--TT--CCC----------------CC---------GACTGTATAACTGTGGAATTGTTT--GGACTTCAGCAGCCAG--T-------TGTATAAACGTTGG-T-TTA-A--TT-TTAAC----T----C-----TTTGTT-----------AT--CT---TTATCC----T--------------TAGT--TTGAAA-------AT-AACATAAA-TT---TAA--AT---AC---CAG--ATAT-C----ATT---T---A--TA--TA---AGT-G-T---TTTA--A--CCT--T-TGG-T-TAAAGATAATCCAGGCCTTA-CTTAAATGTAATCAAATTTAATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTAGGATTGTAGGTTTTTAGGCCA-GA-AA-AATAAAGGTTTAAATTCAAATTCTCTT-CCC---CATACACCTGTCCGAAACCCTTG-------AGAAGTCAA-------TATAAAT-AACAAAATGTGC----CCG---GCCT-TCATGAGCTA-T-TTCTTGTCCAGAAAA-TCTAGATAGGAATCTA-A
gi|7 : TGTATTACTGTGGAATGGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAACGTTGG-T-TTA-A--TT-TTAAC----T----C-----TTGCTT-----------AT--CT---TTATTTCTAGT--------------AAGT--CTTTAA-------AT-AAC-T---TTTATTTAA--AT---AC---CAGGGATAT-C----A-T---TT--A--TA--TT---AGT-GTT---TTTA--A--TCA--T-TGG-T-TAATGATAACCCAGGCCTGA-TTAAAATATAATCAGCGTTTATACAAA-TTGTTCTTTCAGTCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCA-GA-GG-AAAAA--GT----TT--AAATTCTCTT-CCC-AATCCACACCTGTCCGAAACACTTG-------AGAAGTCAATGTCACCTATAAATAAAAAA--TATGC----CC----GCCAGTCCTGTGTGA-CCCTCTT---CAGAAAA-TCTAGATGGGAATCTA-AAC--T-TTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTATATTTTAAGCGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGATGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGACCCATtgttttat
gi|8 : ccagcTGTATAACTGTGAAATGGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAACATTGG-T--TA-A--TT-T-TAT----T----C-----TTGCTT-----------AT--CT---TTATTTATAGT--------------AAGT--CTTAAA-------AT-AAC-T-----T---TAA--AT---AC---CAG--ATGT-C----A-TA--T---A--TA--TT---AGT-GTT---TTTA--A--CCA--T-TAG-T-TAAAGATAACCCAGGCCTGA-TTAAAATAAAATCAGCGTTTATACACG-CTGTTCTTTCAGTCCTT-----TTGTGGGATTGTTGTTATTTAGGCCA-GA-GA-AAAAA--GT----TA--AAATTCTCTT-CCCCA-TCCACACCTGTCCGAAACACTTG-------GGAAGTCATTGTCACCTATAAATAAAACA--TGTGC----CC----GCCAGTCCTGTGTGA-CTTTCTT---CAGAAAA-TCTAGATGGGAATCTA-AAC--T-TTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATATATATTTTAAGCGTTTTATTTCTAGTTTGTGGTGATCTTGACTTTAACCTAGATGGTCATGTTGGCTAAAGGTAGCTTAATTGAGTATATAATGAg
gi|9 : ggcTATAACTGTGGAATGGTTT--GGACTTCAGCAGCCAA--T-------TGTATAAACATTGG-T-TTA-A--TT-T-AAC----T----C-----TTGGTT-----------AT--CT---TTATCT----T--------------AAGT--CTTAAA-------AT-AAC-TAATATT---TAA--AT---AC---CAG--ATAT-C----A-T---TT--A--TA--TT---AGT-GTG---TTTA--A--CCT--T-TGG-T-TAAAGATAACCCAGGTGTAA-TTAAAATATAATCAACGTTTGTACAAG-TTGTTCATTCGGTCCTTAAACTTTGTGGGAATGTTGGGTTTTAGGCCA-GA-GA-AAAAC--GT----TT--AAATTCTCTT-CTCCA-TCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAGA-TGTGC----CC----GCCCGTCCTGTATTA-CTTTCTT---CAAAAAAATCTAGATAGGAATCT-------T-TTT--GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAGTATCTAGTTTGTGGTGATCTTGACTTTAAACAATAGGGTGATGTTGACCAAAGGTCGCTTAATTGATTATATAATGATCCATctaatg
gi|6 : GTTTCAGGACTGAAACAACAAC--T-------TGTATAA-CGTTGA-T-----------T-AAA----T----T-----TTGGTCAGGACTGAGTTAT--CT---TTAACC-------------------AAAG--GTTAAACACACTTAT-AA---AAAT-------G--AT---AT---CTG--GTAT--------T---T---AGCTT--TT---AGT-TAT---TTTA--A--GAC--T-TGGAA-TAAAGATAGCCAA----TAG-TTAGAAT-TA---AACTTTTATACAAT-TGGCTGCTGAAGTCC--AAACg
gi|8 : gagcattttgtcacgaagaacgtgcccgtcgggagtcgaacccggaacctccggattgacaagcatgtacgccatcagtacgctacccgggcgagttcacattaacagttagaagtacaagtcggaaataggtacagtgctttttcatttcccccgactgtataactgtgaaatgAACAGC-----G-------TGTATAAACGCTGATT-TTA-T--TT-T-AATCAGGC----C-----TGGGTT-----------AT--CT---TTA-AC----T--------------AATG--GTTAAA-------AA-CAC-TAA-------TAT--AT---AT-----G--ACAT-C------T---G---G--TA--TTTAAAGT-TAT---TTTAAGA--CTTACTATAA-A-TAAAGATAA-----GCAAGA-ATAAAAT-TAACCAATGTTTATACAAT-TGGCTGCTGAAGTCC--AAACtttgtaggattgttggtttttaggccagagaaaaagttaaaattctcttccccacccacacctgtctgaaacccttgagaagtctatgtcacctataaataaaaaaaacgtacccgcctgtcttgagttactttcttcagaaaatctagataggaatataaactttttgtaatatgacatcgcaactacagttccccatgtatattttaagggttaaatatctagtttgcggtgatcttgactttaaacaagaaggtcatgttggtcaaaggtcgcttaattgattatat
gi|12 : ggctgtataactgtgaaatgCAAC-G-------TGTATAAATGTTGG-TTATA-T--TT-T-AAT----CAGACC-----TGGGTT-----------AT--GT---TTAACC-------------------AAAG--GTTAAA-------AA-CAC-TAA-TAT---CAATGAT---AT---CTG--GTAT--------T---T---AAATA--TT---AGT-TAT---TTTA--AGACTT--A--GG-A-TAAAGATAACC-A----TGAGTTAAAATTAAACCAACGTTTATACAAT-TGGCTGCTGAAGTCC--AAACTctttcagtccttttgtgggattgttgttatttaggccagagaaaaaagttaaaattctcttccccatccacacctgtccgaaacacttgggaagtcattgtcacctataaataaaacatgtgcccgccagtcctgtgtgactttcttcagaaaatctagatgggaatctaaactttttgtaatatggcattgcatctgcagtgccccatatatattttaagcgttttatttctagtttgtggtgatcttgactttaacctagatggtcatgttggctaaaggtagcttaattgagtatataatgactaatg
gi|5 : gtacaagtcggaagctatttcatttccccccgactgtataactgtggaat-------TGTATAAACGTTGATT-ATA-T--TT-T-AA-----T----CAGGCATAGGTT-----------AT--CT---TTA-CC----C--------------AAAG--GTTAAA-------AA-CAC-TTA--TA---TAATGAT---AT---CTG--GTAT--------T---TAA-A--TA--TT---AGT-TAT---TTTA--A--GAT--T-TAG-G-ATAAGATGACCAAG----AG-TTATATTAC-ACCAACGTTTATACAA--TTGttatttcgtccttaatctttgtgggattgtaggtttttaggtcagagaaaaaaagtttaaattctcttccccatccatacttgtcagaaacccttgagaagacaatgtcacctataaataaaaaaatgtgccaagatgggaatctaattttttttgtaatctgacattgcatctgcagtgtccca
gi|1 : attttgtcacaaagaacgtgcccatcgcaaatcgaatcctggatctccggattaacaagcatgtacgctaccattgcgctaccagagcgggtttgcattcacagttagaagtacaagtcggaaataggtacaatgctattttatttcccacgactgtattactgtggaatggtttagacttcagcagt-------TGTATAAACGCTGA-TTATA-A--TT-T-AAT----CAGGCC-----TGGGTT-----------AT--CT---TTAACC-------------------AAAG--GTTAAACAC----ATTAATATAAAT-------G--AT---AT---CCG--GTAT-T----T-T---A---A--TA--TT---AGT-TTT---TTTT--A--ATA--T---------AAGATAAGCAAGA----G-TTAAAATTAAACCAACGTTTATACAA--TTGagtagttctttcagtcctttaactttgtggtattgttggttttaaggccaaagaaagaagtctaaattctcttccccacccacacctgtccgaaacccttgagaagtcaatgtcacctattaataaaaaaaatgtgccctcccgtcctgagtcacgttcttcagaaaatctagatggaaatctaaactttcgtaatatggcattgcatctgcagtgccccatatagatttcaagggtcaaatatctagtttttggtgatcttgacttgaaacaagagggacatgttggccaaaggtcgcttaattgattatataatgatccatg
gi|9 : gtataatgccacttcaacagtttcagttataaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattttgtcacaaaaaaagtacccgtcgggaatcgaatccgggacctcagaattgacaagcatgtacgctgccattgtactacccgggcaggttcacattcacagttaaaagtacaagaaggaaataggtacaatgctatttcatttcccccgactgtataactgtggaatgttttggacttcagcagc-------TGTACAAACGTTGA-TTATA-T--TT-T-AAT----TACACC-----TGGGTT-----------AT--CT---TTAACC-------------------AAAG--GTTAAA-------CA-CAC-TAA--TA---TAA--AT----------G--ATAT-CTGGTA-T---TTAAA--TA--TT---AGT-TAT---TTTA--AGACTT--A--AG-A-TAAAGATAACCAAGA----G-TTAAATTA-AACCAATGTTTATACAAT-TGGCTGCTGAAGTCC--AAACagttgttcttttaatccttaatgtttgtgggattgttggtttttaggccagagcttaacgtttaaattctcttccccatccacacctgtttgaaacccttgagaagtcaatgtcacctataaataaaaaaatgtgcctgccagtcctgaattactttcttcagaaaatcgagattggaatctaaacttttagtaatatggcattgcatctgcagtgcttcatgtagattgtaagggttaaatatctagtttgtggtgatcttgactttaaacaagagggtcaagttggccaaatgtcacttaattgattatataatgacccatg
gi|2 : tataactgtggaatg-------TGTATAAATGTTGG-TTATA-T--TT-T-AAT----CAGGCC-----TGGGTT-----------GT--CT---TTAACC-------------------AAAG--GTTAAA-------AA-CAC-TAAAAT-----AA--AT----------G--ATAT-CTGGTA-T---TTAAA--TA--TT---AGT-TAT---TTTA--A--GAT--T-GAG-GATAAAGATAACC-ACG---AA-TTAAAATTAAACCAACGTTTATACAAT-TGGCTGCTTAAGTCC--AAACTagttgttcattcggtccttaaactttgtgggaatgttgggttttaggccagagaaaaacgtttaaattctcttctccatccacacctgtccgaaacccttgagaagtcaatgtcacctataaataaaaagatgtgcccgcccgtcctgtattactttcttcaaaaaaatctagataggaatctttttgtaatatggcattgcatctgcagtgccccatgtagattttaagggttaagtatctagtttgtggtgatcttgactttaaacaatagggtgatgttgaccaaaggtcgcttaattgattatataatgatccatg
gi|10 : attaatgccacttcttcaacagttttcatttatataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttgtcacaaagaacgtgtccgtcgggaatcgaaaccggaacctcttaattgacaagcatgttcactatcattgcgctacccaggcaggttcgcattcacagttagaagtacaagtcggaagctatttcatccaccccccccccccccccccccacgactgtataactgtgtaat-------TGTATAAATGTTGG-T--TATA--T--T-AAT----CAGGCC-----TGGGTT-----------AT--CT---TTG-AC----T--------------AAAG--GTTAAA-------AA-CAC-TAA--TA---TAA--AT----------G--ATAT-CTGGTA-T---TTAAA--TA--TT---AGTTATT---TTAA--A--ACT--T-AGG-A-TAAAGATAACC-A----TGAGTTAAAATTAAACCGACGTTTATACAAT-TGGCTGCTGAAGTCC--AAACTagttgttatttcgtccttaaactttgtgggatggtaggtttttaggccagagacaaaaagtttaaattctcttcccaatccacacttgtccgaagcccttgagaagacaatgtcacctataaatataaaaatgtgcacggcctcccagagttattttcttaaaaaaatctagatgggaatctaaactttttgtaatatggcattgcatctgcagtatccca
gi|14 : tttaatgccacttcaacagttttcagttatataattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttgttacaaagaacgtgcccgtcaggaatcgaaccctgaatttctgatttgacaagcatgtacgctaccattacgctaccctcgcgggatcacattcacaattagaagtacaagttggaagaaggtacaatgctatttcattcccctcccccacccgacagtataactgtggaatGTATAACCGTTGA-T--------TA-T-A------T----T-----CTTATC-----------AGGGCTGGGTTATCT----A--------------AAAC--CATAA---------T-A---TAAAT-------G--AT---AT---CTG--GTATTC----A-A-------A--TT--TT---AGT-TAT---TTTA--A--TAT--T-TAG-GATAAATATAACCAAGA----G-TTAAACTTTACCCAACGTTTATACAAT-TTGCTGCTGAAGTCC--AAACagttgttatttcgtccataaa
gi|11 : gaatgtacgctacctttgcgctactccggcggattcgcattcacagtaggaagtacaattccgaaataggtacaatgttatttcacccgactgcataactgtggaatgGGTT-----------AT--CT---TTA-AC----T--------------AAAG--GTTAAA-------AC-ACT-TATATAT---AAATTAT---AT---CTG--GTAT--------T---T---AA-TT--TT---AGT-TAT---TTTA--AGACTT--A--GG-A-TAAAGATAACAAAGA----G-TTAAAATTAAACCAACGTTTATACAAA-TGGTTGCTGAAGTCC--AAACcagttattctttcagtccttaaactttgaggaattgtcggttttagggcagagaaaaaagtttatgggaagtctatgtcacctattaataaaagaattgtgcccgcccgtcctgggttacttcttcagaaaataaag
gi|13 : ggtcaggtatcctaacggttttccaggaattcaatactaaccgatctttgcagataactggcactttcccctattgaaacagagaccgagaacattttgtcacaaagaacgtaccggtcgggaatcaaacccgggacctctgaactgacaagtatgtacgctaccattgcgctacccaggtggattcgcatttacagctagaagtacaagtcggaaataggtaaaatgctatttcatttcccccgactgtataactgtggaattGATT-----------AT--CT---TTAACC-------------------AAAG--GTTAAA-------AC-ACT-TATAT------AA--ATGATAT---CTG--GTAT--------T---T---A--AA--TT---TAT-GTTATTTTCA--A--ACT--A-AGG-A-TAAAGATAACAAAGA----G-TTAAAATTAAACCAACGTTTATACAAC-TGGCTGCTGAAGTCC--AAACctggccttttatacatttatacaagttgtt
gi|18 : taggcacaatgctatttcatttcccccgactgtataactgtggaatt-------AT-AAC-TAAAATT---TAA--AT---ACGATCGA--ATGT-T----A-T-------A--TA--T-----GT-GTT---TTTG--A--CCT--T-TGG-T-TAAAGATAACCTAGACCTGA-TTAAAATATAATCATCGTTCGTACAAGTTTGTTTTTTCAGTCCTTAAACATTGTAGGATTGTTGGTTTTTAGGCCA-GA-GA-AAAAA------------AAAATCTCTTCCCC-A-CCCACACCTGTCCGAAACCTTTG-------AAAAGTCAATGGCACCTATAAATAAAAAA---GTGA----GC----GCCCGTACTGAGTTA-CTTTCTT---CAGAAAA-TCTAGATGGGAcaggccttacttaaatgtaatcaaatttaatacaagttgttatttcgtccttaaactttgtaggattgtaggtttttaggccagaaaaataaaggtttaaattcaaattctcttccccatacacctgtccgaaacccttgagaagtcaatataaataacaaaatgtgcccggccttcatgagctatttcttgtccagaaaatctagataggaatctaatgttttat
gi|19 : G--ATAT-C----A-T---TT--A--TAAATT---AGT-GTT---TTTA--A--CCT--T-TGG-G-TAAAGATAACCCAGGCCTGA-TTAAAATATGATCACCGTTCAT-CAGG-TTGGTCTTTCAGTCCTTAAACTTTGTGGTATAATTTGTTTTTAGGCCA-GA-GA-AAAAA--GT----TT--AAATTTTCTT-CCCAA-CCCACACCTGCCCG--ACCCTTG-------AGAAGGCAAAGTCACCTATA
gi|15 : --TA--TT---AGT-GTT---TTTT--A--CCT--T-TGG-T-TAAAGATAACACAGGCCTGA-TTGAAATATAATCAACATTTATACAAG-TTGTTATTTC-GTCCTTAGATTTTGTGGGATTGTAGGTTTTTAGGCCA-GAGAA-AAAAA--GT----TT--AAATTCTCTT-CTCGA-TTCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCAATAAATAAAAAAAATGTGC----CCG---GCCT-TCCTGAGTTATTTTTCTT---CA-AAAA-TCTAGATGGGAATCTATTTT--T-TTT--GCAATATAGCATTGCATCTGCAGTGTCCCATATCGATTTTAAGGGTTAAATATCTAGTTTGTGGTCATTTTAACTTTAAACAAGAGGTTCATGTTGGTCAAAGGTCACTTAATTGATTTTATAATGATCCATggaa
gi|23 : CTGAAACCCTTGCCCCCGGAGAAGTCAATGTCACCTATAAATAAAAAAAATGTGC----CCG---GCCT-TCCTGAGTTA-TTTTCTT---CAAAAAG-TCTAGTTGGGAATCTA-AACT-T-TTT--GTAATATGGCATTGCATCTGCAGTGTCCCg
gi|26 : CGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAC-AAAAAAATGTGC----CCG---GCCT-TCCTGAGTTA-TTTTCTT---CAAAACA-GCTAGATGGGAATTAA-AAC--TATTT--GTAATATGGCATTGCATCTGCAGTGTCCC
gi|27 : AAACCCTTG-------AGAAGTCAATGCCACCTATAAAT-AAAAAAATATGC----CCG---GCCT-TCCTGAGTT----TTCTT---CAAAAAA-TCTAGATGGGAATCTA-AACT-T-TTT--GTAATATAGCATTGCATCTGCAGTGTCCCA
gi|14 : TG-------GGAAGTCTATGTCACCTATTAATAAAAGAATTGTGC----CC----GCCCGTCCTGGGTTA-C-TTCTT---CAGAAAA-T
gi|28 : gaatgtacgctacctttgcgctactccggcggattcgcattcacagtaggaagtacaattccgaaataggtacaatgttatttcacccgactgcataactgtggaatggtttggacttcagcagcaaattgtataaacgttgggtaaagtttaactcttggttatatttatcctaaatattaaaataactaaaatttgaataccagatatcatttatattatggttttagataacccagccctgataagaatataatcaacggttataccagttattctttcagtccttaaactttgaggaattgtcggttttagggcagagaaaaaagtttaAGTCAATGGCACCTATAAAT--AAAAAATGTAC----CTGGCGTTCT-TCTT-ATCTA-TTTTCTT---AAAAAAA-TCGAGATGGGAATCTA-AACTTT-TTT--GTAATTTGGCATTGCATCTGCAGTGTCCCAaaag
gi|12 : AGATGGGAATCTA-ATT--T-TTTTTGTAATCTGACATTGCATCTGCAGTGTCCCA
gi|31 : gtacaagtcggaagctatttcatttccccccgactgtataactgtggaatagtttggacttcagcagccaattgtataaacgttggtttaattttaactcatggttatctttatcctaagtcttaaaataactaatatttaaataccagatatcattgatattagtgtttttaacctttggttaaacataacccaggtctgattaaaatataaccaacatttatacacgttgttatttcgtccttaatctttgtgggattgtaggtttttaggtcagagaaaaaaagtttaaattctcttccccatccatacttgtcagaaacccttgagaagacaatgtcacctataaataaaaaaatgtgccaTGCATCTGCAGTGTCCCATGTAGATTTTAA
gi|30 : TTGACTTTAAACAAGAGGTTCATGATGACCAAAGGTCGCTTACTTGATTATATAAGAATCCATttgattatataat
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|32 ): GGTTTAACGCCATTTCAACAGTTTACAGTTACAT
Alignments
lowQualScore : 22222222222222222 11111111 111111111 11 1 2222222222222222222 1111111 1 1 1 11
lowQualScore : 1 2 33 33333333333333333 22222222 3 5 000000000 4 11 2 6 0000000000000000000 444 2 5 444 33 7777777 2 33 1 2 2 1 9 0 5 2 2 2 8888888 7777777 8 5 2 2 22 444 2 5555 2 88 2 55
lowQualScore : . . .. ................. ........ . . ......... . .. . . ................... ... . . ... .. ....... . .. . . . . . . . . . . ....... ....... . . . . .. ... . .... . .. . ..
lowQualScore : 2 5 44 33333333333333333 11111111 1 7 777777777 5 77 7 0 6666666666666666666 777 7 5 444 22 2222222 2 11 8 9 2 0 2 7 3 7 7 7 7777777 2222222 2 0 4 1 99 111 2 0000 5 44 5 99
consensus : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTAT---------AAACGTTGGTTTAA--TT-T-AACTCTTGGTTATCTTTATCC----T--------------AAGTC--TT-AAAATAACTAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTA-AACT-T-TTT--GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
Reference ( family-2376 ) : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTAT---------AAACGTTGGTNTAA--TT-T-AACTCTTGGTTATCTTTATCC----T--------------AAATN--TT-AAAATAACTAAAATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGNTAAAGATAACCCAGGCCTGATTAAAATATAACCAACGTTTATACAAG-TTGTTNTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTA-AAC--T-TTT--GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|1 : ATTTTGTCACAAAAAAAGTACCCGTCGGGAATCGAATCCGGGACCTCAGAATTGACAAGCATGTACGCTGCCATTGTACTACCCGGGCAGGTTCACATTCACAGTTAAAAGTACAAGAAGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGTTTTGGACTTCAGCAGCCAATTGTAT---------AAACGTTGGTTTAAT-TT-T-AACTCTTGCTTATCTT--------------------------ATA--TTAAAAAAAACTAATATTAAAATAC---CGG--ATATCATT---T-A-TA--TTAATGTGTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAATTATAATCAGCGTTTATACAAG-TTGTTCTTTTAATCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-C-TT-AAC-G-------TTTAAATTCTCTTCCCCATCCACACCTGTTTGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAAATGTGCCT-GC-CAGTCCTGAATTA-CTTTCTT---C-AGAAAATCG----AGATTGGAATCTA-AAC--T-TTTA-GTAATATGGCATTGCATCTGCAGTGCTTCATGTAGATTGTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCAAGTTGGCCAAATGTCACTTAATTGATTATATAATGACCCAT
gi|10 : gtataatgccacttcaacagtttcagttataaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACATTTTGTTACAAAGAACGTGCCCGTCAGGAATCGAACCCTGAATTTCTGATTTGACAAGCATGTACGCTACCATTACGCTACCCTCGCGGGATCACATTCACAATTAGAAGTACAAGTTGGAAGAAG--GTACAATGCTATTTCATTC-----------------CCCTCCCCCACC-C-GACAGTATAACTGTGGAATAGTTTGGACTTCAGCAGCCAATTGTAT---------AAACGTCGGTTTAAT-TT-T-AACTCATGGTTATCTTTATCC----T--------------AAGTT--TT-AAAATAACTAATATTTAAATAC---CAG--ATATCATT---T-A-TA--TTAGTGTTTTTAACCTTTAGTCAAAGATAACCCAGGCCTGATT--AATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCATAAAg
gi|11 : tttaatgccacttcaacagttttcagttatataattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGACCGAGAACATTTTGTCACAAAGAACGTACCGGTCGGGAATCAAACCCGGGACCTCTGAACTGACAAGTATGTACGCTACCATTGCGCTACCCAGGTGGATTCGCATTTACAGCTAGAAGTACAAGTCGGAAATAG--GTAAAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAACCATTTGTAT---------AAACGTTGGTTTAAT-TT-T-AACTCTTTGTTATCTTTATCC----T--------------AAGTC--TT-AAAATAACTAAAA-TTAAATAC---CAG--ATATAA-TTTAT-A-TA--TAAGTG-TTTTAACCTTTAGTTAAAGATAACCCTGGCCT--TT----TAT-----ACATTTATACAAG-TTGTT
gi|12 : ggtcaggtatcctaacggttttccaggaattcaatactaaccgatctttgcagataactggcactttcccctattgaaacGTACAAGTCGGAA-------------GCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATAGTTTGGACTTCAGCAGCCAATTGTAT---------AAACGTTGGTTTAA--TT-TTAACTCATGGTTATCTTTATCC----T--------------AAGTC--TT-AAAATAACTAATATTTAAATAC---CAG--ATATCA-T---TGA-TA--TTAGTGTTTTTAACCTTTGGTTAAACATAACCCAGGTCTGATTAAAATATAACCAACATTTATACACG-TTGTTATTTC-GTCCTTAATCTTTGTGGGATTGTAGGTTTTTAGGTCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCATACTTGTCAGAAACCCTTG-------AGAAGACAATGTCACCTATAAAT-AAAAAAATGTGCC
gi|12 : -AAAAAATGTGCCAAGATGGGAATCTA-ATT--T-TTTTTGTAATCTGACATTGCATCTGCAGTGTCCCAaagatgggaatctaattttttttgtaatctgacattgcatctgcagtgtccca
gi|13 : gtacaagtcggaagctatttcatttccccccgactgtataactgtggaatagtttggacttcagcagccaattgtataaacgttggtttaattttaactcatggttatctttatcctaagtcttaaaataactaatatttaaataccagatatcattgatattagtgtttttaacctttggttaaacataacccaggtctgattaaaatataaccaacatttatacacgttgttatttcgtccttaatctttgtgggattgtaggtttttaggtcagagaaaaaaagtttaaattctcttccccatccatacttgtcagaaacccttgagaagacaatgtcacctataaataTAG--GCACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAGCCAGTTGTAT---------AAACGTTGGTTTAA--TT-TTAACTCTTTGTTATCTTTATCC----T--------------TAGTT--TG-AAAATAACATAAATTTAAATAC---CAG--ATATCATT---T-A-TA--TAAGTG-TTTTAACCTTTGGTTAAAGATAATCCAGGCCTTACTTAAATGTAATCAAATTTAATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTAGGATTGTAGGTTTTTAGGCCAGAA-A-AATAAA-GGTTTAAATTCAAATTCTCTTCCCCAT--ACACCTGTCCGAAACCCTTG-------AGAAGTCAA-------TATAAAT-AACAAAATGTGCCCGGC-CT-TCATGAGCTA--TTTCTTGTCC-AGAAAATCT----AGATAGGAATCTA-ATG--T-TTT--AT
gi|14 : ATGTACGCTACCTTTGCGCTACTCCGGCGGATTCGCATTCACAGTAGGAAGTACAATTCCGAAATAG--GTACAATGTTATTTCA------------------------------CC-C-GACTGCATAACTGTGGAATGGTTTGGACTTCAGCAGCAAATTGTAT---------AAACGTTGG-GTAAAGTT-T-AACTCTTGGTTATATTTATCC----T--------------AAATA--TT-AAAATAACTAAAATTTGAATAC---CAG--ATATCA-T---TTA-TA--TTA-TGGTTTTA-------------GATAACCCAGCCCTGATAAGAATATAATCAACGGTTATACCAG-TTATTCTTTCAGTCCTTAAACTTTGAGGAATTGTCGG-TTTTAGGGCAGAG-A-AA-AAA-G-------TTTA
gi|14 : gaTG-------GGAAGTCTATGTCACCTATTAATAAAAGAATTGTGCCC-GC-CCGTCCTGGGTTA-C-TTCTT---C-AGAAAATtgggaagtctatgtcacctattaataaaagaattgtgcccgcccgtcctgggttacttcttcagaaaataaag
gi|15 : gaatgtacgctacctttgcgctactccggcggattcgcattcacagtaggaagtacaattccgaaataggtacaatgttatttcacccgactgcataactgtggaatggtttggacttcagcagcaaattgtataaacgttgggtaaagtttaactcttggttatatttatcctaaatattaaaataactaaaatttgaataccagatatcatttatattatggttttagataacccagccctgataagaatataatcaacggttataccagttattctttcagtccttaaactttgaggaattgtcggttttagggcagagaaaaaagttta-TA--TTAGTGTTTTTTACCTTTGGTTAAAGATAACACAGGCCTGATTGAAATATAATCAACATTTATACAAG-TTGTTATTTC-GTCCTTAGATTTTGTGGGATTGTAGGTTTTTAGGCCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCTCGATTCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCAATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTATTTTTCTT---C-A-AAAATCT----AGATGGGAATCTATTTT--T-TTT--GCAATATAGCATTGCATCTGCAGTGTCCCATATCGATTTTAAGGGTTAAATATCTAGTTTGTGGTCATTTTAACTTTAAACAAGAGGTTCATGTTGGTCAAAGGTCACTTAATTGATTTTATAATGATCCATaaag
gi|16 : ATAGAAGTACAGTGCTATTTCATTT-----------------TA--------CC-C-GAGTGTATAGCTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTATCAATTGTATAAACGTTGACTGAA--TT-GGAACTCTTGGTTATCTATACCT----TGAGTCTTACAATTGAAATAACTT-AAAATAACTAAAATCTAAATAA---TAG--ATATCA-T---TTA-TA--TTAGTGTTTAAAACCTTTGAATAAATATAACCCAGGCCTGATTAAAATTTAATGAACGTTTATAAAAG-TTGTTCTTTCAGCCCTTAAAGTTTGTGg
gi|17 : gACTTTTTTTCACAAAGAACTTGCCCGTCGGGAATCGAACCTGGGACATCTGAATTGACAAGCATGTACGATACCATTGCGCTACACAGGCGAGTTCGCATTCAAAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTTC
gi|18 : gtttaatgtaacttcaacagttgtcagttatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAACTAAAATTTAAATACGATCGA--ATGTTA-----T-A-TA--T--GTGTTTTTGACCTTTGGTTAAAGATAACCTAGACCTGATTAAAATATAATCATCGTTCGTACAAGTTTGTTTTTTCAGTCCTTAAACATTGTAGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA------------AAAATCTCTTCCCCACCCACACCTGTCCGAAACCTTTG-------AAAAGTCAATGGCACCTATAAAT-AAAAAAGTGAGC---GC-CCGTACTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAt
gi|19 : G--ATATCA-T---TTA-TAAATTAGTGTTTTTAACCTTTGGGTAAAGATAACCCAGGCCTGATTAAAATATGATCACCGTTCAT-CAGG-TTGGTCTTTCAGTCCTTAAACTTTGTGGTATAATTTGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTTTCTTCCCAACCCACACCTGCCCG--ACCCTTG-------AGAAGGCAAAGTCACCTATA
gi|2 : TTTTGTCACAAAGAACGTGTCCGTCGGGAATCGAAACCGGAACCTCTTAATTGACAAGCATGTTCACTATCATTGCGCTACCCAGGCAGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAA-------------GCTATTTCATCCACCCCCCCCCCCCCCCCCC--------CCAC-GACTGTATAACTGTGTAATAGTTTGGACTTAAGCAGCCAATTGTAT---------AAACGTTGGTTTAA--TT-TTAATTCGTGGTTATCTTTATCC----T--------------CAATC--TT-AAAATAACTAATATTTAAATAC---CAG--ATATCA-T---TTA-TT--TTAGTGTTTTTAACCTTTGGTTAAAGACAACCCAGGCCTGATTAAAATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTGGGATGGTAGGTTTTTAGGCCAGAG-ACAA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACTTGTCCGAAGCCCTTG-------AGAAGACAATGTCACCTATAAAT-ATAAAAATGTGCACGGC-CT-CCCAGAGTTA-TTTTCTT---A-AAAAAATCT----AGATGGGAATCTA-AACT-T-TTT--GTAATATGGCATTGCATCTGCAGTATCCCAggaa
gi|20 : attaatgccacttcttcaacagttttcatttatataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAAGCGGAGAACATTCTGTCCCAAAGAACTTTCCCGTCGGGAATCGAACCCAGGACATATGAATTGACAAGCATGTACGCTGCCATTGCGCTACCCAAGCGGGTTTGCATTCACAGTAAGAAGTACAAGTCGGAAATTG--GTACAATGCTATT
gi|21 : acaactgacaacttcatcatttgaaacAGGCAAAGAACATTTTGTCACAACGAAATTTTCGGAACGGAATCGAATCCGAGGCCTCTGGATTAACAAGGCTGTATGCTACCACTGCGCTACCC
gi|22 : cagtactaacagatctttgcaagtaactaacatctattttccttacttgaaaccaACATTCTGTTATAAAGAACGTGCCCacagtcttcaacgtatagttag
gi|23 : ggtttaacgccatttcaacagttttcagttatatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTGAAACCCTTGCCCCCGGAGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAAAGTCT----AGTTGGGAATCTA-AACT-T-TTT--GTAATATGGCATTGCATCTGCAGTGTCCC
gi|24 : TTTGTCACAAAGAACGTGCGCGTCGGGAATCGACCCCGGTACATCTGAATTGATAAGCATGTACGCTACCGTTGCGCTACCCGGGCGGGTTCACATTCTCAGTAATAAGAACAAGTCGAAAGTAG--GTACAATGCTATTT
gi|25 : TTCGTCACAAAGAACGTACTCGTCGGGAATCGAACCCGGGCCATCTGAATTGACAAGCATGTACGCTACCATTGCGTTGCCCAGGCGGGTTCGCATTCACAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTT
gi|26 : CGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAC-AAAAAAATGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAACAGCT----AGATGGGAATTAA-AAC--TATTT--GTAATATGGCATTGCATCTGCAGTGTCCC
gi|27 : AAACCCTTG-------AGAAGTCAATGCCACCTATAAAT-AAAAAAATATGCCCGGC-CT-TCCTGAGT----TTTCTT---C-AAAAAATCT----AGATGGGAATCTA-AACT-T-TTT--GTAATATAGCATTGCATCTGCAGTGTCCCA
gi|28 : AGTCAATGGCACCTATAAATAAAAAA--TGTACCTGGCGTTCTTCTTATCTA-TTTTCTT---A-AAAAAATCG----AGATGGGAATCTA-AACTTT-TTT--GTAATTTGGCATTGCATCTGCAGTGTCCCA
gi|29 : AGAGGCGGAGGACATTTTGTCACAAATAACGTGCCCGTCGGGAATCGAACCCGGTACCTCTGAATTGACAAGCACGTACGCTACCACTGCGCTACC
gi|3 : AGAGACGGAAAACATTTTGTCACAAAGAACGTGCCCATCGGGAATCGAACCCGGGATTTCCGTATCAACAAGTACGTACGCTACCATTGCGCTACCCGGGCGGGTTTGCATTCACAGTTAGAAGTACAGGTCGGAAATAG--GTACCATGCTATTTCATAT-----------------CC--------CA-T-GATTGTATAACTGTGGAATGGTTTGGACTTCAGCAGCCAAGTGTAT---------AAACGTTGGTGTAA--TG-T-AACTTTTGGTCATCTTTATCC----T--------------AAATC--TT-AAAATAACTAAATTTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACTTTTGGGTAAAGCTAACCTAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGTATTGTTGTTTTTTAGGCCAAAA-A-AA-GAA-G-------TATAAATTCTCTT-CTCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCC-TC-CTGTCCTGAGTTA-CGTTCTT---C-AGAAAATCT----AGATGGGAATCTA-AAC--T-TTC--GTAACATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTCAAATATCTTGTTTATGGTGATCTTGACTTGAAACAAGAGGGCCATGTTGGCAAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|30 : TTGACTTTAAACAAGAGGTTCATGATGACCAAAGGTCGCTTACTTGATTATATAAGAATCCAT
gi|31 : attgttatatTGCATCTGCAGTGTCCCATGTAGATTTTAA---TTGATTATATAATg
gi|4 : ACATTTTGTCACAAAGAACCTGCCCGTCGGAAATCGAATCTGGGACCTCTCAATTGACAATCATGTACGCTACCATTGTGCTACCCAGGCGGGTTCGCATTCAAAGTTGGAGGTACAAGTCAGAAGTAG--GTACAATGCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTAT---------AAATGTTGGTTTAA--TT-TTAACTCTTGGTTATATTTAGTT----T--------------AAGTT--TT-AAAATAACTAATATTTAAATAC---CAG--ACATCA-T---T-AATA--TTAGTGTGTTTACCCTTTGGCTAAACATAACCCAGGCCTGATTAAAATATAACCAACACTTATACAAG-TTGTTATCTC-GTCCTTAAACTTTGTGAGAATGTAGGTTTTTAGGCCAGAG-A-AA-AAACG-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------GGAAGTCAATGTCACCTATAAATATAAAAA-TATGCCCGGC-CT---------------TCTT---C-AAAAAATCT----AGATGGGAATCTA-AAC--T-TTT--GTAATATGGCATTGCATCTGCAGT
gi|5 : ggtttaatgcctcttcaacagttttcagttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTTTGTCACAAAGAACGTGCCCATCGCAAATCGAATCCTGGATCTCCGGATTAACAAGCATGTACGCTACCATTGCGCTACCAGAGCGGGTTTGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTTATTT-----------------CC--------CA-C-GACTGTATTACTGTGGAATGGTTTAGACTTCAGCAGTCAATTGTAT---------AAACGTTGGTGTAA--TA-T-AACTCTTGGTCATCTT-ATCC----T--------------AAATC--TT-AAAATAACTAATATTTAAATAC---CAG--ATATCA-T---T-A-TA--TAAGTGTTTTTAACCTTTGGGTAAAGATAACCTATGCCTGATTAAAATATAATCAACGTTTATACAAG-TAGTTCTTTCAGTCCTTTAACTTTGTGGTATTGTTGGTTTTAAGGCCAAAG-A-AA-GAA-G-------TCTAAATTCTCTTCCCCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATTAATAAAAAAAATGTGCCC-TC-CCGTCCTGAGTCA-CGTTCTT---C-AGAAAATCT----AGATGGAAATCTA-AAC--T-TTC--GTAATATGGCATTGCATCTGCAGTGCCCCATATAGATTTCAAGGGTCAAATATCTAGTTTTTGGTGATCTTGACTTGAAACAAGAGGGACATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCATc
gi|6 : GAGCATTTTGTCACGAAGAACGTGCCCGTCGGGAGTCGAACCCGGAACCTCCGGATTGACAAGCATGTACGCCATCAGTACGCTACCCGGGCGAGTTCACATTAACAGTTAGAAGTACAAGTCGGAAATAG--GTACAGTGCTTTTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGAAATGGTTTGGACTTCAGCAGCCAATTGTAT---------AAAAGTT----TAA--TTCT-AACTATTGGCTATCTTTATTC----C--------------AAGTC--TT-AAAATAACTAAAAGCTAAATAC---CAG--ATATCATT---T-T-TA--TAAGTGTGTTTAACCTTTGGTTAAAGATAACTCAGTCCTGACCAAAATTTAATCAACG-TTATACAAG-TTGTTGTTTCAGTCCTGAAACTTTGTAGGATTGTTGGTTTTTAGGCCAGAG---AA-AAA-G-------TTAAAATTCTCTTCCCCACCCACACCTGTCTGAAACCCTTG-------AGAAGTCTATGTCACCTATAAATAAAAAAAACGTACCC-GC-CTGTCTTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATAGGAATATA-AACT-T-TTT--GTAATATGACATCGCAACTACAGTTCCCCATGTATATTTTAAGGGTTAAATATCTAGTTTGCGGTGATCTTGACTTTAAACAAGAAGGTCATGTTGGTCAAAGGTCGCTTAATTGATTATATg
gi|7 : C-C-AGCTGTATTACTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTAT---------AAACGTTGGTTTAA--TT-TTAACTCTTGCTTATCTTTATTTCTAGT--------------AAGTC--TT-TAAATAACTTTTATTTAAATAC---CAGGGATATCA-T---TTA-TA--TTAGTGTTTTTAATCATTGGTTAATGATAACCCAGGCCTGATTAAAATATAATCAGCGTTTATACAAA-TTGTTCTTTCAGTCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-G-AA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACCTGTCCGAAACACTTG-------AGAAGTCAATGTCACCTATAAAT--AAAAAATATGCCC-GC-CAGTCCTGTGTGA-CCCTCTT---C-AGAAAATCT----AGATGGGAATCTA-AACT-T-TTT--GTAATATGGCATTGCATCTGCAGTGCCCCATGTATATTTTAAGCGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGATGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGACCCAT
gi|8 : -GGCTGTATAACTGTGAAATGGTTTGGACTTCAGCAGCCAATTGTAT---------AAACATTGGT-TAA--TT-T-TATTCTTGCTTATCTTTATTTATAGT--------------AAGTC--TT-AAAATAACT-----TTAAATAC---CAG--ATGTCA-TA--T-A-TA--TTAGTGTTTTTAACCATTAGTTAAAGATAACCCAGGCCTGATTAAAATAAAATCAGCGTTTATACACG-CTGTTCTTTCAGTCCTT-----TTGTGGGATTGTTGTTATTTAGGCCAGAG-A-AA-AAA-G-------TTAAAATTCTCTTCCCCATCCACACCTGTCCGAAACACTTG-------GGAAGTCATTGTCACCTATAAAT--AAAACATGTGCCC-GC-CAGTCCTGTGTGA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTA-AACT-T-TTT--GTAATATGGCATTGCATCTGCAGTGCCCCATATATATTTTAAGCGTTTTATTTCTAGTTTGTGGTGATCTTGACTTTAACCTAGATGGTCATGTTGGCTAAAGGTAGCTTAATTGAGTATATAATGAg
gi|9 : TATAACTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTAT---------AAACATTGGTTTAA--TT-T-AACTCTTGGTTATCTTTATCT----T--------------AAGTC--TT-AAAATAACTAATATTTAAATAC---CAG--ATATCA-T---TTA-TA--TTAGTGTGTTTAACCTTTGGTTAAAGATAACCCAGGTGTAATTAAAATATAATCAACGTTTGTACAAG-TTGTTCATTCGGTCCTTAAACTTTGTGGGAATGTTGGGTTTTAGGCCAGAG-A-AA-AAC-G-------TTTAAATTCTCTTCTCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAGATGTGCCC-GC-CCGTCCTGTATTA-CTTTCTT---CAAAAAAATCT----AGATAGGAATCT-------T-TTT--GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAGTATCTAGTTTGTGGTGATCTTGACTTTAAACAATAGGGTGATGTTGACCAAAGGTCGCTTAATTGATTATATAATGATCCATctaatg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): GGTTTAACGCCATTTCAACAGTTTACAGTTACAT
Alignments
lowQualScore : 22222222222222222 11111111 111111111 1 1 1111 1111111111111111 1111111 1 1 1
lowQualScore : 1 2 33 33333333333333333 22222222 3 5 000000000 0 5 3 1111 7777777777777777 2 4 444 33 7777777 2 33 2 1 9 0 5 2 2 2 8888888 7777777 0 4 2 2 2 333 444 2 5555 22 2
lowQualScore : . . .. ................. ........ . . ......... . . . .... ................ . . ... .. ....... . .. . . . . . . . . ....... ....... . . . . . ... ... . .... .. .
lowQualScore : 2 5 44 33333333333333333 11111111 1 7 777777777 7 3 3 3333 7777777777777777 5 3 444 22 2222222 2 11 2 2 2 7 3 7 7 7 7777777 2222222 1 1 1 4 1 444 111 2 0000 77 7
consensus : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
Reference ( family-2376 ) : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|1 : ATTTTGTCACAAAAAAAGTACCCGTCGGGAATCGAATCCGGGACCTCAGAATTGACAAGCATGTACGCTGCCATTGTACTACCCGGGCAGGTTCACATTCACAGTTAAAAGTACAAGAAGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGTTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAATTT-T-AACTCTTGCTTATC-TTATAT----TAA---------------------AAAA-AAC-TAATATTAAAATAC---CGG--ATATCATT---T-A-TA--TTAATGTGTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAATTATAATCAGCGTTTATACAAG-TTGTTCTTTTAATCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-C-TT-AAC-G-------TTTAAATTCTCTTCCCCATCCACACCTGTTTGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAAATGTGCCT-GC-CAGTCCTGAATTA-CTTTCTT---C-AGAAAATCG----AGATTGGAATCTAAAC-TTTTA-GTAATATGGCATTGCATCTGCAGTGCTTCATGTAGATTGTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCAAGTTGGCCAAATGTCACTTAATTGATTATATAATGACCCAT
gi|10 : gtataatgccacttcaacagtttcagttataaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACATTTTGTTACAAAGAACGTGCCCGTCAGGAATCGAACCCTGAATTTCTGATTTGACAAGCATGTACGCTACCATTACGCTACCCTCGCGGGATCACATTCACAATTAGAAGTACAAGTTGGAAGAAG--GTACAATGCTATTTCATTC-----------------CCCTCCCCCACC-C-GACAGTATAACTGTGGAATAGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTCGGTTTAATTT-T-AACTCATGGTTATCTTTATCC----TAAGT----------------TTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCATT---T-A-TA--TTAGTGTTTTTAACCTTTAGTCAAAGATAACCCAGGCCTGATT--AATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCATAAAg
gi|11 : tttaatgccacttcaacagttttcagttatataattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGACCGAGAACATTTTGTCACAAAGAACGTACCGGTCGGGAATCAAACCCGGGACCTCTGAACTGACAAGTATGTACGCTACCATTGCGCTACCCAGGTGGATTCGCATTTACAGCTAGAAGTACAAGTCGGAAATAG--GTAAAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAAC---------CATTTGTATAAACGTTGGTTTAATTT-T-AACTCTTTGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAAAA-TTAAATAC---CAG--ATATAA-TTTAT-A-TA--TAAGTG-TTTTAACCTTTAGTTAAAGATAACCCTGGCCT--TT----TAT-----ACATTTATACAAG-TTGTT
gi|12 : ggtcaggtatcctaacggttttccaggaattcaatactaaccgatctttgcagataactggcactttcccctattgaaacGTACAAGTCGGAA-------------GCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATAGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAACTCATGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TGA-TA--TTAGTGTTTTTAACCTTTGGTTAAACATAACCCAGGTCTGATTAAAATATAACCAACATTTATACACG-TTGTTATTTC-GTCCTTAATCTTTGTGGGATTGTAGGTTTTTAGGTCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCATACTTGTCAGAAACCCTTG-------AGAAGACAATGTCACCTATAAAT-AAAAAAATGTGCC
gi|12 : -AAAAAATGTGCCAAGATGGGAATCTAATT-TTTTTTGTAATCTGACATTGCATCTGCAGTGTCCCAaagatgggaatctaattttttttgtaatctgacattgcatctgcagtgtccca
gi|13 : gtacaagtcggaagctatttcatttccccccgactgtataactgtggaatagtttggacttcagcagccaattgtataaacgttggtttaattttaactcatggttatctttatcctaagtcttaaaataactaatatttaaataccagatatcattgatattagtgtttttaacctttggttaaacataacccaggtctgattaaaatataaccaacatttatacacgttgttatttcgtccttaatctttgtgggattgtaggtttttaggtcagagaaaaaaagtttaaattctcttccccatccatacttgtcagaaacccttgagaagacaatgtcacctataaataTAG--GCACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAGC---------CAGTTGTATAAACGTTGGTTTAA-TT-TTAACTCTTTGTTATCTTTATCC----TTAGT----------------TTGAAAATAACATAA-ATTTAAATAC---CAG--ATATCATT---T-A-TA--TAAGTG-TTTTAACCTTTGGTTAAAGATAATCCAGGCCTTACTTAAATGTAATCAAATTTAATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTAGGATTGTAGGTTTTTAGGCCAGAA-A-AATAAA-GGTTTAAATTCAAATTCTCTTCCCCAT--ACACCTGTCCGAAACCCTTG-------AGAAGTCAA-------TATAAAT-AACAAAATGTGCCCGGC-CT-TCATGAGCTA--TTTCTTGTCC-AGAAAATCT----AGATAGGAATCTAATG-TTTT
gi|14 : ATGTACGCTACCTTTGCGCTACTCCGGCGGATTCGCATTCACAGTAGGAAGTACAATTCCGAAATAG--GTACAATGTTATTTCA------------------------------CC-C-GACTGCATAACTGTGGAATGGTTTGGACTTCAGCAGC---------AAATTGTATAAACGTTGGGTAAAGTT-T-AACTCTTGGTTATATTTATCC----TAAAT----------------ATTAAAATAAC-TAAAATTTGAATAC---CAG--ATATCA-T---TTA-TA--TTA-TGGTTTTA-------------GATAACCCAGCCCTGATAAGAATATAATCAACGGTTATACCAG-TTATTCTTTCAGTCCTTAAACTTTGAGGAATTGTCGG-TTTTAGGGCAGAG-A-AA-AAA-G-------TTTAat
gi|14 : gaTG-------GGAAGTCTATGTCACCTATTAATAAAAGAATTGTGCCC-GC-CCGTCCTGGGTTA-C-TTCTT---C-AGAAAATtgggaagtctatgtcacctattaataaaagaattgtgcccgcccgtcctgggttacttcttcagaaaataaag
gi|15 : gaatgtacgctacctttgcgctactccggcggattcgcattcacagtaggaagtacaattccgaaataggtacaatgttatttcacccgactgcataactgtggaatggtttggacttcagcagcaaattgtataaacgttgggtaaagtttaactcttggttatatttatcctaaatattaaaataactaaaatttgaataccagatatcatttatattatggttttagataacccagccctgataagaatataatcaacggttataccagttattctttcagtccttaaactttgaggaattgtcggttttagggcagagaaaaaagttta-TA--TTAGTGTTTTTTACCTTTGGTTAAAGATAACACAGGCCTGATTGAAATATAATCAACATTTATACAAG-TTGTTATTTC-GTCCTTAGATTTTGTGGGATTGTAGGTTTTTAGGCCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCTCGATTCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCAATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTATTTTTCTT---C-A-AAAATCT----AGATGGGAATCTATTT-TTTTT-GCAATATAGCATTGCATCTGCAGTGTCCCATATCGATTTTAAGGGTTAAATATCTAGTTTGTGGTCATTTTAACTTTAAACAAGAGGTTCATGTTGGTCAAAGGTCACTTAATTGATTTTATAATGATCCATaaag
gi|16 : ATAGAAGTACAGTGCTATTTCATTT-----------------TA--------CC-C-GAGTGTATAGCTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTATCAATTGTATAAACGTTGACTGAA-TTGG-AACTCTTGGTTATCTATACCT----TGAGTCTTACAATTGAAATAACTTAAAATAAC-TAAAATCTAAATAA---TAG--ATATCATT---T-A-TA--TTAGTGTTTAAAACCTTTGAATAAATATAACCCAGGCCTGATTAAAATTTAATGAACGTTTATAAAAG-TTGTTCTTTCAGCCCTTAAAGTTTGTGg
gi|17 : gACTTTTTTTCACAAAGAACTTGCCCGTCGGGAATCGAACCTGGGACATCTGAATTGACAAGCATGTACGATACCATTGCGCTACACAGGCGAGTTCGCATTCAAAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTTC
gi|18 : gtttaatgtaacttcaacagttgtcagttatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAAC-TAAAATTTAAATACGATCGA--ATGTTA-T-----A-TA--T--GTGTTTTTGACCTTTGGTTAAAGATAACCTAGACCTGATTAAAATATAATCATCGTTCGTACAAGTTTGTTTTTTCAGTCCTTAAACATTGTAGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA------------AAAATCTCTTCCCCACCCACACCTGTCCGAAACCTTTG-------AAAAGTCAATGGCACCTATAAAT-AAAAAAGTGAGC---GC-CCGTACTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAt
gi|19 : G--ATATCA-T---TTA-TAAATTAGTGTTTTTAACCTTTGGGTAAAGATAACCCAGGCCTGATTAAAATATGATCACCGTTCAT-CAGG-TTGGTCTTTCAGTCCTTAAACTTTGTGGTATAATTTGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTTTCTTCCCAACCCACACCTGCCCG--ACCCTTG-------AGAAGGCAAAGTCACCTATA
gi|2 : TTTTGTCACAAAGAACGTGTCCGTCGGGAATCGAAACCGGAACCTCTTAATTGACAAGCATGTTCACTATCATTGCGCTACCCAGGCAGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAA-------------GCTATTTCATCCACCCCCCCCCCCCCCCCCC--------CCAC-GACTGTATAACTGTGTAATAGTTTGGACTTAAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAATTCGTGGTTATCTTTATCC----TCAAT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TTA-TT--TTAGTGTTTTTAACCTTTGGTTAAAGACAACCCAGGCCTGATTAAAATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTGGGATGGTAGGTTTTTAGGCCAGAG-ACAA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACTTGTCCGAAGCCCTTG-------AGAAGACAATGTCACCTATAAAT-ATAAAAATGTGCACGGC-CT-CCCAGAGTTA-TTTTCTT---A-AAAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTATCCCAggaa
gi|20 : attaatgccacttcttcaacagttttcatttatataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAAGCGGAGAACATTCTGTCCCAAAGAACTTTCCCGTCGGGAATCGAACCCAGGACATATGAATTGACAAGCATGTACGCTGCCATTGCGCTACCCAAGCGGGTTTGCATTCACAGTAAGAAGTACAAGTCGGAAATTG--GTACAATGCTATT
gi|21 : acaactgacaacttcatcatttgaaacAGGCAAAGAACATTTTGTCACAACGAAATTTTCGGAACGGAATCGAATCCGAGGCCTCTGGATTAACAAGGCTGTATGCTACCACTGCGCTACCC
gi|22 : cagtactaacagatctttgcaagtaactaacatctattttccttacttgaaaccaACATTCTGTTATAAAGAACGTGCCCacagtcttcaacgtatagttag
gi|23 : ggtttaacgccatttcaacagttttcagttatatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTGAAACCCTTGCCCCCGGAGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAAAGTCT----AGTTGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGTCCC
gi|24 : TTTGTCACAAAGAACGTGCGCGTCGGGAATCGACCCCGGTACATCTGAATTGATAAGCATGTACGCTACCGTTGCGCTACCCGGGCGGGTTCACATTCTCAGTAATAAGAACAAGTCGAAAGTAG--GTACAATGCTATTT
gi|25 : TTCGTCACAAAGAACGTACTCGTCGGGAATCGAACCCGGGCCATCTGAATTGACAAGCATGTACGCTACCATTGCGTTGCCCAGGCGGGTTCGCATTCACAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTT
gi|26 : CGAAACCCTTG-------AGAAGTCAATGTCACCTATAAACAAAAAAA-TGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAACAGCT----AGATGGGAATTAAAAC-TATTT-GTAATATGGCATTGCATCTGCAGTGTCCC
gi|27 : AAACCCTTG-------AGAAGTCAATGCCACCTATAAATAAAAAAA-TATGCCCGGC-CT-TCCTGAGTT----TTCTT---C-AAAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATAGCATTGCATCTGCAGTGTCCCA
gi|28 : AGTCAATGGCACCTATAAATAAAAAA--TGTACCTGGCGTTCTTCTTATCTA-TTTTCTT---A-AAAAAATCG----AGATGGGAATCTAAACTTTTTT-GTAATTTGGCATTGCATCTGCAGTGTCCCA
gi|29 : AGAGGCGGAGGACATTTTGTCACAAATAACGTGCCCGTCGGGAATCGAACCCGGTACCTCTGAATTGACAAGCACGTACGCTACCACTGCGCTACC
gi|3 : AGAGACGGAAAACATTTTGTCACAAAGAACGTGCCCATCGGGAATCGAACCCGGGATTTCCGTATCAACAAGTACGTACGCTACCATTGCGCTACCCGGGCGGGTTTGCATTCACAGTTAGAAGTACAGGTCGGAAATAG--GTACCATGCTATTTCATAT-----------------CC--------CA-T-GATTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAAGTGTATAAACGTTGGTGTAA-TG-T-AACTTTTGGTCATCTTTATCC----TAAAT----------------CTTAAAATAAC-TAAATTTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACTTTTGGGTAAAGCTAACCTAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGTATTGTTGTTTTTTAGGCCAAAA-A-AA-GAA-G-------TATAAATTCTCTT-CTCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCC-TC-CTGTCCTGAGTTA-CGTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC--TTTC-GTAACATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTCAAATATCTTGTTTATGGTGATCTTGACTTGAAACAAGAGGGCCATGTTGGCAAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|30 : TTGACTTTAAACAAGAGGTTCATGATGACCAAAGGTCGCTTACTTGATTATATAAGAATCCAT
gi|31 : attgttatatTGCATCTGCAGTGTCCCATGTAGATTTTAA---TTGATTATATAATg
gi|4 : ACATTTTGTCACAAAGAACCTGCCCGTCGGAAATCGAATCTGGGACCTCTCAATTGACAATCATGTACGCTACCATTGTGCTACCCAGGCGGGTTCGCATTCAAAGTTGGAGGTACAAGTCAGAAGTAG--GTACAATGCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAATGTTGGTTTAA-TT-TTAACTCTTGGTTATATTTAGTT----TAAGT----------------TTTAAAATAAC-TAATATTTAAATAC---CAG--ACATCA-T---T-AATA--TTAGTGTGTTTACCCTTTGGCTAAACATAACCCAGGCCTGATTAAAATATAACCAACACTTATACAAG-TTGTTATCTC-GTCCTTAAACTTTGTGAGAATGTAGGTTTTTAGGCCAGAG-A-AA-AAACG-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------GGAAGTCAATGTCACCTATAAATATAAAAA-TATGCCCGGC-CT---------------TCTT---C-AAAAAATCT----AGATGGGAATCTAAAC--TTTT-GTAATATGGCATTGCATCTGCAGT
gi|5 : ggtttaatgcctcttcaacagttttcagttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTTTGTCACAAAGAACGTGCCCATCGCAAATCGAATCCTGGATCTCCGGATTAACAAGCATGTACGCTACCATTGCGCTACCAGAGCGGGTTTGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTTATTT-----------------CC--------CA-C-GACTGTATTACTGTGGAATGGTTTAGACTTCAGCAGT---------CAATTGTATAAACGTTGGTGTAA-TA-T-AACTCTTGGTCATCTT-ATCC----TAAAT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---T-A-TA--TAAGTGTTTTTAACCTTTGGGTAAAGATAACCTATGCCTGATTAAAATATAATCAACGTTTATACAAG-TAGTTCTTTCAGTCCTTTAACTTTGTGGTATTGTTGGTTTTAAGGCCAAAG-A-AA-GAA-G-------TCTAAATTCTCTTCCCCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATTAATAAAAAAAATGTGCCC-TC-CCGTCCTGAGTCA-CGTTCTT---C-AGAAAATCT----AGATGGAAATCTAAAC--TTTC-GTAATATGGCATTGCATCTGCAGTGCCCCATATAGATTTCAAGGGTCAAATATCTAGTTTTTGGTGATCTTGACTTGAAACAAGAGGGACATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCATc
gi|6 : GAGCATTTTGTCACGAAGAACGTGCCCGTCGGGAGTCGAACCCGGAACCTCCGGATTGACAAGCATGTACGCCATCAGTACGCTACCCGGGCGAGTTCACATTAACAGTTAGAAGTACAAGTCGGAAATAG--GTACAGTGCTTTTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGAAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAA----AGTTTAA-TTCT-AACTATTGGCTATCTTTATTC----CAAGT----------------CTTAAAATAAC-TAAAAGCTAAATAC---CAG--ATATCATT---T-T-TA--TAAGTGTGTTTAACCTTTGGTTAAAGATAACTCAGTCCTGACCAAAATTTAATCAACG-TTATACAAG-TTGTTGTTTCAGTCCTGAAACTTTGTAGGATTGTTGGTTTTTAGGCCAGAG---AA-AAA-G-------TTAAAATTCTCTTCCCCACCCACACCTGTCTGAAACCCTTG-------AGAAGTCTATGTCACCTATAAATAAAAAAAACGTACCC-GC-CTGTCTTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATAGGAATATAAAC-TTTTT-GTAATATGACATCGCAACTACAGTTCCCCATGTATATTTTAAGGGTTAAATATCTAGTTTGCGGTGATCTTGACTTTAAACAAGAAGGTCATGTTGGTCAAAGGTCGCTTAATTGATTATATg
gi|7 : C-C-AGCTGTATTACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAACTCTTGCTTATCTTTATTTCTAGTAAGT----------------CTTTAAATAAC-TTTTATTTAAATAC---CAGGGATATCA-T---TTA-TA--TTAGTGTTTTTAATCATTGGTTAATGATAACCCAGGCCTGATTAAAATATAATCAGCGTTTATACAAA-TTGTTCTTTCAGTCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-G-AA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACCTGTCCGAAACACTTG-------AGAAGTCAATGTCACCTATAAAT--AAAAAATATGCCC-GC-CAGTCCTGTGTGA-CCCTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTATATTTTAAGCGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGATGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGACCCAT
gi|8 : -GGCTGTATAACTGTGAAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACATTGGTT-AA-TT-T-TATTCTTGCTTATCTTTATTTATAGTAAGT----------------CTTAAAATAAC-T-----TTAAATAC---CAG--ATGTCA-TA--T-A-TA--TTAGTGTTTTTAACCATTAGTTAAAGATAACCCAGGCCTGATTAAAATAAAATCAGCGTTTATACACG-CTGTTCTTTCAGTCCTT-----TTGTGGGATTGTTGTTATTTAGGCCAGAG-A-AA-AAA-G-------TTAAAATTCTCTTCCCCATCCACACCTGTCCGAAACACTTG-------GGAAGTCATTGTCACCTATAAATAAAACA--TGTGCCCG-C-CAGTCCTGTGTGA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATATATATTTTAAGCGTTTTATTTCTAGTTTGTGGTGATCTTGACTTTAACCTAGATGGTCATGTTGGCTAAAGGTAGCTTAATTGAGTATATAATGAg
gi|9 : TATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACATTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCT----TAAGT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TTA-TA--TTAGTGTGTTTAACCTTTGGTTAAAGATAACCCAGGTGTAATTAAAATATAATCAACGTTTGTACAAG-TTGTTCATTCGGTCCTTAAACTTTGTGGGAATGTTGGGTTTTAGGCCAGAG-A-AA-AAC-G-------TTTAAATTCTCTTCTCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAGATGTGCCC-GC-CCGTCCTGTATTA-CTTTCTT---CAAAAAAATCT----AGATAGGAAT-----C-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAGTATCTAGTTTGTGGTGATCTTGACTTTAAACAATAGGGTGATGTTGACCAAAGGTCGCTTAATTGATTATATAATGATCCATctaatg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): GGTTTAACGCCATTTCAACAGTTTACAGTTACAT
Alignments
lowQualScore : 22222222222222222 11111111 111111111 1 1 1111 1111111111111111 1111111 1 1 1
lowQualScore : 1 2 33 33333333333333333 22222222 3 5 000000000 0 5 3 1111 7777777777777777 2 4 444 33 7777777 2 33 2 1 9 0 5 2 2 2 8888888 7777777 0 4 2 2 2 333 444 2 5555 22 2
lowQualScore : . . .. ................. ........ . . ......... . . . .... ................ . . ... .. ....... . .. . . . . . . . . ....... ....... . . . . . ... ... . .... .. .
lowQualScore : 2 5 44 33333333333333333 11111111 1 7 777777777 7 3 3 3333 7777777777777777 5 3 444 22 2222222 2 11 2 2 2 7 3 7 7 7 7777777 2222222 1 1 1 4 1 444 111 2 0000 77 7
consensus : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
Reference ( family-2376 ) : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|1 : ATTTTGTCACAAAAAAAGTACCCGTCGGGAATCGAATCCGGGACCTCAGAATTGACAAGCATGTACGCTGCCATTGTACTACCCGGGCAGGTTCACATTCACAGTTAAAAGTACAAGAAGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGTTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAATTT-T-AACTCTTGCTTATC-TTATAT----TAA---------------------AAAA-AAC-TAATATTAAAATAC---CGG--ATATCATT---T-A-TA--TTAATGTGTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAATTATAATCAGCGTTTATACAAG-TTGTTCTTTTAATCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-C-TT-AAC-G-------TTTAAATTCTCTTCCCCATCCACACCTGTTTGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAAATGTGCCT-GC-CAGTCCTGAATTA-CTTTCTT---C-AGAAAATCG----AGATTGGAATCTAAAC-TTTTA-GTAATATGGCATTGCATCTGCAGTGCTTCATGTAGATTGTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCAAGTTGGCCAAATGTCACTTAATTGATTATATAATGACCCAT
gi|10 : gtataatgccacttcaacagtttcagttataaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACATTTTGTTACAAAGAACGTGCCCGTCAGGAATCGAACCCTGAATTTCTGATTTGACAAGCATGTACGCTACCATTACGCTACCCTCGCGGGATCACATTCACAATTAGAAGTACAAGTTGGAAGAAG--GTACAATGCTATTTCATTC-----------------CCCTCCCCCACC-C-GACAGTATAACTGTGGAATAGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTCGGTTTAATTT-T-AACTCATGGTTATCTTTATCC----TAAGT----------------TTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCATT---T-A-TA--TTAGTGTTTTTAACCTTTAGTCAAAGATAACCCAGGCCTGATT--AATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCATAAAg
gi|11 : tttaatgccacttcaacagttttcagttatataattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGACCGAGAACATTTTGTCACAAAGAACGTACCGGTCGGGAATCAAACCCGGGACCTCTGAACTGACAAGTATGTACGCTACCATTGCGCTACCCAGGTGGATTCGCATTTACAGCTAGAAGTACAAGTCGGAAATAG--GTAAAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAAC---------CATTTGTATAAACGTTGGTTTAATTT-T-AACTCTTTGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAAAA-TTAAATAC---CAG--ATATAA-TTTAT-A-TA--TAAGTG-TTTTAACCTTTAGTTAAAGATAACCCTGGCCT--TT----TAT-----ACATTTATACAAG-TTGTT
gi|12 : ggtcaggtatcctaacggttttccaggaattcaatactaaccgatctttgcagataactggcactttcccctattgaaacGTACAAGTCGGAA-------------GCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATAGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAACTCATGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TGA-TA--TTAGTGTTTTTAACCTTTGGTTAAACATAACCCAGGTCTGATTAAAATATAACCAACATTTATACACG-TTGTTATTTC-GTCCTTAATCTTTGTGGGATTGTAGGTTTTTAGGTCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCATACTTGTCAGAAACCCTTG-------AGAAGACAATGTCACCTATAAAT-AAAAAAATGTGCC
gi|12 : -AAAAAATGTGCCAAGATGGGAATCTAATT-TTTTTTGTAATCTGACATTGCATCTGCAGTGTCCCAaagatgggaatctaattttttttgtaatctgacattgcatctgcagtgtccca
gi|13 : gtacaagtcggaagctatttcatttccccccgactgtataactgtggaatagtttggacttcagcagccaattgtataaacgttggtttaattttaactcatggttatctttatcctaagtcttaaaataactaatatttaaataccagatatcattgatattagtgtttttaacctttggttaaacataacccaggtctgattaaaatataaccaacatttatacacgttgttatttcgtccttaatctttgtgggattgtaggtttttaggtcagagaaaaaaagtttaaattctcttccccatccatacttgtcagaaacccttgagaagacaatgtcacctataaataTAG--GCACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAGC---------CAGTTGTATAAACGTTGGTTTAA-TT-TTAACTCTTTGTTATCTTTATCC----TTAGT----------------TTGAAAATAACATAA-ATTTAAATAC---CAG--ATATCATT---T-A-TA--TAAGTG-TTTTAACCTTTGGTTAAAGATAATCCAGGCCTTACTTAAATGTAATCAAATTTAATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTAGGATTGTAGGTTTTTAGGCCAGAA-A-AATAAA-GGTTTAAATTCAAATTCTCTTCCCCAT--ACACCTGTCCGAAACCCTTG-------AGAAGTCAA-------TATAAAT-AACAAAATGTGCCCGGC-CT-TCATGAGCTA--TTTCTTGTCC-AGAAAATCT----AGATAGGAATCTAATG-TTTT
gi|14 : ATGTACGCTACCTTTGCGCTACTCCGGCGGATTCGCATTCACAGTAGGAAGTACAATTCCGAAATAG--GTACAATGTTATTTCA------------------------------CC-C-GACTGCATAACTGTGGAATGGTTTGGACTTCAGCAGC---------AAATTGTATAAACGTTGGGTAAAGTT-T-AACTCTTGGTTATATTTATCC----TAAAT----------------ATTAAAATAAC-TAAAATTTGAATAC---CAG--ATATCA-T---TTA-TA--TTA-TGGTTTTA-------------GATAACCCAGCCCTGATAAGAATATAATCAACGGTTATACCAG-TTATTCTTTCAGTCCTTAAACTTTGAGGAATTGTCGG-TTTTAGGGCAGAG-A-AA-AAA-G-------TTTAat
gi|14 : gaTG-------GGAAGTCTATGTCACCTATTAATAAAAGAATTGTGCCC-GC-CCGTCCTGGGTTA-C-TTCTT---C-AGAAAATtgggaagtctatgtcacctattaataaaagaattgtgcccgcccgtcctgggttacttcttcagaaaataaag
gi|15 : gaatgtacgctacctttgcgctactccggcggattcgcattcacagtaggaagtacaattccgaaataggtacaatgttatttcacccgactgcataactgtggaatggtttggacttcagcagcaaattgtataaacgttgggtaaagtttaactcttggttatatttatcctaaatattaaaataactaaaatttgaataccagatatcatttatattatggttttagataacccagccctgataagaatataatcaacggttataccagttattctttcagtccttaaactttgaggaattgtcggttttagggcagagaaaaaagttta-TA--TTAGTGTTTTTTACCTTTGGTTAAAGATAACACAGGCCTGATTGAAATATAATCAACATTTATACAAG-TTGTTATTTC-GTCCTTAGATTTTGTGGGATTGTAGGTTTTTAGGCCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCTCGATTCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCAATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTATTTTTCTT---C-A-AAAATCT----AGATGGGAATCTATTT-TTTTT-GCAATATAGCATTGCATCTGCAGTGTCCCATATCGATTTTAAGGGTTAAATATCTAGTTTGTGGTCATTTTAACTTTAAACAAGAGGTTCATGTTGGTCAAAGGTCACTTAATTGATTTTATAATGATCCATaaag
gi|16 : ATAGAAGTACAGTGCTATTTCATTT-----------------TA--------CC-C-GAGTGTATAGCTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTATCAATTGTATAAACGTTGACTGAA-TTGG-AACTCTTGGTTATCTATACCT----TGAGTCTTACAATTGAAATAACTTAAAATAAC-TAAAATCTAAATAA---TAG--ATATCATT---T-A-TA--TTAGTGTTTAAAACCTTTGAATAAATATAACCCAGGCCTGATTAAAATTTAATGAACGTTTATAAAAG-TTGTTCTTTCAGCCCTTAAAGTTTGTGg
gi|17 : gACTTTTTTTCACAAAGAACTTGCCCGTCGGGAATCGAACCTGGGACATCTGAATTGACAAGCATGTACGATACCATTGCGCTACACAGGCGAGTTCGCATTCAAAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTTC
gi|18 : gtttaatgtaacttcaacagttgtcagttatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAAC-TAAAATTTAAATACGATCGA--ATGTTA-T-----A-TA--T--GTGTTTTTGACCTTTGGTTAAAGATAACCTAGACCTGATTAAAATATAATCATCGTTCGTACAAGTTTGTTTTTTCAGTCCTTAAACATTGTAGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA------------AAAATCTCTTCCCCACCCACACCTGTCCGAAACCTTTG-------AAAAGTCAATGGCACCTATAAAT-AAAAAAGTGAGC---GC-CCGTACTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAt
gi|19 : G--ATATCA-T---TTA-TAAATTAGTGTTTTTAACCTTTGGGTAAAGATAACCCAGGCCTGATTAAAATATGATCACCGTTCAT-CAGG-TTGGTCTTTCAGTCCTTAAACTTTGTGGTATAATTTGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTTTCTTCCCAACCCACACCTGCCCG--ACCCTTG-------AGAAGGCAAAGTCACCTATA
gi|2 : TTTTGTCACAAAGAACGTGTCCGTCGGGAATCGAAACCGGAACCTCTTAATTGACAAGCATGTTCACTATCATTGCGCTACCCAGGCAGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAA-------------GCTATTTCATCCACCCCCCCCCCCCCCCCCC--------CCAC-GACTGTATAACTGTGTAATAGTTTGGACTTAAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAATTCGTGGTTATCTTTATCC----TCAAT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TTA-TT--TTAGTGTTTTTAACCTTTGGTTAAAGACAACCCAGGCCTGATTAAAATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTGGGATGGTAGGTTTTTAGGCCAGAG-ACAA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACTTGTCCGAAGCCCTTG-------AGAAGACAATGTCACCTATAAAT-ATAAAAATGTGCACGGC-CT-CCCAGAGTTA-TTTTCTT---A-AAAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTATCCCAggaa
gi|20 : attaatgccacttcttcaacagttttcatttatataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAAGCGGAGAACATTCTGTCCCAAAGAACTTTCCCGTCGGGAATCGAACCCAGGACATATGAATTGACAAGCATGTACGCTGCCATTGCGCTACCCAAGCGGGTTTGCATTCACAGTAAGAAGTACAAGTCGGAAATTG--GTACAATGCTATT
gi|21 : acaactgacaacttcatcatttgaaacAGGCAAAGAACATTTTGTCACAACGAAATTTTCGGAACGGAATCGAATCCGAGGCCTCTGGATTAACAAGGCTGTATGCTACCACTGCGCTACCC
gi|22 : cagtactaacagatctttgcaagtaactaacatctattttccttacttgaaaccaACATTCTGTTATAAAGAACGTGCCCacagtcttcaacgtatagttag
gi|23 : ggtttaacgccatttcaacagttttcagttatatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTGAAACCCTTGCCCCCGGAGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAAAGTCT----AGTTGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGTCCC
gi|24 : TTTGTCACAAAGAACGTGCGCGTCGGGAATCGACCCCGGTACATCTGAATTGATAAGCATGTACGCTACCGTTGCGCTACCCGGGCGGGTTCACATTCTCAGTAATAAGAACAAGTCGAAAGTAG--GTACAATGCTATTT
gi|25 : TTCGTCACAAAGAACGTACTCGTCGGGAATCGAACCCGGGCCATCTGAATTGACAAGCATGTACGCTACCATTGCGTTGCCCAGGCGGGTTCGCATTCACAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTT
gi|26 : CGAAACCCTTG-------AGAAGTCAATGTCACCTATAAACAAAAAAA-TGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAACAGCT----AGATGGGAATTAAAAC-TATTT-GTAATATGGCATTGCATCTGCAGTGTCCC
gi|27 : AAACCCTTG-------AGAAGTCAATGCCACCTATAAATAAAAAAA-TATGCCCGGC-CT-TCCTGAGTT----TTCTT---C-AAAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATAGCATTGCATCTGCAGTGTCCCA
gi|28 : AGTCAATGGCACCTATAAATAAAAAA--TGTACCTGGCGTTCTTCTTATCTA-TTTTCTT---A-AAAAAATCG----AGATGGGAATCTAAACTTTTTT-GTAATTTGGCATTGCATCTGCAGTGTCCCA
gi|29 : AGAGGCGGAGGACATTTTGTCACAAATAACGTGCCCGTCGGGAATCGAACCCGGTACCTCTGAATTGACAAGCACGTACGCTACCACTGCGCTACC
gi|3 : AGAGACGGAAAACATTTTGTCACAAAGAACGTGCCCATCGGGAATCGAACCCGGGATTTCCGTATCAACAAGTACGTACGCTACCATTGCGCTACCCGGGCGGGTTTGCATTCACAGTTAGAAGTACAGGTCGGAAATAG--GTACCATGCTATTTCATAT-----------------CC--------CA-T-GATTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAAGTGTATAAACGTTGGTGTAA-TG-T-AACTTTTGGTCATCTTTATCC----TAAAT----------------CTTAAAATAAC-TAAATTTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACTTTTGGGTAAAGCTAACCTAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGTATTGTTGTTTTTTAGGCCAAAA-A-AA-GAA-G-------TATAAATTCTCTT-CTCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCC-TC-CTGTCCTGAGTTA-CGTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC--TTTC-GTAACATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTCAAATATCTTGTTTATGGTGATCTTGACTTGAAACAAGAGGGCCATGTTGGCAAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|30 : TTGACTTTAAACAAGAGGTTCATGATGACCAAAGGTCGCTTACTTGATTATATAAGAATCCAT
gi|31 : attgttatatTGCATCTGCAGTGTCCCATGTAGATTTTAA---TTGATTATATAATg
gi|4 : ACATTTTGTCACAAAGAACCTGCCCGTCGGAAATCGAATCTGGGACCTCTCAATTGACAATCATGTACGCTACCATTGTGCTACCCAGGCGGGTTCGCATTCAAAGTTGGAGGTACAAGTCAGAAGTAG--GTACAATGCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAATGTTGGTTTAA-TT-TTAACTCTTGGTTATATTTAGTT----TAAGT----------------TTTAAAATAAC-TAATATTTAAATAC---CAG--ACATCA-T---T-AATA--TTAGTGTGTTTACCCTTTGGCTAAACATAACCCAGGCCTGATTAAAATATAACCAACACTTATACAAG-TTGTTATCTC-GTCCTTAAACTTTGTGAGAATGTAGGTTTTTAGGCCAGAG-A-AA-AAACG-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------GGAAGTCAATGTCACCTATAAATATAAAAA-TATGCCCGGC-CT---------------TCTT---C-AAAAAATCT----AGATGGGAATCTAAAC--TTTT-GTAATATGGCATTGCATCTGCAGT
gi|5 : ggtttaatgcctcttcaacagttttcagttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTTTGTCACAAAGAACGTGCCCATCGCAAATCGAATCCTGGATCTCCGGATTAACAAGCATGTACGCTACCATTGCGCTACCAGAGCGGGTTTGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTTATTT-----------------CC--------CA-C-GACTGTATTACTGTGGAATGGTTTAGACTTCAGCAGT---------CAATTGTATAAACGTTGGTGTAA-TA-T-AACTCTTGGTCATCTT-ATCC----TAAAT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---T-A-TA--TAAGTGTTTTTAACCTTTGGGTAAAGATAACCTATGCCTGATTAAAATATAATCAACGTTTATACAAG-TAGTTCTTTCAGTCCTTTAACTTTGTGGTATTGTTGGTTTTAAGGCCAAAG-A-AA-GAA-G-------TCTAAATTCTCTTCCCCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATTAATAAAAAAAATGTGCCC-TC-CCGTCCTGAGTCA-CGTTCTT---C-AGAAAATCT----AGATGGAAATCTAAAC--TTTC-GTAATATGGCATTGCATCTGCAGTGCCCCATATAGATTTCAAGGGTCAAATATCTAGTTTTTGGTGATCTTGACTTGAAACAAGAGGGACATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCATc
gi|6 : GAGCATTTTGTCACGAAGAACGTGCCCGTCGGGAGTCGAACCCGGAACCTCCGGATTGACAAGCATGTACGCCATCAGTACGCTACCCGGGCGAGTTCACATTAACAGTTAGAAGTACAAGTCGGAAATAG--GTACAGTGCTTTTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGAAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAA----AGTTTAA-TTCT-AACTATTGGCTATCTTTATTC----CAAGT----------------CTTAAAATAAC-TAAAAGCTAAATAC---CAG--ATATCATT---T-T-TA--TAAGTGTGTTTAACCTTTGGTTAAAGATAACTCAGTCCTGACCAAAATTTAATCAACG-TTATACAAG-TTGTTGTTTCAGTCCTGAAACTTTGTAGGATTGTTGGTTTTTAGGCCAGAG---AA-AAA-G-------TTAAAATTCTCTTCCCCACCCACACCTGTCTGAAACCCTTG-------AGAAGTCTATGTCACCTATAAATAAAAAAAACGTACCC-GC-CTGTCTTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATAGGAATATAAAC-TTTTT-GTAATATGACATCGCAACTACAGTTCCCCATGTATATTTTAAGGGTTAAATATCTAGTTTGCGGTGATCTTGACTTTAAACAAGAAGGTCATGTTGGTCAAAGGTCGCTTAATTGATTATATg
gi|7 : C-C-AGCTGTATTACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAACTCTTGCTTATCTTTATTTCTAGTAAGT----------------CTTTAAATAAC-TTTTATTTAAATAC---CAGGGATATCA-T---TTA-TA--TTAGTGTTTTTAATCATTGGTTAATGATAACCCAGGCCTGATTAAAATATAATCAGCGTTTATACAAA-TTGTTCTTTCAGTCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-G-AA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACCTGTCCGAAACACTTG-------AGAAGTCAATGTCACCTATAAAT--AAAAAATATGCCC-GC-CAGTCCTGTGTGA-CCCTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTATATTTTAAGCGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGATGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGACCCAT
gi|8 : -GGCTGTATAACTGTGAAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACATTGGTT-AA-TT-T-TATTCTTGCTTATCTTTATTTATAGTAAGT----------------CTTAAAATAAC-T-----TTAAATAC---CAG--ATGTCA-TA--T-A-TA--TTAGTGTTTTTAACCATTAGTTAAAGATAACCCAGGCCTGATTAAAATAAAATCAGCGTTTATACACG-CTGTTCTTTCAGTCCTT-----TTGTGGGATTGTTGTTATTTAGGCCAGAG-A-AA-AAA-G-------TTAAAATTCTCTTCCCCATCCACACCTGTCCGAAACACTTG-------GGAAGTCATTGTCACCTATAAATAAAACA--TGTGCCCG-C-CAGTCCTGTGTGA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATATATATTTTAAGCGTTTTATTTCTAGTTTGTGGTGATCTTGACTTTAACCTAGATGGTCATGTTGGCTAAAGGTAGCTTAATTGAGTATATAATGAg
gi|9 : TATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACATTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCT----TAAGT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TTA-TA--TTAGTGTGTTTAACCTTTGGTTAAAGATAACCCAGGTGTAATTAAAATATAATCAACGTTTGTACAAG-TTGTTCATTCGGTCCTTAAACTTTGTGGGAATGTTGGGTTTTAGGCCAGAG-A-AA-AAC-G-------TTTAAATTCTCTTCTCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAGATGTGCCC-GC-CCGTCCTGTATTA-CTTTCTT---CAAAAAAATCT----AGATAGGAAT-----C-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAGTATCTAGTTTGTGGTGATCTTGACTTTAAACAATAGGGTGATGTTGACCAAAGGTCGCTTAATTGATTATATAATGATCCATctaatg
blockSeqs : T G AA ACCCCCCCCCCCCCCCC CTCCCCCA A C CAATTGTAT T G T CTAG CTTACAATTGAAATAA A T GAT GG TTTAT A AA T A A A C T C GTTTAAA CCCCCGG A A G G G TTT GTC A GCCA TT T
blockSeqs : A A . . . . C . T C T ATAG . . A . . TTT . . . A A A . . . . . A A G . G CT . . . T .
blockSeqs : C A . . . . . . G . T . . . T . . TTG . . . A A . . . . . . A T G . C TT . . . T .
blockSeqs : A A . . . . . . . . T . . . A . . TTT . . . C A . . . . . . A A G . G TT . . . T .
blockSeqs : A G . . . . . . . . T . . . A . . TTT . . . A A . . . . . . A G G . G TT . . . T .
blockSeqs : A A . . . . . . . . . . . . A . . TTT . . . C A . . . . . . A A G . G TT . . . T .
blockSeqs : G G . . . . . . . . . . . . T . . TTT . . . T A . . . . . . A A G . G CG . . . T .
blockSeqs : A G . . . . . . . . . . . . A . . TTT . . . C A . . . . . . A A G . G CG . . . T .
blockSeqs : G A . . . . . . . . . . . . T . . TTT . . . A A . . . . . . A A G . G CT . . . T .
blockSeqs : A G . . . . . . . . . . . . T . . TTT . . . C G . . . . . . A A . . . CC . . . T .
blockSeqs : G A . . . . . . . . . . . . A . . TAT . . . A . . . . . . . A A . . . CT . . . T .
blockSeqs : G A . . . . . . . . . . T . . TTT . . . C . . . . . . . . A . . . CT . . . T .
blockSeqs : . . . . . . . . . . T . . TT . . . G . . . . . . . . . . . . T . . . . .
blockSeqs : . . . . . . . . . . . . TT . . . C . . . . . . . . . . . . C . . . . .
blockSeqs : . . . . . TT . . . C . . . . . . . . . . . .
blockSeqs : . T . . . C . . . . . . . . . . .
blockSeqs : . . . . . . .
blockSeqCons :
originalCons : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
finalCons : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): GGTTTAACGCCATTTCAACAGTTTACAGTTACAT
Alignments
lowQualScore : 22222222222222222 11111111 111111111 1 1 1111 1111111111111111 1111111 1 1 1
lowQualScore : 1 2 33 33333333333333333 22222222 3 5 000000000 0 5 3 1111 7777777777777777 2 4 444 33 7777777 2 33 2 1 9 0 5 2 2 2 8888888 7777777 0 4 2 2 2 333 444 2 5555 22 2
lowQualScore : . . .. ................. ........ . . ......... . . . .... ................ . . ... .. ....... . .. . . . . . . . . ....... ....... . . . . . ... ... . .... .. .
lowQualScore : 2 5 44 33333333333333333 11111111 1 7 777777777 7 3 3 3333 7777777777777777 5 3 444 22 2222222 2 11 2 2 2 7 3 7 7 7 7777777 2222222 1 1 1 4 1 444 111 2 0000 77 7
consensus : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
Reference ( family-2376 ) : AGAGGCGGAGAACATTTTGTCACAAAGAACGTGCCCGTCGGGAATCGAACCCGGGACCTCTGAATTGACAAGCATGTACGCTACCATTGCGCTACCCGGGCGGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAANATTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CTGTCCTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|1 : ATTTTGTCACAAAAAAAGTACCCGTCGGGAATCGAATCCGGGACCTCAGAATTGACAAGCATGTACGCTGCCATTGTACTACCCGGGCAGGTTCACATTCACAGTTAAAAGTACAAGAAGGAAATAG--GTACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATGTTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAATTT-T-AACTCTTGCTTATC-TTATAT----TAA---------------------AAAA-AAC-TAATATTAAAATAC---CGG--ATATCATT---T-A-TA--TTAATGTGTTTAACCTTTGGTTAAAGATAACCCAGGCCTGATTAAATTATAATCAGCGTTTATACAAG-TTGTTCTTTTAATCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-C-TT-AAC-G-------TTTAAATTCTCTTCCCCATCCACACCTGTTTGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAAATGTGCCT-GC-CAGTCCTGAATTA-CTTTCTT---C-AGAAAATCG----AGATTGGAATCTAAAC-TTTTA-GTAATATGGCATTGCATCTGCAGTGCTTCATGTAGATTGTAAGGGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGAGGGTCAAGTTGGCCAAATGTCACTTAATTGATTATATAATGACCCAT
gi|10 : gtataatgccacttcaacagtttcagttataaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACATTTTGTTACAAAGAACGTGCCCGTCAGGAATCGAACCCTGAATTTCTGATTTGACAAGCATGTACGCTACCATTACGCTACCCTCGCGGGATCACATTCACAATTAGAAGTACAAGTTGGAAGAAG--GTACAATGCTATTTCATTC-----------------CCCTCCCCCACC-C-GACAGTATAACTGTGGAATAGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTCGGTTTAATTT-T-AACTCATGGTTATCTTTATCC----TAAGT----------------TTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCATT---T-A-TA--TTAGTGTTTTTAACCTTTAGTCAAAGATAACCCAGGCCTGATT--AATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCATAAAg
gi|11 : tttaatgccacttcaacagttttcagttatataattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGACCGAGAACATTTTGTCACAAAGAACGTACCGGTCGGGAATCAAACCCGGGACCTCTGAACTGACAAGTATGTACGCTACCATTGCGCTACCCAGGTGGATTCGCATTTACAGCTAGAAGTACAAGTCGGAAATAG--GTAAAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAAC---------CATTTGTATAAACGTTGGTTTAATTT-T-AACTCTTTGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAAAA-TTAAATAC---CAG--ATATAA-TTTAT-A-TA--TAAGTG-TTTTAACCTTTAGTTAAAGATAACCCTGGCCT--TT----TAT-----ACATTTATACAAG-TTGTT
gi|12 : ggtcaggtatcctaacggttttccaggaattcaatactaaccgatctttgcagataactggcactttcccctattgaaacGTACAAGTCGGAA-------------GCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATAGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAACTCATGGTTATCTTTATCC----TAAGT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TGA-TA--TTAGTGTTTTTAACCTTTGGTTAAACATAACCCAGGTCTGATTAAAATATAACCAACATTTATACACG-TTGTTATTTC-GTCCTTAATCTTTGTGGGATTGTAGGTTTTTAGGTCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCCCCATCCATACTTGTCAGAAACCCTTG-------AGAAGACAATGTCACCTATAAAT-AAAAAAATGTGCC
gi|12 : -AAAAAATGTGCCAAGATGGGAATCTAATT-TTTTTTGTAATCTGACATTGCATCTGCAGTGTCCCAaagatgggaatctaattttttttgtaatctgacattgcatctgcagtgtccca
gi|13 : gtacaagtcggaagctatttcatttccccccgactgtataactgtggaatagtttggacttcagcagccaattgtataaacgttggtttaattttaactcatggttatctttatcctaagtcttaaaataactaatatttaaataccagatatcattgatattagtgtttttaacctttggttaaacataacccaggtctgattaaaatataaccaacatttatacacgttgttatttcgtccttaatctttgtgggattgtaggtttttaggtcagagaaaaaaagtttaaattctcttccccatccatacttgtcagaaacccttgagaagacaatgtcacctataaataTAG--GCACAATGCTATTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGGAATTGTTTGGACTTCAGCAGC---------CAGTTGTATAAACGTTGGTTTAA-TT-TTAACTCTTTGTTATCTTTATCC----TTAGT----------------TTGAAAATAACATAA-ATTTAAATAC---CAG--ATATCATT---T-A-TA--TAAGTG-TTTTAACCTTTGGTTAAAGATAATCCAGGCCTTACTTAAATGTAATCAAATTTAATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTAGGATTGTAGGTTTTTAGGCCAGAA-A-AATAAA-GGTTTAAATTCAAATTCTCTTCCCCAT--ACACCTGTCCGAAACCCTTG-------AGAAGTCAA-------TATAAAT-AACAAAATGTGCCCGGC-CT-TCATGAGCTA--TTTCTTGTCC-AGAAAATCT----AGATAGGAATCTAATG-TTTT
gi|14 : ATGTACGCTACCTTTGCGCTACTCCGGCGGATTCGCATTCACAGTAGGAAGTACAATTCCGAAATAG--GTACAATGTTATTTCA------------------------------CC-C-GACTGCATAACTGTGGAATGGTTTGGACTTCAGCAGC---------AAATTGTATAAACGTTGGGTAAAGTT-T-AACTCTTGGTTATATTTATCC----TAAAT----------------ATTAAAATAAC-TAAAATTTGAATAC---CAG--ATATCA-T---TTA-TA--TTA-TGGTTTTA-------------GATAACCCAGCCCTGATAAGAATATAATCAACGGTTATACCAG-TTATTCTTTCAGTCCTTAAACTTTGAGGAATTGTCGG-TTTTAGGGCAGAG-A-AA-AAA-G-------TTTAat
gi|14 : gaTG-------GGAAGTCTATGTCACCTATTAATAAAAGAATTGTGCCC-GC-CCGTCCTGGGTTA-C-TTCTT---C-AGAAAATtgggaagtctatgtcacctattaataaaagaattgtgcccgcccgtcctgggttacttcttcagaaaataaag
gi|15 : gaatgtacgctacctttgcgctactccggcggattcgcattcacagtaggaagtacaattccgaaataggtacaatgttatttcacccgactgcataactgtggaatggtttggacttcagcagcaaattgtataaacgttgggtaaagtttaactcttggttatatttatcctaaatattaaaataactaaaatttgaataccagatatcatttatattatggttttagataacccagccctgataagaatataatcaacggttataccagttattctttcagtccttaaactttgaggaattgtcggttttagggcagagaaaaaagttta-TA--TTAGTGTTTTTTACCTTTGGTTAAAGATAACACAGGCCTGATTGAAATATAATCAACATTTATACAAG-TTGTTATTTC-GTCCTTAGATTTTGTGGGATTGTAGGTTTTTAGGCCAGAGAA-AA-AAA-G-------TTTAAATTCTCTTCTCGATTCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCAATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTATTTTTCTT---C-A-AAAATCT----AGATGGGAATCTATTT-TTTTT-GCAATATAGCATTGCATCTGCAGTGTCCCATATCGATTTTAAGGGTTAAATATCTAGTTTGTGGTCATTTTAACTTTAAACAAGAGGTTCATGTTGGTCAAAGGTCACTTAATTGATTTTATAATGATCCATaaag
gi|16 : ATAGAAGTACAGTGCTATTTCATTT-----------------TA--------CC-C-GAGTGTATAGCTGTGGAATGGTTTGGACTTCAGCAGCCAATTGTATCAATTGTATAAACGTTGACTGAA-TTGG-AACTCTTGGTTATCTATACCT----TGAGTCTTACAATTGAAATAACTTAAAATAAC-TAAAATCTAAATAA---TAG--ATATCATT---T-A-TA--TTAGTGTTTAAAACCTTTGAATAAATATAACCCAGGCCTGATTAAAATTTAATGAACGTTTATAAAAG-TTGTTCTTTCAGCCCTTAAAGTTTGTGg
gi|17 : gACTTTTTTTCACAAAGAACTTGCCCGTCGGGAATCGAACCTGGGACATCTGAATTGACAAGCATGTACGATACCATTGCGCTACACAGGCGAGTTCGCATTCAAAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTTC
gi|18 : gtttaatgtaacttcaacagttgtcagttatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAAC-TAAAATTTAAATACGATCGA--ATGTTA-T-----A-TA--T--GTGTTTTTGACCTTTGGTTAAAGATAACCTAGACCTGATTAAAATATAATCATCGTTCGTACAAGTTTGTTTTTTCAGTCCTTAAACATTGTAGGATTGTTGGTTTTTAGGCCAGAG-A-AA-AAA------------AAAATCTCTTCCCCACCCACACCTGTCCGAAACCTTTG-------AAAAGTCAATGGCACCTATAAAT-AAAAAAGTGAGC---GC-CCGTACTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATGGGAt
gi|19 : G--ATATCA-T---TTA-TAAATTAGTGTTTTTAACCTTTGGGTAAAGATAACCCAGGCCTGATTAAAATATGATCACCGTTCAT-CAGG-TTGGTCTTTCAGTCCTTAAACTTTGTGGTATAATTTGTTTTTAGGCCAGAG-A-AA-AAA-G-------TTTAAATTTTCTTCCCAACCCACACCTGCCCG--ACCCTTG-------AGAAGGCAAAGTCACCTATA
gi|2 : TTTTGTCACAAAGAACGTGTCCGTCGGGAATCGAAACCGGAACCTCTTAATTGACAAGCATGTTCACTATCATTGCGCTACCCAGGCAGGTTCGCATTCACAGTTAGAAGTACAAGTCGGAA-------------GCTATTTCATCCACCCCCCCCCCCCCCCCCC--------CCAC-GACTGTATAACTGTGTAATAGTTTGGACTTAAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAATTCGTGGTTATCTTTATCC----TCAAT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TTA-TT--TTAGTGTTTTTAACCTTTGGTTAAAGACAACCCAGGCCTGATTAAAATATAACCAACATTTATACAAG-TTGTTATTTC-GTCCTTAAACTTTGTGGGATGGTAGGTTTTTAGGCCAGAG-ACAA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACTTGTCCGAAGCCCTTG-------AGAAGACAATGTCACCTATAAAT-ATAAAAATGTGCACGGC-CT-CCCAGAGTTA-TTTTCTT---A-AAAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTATCCCAggaa
gi|20 : attaatgccacttcttcaacagttttcatttatataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAAGCGGAGAACATTCTGTCCCAAAGAACTTTCCCGTCGGGAATCGAACCCAGGACATATGAATTGACAAGCATGTACGCTGCCATTGCGCTACCCAAGCGGGTTTGCATTCACAGTAAGAAGTACAAGTCGGAAATTG--GTACAATGCTATT
gi|21 : acaactgacaacttcatcatttgaaacAGGCAAAGAACATTTTGTCACAACGAAATTTTCGGAACGGAATCGAATCCGAGGCCTCTGGATTAACAAGGCTGTATGCTACCACTGCGCTACCC
gi|22 : cagtactaacagatctttgcaagtaactaacatctattttccttacttgaaaccaACATTCTGTTATAAAGAACGTGCCCacagtcttcaacgtatagttag
gi|23 : ggtttaacgccatttcaacagttttcagttatatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTGAAACCCTTGCCCCCGGAGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAAAGTCT----AGTTGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGTCCC
gi|24 : TTTGTCACAAAGAACGTGCGCGTCGGGAATCGACCCCGGTACATCTGAATTGATAAGCATGTACGCTACCGTTGCGCTACCCGGGCGGGTTCACATTCTCAGTAATAAGAACAAGTCGAAAGTAG--GTACAATGCTATTT
gi|25 : TTCGTCACAAAGAACGTACTCGTCGGGAATCGAACCCGGGCCATCTGAATTGACAAGCATGTACGCTACCATTGCGTTGCCCAGGCGGGTTCGCATTCACAGTTAGAAGAACAAGTCGGAAGTAG--GTACAATGCTATTT
gi|26 : CGAAACCCTTG-------AGAAGTCAATGTCACCTATAAACAAAAAAA-TGTGCCCGGC-CT-TCCTGAGTTA-TTTTCTT---C-AAAACAGCT----AGATGGGAATTAAAAC-TATTT-GTAATATGGCATTGCATCTGCAGTGTCCC
gi|27 : AAACCCTTG-------AGAAGTCAATGCCACCTATAAATAAAAAAA-TATGCCCGGC-CT-TCCTGAGTT----TTCTT---C-AAAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATAGCATTGCATCTGCAGTGTCCCA
gi|28 : AGTCAATGGCACCTATAAATAAAAAA--TGTACCTGGCGTTCTTCTTATCTA-TTTTCTT---A-AAAAAATCG----AGATGGGAATCTAAACTTTTTT-GTAATTTGGCATTGCATCTGCAGTGTCCCA
gi|29 : AGAGGCGGAGGACATTTTGTCACAAATAACGTGCCCGTCGGGAATCGAACCCGGTACCTCTGAATTGACAAGCACGTACGCTACCACTGCGCTACC
gi|3 : AGAGACGGAAAACATTTTGTCACAAAGAACGTGCCCATCGGGAATCGAACCCGGGATTTCCGTATCAACAAGTACGTACGCTACCATTGCGCTACCCGGGCGGGTTTGCATTCACAGTTAGAAGTACAGGTCGGAAATAG--GTACCATGCTATTTCATAT-----------------CC--------CA-T-GATTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAAGTGTATAAACGTTGGTGTAA-TG-T-AACTTTTGGTCATCTTTATCC----TAAAT----------------CTTAAAATAAC-TAAATTTTAAATAC---CAG--ATATCA-T---T-A-TA--TTAGTGTTTTTAACTTTTGGGTAAAGCTAACCTAGGCCTGATTAAAATATAATCAACGTTTATACAAG-TTGTTCTTTCAGTCCTTAAACTTTGTGGTATTGTTGTTTTTTAGGCCAAAA-A-AA-GAA-G-------TATAAATTCTCTT-CTCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAATAAAAAAAATGTGCCC-TC-CTGTCCTGAGTTA-CGTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC--TTTC-GTAACATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTCAAATATCTTGTTTATGGTGATCTTGACTTGAAACAAGAGGGCCATGTTGGCAAAAGGTCGCTTAATTGATTATATAATGATCCAT
gi|30 : TTGACTTTAAACAAGAGGTTCATGATGACCAAAGGTCGCTTACTTGATTATATAAGAATCCAT
gi|31 : attgttatatTGCATCTGCAGTGTCCCATGTAGATTTTAA---TTGATTATATAATg
gi|4 : ACATTTTGTCACAAAGAACCTGCCCGTCGGAAATCGAATCTGGGACCTCTCAATTGACAATCATGTACGCTACCATTGTGCTACCCAGGCGGGTTCGCATTCAAAGTTGGAGGTACAAGTCAGAAGTAG--GTACAATGCTATTTCATTT-----------------CC--------CC-CCGACTGTATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAATGTTGGTTTAA-TT-TTAACTCTTGGTTATATTTAGTT----TAAGT----------------TTTAAAATAAC-TAATATTTAAATAC---CAG--ACATCA-T---T-AATA--TTAGTGTGTTTACCCTTTGGCTAAACATAACCCAGGCCTGATTAAAATATAACCAACACTTATACAAG-TTGTTATCTC-GTCCTTAAACTTTGTGAGAATGTAGGTTTTTAGGCCAGAG-A-AA-AAACG-------TTTAAATTCTCTTCCCCATCCACACCTGTCCGAAACCCTTG-------GGAAGTCAATGTCACCTATAAATATAAAAA-TATGCCCGGC-CT---------------TCTT---C-AAAAAATCT----AGATGGGAATCTAAAC--TTTT-GTAATATGGCATTGCATCTGCAGT
gi|5 : ggtttaatgcctcttcaacagttttcagttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATTTTGTCACAAAGAACGTGCCCATCGCAAATCGAATCCTGGATCTCCGGATTAACAAGCATGTACGCTACCATTGCGCTACCAGAGCGGGTTTGCATTCACAGTTAGAAGTACAAGTCGGAAATAG--GTACAATGCTATTTTATTT-----------------CC--------CA-C-GACTGTATTACTGTGGAATGGTTTAGACTTCAGCAGT---------CAATTGTATAAACGTTGGTGTAA-TA-T-AACTCTTGGTCATCTT-ATCC----TAAAT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---T-A-TA--TAAGTGTTTTTAACCTTTGGGTAAAGATAACCTATGCCTGATTAAAATATAATCAACGTTTATACAAG-TAGTTCTTTCAGTCCTTTAACTTTGTGGTATTGTTGGTTTTAAGGCCAAAG-A-AA-GAA-G-------TCTAAATTCTCTTCCCCACCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATTAATAAAAAAAATGTGCCC-TC-CCGTCCTGAGTCA-CGTTCTT---C-AGAAAATCT----AGATGGAAATCTAAAC--TTTC-GTAATATGGCATTGCATCTGCAGTGCCCCATATAGATTTCAAGGGTCAAATATCTAGTTTTTGGTGATCTTGACTTGAAACAAGAGGGACATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGATCCATc
gi|6 : GAGCATTTTGTCACGAAGAACGTGCCCGTCGGGAGTCGAACCCGGAACCTCCGGATTGACAAGCATGTACGCCATCAGTACGCTACCCGGGCGAGTTCACATTAACAGTTAGAAGTACAAGTCGGAAATAG--GTACAGTGCTTTTTCATTT-----------------CC--------CC-C-GACTGTATAACTGTGAAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAA----AGTTTAA-TTCT-AACTATTGGCTATCTTTATTC----CAAGT----------------CTTAAAATAAC-TAAAAGCTAAATAC---CAG--ATATCATT---T-T-TA--TAAGTGTGTTTAACCTTTGGTTAAAGATAACTCAGTCCTGACCAAAATTTAATCAACG-TTATACAAG-TTGTTGTTTCAGTCCTGAAACTTTGTAGGATTGTTGGTTTTTAGGCCAGAG---AA-AAA-G-------TTAAAATTCTCTTCCCCACCCACACCTGTCTGAAACCCTTG-------AGAAGTCTATGTCACCTATAAATAAAAAAAACGTACCC-GC-CTGTCTTGAGTTA-CTTTCTT---C-AGAAAATCT----AGATAGGAATATAAAC-TTTTT-GTAATATGACATCGCAACTACAGTTCCCCATGTATATTTTAAGGGTTAAATATCTAGTTTGCGGTGATCTTGACTTTAAACAAGAAGGTCATGTTGGTCAAAGGTCGCTTAATTGATTATATg
gi|7 : C-C-AGCTGTATTACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACGTTGGTTTAA-TT-TTAACTCTTGCTTATCTTTATTTCTAGTAAGT----------------CTTTAAATAAC-TTTTATTTAAATAC---CAGGGATATCA-T---TTA-TA--TTAGTGTTTTTAATCATTGGTTAATGATAACCCAGGCCTGATTAAAATATAATCAGCGTTTATACAAA-TTGTTCTTTCAGTCCTTAATGTTTGTGGGATTGTTGGTTTTTAGGCCAGAG-G-AA-AAA-G-------TTTAAATTCTCTTCCCAATCCACACCTGTCCGAAACACTTG-------AGAAGTCAATGTCACCTATAAAT--AAAAAATATGCCC-GC-CAGTCCTGTGTGA-CCCTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTATATTTTAAGCGTTAAATATCTAGTTTGTGGTGATCTTGACTTTAAACAAGATGGTCATGTTGGCCAAAGGTCGCTTAATTGATTATATAATGACCCAT
gi|8 : -GGCTGTATAACTGTGAAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACATTGGTT-AA-TT-T-TATTCTTGCTTATCTTTATTTATAGTAAGT----------------CTTAAAATAAC-T-----TTAAATAC---CAG--ATGTCA-TA--T-A-TA--TTAGTGTTTTTAACCATTAGTTAAAGATAACCCAGGCCTGATTAAAATAAAATCAGCGTTTATACACG-CTGTTCTTTCAGTCCTT-----TTGTGGGATTGTTGTTATTTAGGCCAGAG-A-AA-AAA-G-------TTAAAATTCTCTTCCCCATCCACACCTGTCCGAAACACTTG-------GGAAGTCATTGTCACCTATAAATAAAACA--TGTGCCCG-C-CAGTCCTGTGTGA-CTTTCTT---C-AGAAAATCT----AGATGGGAATCTAAAC-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATATATATTTTAAGCGTTTTATTTCTAGTTTGTGGTGATCTTGACTTTAACCTAGATGGTCATGTTGGCTAAAGGTAGCTTAATTGAGTATATAATGAg
gi|9 : TATAACTGTGGAATGGTTTGGACTTCAGCAGC---------CAATTGTATAAACATTGGTTTAA-TT-T-AACTCTTGGTTATCTTTATCT----TAAGT----------------CTTAAAATAAC-TAATATTTAAATAC---CAG--ATATCA-T---TTA-TA--TTAGTGTGTTTAACCTTTGGTTAAAGATAACCCAGGTGTAATTAAAATATAATCAACGTTTGTACAAG-TTGTTCATTCGGTCCTTAAACTTTGTGGGAATGTTGGGTTTTAGGCCAGAG-A-AA-AAC-G-------TTTAAATTCTCTTCTCCATCCACACCTGTCCGAAACCCTTG-------AGAAGTCAATGTCACCTATAAAT-AAAAAGATGTGCCC-GC-CCGTCCTGTATTA-CTTTCTT---CAAAAAAATCT----AGATAGGAAT-----C-TTTTT-GTAATATGGCATTGCATCTGCAGTGCCCCATGTAGATTTTAAGGGTTAAGTATCTAGTTTGTGGTGATCTTGACTTTAAACAATAGGGTGATGTTGACCAAAGGTCGCTTAATTGATTATATAATGATCCATctaatg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): GGTTTAACGCCATTTCAACAGTTTACAGTTACAT