lowQualScore : 111111111111111111111111
lowQualScore : 11111111 22222222 11111 22222 1111111 22222222 111 1 1 111 11111111 11111 111 111 333 1111111 1 111111111111 11111 1111 1111 11 2222222 4444444444444444444444 111111 222222 11 11111 1 22 11 1111 1 11 11 44444 3333 000000000000000000000000 1 222222222 1 1 11 11 11 11 1 1 1 1 11 111 111111111 111 1111 2222 11
lowQualScore : 5 3 2 444 77 2 0 5555 88888888 5 8888888 444 2 33 66666666 2 2 77777 2 7 2 3 2 5 33 1 22222 3333333 11111111 3 0 5 33 33 777 33 444 1 6 2 4 33 2 6 2 777777 2 2 2 444 33 444 2 2 000 99999999 77 9999 00000 444 222 2 2 2 2 000 0000000 2 33 2 2 3 555555555555 44 999999 77777 1 5555 5555 00 2222222 5 99999 777 0 1111111111111111111111 55 888 777777 1 6 111111 8 44 1 99 2 6 888 77777 5 11 3 8 6 6 44 5555 3 0 2 2 6 0 8 3 11 11 3 1 44444 0 8 1111 99 8 8 111111111111111111111111 33 2 2 999999999 0 2 66 0 22 33 2 2 0 33 4 3 22 0 4 888 0 5 5 4 66 88 3 55 666 3 4 55 55 222 3 4 4 666666666 4 222 3 3 2 888888888 33 6666 33 3 444 2 2 1 1111 3 3 22
lowQualScore : . . . ... .. . . .... ........ . ....... ... . .. ........ . . ..... . . . . . . .. . ..... ....... ........ . . . .. .. ... .. ... . . . . .. . . . ...... . . . ... .. ... . . ... ........ .. .... ..... ... ... . . . . ... ....... . .. . . . ............ .. ...... ..... . .... .... .. ....... . ..... ... . ...................... .. ... ...... . . ...... . .. . .. . . ... ..... . .. . . . . .. .... . . . . . . . . .. .. . . ..... . . .... .. . . ........................ .. . . ......... . . .. . .. .. . . . .. . . .. . . ... . . . . .. .. . .. ... . . .. .. ... . . . ......... . ... . . . ......... .. .... .. . ... . . . .... . . ..
lowQualScore : 7 7 5 888 44 6 2 7777 55555555 1 1111111 444 5 77 33333333 7 7 88888 9 3 9 6 9 7 11 9 55555 6666666 55555555 3 7 7 77 22 555 77 777 4 9 5 6 77 7 0 7 777777 7 7 7 777 77 777 7 7 111 99999999 99 1111 00000 666 666 9 9 9 9 999 7777777 9 99 9 4 3 222222222222 66 666666 77777 6 1111 7777 44 8888888 2 55555 000 8 0000000000000000000000 00 888 555555 0 7 000000 0 22 0 44 2 7 555 88888 0 00 0 0 7 7 00 2222 5 8 5 5 7 8 0 2 00 00 2 4 22222 8 0 8888 44 0 2 000000000000000000000000 55 5 8 888888888 8 5 22 0 22 88 5 0 2 88 0 5 00 0 5 555 7 0 5 0 55 66 6 00 444 6 0 55 55 555 0 0 0 555555555 1 333 3 3 5 666666666 11 5555 11 1 444 5 1 4 2222 0 5 00
consensus : TGTTGTTCCATTGATTCGTGCCC-CTAAGG--TGCGA-GATTCGCGCAT----GC----GCGTTATCTGCCGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA--AATNN-A--A-AAATC-TAAGTGTTACGNATAC-AAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATA----TTACATT------TCGTAACC-A--GCCTTG-ACCGTCGAAATC--ATG-AAAACG--CTTTCTCATTGAT---TCGTCCCC-TCTGATTGG--TT-GCTT-A------A-A-A-TA---T--C---C-AC-AATG-GGGAA-------GT--CCAGG-GCCGGTAC-----TATACTGTTC--GACAA--TAATTT-AGGA-TA-T-T-C-CC--T-G--TGTATTAAATG-T--T-TTTTA-G-----ACGG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCGTTTT--NNACCTGACCACTAT-GAAAA---AA--TAACATAATT--T--CAA---ATGTTT-----T--CA-T-TATAGT---ATA--AAAAATTA---GTG-GT--ACAC-AT-G--AAA-AAGTTTATTGCATTAAGAATTNTGGTTTGGGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAA-AA-TTGCACTTTATTTCA---CTCTTAACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACATAATATGTTATTGAC-GTTTTTAG--ATTGGCCTTTA-TTGAATTGACCAGCACGCA-------G-------TGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATAATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNANTGACAGG-AATATTTGTGATTTTTTTGGAGTATTTAATACCTG-T-TTTTT--T-CA--CA---TTT-TT-C--TT--G---GCT-TT-A-----CG--TGAGAATCGAGATTCGGTC-AACAACTTGTACAATATCCGGACGCTA--------CGAATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATA----ANANATAGTTAAT
Reference ( gi|1 ) : TGTTGTTCTATTGATTCGTGCCC-CTAAGA--TGCGA-AATTCACGCAT----GC----ACAATATCTGTCGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA--AATTA-A--A-AAATC-TAAGTGTAACGCATAC-AAGCAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATA----ATACATC------TCATAACC-A--CCCATG-ACCATTAAAATC--ATG-AACACG--CTTTCTCATTGAT---TCGTCCTC-TCTTATTGG--TT-GC-T-A------A-A-A-TA---T--C---C-AC-AATG-AGGAA-------GT--CCAGG-GCCGATAC-----TATACTGTTC--CACAA--TAATTT-AGGA-TA-T-T-A-CC--T-G--TGTATTAAATG-T--T-TTATA-G-----ATGG---TTTC--A------CTATTTAATATCA-T-TTTTAGCGCATTTT--GTACCTGACAACCAT-GAAAA---AG--TAACATAATT--T--CAA---ATGTTT-----T--CA-T-TATAGT---ATA--AAAAATTA---GTA-AT--ACAC-AT-G--GAA-AAGTTTATTGCATTAAGAATGATGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATAGCTGGAGGCCATATAAATACTT-TGG-AAAA-AA-TTGCACTTTATTTCA---TTCTTAATAGGGCGGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-TGTTATTGAT-GTTTTT-G--ATTGACCTTTA-TTAAATTGAC-------CA-------G-------TGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATCATCA-AGCGTCC-AGAATGTACCGCAGACATTTTT-CTA-TTGGTTCTGT--ACTTGGGAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGA-AATACTTGTGATTTCTTTGGGGTAGTTAATACCTG-T-GTTTT--T-CA--CA---TTT-TT-C--TT--G---GTT-TT-A-----CG--TAAGAATCGAGATTCCGTC-AGCAACTTGTACAATATCCGGACGCTA--------CGAATA--GTCCCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATA----ATAAATAACTAATATTGTACCAGAGTAAAAAAGC
gi|12 : TGATGTTCTGTTGATTCA-GCCCGCTAAGG--TG-GACAATCCACACATATATGC----GCTCTATTTGCTGCATATTTCTGCCACCAGATTT-------CA---TAT-TCA--A--TA-AC-ATAAATC-TAATGGTTACAAACAC-AAACAATAAAC-ATC-AAGAAACAAATATG--ACTCCATCATAATATTACATAAATT------TCATAGGC-G--ATCTCG-ATCATAAAAATC--AAG-TA-ATG--CTTCCTCATTGATACCTCACCCCCATCC--CTGT--TT-GC-T-ATATTAGA-A-A-TAGCCT--C---C-AT-TAT--AGGAA--------TCACCA---GCCAGT-----------TTG-TC--TA----------T-AGGA-TA-T-T-T-CCG-T-A--TGTATTAGATC-T--T-TT
gi|29 : cTGTTGTTTCATTGAATGGTGCAT-CTTAGA--TGGGA-GATTCACACAT----GC----G-AATATCTGCCACATATTTCTGCAACCAGATTT-------CA---GAT-ttgttaaacaaaacaattcatattatgtttataatgtcttttct
gi|20 : cTGTTGTTCCATAGATTCATCCCC-CTAAAG--AGCGT-GATTTATGCAC----GT----TCGTTATGTACTGCATATTTCTCCAACCAAATTTTATTTACCA---GATATTA--AACAACA--A-AAATC-TACATATTCTGAATAC-GAACAATAAAC-ATT-AAC---C--AACTG-TCTTTCAG-AAGAT---------ATC------TCAT--TC-A--TCAATATACTG-TAAAA-------------G--CTTTCTCATTGAgttgccatagtataaaaatta
gi|22 : aTGTTGTTCCGTCAATTCATCCCC-TTGTGG--TGCAA-GGTTTGTGTAT----GG----TTGCTATTTACTGCATATTTCTGCTTCCAAATTT-------CA---TAT-TCA--A--CA-ACCA-AAATC-TAAGTGTTACAAACAC-AAACCATTAAT-AATCAACAAACAAATATGTGATTCCAACTCAATA----
gi|39 : cTGTTGTTCCACTGATTCATCCCC-CTAAGG--TGtt
gi|3 : tGTTGTTCCATTGATTT-TGCCC-CTTAGA--TGTGA-GATTCGCACAT----GC----ACATTATCTGCCTCATATTTCTGCAAC-AGATTT-------CA---AAT-TTA--AACCA-A--A----TT-TAAGTGTTACACATAA-AAACAATAAAAAAAT-AACAAACAAAACTGATATTCCAGCAAAATA----TTACATT------TCTAAACC-A--GCCTTG-TCTGTCAAAATC--ATG-AAAACA--ATTTCTCATTGAT---TCGTCCCC-TCTGATTGG--TT-GCTT-A------A-A-A-TA---T--C---C-AC-AATG-GGGAA-------GT--CCAGG-GTCGATAC-----TGTACTGTTC--TACAA--TAATTT-AGGA-TA-T-TCC-CC--T-G--TGTATTAAATG-T--T-TTTTA-G-----AATG---TTTC--A------CTATTTAATATTA-T-TGTTAGCACATTTT--TAACCTGACCAATAT-TAAAA---A---TGACATATTT--T--CAA---ATGTTT-----T--C--T---TAGT---ATA--
gi|5 : GTTGTTCCATTGATTCATGCCC-CTAAGG--TGCTA-GTTTCCCACAT----GC----CCATTAACTGCTGCATATTTCTGCAACCAGGTTT-------CA---AAT-TTA--AGTAC-A--A-AAATC-TAAGTGTTGCGCATAC-ATACAATGAAA-AAT-AACAAACAAAACAGATATTCCAACAAATTA----TTACATT------TCGTAACA-T--GCCTTG-ACTGTCCAAATC--ATA-AA-ACG--CTTTCTCATTGAT---TCGTCCCC-TCTGATTGG--TT-GCTT-A------A-A-A-TA---T--T---C-AC-AGTG-GGGAA-------GT-----GG-GCCGATAT-----TATACTGGTTGACACAA--T--TTT-AGGA-TATT-T-C-CC--T-G--TGTATTAAATG-T--T-TTTTA-G-----ACGT---TTTC--A------CAATTTAATATTA-T-TTTTAGC---------GTACC--AC-----T-GAAAAAACAA--CAACAAAATT--T--C-G---TTGTTTTTTTCT--CA-TACACAAT---ATATTATAAATTA---ttcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|8 : GTTGTTCCAATGATTCAAGCTC-CTAAGG--TGC-A-AATTTGCACAT----CC----GCATTATCTGCCACATATTTCTACAACCAGATTT-------CC---AAT-TTA--AATAC-A--A-AAATC-TATGTGTTACACATAC-AAACAATAAAT-AAT-AACAAAGAAAACTGATATTCAAGCAAATTA----TTCCATT------TTGTTACC-T--GCCTTG-ACCTTCAAAATC--ATG-AAAACA--CCTTTTCATTGAT---TC-T----------------TT-GC-TCA------A-A-A-TA---T--C---C-AC-AATA-GGGAA-------AT--CCAGG-GCCGATAA-----TATTCAATTC--AACAA--AAATTT-ATGA-TA-T-T---CT--C-A--TGTATTAAATG-T--T-TTTAA-G-----ACAT---TTTC--ACTAGATCTATCTAATATTA-C-ATTTAGCGCATTTT--GAACCTGAGCACTAT--AAAA---AA--TAACATAATTAAA--AAA---AAATTC-----T--CA-C-TATTTT---ATA--AActcttgaaatacctgttttttttcacatttttcttttggctttacatttgaagcgattcatccaacaacttgtacaatatacgaacgctacggatagttgcgcgagcagggaatctacaagattgtcgaggggatgaataagtgagaagaaatgaatctatgaaattaaggcataaattgttaatgacaaataaag
gi|7 : TTGTTCAATTGATTCGTGCCC-CCAAGG--TACGA-GATTTGGGCAT----GC----GCATTATCTGCTGCATATCTCTGCAACCTGATTT-------CA---AAT-TTA--AATAC-A--A-AAA-C-TAAGTGTTACACATAC-AAACAATAAAA-GAT-AACAAACAAAACAGATATTCCAG-AAATTA----TTACATT------TCGAAACC-A--GCATTG-ACCGTCGAAACC--ATC-AAAACG--TTTTCTCATTGAT---TCGTCCCC-TCTGATT-G--TT-GCTT-A------A-A-A-TA---T--C---C-AC-AATG-GGGAA-------GT--CCTGG-GCCGATGA-----TATACTGTCT--GACAA---AATTTGAGGA-CA-T-T-CTCC--T-G--TGTATTAAATG-T--T-TTTTA-G-----GTGT---TTTC--A------CTATTTAATATTA---ATTTAGCGCATTTT--GAACCTGACCACTGTAAAAAA---AA--TAACATAATttactcatcatacctttttccatattttttttttttgctttaccagacactcgagattcggccaacaacttgtacaatatccgaacgctacgaatagccgcgcgagcacggaatctacaagatagtcgaggggacaaatcaatgagaaggaacgaatctatg
gi|4 : TGTTCCATTGATTCATACCC-CTAAGA--TGCGA-GATTCGCACAT----GC----GAATTATCTGCCGCATATTTCTGCAACCAGATTT-------CC---AAT-TTA--AGTTT-A--A-AAATCATAAGTGTTACGGATAC-AAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATA----TTACATT------TCGTAACC-A--GCCTCG-ACTGTCAAAATC--ATG-AAAACA--CTTTCTCATTGAT---TTGTCCCC-TCTGATTGG--TT-GCTT-A------A-A-A-TA---T--C---C-AA-AATG-GGGAA-------GT--CCAGG-TCCAATAC-----TATAATGTTT--GACAA--TAATTC-AGGA-TA-TCC-C-CC--T-G--CATATTAAATG-T--TCTTA-A-G-----ATGG---TTTC--A------C----TAATATTATT-TTTTAGTGCATTTT--GAACTTAACCACTAT-AAAAA---AA--TAACATAACT--T--CAA---ATGTTT-----T--C-----ATGGA---ATA--AAAAACTA---GTG-GT--AAAC-AA-A--AAA-AAGTTTATTGCATTAAGAATTGTGGTTTGTGTCATCATTTGTAGGATCG--TATA----ATATCTCAAGTGCATGTAAACACTT-TGGAAAAA-AA-TTGCACTTTATTTCA---CTCTTAACAGGGCCGCTGTCAAGAGGACTT-AGGACACAGATACAG-ATGCAC--GTGC--ACACA-----------TTATTGACAGTTTTA-A--ATTAATCTTTA-TTGAATTGACAAGCTCGCA-------G-------TATTACTTAACTTTTCGaataaaaattcccatacactttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
gi|27 : GTTCCATTGATTCTTGCCG-CTAAGGGGTACAA-GATTTGCACAT----GT----GCATTATCTGCCGCATATTTCTGCAACCAGATCT-------CA---AAT-TTA--AATAC-A--A-ATATC-TAAGTGT
gi|2 : TCCATAGATTCACATCC-AAAAGA--TGTGA-TATTCGCGCAT----GC----GCATTATCTGCCCCACATTTCTGCAACCAGATTT-------CA---GAT-TTA--AATTA-A--A-AACTC-TGAATGTTACGTATAC-AAACAATAAAA-AAT-AAAAATCAAAACTGTCATTCCAGCAAGATA----TTACATT------TTGTAACCTG--CCC-TG-ACCGTCAACATC--ATG-AAAATG--CTTTCTCATTGAT---TCGTCGCC-TCTGCTTGG--TT-GCTT-A------A-A-A-TA---T--C---C-AC-AATG-GAATA-------GT--CCAGG-ACCGAAAC-----TATACTGATC--TACAA--TAATTT-AGGA-TA-T-T-CTCC--T-G--TGTATTAAATG-T--T-TT-TA-G-----ATGG---TGTC--A------CTATTTAATATT--T-TTTTAGCGCATTTT--CAATCTGACTACTAT-GAGAA---AA--AAACTTAATT--T--CAA---TTGTTT-----T--C-----ATAGT---ATA--AAGAATTA---GTT-GT--ACAC-AT-GTAAAA-AAGTGTATTGCATTAAGAATTATGGTTTGGGTCATC-TTTGTAGATTCATATAGA----ATATCTCAAGGCTATATCAACACTTATGA-AAAA-AA--AGGACTTTATTTCA---CTCTTAACAGTGCGGCCGTC-------------GACAT--ATACACAACG-GC--GCGC--GCGCGCACAT--TATGTTATTG-C-CTTTTT-GCAATTGG-CTTTA-TTTAATTCACCATCACACA-------G-------TGTTGTTTAAGTTTTCGACGGATAGTATAATCA----------------------AAAATGCACCGCAGACATGTTT-TTG-TTGATTCTGT--ACTTGGGAGTATTTATAAGGGCATTTTTTTTACATTTATTGACAGG-AATATTTGTGATTTTTTTGTGGtaggccataataaa
gi|9 : TCCATTGATTCGTGCCC-CAAAGG--TGTGA-GATTCGTTGAT----GT----GCATTATCTGCTGCATATTTCTGAAACCAGATTT-------AA---AGT-TTA--AATTC-A--A-AAATC-TAAGTGTTACATATAC-AA----TAAAA-AAT-AACAAA---AACTGATATTCAAGCAAATTATT--ATAAATT------TCATAACC-T--GCCTTG-ACCATCGAAATC--ATG-AAATCG--CTATTTCATTGAT---TCATCCCA-TCTGATTGA--TT-GC-T-T------A-A-A-TA---T--C---C-AC-ATTG-AGGAA-------AT--CCAGG-GCCGACAA-----TATACTGTTC--AACAA--AAATTT-AGGA-TA-T-T---CCTAT-G--TGTATTAAATG-TTGT-TTATACGTTTATACGT---TTTC--A------CTATTTAATATTA-T-TTTTAGCATATTTTTAACACCTGACCCCTAT-AAAatcccccccccaccccaaacattacattttatcttataagtgtttttttcacatttttcttggctttacttgataatcgagattcagtcaacaacttgaacaatatccggaatctacgagattgtctaggggacaaattaatgacgaggaacgaatctatgagaataaggcataaatagttgtttttatttacaatgccacaagatgaaaaaagt
gi|15 : cTTGATCCGTGCCC-ATAAAA--TGCAA-GAGACGCGCAT----GC----ATGTTATTTGTCGCATATTTCTGCAACCAGATTT-------CA---AAT-TAA--AAAAC-A--A-AAATC-TAAGT-------ACAC-AAGCAATAAAA-ATT-AACAAACAGAACTGTTATTCCAG--------------CATT------GCATAACC-A--GGCTTG-ACCATCGAAATT--ATGTAAAA-----------AT-----------------CTGATTGG--TT-GCTT-A------A-A-A-TA---T--T---C-AC-TATG-GGGAAAGGACCCAT--CCAGGTACCAGTAC-----TATACAGTTT--GACCA--AAATTT-CGGA-TA-------------------ATTGA----C--T-TTTTA-G-----ACAG---TTTC--A------cataatcctctttttttctcatacactatatctttaaattactcttcatatacctgttttttttcacatttttcttttggctttatatgggaatcgagattcgcccaacaacttgtacaatatccgaacactaatagtctatgaatagtcatgcgagcatggact
gi|24 : TTGATTCGTGCCC-CTAAAG--TGCGA-GATTCACGTAC----GCGCGTGCGTTATTTGCCTCATATTTC
gi|28 : gTGATTCATCTCT-CCAAAG--TTCAT-GATTCGCATAT----GA----ACATTATTTCCAGAATATTTCTGCAATTAGATTT-------CC---AAT-TCA--A--CA-AC-A-AAATC-AAAgtccagaggacgaatcaatgtaaaggaacaattcagtgagaaaagggcaaacatcaaatttgagaacaaaaccatatat
gi|16 : ttgtcttcccaC----ACGCTATTTACCGCATATTTCTGCCACCATATTT-------CA---TAT-TCA--A----------------------CAACAAACAC-AAACAATAAAA-CCA-AACATACGAAAATAGGATTACAACAAAATA----TTAGATT------Taattgggatataa
gi|25 : ATATTTCTGCAATCAGATTT-------CATATAAT-TTAACAAT---A--A-AAATC-TATTTGT------TACAAAACAACAACA-ATC-AACAAAtctgtatttttttttaatgtttctcatcgatccatcccctctatttgctttactaaaacatcctctagtataggatctccatccagtatatctatatactttttggcaaggtataagctttccttgtgtatgcaattttttcgaccaacatgttttttcatattatactcaa
gi|13 : ccattgattcatctgattctcctgaaggtctgtggttctgagctggttattttttactacatgtatATAC-AAACAACAAGA-A-T-ATTAGACATATGTGAT--TACA--------------ACATT------TCATAAGT-AGTCCCA---ATAATCCAAATT--CTG-TAAAAG--CTTTCTCGCTGAT---TCATCCCC-TCTAACTGT--TT-GC-T-A------ATA-A-TA---T--C---T-GC-CATa
gi|11 : gaCATCAAAATG----TTACATTAAATTTTTATAAGC-A--GTCTCT-ATCATCGAAATT--CTG-TAAAGG--CTTTCTCATTGGT---TCATCCTC-TCTGATTGG---T-GC-T-A------A-A-AGTA---T--C---A-GC-AATA-TGGAAT------CT--CCAGG---CAGTACT----TTTACTGTTC--GGTG----AAGCT-ACAAGTA-T-T-C-CCT-T-A--TGAATTAGATACT--T-TTTTG-G-----CTGA---CAAA--A------CTGTTTTAAATTA-TGTTTGAACGGGTTTT--TT--CT---AAGTGT-TCAA--------TAACAAAAAT------AA---ATGTTT-----TAACAGT-TAAAATTTCATG--AAAAAGTA---tatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaaatagttgcatagtcatggaatctgcgaggttatcgaggggacgaat
gi|14 : aTCAAAATC--CTG-TAAACG--CTTACACATTGAT---TCATTCCC-TCTGATTGG--TT-GA-T--------A-A-T-TA---T--CCTTC-AT-TATG--GGAA--------TCACCAG----CTATAC-----TAAACTGTTC--TGCAAAGGAA--T-AAGA-TA-T-T---TC--T-GTATGTATTAGATG-T--T-TTTTG-G-----CCGGCAATCTC-----------GTTT-ATATTA-TGGTTTAACAAGTTTT--CTAGTTGTTTACTAC-GAAAA---AAT-TAACA-AATT--T--TAATAGATG-----------CA----ATGTC---ATG--AAAAAGTACCTGTACAT--ATAC-catctaacattttaccgagtatagttcatgaaacttctacaataaccggacacaacaaatagttaagcgagcatggaatacataggattcttaacgactgaatcataaaaaggaatgaatcaaaagaataaagcata
gi|19 : AAATCCTATG-AAC--G--CTTT-TCATT-------TGTCCAC-TTTGATTTG--TTTGT-A-A------A-A-A-TA---T--C---CGAC-AAC---------------T--CCAG---CTAGTAC-----TTCGTTGTCC--AACAA--TAGTTT-AGGA-GG-T-T-C-CC--TTG--TGTGTTAGATG-T--T-TTATA-G-----TTG-----CTG--A------CTGTTTccggtagtattttatattttccgtgcaattgttgatgattaaaaattgtccaagaacttgtacaatatccagacacaatgaataggtgcaatggcatggaatt
gi|10 : TC--ATA-GATTCGTTCCTTCTCATTGAT---TTGTCCCC-TCTtaacgagttttccagttattctctggcaaaatttatgaagtattaacagttgaaacacaatcaaaaagta
gi|16 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatatattttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtTTTCTCATCGAT---CCATCCCC-TC-TATTTGCTTT-AC-T-A------A-A-A-CA---T--C---C-TCTAGTATAGGAT-------CT--CCA---TCCAGTATATCTATATACTTTTT--GGCAA---GGTAT-AAGC-T--T-T-C-CT--T-G--TGTATGCAATT-T--T-TTgagtatgtccgcata
gi|18 : cacgctatttaccgcatatttctgccaccatatttcatattcaacaacaaacacaaacaataaaaccaaacatacgaaaataggattacaacaaaatattagattttctgtatttttttttaatgTTCCC-TCTCATTGG--TT-AC-T-A------A-ATA-TA---TCGC---C-AT-TATG-GGAAT-------CT--CCA---GCCAGTAC-----CATTCTGTTT--GGCAA--TAGTAT-ACG--TA-T-T---CC----------ATTAGATG-T--T-TTTTG-G-----CCGA------CAAA------CTGTTTGATATTC-TGTTTTAAAGAGTTTT--CTAAGTGTTCACTAT-AAAAA---AAATTAAAAAAATT--TAACAG---CTG------------A---TATATT---ATG--AAAAAcgaccaacatgttttttcatattatactcaa
gi|26 : AACACAGTT--T--CAA---ATGTTT-----C--C----T-TAGT---ATA--AAATTTTT---TTG-GT--GCAC-AT-C--AAA-AAAATTATTGCATTAAGAATTATTATTTGAGTCATC-TTTGTAGGATTGTATAaaaagtattttaccttttgtcatagtata
gi|10 : taaATT--T--CAG---ATGTTG-----C--CA-T----AGT---ATA--AAAA-TTA---TTG-GT--ACACTATTG--GTATAA--TTATTG------GAATTTTGGTTTGGGTCACC-TTAGTAGGATC-T-TATA----ATATCTCAAGGCCATAGAAGCACTT-TGG-ATAA-AA-TTGCACTAAATTTCA---CACTTAACAGGGCTACCTTCAAACAGACTA-AAGACACAGATACAC-ACGCGA--GCGCAAGTACACACA-----TGTTATTGAT-GTTTTatgtttcaagtgcat
gi|6 : ccagTT-----T--CA-T--AT--T---ATA--AAACATTA---GTG-TTTAAGAC-AT-G--ACA-AAGTTTATTGCATTATAGGTTTTGGTTTTAGTCATC-TTTGTAGGTTTGTGT-TA-----TATCTCAAGGTCATATAAATACTT-TGG-AAAAAAA-TTGCACTTTATTTCA---CTCTTAACAGGGCCGCCCTCAAGAGGACTT-AGGACACAGATACAC-ATGTGCATGTGC--GCATATATATAAT-TATTATTGAT-TTTTTTAA--ATTGGCCTTTA-TTGAATTGACCAGCATGCA-------G-------TGTTGCTTAACTTTTCGACCGATAATATAATAAAGGCAGATAATCA-AGCATCC-AGAATGTACCACAGACA--TTT-CTG-TTGGTTCTGT--ACTTAGAAGTGTTTAAAAGGAGA--TTTTTTACATTTAATG--AGA-AATATTTGTGAT---TTTGGAGTATTT---------T-TTTTT--T-CAATCA---TTT-Tatatattttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtagaggggacaaatcaatgagaaggaacgaatctatgagagtatgtccgcata
gi|3 : gaTC-ATTGTAGGATTATATATATGTAATATCTCAAGGCCATATAAACACTT-TGG-AAAA-AAATTGCACTTTGTTTCA---CTCTTAATGGGGTTGCTGTCATGAGGA-TT-AGGACACAGATACAC-ACACGC--GTGT--GCACACATATAATATGTTATTGAT-GTTTTTAG--ATTGGCCTTTA-TTGAATTGAC-------CA-------GCATACAGTGTTGCTTAACTTTCCGACGAATAGTATAATCAAAGGAGATAATCA-AGCATCCGAGAATG---CACAGACATTTTT-TTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTAACTGACAGG-AATATTTGTGATTTTTTTGGAGTATTTattttattactcatcttatacctgtccttttcacattttccttggctttacatgagaatcgagattcggtcaacaaattgtacaatatccagatgctacgaatagtcgcaccaagcaaggaatctatgagattgtcgagggaacaaatcaatgagaaagaccgaacctatgaaaataaggcat
gi|38 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatat-AAAA-AA---GCATTTTATTTCACTCTTCTTGACTGGACCCCCTTCAAGAGGACTTAAAGACACttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|21 : TTGGTCTTTAATTGAATTGAC-------CATCACACAG-------TGCTGCCTAATATTTCGATGGATAGTATAATCAAGGGAGATTATCACAG-ACCA-AGAATACAATGCAGACATTTTTACTATTTGGTTCTGTGAA---GGAAGTGTTTAAAAAGCCA--TGTTTTACATTAAAAGA-GGATAATG-TTATGATTTTT
gi|5 : AATACCTG-T-TTTTTT-T-CA--CA---TTT-TT-CTTTT--G---GCT-TT-A-----CA--TTTGAA--GCGATTCATCC-AACAACTTGTACAATATACGAACGCTA--------CGGATA--GTTGCG-CGA--GCAGGGAATCTA---CAAG-ATTGTCGAGGGGAT-GAATAAGTGAGAAGAAATGAATCTATGAAATTAAGGCATAAATTGTTAATa
gi|6 : gttgttccattgattcatgcccctaaggtgctagtttcccacatgcccattaactgctgcatatttctgcaaccaggtttcaaatttaagtacaaaaatctaagtgttgcgcatacatacaatgaaaaataacaaacaaaacagatattccaacaaattattacatttcgtaacatgccttgactgtccaaatcataaaacgctttctcattgattcgtcccctctgattggttgcttaaaatattcacagtggggaagtgggccgatattatactggttgacacaattttaggatatttccctgtgtattaaatgttttttagacgttttcacaatttaatattatttttagcgtaccactgaaaaaacaacaacaaaatttcgttgtttttttctcatacacaatatattataaattactcttgaATACCTG-T-CCTTT--T-CA--CA---TTT-TC-C--TT--G---GCT-TT-A-----CA--TGAGAATCGAGATTCGGTC-AACAAATTGTACAATATCCAGATGCTA--------CGAATA--GTCGCACCAA--GCAAGGAATCTA---TGAG-ATTGTCGAGGGAAC-AAATCAATGAGAAAGACCGAACCTATGAAAATA----Agacaaataaag
gi|7 : gatttcatattataaaacattagtgtttaagacatgacaaagtttattgcattataggttttggttttagtcatctttgtaggtttgtgttatatctcaaggtcatataaatactttggaaaaaaattgcactttatttcactcttaacagggccgccctcaagaggacttaggacacagatacacatgtgcatgtgcgcatatatataattattattgatttttttaaattggcctttattgaattgaccagcatgcagtgttgcttaacttttcgaccgataatataataaaggcagataatcaagcatccagaatgtaccacagacatttctgttggttctgtacttagaagtgtttaaaaggagattttttacatttaatgagaaatatttgtgattttggagtattttttttttcaatcattttattttattactcatcttATACATT-T-TTTTT--T-CA--CAATTTTTATT-T--TT--G---GCT-TT-A-----TG--TGAGAATTGAGATTCGGCC-AACAACTTGTACAATATCTTAAAGCTA--------TGAA----------------ACACAGAATCTA---CGAG-ATTGTCAAGGAATC-AAATCAATGAGAAGGAACAAATGTATGAAAATA----AGACATAggcat
gi|9 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaacgttttctcattgattcgtcccctctgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttattatttaataactaactcatcttATACCTG-T-TTTTT--TTCA--CA---TTT-TT-C--TTTTG---GCT-TT-A-----TA--TGGGAATCGAGATTCGCCC-AACAACTTGTACAATATCCGAACACTAATAGTCTATGAATA--GTCATG-CGA--GCATGGA
gi|8 : ctccattgattcgtgccccaaaggtgtgagattcgttgatgtgcattatctgctgcatatttctgaaaccagatttaaagtttaaattcaaaaatctaagtgttacatatacaataaaaaataacaaaaactgatattcaagcaaattattataaatttcataacctgccttgaccatcgaaatcatgaaatcgctatttcattgattcatcccatctgattgattgcttaaatatccacattgaggaaatccagggccgacaatatactgttcaacaaaaatttaggatattcctatgtgtattaaatgttgtttatacgtttatacgttttcactatttaatattatttttagcatatttttaacacctgacccctataaacataatcctctttttttctcatacactatatctttaaattactcttcatATACCT-----TTTT--C-CA--TA---TTT-TT-T--TT--TTTTGCT-TT-A-----CC--AGACACTCGAGATTCGGCC-AACAACTTGTACAATATCCGAACGCTA--------CGAATA--GCCGCG-CGA--GCACGGAATCTA---CAAG-ATAGTCGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGct
gi|10 : gttgttccaatgattcaagctcctaaggtgcaaatttgcacatccgcattatctgccacatatttctacaaccagatttccaatttaaatacaaaaatctatgtgttacacatacaaacaataaataataacaaagaaaactgatattcaagcaaattattccattttgttacctgccttgaccttcaaaatcatgaaaacaccttttcattgattctttgctcaaaatatccacaatagggaaatccagggccgataatattcaattcaacaaaaatttatgatattctcatgtattaaatgtttttaagacattttcactagatctatctaatattacatttagcgcattttgaacctgagcactataaaaaataacataattaaaaaaaaattctcactattttataaattactcatcATACCTG-T-TTATT--T-CA--CA---TTT-TTTC--TT--G---GCT-TA-A-----CA--TGAGAATTGAAATTCGTTT-AACATTTTGTACAATATCAAAATGCTA--------TGAATA--G-CATA-TGA--GCATGGAATTTA---TGCA-GTTGTAGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGAGAGTA----
gi|14 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatatattttataaattactcatcatATACCCGGTAGTATT--T-TA--TA---TTT-TC-C--GT--GCA-ATTGTTGA-----TGATTAAAAATTG----TCCA---AG-AACTTGTACAATATCCAGACACAA--------TGAATA--G--GTG-CAATGGCATGGAATtgtccgcata
gi|3 : tcaaaatcctgtaaacgcttacacattgattcattccctctgattggttgataattatccttcattatgggaatcaccagctatactaaactgttctgcaaaggaataagatatttctgtatgtattagatgttttttggccggcaatctcgtttatattatggtttaacaagttttctagttgtttactacgaaaaaattaacaaattttaatagatgcaatgtcatgaaaaagtacctgtacatTATCTG-T-TTTTTTTT-CA--CA---TTT-TT-C--TT--G---GCT-TT-A-----CA--TGAGAATCGAGATTCTGTC-AACAACTTATACAATATCTGGATGCTA--------CAAGTA--GTCAAG-CAA--GTATGGAATCTA---CAAG-ATTGTCGAGGAGAC-AAAt
gi|2 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatattcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatctttTG-T-TTTTT--T-CA--CA---TTT-TT-C--TT--G---GCT-TT-A-----CT--TGATAATCGAGATTCAGTC-AACAACTTGAACA-------------------------ATA---TCC------------GGAATCTA---CGAG-ATTGTCTAGGGGAC-AAATTAATGACGAGGAACGAATCTATGAGAATAAGGCATAAATA
gi|17 : tccatagattcacatccaaaagatgtgatattcgcgcatgcgcattatctgccccacatttctgcaaccagatttcagatttaaattaaaaactctgaatgttacgtatacaaacaataaaaaataaaaatcaaaactgtcattccagcaagatattacattttgtaacctgccctgaccgtcaacatcatgaaaatgctttctcattgattcgtcgcctctgcttggttgcttaaaatatccacaatggaatagtccaggaccgaaactatactgatctacaataatttaggatattctcctgtgtattaaatgtttttagatggtgtcactatttaatatttttttagcgcattttcaatctgactactatgagaaaaaaacttaatttcaattgttttcatagtataaagaattagttgtacacatgtaaaaaagtgtattgcattaagaattatggtttgggtcatctttgtagattcatatagaatatctcaaggctatatcaacacttatgaaaaaaaaggactttatttcactcttaacagtgcggccgtcgacatatacacaacggcgcgcgcgcgcacattatgttattgcctttttgcaattggctttatttaattcaccatcacacagtgttgtttaagttttcgacggatagtataatcaaaaatgcaccgcagacatgtttttgttgattctgtacttgggagtatttataagggcattttttttacatttattgacaggaatatttgtgatttttttgtggatcccccccccaccccaaacattacattttatcttataagTTT--T-C--------CTT-TT-T--TT--A---GTG-CT-AAAACTTA--TAATAAATAATATTCC----AGAAACTTGTACAGCATCTTGACACAA--------TGAATATAGTTACA-CAA--GTATGGAATCCA---CAAG-ATTCTCGAGGGGAC-AAATCAATGAGAAGGAATGAATATATGAAAATgttgtttttatttacaatgccacaagatgaaaaaagt
gi|30 : ataaCGTCCAAAAACTTGTACAATATTCGGACgtagcatatgtgctcttgttatgttacgatttattgagtgttaagaaagttgtaaaggacaagcttatctggagcaagttcccattt
gi|32 : attattttacattttcagttatacagtctagttgataaataatTC-AACAACTTGTACAATATCCGGATGCCA--------AGAATA--GTCATG-TGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAT-GAATCAATGAGatgataaaacttcaataaaggcatg
gi|11 : AACTTCTACAATAACCGGACACAA--------CAAATA--GTTAAG-CGA--GCATGGAATACA---TAGG-ATTCTTAA--CGACTGAATC-ATAAAAAGGAATGAATC-AAAAGAATA----A
gi|31 : acatcaaaatgttacattaaatttttataagcagtctctatcatcgaaattctgtaaaggctttctcattggttcatcctctctgattggtgctaaaagtatcagcaatatggaatctccaggcagtacttttactgttcggtgaagctacaagtattcccttatgaattagatacttttttggctgacaaaactgttttaaattatgtttgaacgggttttttctaagtgttcaataacaaaaataaatgttttaacagttaaaatttcatgaaaaagtacatctaacattttaccgagtatagttcatgaAACTTGTACAATATCCAGACACAA--------CAATTA--GTTTAG-TGA--GCATGAAATCCACATCGAG-Aagcata
gi|37 : aggttgatgataaacaatagtctaaaAACTTGTACACTATTTGGACACAA--------AAAATA--GTa
gi|36 : agttgatgataaacaattgcataaaACAATATCCGGACGCTA--------CGAACA--ATCCCA-CGA--GTGCGAAATCCA---CGAG-AGTGTCGAGGGAAC-GAATCAATtaaatg
gi|23 : aAATATCTG-----CA--------CAGGTA--GTTGCA-CAC--ACATGGAGT-TA---ATAGTATGGTCAAGGGGGC-AAATTGATGAGAAGCAATGAATTAATGAGAATA----AGATATAt
gi|35 : cacttttcttctcttttattttgttggtgtttgatataatgattaacaatcttccaaaaaaggacaaA--------TGGATA--GTTGGG-CAA--GCACGGTTGCTG---CGAG-ATTCTTGAAGGGCG-GAATCAATGAGAAGGAATGAATCTACGAGAATc
gi|13 : acaAATA--GTTGCA-TAG--TCATGGAATCTG---CGAG-GTTATCGAGGGGAC-GAAT
gi|33 : gaatacaaacaacaagaatattagacatatgtgattacaacatttcataagtagtcccaataatccaaattctgtaaaagctttctcgctgattcatcccctctaactgtttgctaataatatctgccattatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaGA--ACATGGAATCCA---CGAA-TTTGTCGAGGGAAC-TTATCGACGAAAAAGAACAGATTGTTGAGAATA----A
gi|24 : aaaatttcaaatTCGTCCAGAGGAC-GAATCAATGTAAAGGAACAATTCAGTGAGAAgaccta
gi|3 : gttgattcgtgcccctaaagtgcgagattcacgtacgcgcgtgcgttatttgcctcatattGAGGGGAC-GAATCAATGAGAAaagggcaaacatcaaatttgagaacaaaaccatatat
gi|7 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatGAGGGGAC-GAATCAATGAGAA--AACGtgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatattcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|5 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaaGAGGGGAC-GAATCAATGAGAAAGtgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|34 ): TACAGGATTGCCGAGGGCATGGGTAAGTGAGAAGACATAAATAAATGAAAAGGTGCAAATCAGAAGTGAATGATACATAATC
Alignments
lowQualScore : 1111 111111111 111111 111 1 11111111111111111111111111111111 11 333333333333333 111 1111 11 111 333333 11 11 33333333333 1111 3333333333333 555555555555555555555555555555555555 2222222222222222 1111
lowQualScore : 666 333 2 2 33 2 0 5555 4444 444 666666 333 7777777 444 4 5555 99999 2 66 2 2 2 4 1 0000 888888 1 2 0 2 33 444 0 444 1 2 7777777 444 777 444 2 2 2 666666666 7777 000000 1 000 2 2 2 2 2 2 5 2 2 444 444 44444444444444444444444444444444 2 888 55 8888 1 55 3 77 4 66666 7777 1 999999999999999 0 44 5555 66 4 99999 1 2 5 333 2222 6 5 66 000 1 0 0 5 6 1 99 99 1 444444 11 7777 3 6 2 2 2 0 5 8 5 8 3 0 8 8 11 11 1 11 5 44444444444 7777 6666666666666 666666666666666666666666666666666666 6666666666666666 55 99 4 777 4 4 55 55 777 8 0 3 99999999 2 33 44 2 22 3 444 2 2 0 9999 1 1 2222
lowQualScore : ... ... . . .. . . .... .... ... ...... ... ....... ... . .... ..... . .. . . . . . .... ...... . . . . .. ... . ... . . ....... ... ... ... . . . ......... .... ...... . ... . . . . . . . . . ... ... ................................ . ... .. .... . .. . .. . ..... .... . ............... . .. .... .. . ..... . . . ... .... . . .. ... . . . . . . .. .. . ...... .. .... . . . . . . . . . . . . . . .. .. . .. . ........... .... ............. .................................... ................ .. .. . ... . . .. .. ... . . . ........ . .. .. . .. . ... . . . .... . . ....
lowQualScore : 111 999 2 2 11 4 5 0000 7777 222 444444 999 6666666 111 7 0000 55555 5 33 7 8 7 6 1 0000 222222 9 0 5 7 77 999 5 777 4 5 9999999 444 888 444 5 5 5 666666666 8888 111111 8 999 5 5 5 5 5 5 0 5 5 444 444 33333333333333333333333333333333 6 777 88 9999 8 33 3 99 8 44444 2222 2 888888888888888 8 22 8888 11 4 88888 0 2 7 777 1111 7 7 44 000 7 7 7 7 7 0 22 22 0 888888 77 0000 7 7 5 5 2 8 8 0 0 0 2 8 0 0 00 00 0 88 0 00000000000 0000 7777777777777 999999999999999999999999999999999999 5555555555555555 55 55 0 000 0 0 55 55 000 0 4 1 11111111 2 11 22 2 99 7 111 4 4 6 4444 0 0 1111
consensus : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA-AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TATGTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGGAATA---------T-TTGTG----AT-------------TTTTTT---------GAANTATTT-------------A----ATA----------------CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--G---GCTTTACGTGAGAATCGAGATTCGGCC-AACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATA----AGACATA----GTTAAT
Reference ( family-2272 ) : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-NNAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTTGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCGTTTT--NNACCTGACCACTAT-GAAAA-AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGGGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACATAATATGTTATTGACGTTTT-TAGATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATAATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNANTGACAGGAATA---------T-TTGTG----AT-------------TTTTTT---------GGAGTATTT-------------A----ATA----------------CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--G---GCTTTACGTGAGAATCGAGATTCGGTC-AACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATA----ANANATA----GTTAAT
gi|1 : TGTTGTTCTATTGATTCG--TG---CCC-CT-AAGA--TGCGA-AATTCACGCAT----GC----AC--AATAT------CTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-TAAAAAATC-TAAGTGTAACGCATACAAGCAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATAATAC----ATC------TCATAACCACCCATGACCATTAAAATC--ATG--AACACGCTTTCTCATTGAT---TCGTCCTC-TCTTATTGGTTGCT--A----AAATA---T---C---C-AC-AATG-AGGAA-------GTCCAGG-GCCGATAC-----TATACTGTTCCACAA--TAA-TTT-AGGA-TA-T-T-A-CC-TGTGTATTAAATG-TTTT---ATA---G-----AT-----GG---TTTC--A------CTATTTAATATCA-T-TTTTAGCGCATTTT--GTACCTGACAACCAT-GAAAA-AG--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTAAT--ACAC-AT--G--GAAAAGTTTATTGCATTAAGAATGATGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATAGCTGGAGGCCATATAAATACTT-TGG-AAAAAA-TTGCACTTTATTTCATTCTT---AATAGGGCGGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-TGTTATTGATGTTTT-T-GATTGACCTTTA-TTAAATTGAC-------CAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATCATCA-AGCGTCC-AGAATGTACCGCAGACATTTTT-CTA-TTGGTTCTGT--ACTTGGGAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGAAATA---------C-TTGTG----AT-------------TTCTTT---------GGGGTAGTT-------------A----ATA----------------CCTGTG--TT--TTT-CACA---TTT-TT-C--TT--G---GTTTTACGTAAGAATCGAGATTCCGTC-AGCAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCCCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATA----ATAAATA----ACTAAT
gi|10 : ATT--T--CAG---ATGTTG-----CC-AT-------AGTATA--AAAA-TTATTGGT--ACACTATTGG--TATAA--TTATTG------GAATTTTGGTTTGGGTCACC-TTAGTAGGATC-T-TATA----ATATCTCAAGGCCATAGAAGCACTT-TGG-ATAAAA-TTGCACTAAATTTCACACTT---AACAGGGCTACCTTCAAACAGACTA-AAGACACAGATACAC-ACGCGA--GCGCAAGTACACAC-----ATGTTATTGATGTTTTATATATTattgtaccagagtaaaaaagc
gi|10 : ccag----ATA----------------CCTGTT--TA--TTT-CACA---TTT-TTTC--TT--G---GCTTAACATGAGAATTGAAATTCGTTT-AACATTTTGTACAATATCAAAATG--------CTATGA-ATA--G-CATA-TGA--GCATGGAATTTA---TGCA-GTTGTAGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGAGAGTA----ttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtagaggggacaaatcaatgagaaggaacgaatctatgagagtatgtccgcata
gi|11 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatatattttataaattactcatcatCATCAAAATGTTAC----ATTAAATTTTTATAAGCAGTCTCTATCATCGAAATT--CTG--TAAAGGCTTTCTCATTGGT---TCATCCTC-TCTGATTGG-TGCT-AA----AAGTA---T---C---A-GC-AATA-TGGAAT------CTCCAGG---CAGTACT----TTTACTGTTCGGTG----AA-GCT-ACAAGTA-T-T-C-CCTTATGAATTAGATACTTTT---TTG---G-----CT-----GA---CAAA--A------CTGTTTTAAATTA-TGTTTGAACGGGTTTT--TT--CTAAGTGTT-------C-AA--TAACAAAAAT------AA---ATGTTT-----T--A------ACAGT-T----AAAATT--T--------C-AT--G--AAAAAGTtgtccgcata
gi|11 : aAACTTCTACAATAACCGGACA--------CAACAA-ATA--GTTAAG-CGA--GCATGGAATACA---TAGG-ATTCTTAA--CGACTGAATC-ATAAAAAGGAATGAATC-AAAAGAATA----AAGCATA----acatctaacattttaccgagtatagttcatgaaacttctacaataaccggacacaacaaatagttaagcgagcatggaatacataggattcttaacgactgaatcataaaaaggaatgaatcaaaagaataaagcata
gi|12 : acatcaaaatgttacattaaatttttataagcagtctctatcatcgaaattctgtaaaggctttctcattggttcatcctctctgattggtgctaaaagtatcagcaatatggaatctccaggcagtacttttactgttcggtgaagctacaagtattcccttatgaattagatacttttttggctgacaaaactgttttaaattatgtttgaacgggttttttctaagtgttcaataacaaaaataaatgttttaacagttaaaatttcatgaaaaagtacatctaacattttaccgagtatagttcatgaTGATGTTCTGTTGATTCA---G---CCCGCT-AAGG--TG-GACAATCCACACATATATGC----GC--TCTAT------TTGC---TGCATATTTCTGCCACCAGATTT-------CA---TAT-TCA----ATA-ACATAAATC-TAATGGTTACAAACACAAACAATAAAC-ATC-AAGAAACAAATATG--ACTCCATCATAATATTACATAAATT------TCATAGGCGATCTCGATCATAAAAATC--AAG---TAATGCTTCCTCATTGATACCTCACCCCCATCC--CTGTTTGCTATATTAGAAATAGCCT---C---C-AT-TATA-GGAAT-------CACCA---GCCAGT-----------TTGTC--------TA----T-AGGA-TA-T-T-T-CCGTATGTATTAGATC-TTTTTTGTTA---A-----AC-----AA------A--A------CAATTC-ATATTA-T-GTTTA
gi|13 : cGAATACAAACAACAAGA-A-T-ATTAGACATATGTGAT------------TACAAC----ATT------TCATAAGTAGTCCCAATAATCCAAATT--CTG--TAAAAGCTTTCTCGCTGAT---TCATCCCC-TCTAACTGTTTGCT-AA----TAATA---TCTGC---C-AT-TATG-TGGA---------TCCTCA-ATCAGTA---------------CAGCA----AA-TTT---------T-C-C-TC-TG----TTACATG--CTT---TTG---G-----CC-----AG------C--A--------ATCTA---------TTTTAATGAATTAT--TTAATTGACCACTAT--AAAA-AA--TAA---AGTT--T--TAA---------------CAAT-TAAAATATTATG--AAAAA------GT--ACAT-AT--taatgtcttttct
gi|13 : A-ATA--GTTGCA-TAG--TCATGGAATCTG---CGAG-GTTATCGAGGGGAC-GAATtttattttacatttttcagaatatatttttctgtgaccatgaaatagttgcatagtcatggaatctgcgaggttatcgaggggacgaat
gi|14 : gaatacaaacaacaagaatattagacatatgtgattacaacatttcataagtagtcccaataatccaaattctgtaaaagctttctcgctgattcatcccctctaactgtttgctaataatatctgccattatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaTCAAAATC--CTG--TAAACGCTTACACATTGAT---TCATTCCC-TCTGATTGGTTGAT-------AATTA---T---CCTTC-AT-TATG-GGAAT-------CACCAG----CTATAC-----TAAACTGTTCTGCAAAGGAA---T-AAGA-TA-T-T-T-CTGTATGTATTAGATG-TTTT---TTG---G-----CC-----GGCAATCTC-----------GTTT-ATATTA-TGGTTTAACAAGTTTT--CTAGTTGTTTACTAC-GAAAA-AAT-TAACA-AATT--T--TAATAGATG---------C-A------ATGTCATG--AAAAAGTACCTGT--ACAT-AT--
gi|14 : ----ATA----------------CCCGGTAGTA--TTT-TATA---TTT-TC-C--GT--G---CAATTGT-TGATGATTAAAAATTGTCC-AAGAACTTGTACAATATCCAGACA--------CAATGA-ATA--G--GTG-CAATGGCATGGAATacccggtagtattttatattttccgtgcaattgttgatgattaaaaattgtccaagaacttgtacaatatccagacacaatgaataggtgcaatggcatggaatt
gi|15 : tcaaaatcctgtaaacgcttacacattgattcattccctctgattggttgataattatccttcattatgggaatcaccagctatactaaactgttctgcaaaggaataagatatttctgtatgtattagatgttttttggccggcaatctcgtttatattatggtttaacaagttttctagttgtttactacgaaaaaattaacaaattttaatagatgcaatgtcatgaaaaagtacctgtacatTTGATCCG--TG---CCC-AT-AAAA--TGCAA-GAGACGCGCAT----GC----AT--GTTAT------TTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TAA----AAA-ACAAAAATC-TAAGT-------ACACAAGCAATAAAA-ATT-AACAAACAGAACTGTTATTCCAGC-----ATTGC----A-----------TAACCAGGCTTGACCATCGAAATT--ATGTAAAAA---------------------------TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-TATG-GGGAAAGGACCCATCCAGGTACCAGTAC-----TATACAGTTTGACCA--AAA-TTT-CGGA-TA---------------ATTGA----CTTT---TTA---G-----AC-----AG---TTTC--A------t
gi|16 : C----AC--GCTAT------TTAC---CGCATATTTCTGCCACCATATTT-------CA---TAT-TCA----A----CAACAA---------------ACACAAACAATAAAA-CCA-AACATACGAAAATAGGATTACAACAAAATATTAG----ATT------T
gi|16 : TTTCTCATCGAT---CCATCCCC-TCTATTTGCTTTAC-TA----AAACA---T---C---C-TCTAGTATAGGAT-------CTCCA---TCCAGTATATCTATATACTTTTTGGCAA---GG-TAT-AAGC-T--T-T-C-CT-TGTGTATGCAA---TTTT---TTC---G-----ACCAACATG---TTT-------------TTTCATATTA-T-tctgtatttttttttaatgtttctcatcgatccatcccctctatttgctttactaaaacatcctctagtataggatctccatccagtatatctatatactttttggcaaggtataagctttccttgtgtatgcaattttttcgaccaacatgttttttcatattatactcaa
gi|17 : cacgctatttaccgcatatttctgccaccatatttcatattcaacaacaaacacaaacaataaaaccaaacatacgaaaataggattacaacaaaatattagattttctgtatttttttttaatgAACTTGTACAGCATCTTGACA--------CAATGA-ATATAGTTACA-CAA--GTATGGAATCCA---CAAG-ATTCTCGAGGGGAC-AAATCAATGAGAAGGAATGAATATATGAAAATactcaa
gi|18 : ataattttcctttttttagtgctaaaacttataataaataatattccagaTTCCC-TCTCATTGGTTACT-AA----ATATA---TCG-C---C-AT-TATG-GGAAT-------CTCCA---GCCAGTAC-----CATTCTGTTTGGCAA--TAG-TAT-ACG--TA-T-T-C-C-------ATTAGATG-TTTT---TTG---G-----CC-----GA------CAAA------CTGTTTGATATTC-TGTTTTAAAGAGTTTT--CTAAGTGTTCACTAT-AAAAA-AAATTAAAAAAATT--TAACAG---CTG-----------A--T---ATATTATG--AAAAAgtagcatatgtgctcttgttatgttacgatttattgagtgttaagaaagttgtaaaggacaagcttatctggagcaagttcccattt
gi|19 : AAATCCTATG--AA--CGCTTT-TCATT-------TGTCCAC-TTTGATTTGTTTGT-AA----AAATA---T---C---CGAC-AAC---------------TCCAG---CTAGTAC-----TTCGTTGTCCAACAA--TAG-TTT-AGGA-GG-T-T-C-CCTTGTGTGTTAGATG-TTTT---ATA---G-----aaaagtattttaccttttgtcatagtata
gi|2 : TCCATAGATTCA--CA---TCC-AA-AAGA--TGTGA-TATTCGCGCAT----GC----GC--ATTAT------CTGC---CCCACATTTCTGCAACCAGATTT-------CA---GAT-TTA----AAT-TAAAAACTC-TGAATGTTACGTATACAAACAATAAAA-AAT-AAAAATCAAAACTGTCATTCCAGCAAGATATTAC----ATT------TTGTAACCTGCCCTGACCGTCAACATC--ATG--AAAATGCTTTCTCATTGAT---TCGTCGCC-TCTGCTTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GAATA-------GTCCAGG-ACCGAAAC-----TATACTGATCTACAA--TAA-TTT-AGGA-TA-T-T-CTCC-TGTGTATTAAATG--TTT---TTA---G-----AT-----GG---TGTC--A------CTATTTAATATT--T-TTTTAGCGCATTTT--CAATCTGACTACTAT-GAGAA-AA--AAACTTAATT--T--CAA---TTGTTT-----TC--------ATAGTATA--AAGAATTAGTTGT--ACAC-AT--GTAAAAAAGTGTATTGCATTAAGAATTATGGTTTGGGTCATC-TTTGTAGATTCATATAGA----ATATCTCAAGGCTATATCAACACTTATGA-AAAAAA--AGGACTTTATTTCACTCTT---AACAGTGCGGCCGTC-------------GACAT--ATACACAACG-GC--GCGC--GCGCGCACAT--TATGTTATTGCCTTTTT-GCAATTGG-CTTTA-TTTAATTCACCATCACACAGTGTTGTTTAAGTTTTCGACGGATAGTATAATCA----------------------AAAATGCACCGCAGACATGTTT-TTG-TTGATTCTGT--ACTTGGGAGTATTTATAAGGGCATTTTTTTTACATTTATTGACAGGAATA---------T-TTGTG----AT-------------TTTTTT---------Gttgctgactgttttaacgagttttccagttattctctggcaaaatttatgaagtattaacagttgaaacacaatcaaaaagta
gi|2 : TATCT-------------T----ATA----------------AGTGTT--TT--TTT-CACA---TTT-TT-C--TT--G---GCTTTACTTGATAATCGAGATTCAGTC-AACAACTTGAACAATATCCGGAAT--------CTACGAGATT--GTCTAG-GGG--ACA---AAT-TA--------AT---------GAC-GA-----------GGAACGAATCTATGAGAATAAGGCATAAATA----GTTtggatcccccccccaccccaaacattacattttatcttataagtgtttttttcacatttttcttggctttacttgataatcgagattcagtcaacaacttgaacaatatccggaatctacgagattgtctaggggacaaattaatgacgaggaacgaatctatgagaataaggcataaatagttgtttttatttacaatgccacaagatgaaaaaagt
gi|20 : tccatagattcacatccaaaagatgtgatattcgcgcatgcgcattatctgccccacatttctgcaaccagatttcagatttaaattaaaaactctgaatgttacgtatacaaacaataaaaaataaaaatcaaaactgtcattccagcaagatattacattttgtaacctgccctgaccgtcaacatcatgaaaatgctttctcattgattcgtcgcctctgcttggttgcttaaaatatccacaatggaatagtccaggaccgaaactatactgatctacaataatttaggatattctcctgtgtattaaatgtttttagatggtgtcactatttaatatttttttagcgcattttcaatctgactactatgagaaaaaaacttaatttcaattgttttcatagtataaagaattagttgtacacatgtaaaaaagtgtattgcattaagaattatggtttgggtcatctttgtagattcatatagaatatctcaaggctatatcaacacttatgaaaaaaaaggactttatttcactcttaacagtgcggccgtcgacatatacacaacggcgcgcgcgcgcacattatgttattgcctttttgcaattggctttatttaattcaccatcacacagtgttgtttaagttttcgacggatagtataatcaaaaatgcaccgcagacatgtttttgttgattctgtacttgggagtatttataagggcattttttttacatttattgacaggaatatttgtgatttttttgtggatcccccccccaccccaaacattacatttTGTTGTTCCATAGATTCA--TC---CCC-CT-AAAG--AGCGT-GATTTATGCAC----GT----TC--GTTAT------GTAC---TGCATATTTCTCCAACCAAATTTTATTTACCA---GATATTA----AACAACAAAAATC-TACATATTCTGAATACGAACAATAAAC-ATT-AAC---C--AACTG-TCTTTCAG-AAGATATCTC----ATT-----------------------CATCAATATA--CTG--TAAAAGCTTTCTCATTGAgtttttatttacaatgccacaagatgaaaaaagt
gi|21 : aTTGGTCTTTAATTGAATTGACCATCACACAGTGCTGCCTAATATTTCGATGGATAGTATAATCAAGGGAGATTATCACAG-ACCA-AGAATACAATGCAGACATTTTTACTATTTGGTTCTGTGAA---GGAAGTGTTTAAAAAGCCA--TGTTTTACATTAAA--AGAGGATAA---------TGTTATG----AT-------------TTTT
gi|22 : TGTTGTTCCGTCAATTCA--TC---CCC-TT-GTGG--TGCAA-GGTTTGTGTAT----GG----TT--GCTAT------TTAC---TGCATATTTCTGCTTCCAAATTT-------CA---TAT-TCA----ACA-ACCAAAATC-TAAGTGTTACAAACACAAACCATTAAT-AATCAACAAACAAATATGTGATTCCAACTCAATATTa
gi|23 : cAATATCTG-------------CACAG-GTA--GTTGCA-CAC--ACATGGAGT-TA---ATAGTATGGTCAAGGGGGC-AAATTGATGAGAAGCAATGAATTAATGAGAATA----AGATATA----
gi|24 : cacttttcttctcttttattttgttggtgtttgatataatgattaacaatcttccaaaaaaggacaaTTGATTCG--TG---CCC-CT-AAAG--TGCGA-GATTCACGTAC----GCGCGTGC--GTTAT------TTGC---CTCATATTTCc
gi|24 : gTCGTCCAGAGGAC-GAATCAATGTAAAGGAACAATTCAGTGAGAAgtccagaggacgaatcaatgtaaaggaacaattcagtgagaaaagggcaaacatcaaatttgagaacaaaaccatatat
gi|25 : gttgattcgtgcccctaaagtgcgagattcacgtacgcgcgtgcgttatttgcctcatattCCATTGATTCATCTGATTCTC-CTGAAGG--TCTGT-GGTTC-----T----GA----GCTGGTTATTTTTTACTACATGTATATATTTCTGCAATCAGATTT-------CATATAAT-TTA----ACA-ATAAAAATC-TATTTGTTACA-----AAACAACAACA-ATC-AACAAAaagggcaaacatcaaatttgagaacaaaaccatatat
gi|26 : AACACAGTT--T--CAA---ATGTTT-----CC----T----TAGTATA--AAATTTTTTTGGT--GCAC-AT--C--AAAAAAATTATTGCATTAAGAATTATTATTTGAGTCATC-TTTGTAGGATTG--TATA----ATGTTTCAAGa
gi|27 : taaGTTCCATTGATTCT--TG---CCG-CT-AAGGGGTACAA-GATTTGCACAT----GT----GC--ATTAT------CTGC---CGCATATTTCTGCAACCAGATCT-------CA---AAT-TTA----AAT-ACAAATATC-TAAGTGTTAtgcat
gi|28 : TGTCTTCCCAT-GATTCA--TC---TCT-CC-AAAG--TTCAT-GATTCGCATAT----GA----AC--ATTAT------TTCC---AGAATATTTCTGCAATTAGATTT-------CC---AAT-TC-----AAC-AACAAAATC-AAAggccataataaa
gi|29 : tTGTTGTTTCATTGAATGG--TG---CAT-CT-TAGA--TGGGA-GATTCACACAT----GC----GA--AT-AT------CTGC---CACATATTTCTGCAACCAGATTT-------CA---GATGTTGCCATAGT-ATAAAAATaattgggatataa
gi|3 : cGTTGTTCCATTGATTT---TG---CCC-CT-TAGA--TGTGA-GATTCGCACAT----GC----AC--ATTAT------CTGC---CTCATATTTCTGCAAC-AGATTT-------CA---AAT-TTA----AAC-C---AAATT-TAAGTGTTACACATAAAAACAATAAAAAAAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCTAAACCAGCCTTGTCTGTCAAAATC--ATG--AAAACAATTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GTCGATAC-----TGTACTGTTCTACAA--TAA-TTT-AGGA-TA-T-TCC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AA-----TG---TTTC--A------CTATTTAATATTA-T-TGTTAGCACATTTT--TAACCTGACCAATAT-T-AAA-AA--TGACATATTT--T--CAA---ATGTTT-----TC--T------TAGTATA--ta
gi|3 : TC-ATTGTAGGATTATATATATGTAATATCTCAAGGCCATATAAACACTT-TGG-AAAAAAATTGCACTTTGTTTCACTCTT---AATGGGGTTGCTGTCATGAGGA-TT-AGGACACAGATACAC-ACACGC--GTGT--GCACACATATAATATGTTATTGATGTTTT-TAGATTGGCCTTTA-TTGAATTGACCAGCATACAGTGTTGCTTAACTTTCCGACGAATAGTATAATCAAAGGAGATAATCA-AGCATCCGAGAATGCAC---AGACATTTTT-TTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTAACTGACAGGAATATTTGTGATTT-TTTTGGAGTAT-------------TTTTTTCTCTCAAACACAATATTT-------------G----ATAAATTACTCATCTTTTATCTGTT--TTTTTTT-CACA---TTT-TT-C--TT--G---GCTTTACATGAGAATCGAGATTCTGTC-AACAACTTATACAATATCTGGATG--------CTACAA-GTA--GTCAAG-CAA--GTATGGAATCTA---CAAG-ATTGTCGAGGAGAC-AAAttcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|30 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatatTCGTCC-AAAAACTTGTACAATATTCGGAC
gi|31 : attattttacattttcagttatacagtctagttgataaataaGTCTAAAAACTTGTACAATATCCAGACA--------CAACAA-TTA--GTTTAG-TGA--GCATGAAATCCACATCGAG-Aatgataaaacttcaataaaggcatg
gi|32 : aggttgatgataaacaataTC-AACAACTTGTACAATATCCGGATG--------CCAAGA-ATA--GTCATG-TGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAT-GAATCAATGAGa
gi|33 : GA--ACATGGAATCCA---CGAA-TTTGTCGAGGGAAC-TTATCGACGAAAAAGAACAGATTGTTGAGAATA----AGACCTA----
gi|35 : aaaatttcaaatATGG-ATA--GTTGGG-CAA--GCACGGTTGCTG---CGAG-ATTCTTGAAGGGCG-GAATCAATGAGAAGGAATGAATCTACGAGAAT
gi|36 : acaACAATATCCGGACG--------CTACGA-ACA--ATCCCA-CGA--GTGCGAAATCCA---CGAG-AGTGTCGAGGGAAC-GAATCAAT
gi|38 : a-AAAAAA---GCATTTTATTTCACTCTTCTTGACTGGACCCCCTTCAAGAGGACTTAAAGACACt
gi|39 : TGTTGTTCCACTGATTCA--TC---CCC-CT-AAGG--TG
gi|4 : tTGTTCCATTGATTCA--TA---CCC-CT-AAGA--TGCGA-GATTCGCACAT----GC----GA--ATTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CC---AAT-TTA----AGT-TTAAAAATCATAAGTGTTACGGATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACTGTCAAAATC--ATG--AAAACACTTTCTCATTGAT---TTGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AA-AATG-GGGAA-------GTCCAGG-TCCAATAC-----TATAATGTTTGACAA--TAA-TTC-AGGA-TA-TCC-C-CC-TGCATATTAAATG-TTCT---TAA---G-----AT-----GG---TTTC--A------C----TAATATTATT-TTTTAGTGCATTTT--GAACTTAACCACTAT-AAAAA-AA--TAACATAACT--T--CAA---ATGTTT-----TC--------ATGGAATA--AAAAACTAGTGGT--AAAC-AA--A--AAAAAGTTTATTGCATTAAGAATTGTGGTTTGTGTCATCATTTGTAGGATCG--TATA----ATATCTCAAGTGCATGTAAACACTT-TGGAAAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCTGTCAAGAGGACTT-AGGACACAGATACAG-ATGCAC--GTGC--ACACA-----------TTATTGACAGTTT-TAAATTAATCTTTA-TTGAATTGACAAGCTCGCAGTATTACTTAACTTTTCG
gi|5 : GTTGTTCCATTGATTCA--TG---CCC-CT-AAGG--TGCTA-GTTTCCCACAT----GC----CC--ATTAA------CTGC---TGCATATTTCTGCAACCAGGTTT-------CA---AAT-TTA----AGT-ACAAAAATC-TAAGTGTTGCGCATACATACAATGAAA-AAT-AACAAACAAAACAGATATTCCAACAAATTATTAC----ATT------TCGTAACATGCCTTGACTGTCCAAATC--AT---AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-AGTG-GGGAA-------GT---GG-GCCGATAT-----TATACTGGTTGAC-A--CAATTTT-AGGA-TATT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GT---TTTC--A------CAATTTAATATTA-T-TTTTAGCGT--------------ACCACTGA-AAAAACAA--CAACAAAATT--T--C-G---TTGTTTTTTTCTC-ATAC---ACAATATATTATAAATTA
gi|5 : -------------A----ATA----------------CCTGTT--TTT-TTT-CACA---TTT-TT-CTTTT--G---GCTTTACATTTGAA--GCGATTCATCC-AACAACTTGTACAATATACGAACG--------CTACGG-ATA--GTTGCG-CGA--GCAGGGAATCTA---CAAG-ATTGTCGAGGGGAT-GAATAAGTGAGAAGAAATGAATCTATGAAATTA----AGGCATAAATTGTTAATctcttgaaatacctgttttttttcacatttttcttttggctttacatttgaagcgattcatccaacaacttgtacaatatacgaacgctacggatagttgcgcgagcagggaatctacaagattgtcgaggggatgaataagtgagaagaaatgaatctatgaaattaaggcataaattgttaatgacaaataaag
gi|6 : gttgttccattgattcatgcccctaaggtgctagtttcccacatgcccattaactgctgcatatttctgcaaccaggtttcaaatttaagtacaaaaatctaagtgttgcgcatacatacaatgaaaaataacaaacaaaacagatattccaacaaattattacatttcgtaacatgccttgactgtccaaatcataaaacgctttctcattgattcgtcccctctgattggttgcttaaaatattcacagtggggaagtgggccgatattatactggttgacacaattttaggatatttccctgtgtattaaatgttttttagacgttttcacaatttaatattatttttagcgtaccactgaaaaaacaacaacaaaatttcgttgtttttttctcatacacaatatattataaattactcttgaTT-----TC-AT-----AT--TATA--AAACATTAGTGTTTAAGAC-AT--G--ACAAAGTTTATTGCATTATAGGTTTTGGTTTTAGTCATC-TTTGTAGGTTTGTGT-TA-----TATCTCAAGGTCATATAAATACTT-TGG-AAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCCTCAAGAGGACTT-AGGACACAGATACAC-ATGTGCATGTGC--GCATATATATAAT-TATTATTGATTTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCATGCAGTGTTGCTTAACTTTTCGACCGATAATATAATAAAGGCAGATAATCA-AGCATCC-AGAATGTACCACAGACATTT---CTG-TTGGTTCTGT--ACTTAGAAGTGTTTAAAAGGAGA--TTTTTTACATTTAATGA--GAAATA---------T-TTGTG----ATTTTGGAGTATTTTTTTTTT---------CAATCATTTTATTTTATTACTCATCTTATA----------------CCTGTC--CT--TTT-CACA---TTT-TC-C--TT--G---GCTTTACATGAGAATCGAGATTCGGTC-AACAAATTGTACAATATCCAGATG--------CTACGA-ATA--GTCGCACCAA--GCAAGGAATCTA---TGAG-ATTGTCGAGGGAAC-AAATCAATGAGAAAGACCGAACCTATGAAAATA----AGGCATgacaaataaag
gi|7 : gaTTGTTCAATTGATTCG--TG---CCC-CC-AAGG--TACGA-GATTTGGGCAT----GC----GC--ATTAT------CTGC---TGCATATCTCTGCAACCTGATTT-------CA---AAT-TTA----AAT-ACAAAAA-C-TAAGTGTTACACATACAAACAATAAAA-GAT-AACAAACAAAACAGATATTCCAG-AAATTATTAC----ATT------TCGAAACCAGCATTGACCGTCGAAACC--ATC--AAAACGTTTTCTCATTGAT---TCGTCCCC-TCTGATT-GTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCTGG-GCCGATGA-----TATACTGTCTGACAA---AA-TTTGAGGA-CA-T-T-CTCC-TGTGTATTAAATG-TTTT---TTA---G-----GT-----GT---TTTC--A------CTATTTAATATTA---ATTTAGCGCATTTT--GAACCTGACCACTGTAAAAAA-AA--TAACATAAT
gi|7 : ATCT-------------T----ATA----------------CATTTT--TT--TTT-CACAATTTTTATT-T--TT--G---GCTTTATGTGAGAATTGAGATTCGGCC-AACAACTTGTACAATATCTTAAAG--------CTATGA-A----------------ACACAGAATCTA---CGAG-ATTGTCAAGGAATC-AAATCAATGAGAAGGAACAAATGTATGAAAATA----AGACATA----aataaaaattcccatacactttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
gi|8 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaacgttttctcattgattcgtcccctctgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttattatttaataactaactcGTTGTTCCAATGATTCA--AG---CTC-CT-AAGG--TGCAA--ATTTGCACAT----CC----GC--ATTAT------CTGC---CACATATTTCTACAACCAGATTT-------CC---AAT-TTA----AAT-ACAAAAATC-TATGTGTTACACATACAAACAATAAAT-AAT-AACAAAGAAAACTGATATTCAAGCAAATTATTCC----ATT------TTGTTACCTGCCTTGACCTTCAAAATC--ATG--AAAACACCTTTTCATTGAT---TC-T--------------TTGCT-CA----AAATA---T---C---C-AC-AATA-GGGAA-------ATCCAGG-GCCGATAA-----TATTCAATTCAACAA--AAA-TTT-ATGA-TA-T-T-C-TC--ATGTATTAAATG-TTTT---TAA---G-----AC-----AT---TTTC--ACTAGATCTATCTAATATTA-C-ATTTAGCGCATTTT--GAACCTGAGCACTAT--AAAA-AA--TAACATAATTAAA--AAA---AAATTC-----TC-AC-T---ATTTTATA--AA
gi|8 : -------------TTTTAT---------AAATTACTC-------------ATC--ATA----------------CCT-----TT--TTC-CATA---TTT-TT-T--TT--TTTTGCTTTACCAGACACTCGAGATTCGGCC-AACAACTTGTACAATATCCGAACG--------CTACGA-ATA--GCCGCG-CGA--GCACGGAATCTA---CAAG-ATAGTCGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGttactcatcatacctttttccatattttttttttttgctttaccagacactcgagattcggccaacaacttgtacaatatccgaacgctacgaatagccgcgcgagcacggaatctacaagatagtcgaggggacaaatcaatgagaaggaacgaatctatg
gi|9 : gttgttccaatgattcaagctcctaaggtgcaaatttgcacatccgcattatctgccacatatttctacaaccagatttccaatttaaatacaaaaatctatgtgttacacatacaaacaataaataataacaaagaaaactgatattcaagcaaattattccattttgttacctgccttgaccttcaaaatcatgaaaacaccttttcattgattctttgctcaaaatatccacaatagggaaatccagggccgataatattcaattcaacaaaaatttatgatattctcatgtattaaatgtttttaagacattttcactagatctatctaatattacatttagcgcattttgaacctgagcactataaaaaataacataattaaaaaaaaattctcactaTCCATTGATTCG--TG---CCC-CA-AAGG--TGTGA-GATTCGTTGAT----GT----GC--ATTAT------CTGC---TGCATATTTCTGAAACCAGATTT-------AA---AGT-TTA----AAT-TCAAAAATC-TAAGTGTTACATAT----ACAATAAAA-AAT-AACA---AAAACTGATATTCAAGCAAATTATTATAA--ATT------TCATAACCTGCCTTGACCATCGAAATC--ATG--AAATCGCTATTTCATTGAT---TCATCCCA-TCTGATTGATTGCT-T-----AAATA---T---C---C-AC-ATTG-AGGAA-------ATCCAGG-GCCGACAA-----TATACTGTTCAACAA--AAA-TTT-AGGA-TA-T-T-C-CTATGTGTATTAAATG-TTGT---TTATACGTTTATAC-----GT---TTTC--A------CTATTTAATATTA-T-TTTTAGCATATTTTTAACACCTGACCCCTAT---AAA-CA--TAA
gi|9 : c----ATA----------------CCTGTT--TT--TTTTCACA---TTT-TT-C--TTTTG---GCTTTATATGGGAATCGAGATTCGCCC-AACAACTTGTACAATATCCGAACACTAATAGTCTATGA-ATA--GTCATG-CGA--GCATGGAtcctctttttttctcatacactatatctttaaattactcttcatatacctgttttttttcacatttttcttttggctttatatgggaatcgagattcgcccaacaacttgtacaatatccgaacactaatagtctatgaatagtcatgcgagcatggact
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34 ): TACAGGATTGCCGAGGGCATGGGTAAGTGAGAAGACATAAATAAATGAAAAGGTGCAAATCAGAAGTGAATGATACATAATC
Unaligned ( gi|37 ): AGTTGATGATAAACAATTGCATAAAAACTTGTACACTATTTGGACACAAAAAATAGTTAAATG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111111111 111111 111 1 11111111111111111111111111111111 11 333333333333333 111 1111 11 111 11111111 11 11 33333333333 1111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111 1111
lowQualScore : 666 333 2 2 33 2 0 5555 4444 444 666666 333 7777777 444 4 5555 555 2 44 2 2 2 4 1 0000 888888 1 2 1 0 2 33 444 0 444 1 2 7777777 444 777 444 2 2 2 666666666 7777 000000 1 000 2 2 2 2 2 2 5 2 2 444 444 44444444444444444444444444444444 2 888 1 8888 1 55 3 77 4 66666 7777 1 999999999999999 0 44 5555 66 4 99999 1 0 5 333 2222 6 5 66 000 1 0 0 5 6 1 99 99 1 99999999 11 6 33 3 6 2 2 2 0 3 8 5 8 3 0 8 8 11 11 1 11 5 44444444444 4444 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 00000 55 99 55 4 777 4 4 55 55 777 8 1 99999999 2 33 44 2 22 3 444 2 2 0 0000
lowQualScore : ... ... . . .. . . .... .... ... ...... ... ....... ... . .... ... . .. . . . . . .... ...... . . . . . .. ... . ... . . ....... ... ... ... . . . ......... .... ...... . ... . . . . . . . . . ... ... ................................ . ... . .... . .. . .. . ..... .... . ............... . .. .... .. . ..... . . . ... .... . . .. ... . . . . . . .. .. . ........ .. . .. . . . . . . . . . . . . . . .. .. . .. . ........... .... .................................................................................................. ..... .. .. .. . ... . . .. .. ... . . ........ . .. .. . .. . ... . . . ....
lowQualScore : 111 999 2 2 11 4 5 0000 7777 222 444444 999 6666666 111 7 0000 000 7 77 7 8 7 6 1 0000 222222 9 0 8 5 7 77 999 5 777 4 5 9999999 444 888 444 5 5 5 666666666 8888 111111 8 999 5 5 5 5 5 5 0 5 5 444 444 33333333333333333333333333333333 6 777 0 9999 8 33 3 99 8 44444 2222 2 888888888888888 8 22 8888 11 4 88888 0 3 7 777 1111 7 7 44 000 7 7 7 7 7 0 22 22 0 55555555 77 7 55 7 7 5 5 2 8 8 0 0 0 2 8 0 0 00 00 4 88 0 00000000000 2222 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 00000 55 55 55 0 000 0 0 55 55 000 0 4 11111111 2 11 22 2 99 7 111 4 4 6 6666
consensus : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA-AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGGAATA---------T-TTGTG----ATTT-------------TTTT------A-------------------A---ANT-A---TTC-------------AT---A---TA----------------CCT-----GTT--TT--T--TT-CACA---TTT-TT-C--TT--G---GCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAGGCATA----GCTAAT
Reference ( family-2272 ) : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA-AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGGAATA---------T-TTGTG----ATTT-------------TTTT------G-------------------A---ANT-A---TTT-------------A----A---TA----------------CCT-----GTT--TT--T--TT-CACA---TTT-TT-C--TT--G---GCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAGACATA----GTTAAT
gi|1 : TGTTGTTCTATTGATTCG--TG---CCC-CT-AAGA--TGCGA-AATTCACGCAT----GC----AC--AATAT------CTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-TAAAAAATC-TAAGTGTAACGCATACAAGCAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATAATAC----ATC------TCATAACCACCCATGACCATTAAAATC--ATG--AACACGCTTTCTCATTGAT---TCGTCCTC-TCTTATTGGTTGCT--A----AAATA---T---C---C-AC-AATG-AGGAA-------GTCCAGG-GCCGATAC-----TATACTGTTCCACAA--TAA-TTT-AGGA-TA-T-T-A-CC-TGTGTATTAAATG-TTTT---ATA---G-----AT-----GG---TTTC--A------CTATTTAATATCA-T-TTTTAGCGCATTTT--GTACCTGACAACCAT-GAAAA-AG--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTAAT--ACAC-AT--G--GAAAAGTTTATTGCATTAAGAATGATGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATAGCTGGAGGCCATATAAATACTT-TGG-AAAAAA-TTGCACTTTATTTCATTCTT---AATAGGGCGGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-T-GTTATTGATGTTTT-T-GATTGACCTTTA-TTAAATTGAC-------CAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATCATCA-AGCGTCC-AGAATGTACCGCAGACATTTTT-CTA-TTGGTTCTGT--ACTTGGGAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGAAATA---------C-TTGTG----ATTT-------------CTTT------G-------------------G---GGT-A---GTT-------------A----A---TA----------------CCT-----GTG--TT--T--TT-CACA---TTT-TT-C--TT--G---GTTTTACGTAAGAATCGAGATTCCGTCAGCAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCCCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAATAAATA----ACTAAT
gi|10 : ATT--T--CAG---ATGTTG-----CC-AT-------AGTATA--AAAA-TTATTGGT--ACACTATTGG--TATAA--TTATTG------GAATTTTGGTTTGGGTCACC-TTAGTAGGATC-T-TATA----ATATCTCAAGGCCATAGAAGCACTT-TGG-ATAAAA-TTGCACTAAATTTCACACTT---AACAGGGCTACCTTCAAACAGACTA-AAGACACAGATACAC-ACGCGA--GCGCAAGTACACAC-----AT-GTTATTGATGTTTTATATATTattgtaccagagtaaaaaagc
gi|10 : ccagTT-------------TTAT------A-------------------A---ATT-A---CTC-------------ATCATA---TA----------------CCT-----GTT--TA--T--TT-CACA---TTT-TTTC--TT--G---GCTTAACATGAGAATTGAAATTCGTTTAACATTTTGTACAATATCAAAATG--------CTATGA-ATA--G-CATA-TGA--GCATGGAATTTA---TGCA-GTTGTAGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGAGAGTAttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtagaggggacaaatcaatgagaaggaacgaatctatgagagtatgtccgcata
gi|11 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatataCATCAAAATGTTAC----ATTAAATTTTTATAAGCAGTCTCTATCATCGAAATT--CTG--TAAAGGCTTTCTCATTGGT---TCATCCTC-TCTGATTGG-TGCT-AA----AAGTA---T---C---A-GC-AATA-TGGAAT------CTCCAGG---CAGTACT----TTTACTGTTCGGTG----AA-GCT-ACAAGTA-T-T-C-CCTTATGAATTAGATACTTTT---TTG---G-----CT-----GA---CAAA--A------CTGTTTTAAATTA-TGTTTGAACGGGTTTT--TT--CTAAGTGTT-------C-AA--TAACAAAAAT------AA---ATGTTT-----T--A------ACAGT-T----AAAATT--T--------C-AT--G--AAAAAGTtgtccgcata
gi|11 : aAACTTCTACAATAACCGGACA--------CAACAA-ATA--GTTAAG-CGA--GCATGGAATACA---TAGG-ATTCTTAA--CGACTGAATC-ATAAAAAGGAATGAATC-AAAAGAATAAAGCATA----acatctaacattttaccgagtatagttcatgaaacttctacaataaccggacacaacaaatagttaagcgagcatggaatacataggattcttaacgactgaatcataaaaaggaatgaatcaaaagaataaagcata
gi|12 : acatcaaaatgttacattaaatttttataagcagtctctatcatcgaaattctgtaaaggctttctcattggttcatcctctctgattggtgctaaaagtatcagcaatatggaatctccaggcagtacttttactgttcggtgaagctacaagtattcccttatgaattagatacttttttggctgacaaaactgttttaaattatgtttgaacgggttttttctaagtgttcaataacaaaaataaatgttttaacagttaaaatttcatgaaaaagtacatctaacattttaccgagtatagttcatgaTGATGTTCTGTTGATTCA---G---CCCGCT-AAGG--TG-GACAATCCACACATATATGC----GC--TCTAT------TTGC---TGCATATTTCTGCCACCAGATTT-------CA---TAT-TCA----ATA-ACATAAATC-TAATGGTTACAAACACAAACAATAAAC-ATC-AAGAAACAAATATG--ACTCCATCATAATATTACATAAATT------TCATAGGCGATCTCGATCATAAAAATC--AAG---TAATGCTTCCTCATTGATACCTCACCCCCATCC--CTGTTTGCTATATTAGAAATAGCCT---C---C-AT-TATA-GGAAT-------CACCA---GCCAGT-----------TTGTC--------TA----T-AGGA-TA-T-T-T-CCGTATGTATTAGATC-TTTTTTGTTA---A-----AC-----AA------A--A------CAATTC-ATATTA-T-GTTTA
gi|13 : cGAATACAAACAACAAGA-A-T-ATTAGACATATGTGAT------------TACAAC----ATT------TCATAAGTAGTCCCAATAATCCAAATT--CTG--TAAAAGCTTTCTCGCTGAT---TCATCCCC-TCTAACTGTTTGCT-AA----TAATA---TCTGC---C-AT-TATG-TGGA---------TCCTCA-ATCAGTA---------------CAGCA----AA-TTT---------T-C-C-TC-TG----TTACATG--CTT---TTG---G-----CC-----AG------C--A--------ATCTA---------TTTTAATGAATTAT--TTAATTGACCACTAT--AAAA-AA--TAA---AGTT--T--TAA---------------CAAT-TAAAATATTATG--AAAAA------GT--ACAT-AT--taatgtcttttct
gi|13 : A-ATA--GTTGCA-TAG--TCATGGAATCTG---CGAG-GTTATCGAGGGGAC-GAATtttattttacatttttcagaatatatttttctgtgaccatgaaatagttgcatagtcatggaatctgcgaggttatcgaggggacgaat
gi|14 : gaatacaaacaacaagaatattagacatatgtgattacaacatttcataagtagtcccaataatccaaattctgtaaaagctttctcgctgattcatcccctctaactgtttgctaataatatctgccattatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaTCAAAATC--CTG--TAAACGCTTACACATTGAT---TCATTCCC-TCTGATTGGTTGAT-------AATTA---T---CCTTC-AT-TATG-GGAAT-------CACCAG----CTATAC-----TAAACTGTTCTGCAAAGGAA---T-AAGA-TA-T-T-T-CTGTATGTATTAGATG-TTTT---TTG---G-----CC-----GGCAATCTC-----------GTTT-ATATTA-TGGTTTAACAAGTTTT--CTAGTTGTTTACTAC-GAAAA-AAT-TAACA-AATT--T--TAATAGATG---------C-A------ATGTCATG--AAAAAGTACCTGT--ACAT-AT--
gi|14 : ----A---TA----------------CCC-----GGTAGTA--T--TT-TATA---TTT-TC-C--GT--G---CAATTGT-TGATGATTAAAAATTGTCCAAGAACTTGTACAATATCCAGACA--------CAATGA-ATA--G--GTG-CAATGGCATGGAATacccggtagtattttatattttccgtgcaattgttgatgattaaaaattgtccaagaacttgtacaatatccagacacaatgaataggtgcaatggcatggaatt
gi|15 : tcaaaatcctgtaaacgcttacacattgattcattccctctgattggttgataattatccttcattatgggaatcaccagctatactaaactgttctgcaaaggaataagatatttctgtatgtattagatgttttttggccggcaatctcgtttatattatggtttaacaagttttctagttgtttactacgaaaaaattaacaaattttaatagatgcaatgtcatgaaaaagtacctgtacatTTGATCCG--TG---CCC-AT-AAAA--TGCAA-GAGACGCGCAT----GC----AT--GTTAT------TTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TAA----AAA-ACAAAAATC-TAAGT-------ACACAAGCAATAAAA-ATT-AACAAACAGAACTGTTATTCCAGC-----ATTGC----A-----------TAACCAGGCTTGACCATCGAAATT--ATGTAAAAA---------------------------TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-TATG-GGGAAAGGACCCATCCAGGTACCAGTAC-----TATACAGTTTGACCA--AAA-TTT-CGGA-TA---------------ATTGA----CTTT---TTA---G-----AC-----AG---TTTC--A------t
gi|16 : C----AC--GCTAT------TTAC---CGCATATTTCTGCCACCATATTT-------CA---TAT-TCA--------ACA---------------ACAAACACAAACAATAAAA-CCA-AACATACGAAAATAGGATTACAACAAAATATTAG----ATT------T
gi|16 : TTTCTCATCGAT---CCATCCCC-TCTATTTGCTTTAC-TA----AAACA---T---C---C-TCTAGTATAGGAT-------CTCCA---TCCAGTATATCTATATACTTTTTGGCAA---GG-TAT-AAGC-T--T-T-C-CT-TGTGTATGCAA---TTTT---TTC---G-----ACCAACATG---TTT-------------TTTCATATTA-T-tctgtatttttttttaatgtttctcatcgatccatcccctctatttgctttactaaaacatcctctagtataggatctccatccagtatatctatatactttttggcaaggtataagctttccttgtgtatgcaattttttcgaccaacatgttttttcatattatactcaa
gi|17 : cacgctatttaccgcatatttctgccaccatatttcatattcaacaacaaacacaaacaataaaaccaaacatacgaaaataggattacaacaaaatattagattttctgtatttttttttaatgCCAGAAACTTGTACAGCATCTTGACA--------CAATGA-ATATAGTTACA-CAA--GTATGGAATCCA---CAAG-ATTCTCGAGGGGAC-AAATCAATGAGAAGGAATGAATATATGAAAATGTAGCATA----actcaa
gi|18 : ataattttcctttttttagtgctaaaacttataataaataatattTTCCC-TCTCATTGGTTACT-AA----ATATA---TCG-C---C-AT-TATG-GGAAT-------CTCCA---GCCAGTAC-----CATTCTGTTTGGCAA--TAG-TAT-ACG--TA-T-T-C-C-------ATTAGATG-TTTT---TTG---G-----CC-----GA------CAAA------CTGTTTGATATTC-TGTTTTAAAGAGTTTT--CTAAGTGTTCACTAT-AAAAA-AAATTAAAAAAATT--TAACAG---CTG-----------A--T---ATATTATG--AAAAAtgtgctcttgttatgttacgatttattgagtgttaagaaagttgtaaaggacaagcttatctggagcaagttcccattt
gi|19 : AAATCCTATG--AA--CGCTTT-TCATT-------TGTCCAC-TTTGATTTGTTTGT-AA----AAATA---T---C---CGAC-AAC---------------TCCAG---CTAGTAC-----TTCGTTGTCCAACAA--TAG-TTT-AGGA-GG-T-T-C-CCTTGTGTGTTAGATG-TTTT---ATA---G-----aaaagtattttaccttttgtcatagtata
gi|2 : TCCATAGATTCA--CA---TCC-AA-AAGA--TGTGA-TATTCGCGCAT----GC----GC--ATTAT------CTGC---CCCACATTTCTGCAACCAGATTT-------CA---GAT-TTA----AAT-TAAAAACTC-TGAATGTTACGTATACAAACAATAAAA-AAT-AAAAATCAAAACTGTCATTCCAGCAAGATATTAC----ATT------TTGTAACCTGCCCTGACCGTCAACATC--ATG--AAAATGCTTTCTCATTGAT---TCGTCGCC-TCTGCTTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GAATA-------GTCCAGG-ACCGAAAC-----TATACTGATCTACAA--TAA-TTT-AGGA-TA-T-T-CTCC-TGTGTATTAAATG--TTT---TTA---G-----AT-----GG---TGTC--A------CTATTTAATATT--T-TTTTAGCGCATTTT--CAATCTGACTACTAT-GAGAA-AA--AAACTTAATT--T--CAA---TTGTTT-----TC--------ATAGTATA--AAGAATTAGTTGT--ACAC-AT--GTAAAAAAGTGTATTGCATTAAGAATTATGGTTTGGGTCATC-TTTGTAGATTCATATAGA----ATATCTCAAGGCTATATCAACACTTATGA-AAAAAA--AGGACTTTATTTCACTCTT---AACAGTGCGGCCGTC-------------GACAT--ATACACAACG-GC--GCGC--GCGCGCACAT--TAT-GTTATTGCCTTTTT-GCAATTGG-CTTTA-TTTAATTCACCATCACACAGTGTTGTTTAAGTTTTCGACGGATAGTATAATCA----------------------AAAATGCACCGCAGACATGTTT-TTG-TTGATTCTGT--ACTTGGGAGTATTTATAAGGGCATTTTTTTTACATTTATTGACAGGAATA---------T-TTGTG----ATTT-------------TTTT------GTGGATCCCCCCCCCACCCCA---AAC-A---TTA-------------C----ATTTTA----------------TCTTATAAGTG--TT--TTTTT-CACA---TTT-TT-C--TT--G---GCTTTACTTGATAATCGAGATTCAGTCAACAACTTGAACAATATCCGGAAT--------CTACGAGATT--GTCTAG-GGG--ACA---AAT-TA--------AT---------GAC-GA-----------GGAACGAATCTATGAGAATAAGGCATA----ttgctgactgttttaacgagttttccagttattctctggcaaaatttatgaagtattaacagttgaaacacaatcaaaaagta
gi|20 : TGTTGTTCCATAGATTCA--TC---CCC-CT-AAAG--AGCGT-GATTTATGCAC----GT----TC--GTTAT------GTAC---TGCATATTTCTCCAACCAAATTTTATTTACCA---GATATTA----AACAACAAAAATC-TACATATTCTGAATACGAACAATAAAC-ATT-AAC---C--AACTG-TCTTTCAG-AAGATATCTC----ATT-----------------------CATCAATATA--CTG--TAAAAGCTTTCTCATTGAaatagttgtttttatttacaatgccacaagatgaaaaaagt
gi|21 : aTTGGTCTTTAATTGAATTGACCATCACACAGTGCTGCCTAATATTTCGATGGATAGTATAATCAAGGGAGATTATCACAG-ACCA-AGAATACAATGCAGACATTTTTACTATTTGGTTCTGTGAA---GGAAGTGTTTAAAAAGCCA--TGTTTTACATTAAA--AGAGGATAA---------TGTTATG----ATTT-------------TT
gi|22 : TGTTGTTCCGTCAATTCA--TC---CCC-TT-GTGG--TGCAA-GGTTTGTGTAT----GG----TT--GCTAT------TTAC---TGCATATTTCTGCTTCCAAATTT-------CA---TAT-TCA----ACA-ACCAAAATC-TAAGTGTTACAAACACAAACCATTAAT-AATCAACAAACAAATATGTGATTCCAACTCAATATTa
gi|23 : cAATATCTG-------------CACAG-GTA--GTTGCA-CAC--ACATGGAGT-TA---ATAGTATGGTCAAGGGGGC-AAATTGATGAGAAGCAATGAATTAATGAGAATAAGATATA----
gi|24 : cacttttcttctcttttattttgttggtgtttgatataatgattaacaatcttccaaaaaaggacaaTTGATTCG--TG---CCC-CT-AAAG--TGCGA-GATTCACGTAC----GCGCGTGC--GTTAT------TTGC---CTCATATTTCc
gi|24 : gTCGTCCAGAGGAC-GAATCAATGTAAAGGAACAATTCAGTGAGAAAAGGGCAgtccagaggacgaatcaatgtaaaggaacaattcagtgagaaaagggcaaacatcaaatttgagaacaaaaccatatat
gi|25 : gttgattcgtgcccctaaagtgcgagattcacgtacgcgcgtgcgttatttgcctcatattCCATTGATTCATCTGATTCTC-CTGAAGG--TCTGT-GGTTC-----T----GA----GCTGGTTATTTTTTACTACATGTATATATTTCTGCAATCAGATTT-------CATATAAT-TTA----ACA-ATAAAAATC-TATTTGTTACA-----AAACAACAACA-ATC-AACAAAaacatcaaatttgagaacaaaaccatatat
gi|26 : AACACAGTT--T--CAA---ATGTTT-----CC----T----TAGTATA--AAATTTTTTTGGT--GCAC-AT--C--AAAAAAATTATTGCATTAAGAATTATTATTTGAGTCATC-TTTGTAGGATTG--TATA----ATGTTTCAAGa
gi|27 : taaGTTCCATTGATTCT--TG---CCG-CT-AAGGGGTACAA-GATTTGCACAT----GT----GC--ATTAT------CTGC---CGCATATTTCTGCAACCAGATCT-------CA---AAT-TTA----AAT-ACAAATATC-TAAGTGTTAtgcat
gi|28 : TGTCTTCCCAT-GATTCA--TC---TCT-CC-AAAG--TTCAT-GATTCGCATAT----GA----AC--ATTAT------TTCC---AGAATATTTCTGCAATTAGATTT-------CC---AAT-TCA----ACA-ACAAAAggccataataaa
gi|29 : tTGTTGTTTCATTGAATGG--TG---CAT-CT-TAGA--TGGGA-GATTCACACAT----GC----GA--AT-AT------CTGC---CACATATTTCTGCAACCAGATTT-------CA---GATGTTGCCATAGT-ATAAAAATtcaaaaattgggatataa
gi|3 : cGTTGTTCCATTGATTT---TG---CCC-CT-TAGA--TGTGA-GATTCGCACAT----GC----AC--ATTAT------CTGC---CTCATATTTCTGCAAC-AGATTT-------CA---AAT-TTA----AAC--CAAA--TT-TAAGTGTTACACATAAAAACAATAAAAAAAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCTAAACCAGCCTTGTCTGTCAAAATC--ATG--AAAACAATTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GTCGATAC-----TGTACTGTTCTACAA--TAA-TTT-AGGA-TA-T-TCC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AA-----TG---TTTC--A------CTATTTAATATTA-T-TGTTAGCACATTTT--TAACCTGACCAATAT-T-AAA-AA--TGACATATTT--T--CAA---ATGTTT-----TC--T------TAGTATA--ta
gi|3 : TC-ATTGTAGGATTATATATATGTAATATCTCAAGGCCATATAAACACTT-TGG-AAAAAAATTGCACTTTGTTTCACTCTT---AATGGGGTTGCTGTCATGAGGA-TT-AGGACACAGATACAC-ACACGC--GTGT--GCACACATATAATAT-GTTATTGATGTTTT-TAGATTGGCCTTTA-TTGAATTGACCAGCATACAGTGTTGCTTAACTTTCCGACGAATAGTATAATCAAAGGAGATAATCA-AGCATCCGAGAATGCAC---AGACATTTTT-TTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTAACTGACAGGAATATTTGTGATTT-TTTTGGAGTATTT-------------TTTTCTCTCAA-------------------ACACAAT-A---TTT-------------G----A---TAAATTACTCATCTTTTATCT-----GTT--TTTTT--TT-CACA---TTT-TT-C--TT--G---GCTTTACATGAGAATCGAGATTCTGTCAACAACTTATACAATATCTGGATG--------CTACAA-GTA--GTCAAG-CAA--GTATGGAATCTA---CAAG-ATTGTCGAGGAGAC-AAAttcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|30 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatatTCGTCCAAAAACTTGTACAATATTCGGAC
gi|31 : attattttacattttcagttatacagtctagttgataaataaCTAAAAACTTGTACAATATCCAGACA--------CAACAA-TTA--GTTTAG-TGA--GCATGAAATCCACATCGAG-Aatgataaaacttcaataaaggcatg
gi|32 : aggttgatgataaacaatagtCAACAACTTGTACAATATCCGGATG--------CCAAGA-ATA--GTCATG-TGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAT-GAATCAATGAGa
gi|33 : tGA--ACATGGAATCCA---CGAA-TTTGTCGAGGGAAC-TTATCGACGAAAAAGAACAGATTGTTGAGAATAAGACCTA----
gi|35 : aaaatttcaaatATGG-ATA--GTTGGG-CAA--GCACGGTTGCTG---CGAG-ATTCTTGAAGGGCG-GAATCAATGAGAAGGAATGAATCTACGAGAAT
gi|36 : acaACAATATCCGGACG--------CTACGA-ACA--ATCCCA-CGA--GTGCGAAATCCA---CGAG-AGTGTCGAGGGAAC-GAATCAAT
gi|38 : a-AAAAAA---GCATTTTATTTCACTCTTCTTGACTGGACCCCCTTCAAGAGGACTTAAAGACACt
gi|39 : TGTTGTTCCACTGATTCA--TC---CCC-CT-AAGG--TG
gi|4 : tTGTTCCATTGATTCA--TA---CCC-CT-AAGA--TGCGA-GATTCGCACAT----GC----GA--ATTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CC---AAT-TTA----AGT-TTAAAAATCATAAGTGTTACGGATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACTGTCAAAATC--ATG--AAAACACTTTCTCATTGAT---TTGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AA-AATG-GGGAA-------GTCCAGG-TCCAATAC-----TATAATGTTTGACAA--TAA-TTC-AGGA-TA-TCC-C-CC-TGCATATTAAATG-TTCT---TAA---G-----AT-----GG---TTTC--A------C----TAATATTATT-TTTTAGTGCATTTT--GAACTTAACCACTAT-AAAAA-AA--TAACATAACT--T--CAA---ATGTTT-----TC--------ATGGAATA--AAAAACTAGTGGT--AAAC-AA--A--AAAAAGTTTATTGCATTAAGAATTGTGGTTTGTGTCATCATTTGTAGGATCG--TATA----ATATCTCAAGTGCATGTAAACACTT-TGGAAAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCTGTCAAGAGGACTT-AGGACACAGATACAG-ATGCAC--GTGC--ACACA------------TTATTGACAGTTT-TAAATTAATCTTTA-TTGAATTGACAAGCTCGCAGTATTACTTAACTTTTCG
gi|5 : GTTGTTCCATTGATTCA--TG---CCC-CT-AAGG--TGCTA-GTTTCCCACAT----GC----CC--ATTAA------CTGC---TGCATATTTCTGCAACCAGGTTT-------CA---AAT-TTA----AGT-ACAAAAATC-TAAGTGTTGCGCATACATACAATGAAA-AAT-AACAAACAAAACAGATATTCCAACAAATTATTAC----ATT------TCGTAACATGCCTTGACTGTCCAAATC--AT---AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-AGTG-GGGAA-------GT---GG-GCCGATAT-----TATACTGGTTGAC-A--CAATTTT-AGGA-TATT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GT---TTTC--A------CAATTTAATATTA-T-TTTTAGCGT--------------ACCACTGA-AAAAACAA--CAACAAAATT--T--C-G---TTGTTTTTTTCTC-ATAC---ACAATATATTATAAATTA
gi|5 : -------------A----A---TA----------------CCT-----GTT--TTT-T--TT-CACA---TTT-TT-CTTTT--G---GCTTTACATTTGAA--GCGATTCATCCAACAACTTGTACAATATACGAACG--------CTACGG-ATA--GTTGCG-CGA--GCAGGGAATCTA---CAAG-ATTGTCGAGGGGAT-GAATAAGTGAGAAGAAATGAATCTATGAAATTAAGGCATAAATTGTTAATctcttgaaatacctgttttttttcacatttttcttttggctttacatttgaagcgattcatccaacaacttgtacaatatacgaacgctacggatagttgcgcgagcagggaatctacaagattgtcgaggggatgaataagtgagaagaaatgaatctatgaaattaaggcataaattgttaatgacaaataaag
gi|6 : gttgttccattgattcatgcccctaaggtgctagtttcccacatgcccattaactgctgcatatttctgcaaccaggtttcaaatttaagtacaaaaatctaagtgttgcgcatacatacaatgaaaaataacaaacaaaacagatattccaacaaattattacatttcgtaacatgccttgactgtccaaatcataaaacgctttctcattgattcgtcccctctgattggttgcttaaaatattcacagtggggaagtgggccgatattatactggttgacacaattttaggatatttccctgtgtattaaatgttttttagacgttttcacaatttaatattatttttagcgtaccactgaaaaaacaacaacaaaatttcgttgtttttttctcatacacaatatattataaattactcttgaTT-----TC-AT-----AT--TATA--AAACATTAGTGTTTAAGAC-AT--G--ACAAAGTTTATTGCATTATAGGTTTTGGTTTTAGTCATC-TTTGTAGGTTTGTGT-TA-----TATCTCAAGGTCATATAAATACTT-TGG-AAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCCTCAAGAGGACTT-AGGACACAGATACAC-ATGTGCATGTGC--GCATATATAT--AATTATTATTGATTTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCATGCAGTGTTGCTTAACTTTTCGACCGATAATATAATAAAGGCAGATAATCA-AGCATCC-AGAATGTACCACAGACATTT---CTG-TTGGTTCTGT--ACTTAGAAGTGTTTAAAAGGAGA--TTTTTTACATTTAATGA--GAAATA---------T-TTGTG----ATTTTGGAGTATTTTTTTTTT------C-------------------A---ATC-A---TTTTATTTTATTACTCATCTTA---TA----------------CCT-----GTC--CT--T--TT-CACA---TTT-TC-C--TT--G---GCTTTACATGAGAATCGAGATTCGGTCAACAAATTGTACAATATCCAGATG--------CTACGA-ATA--GTCGCACCAA--GCAAGGAATCTA---TGAG-ATTGTCGAGGGAAC-AAATCAATGAGAAAGACCGAACCTATGAAAATAAGGCATgacaaataaag
gi|7 : gaTTGTTCAATTGATTCG--TG---CCC-CC-AAGG--TACGA-GATTTGGGCAT----GC----GC--ATTAT------CTGC---TGCATATCTCTGCAACCTGATTT-------CA---AAT-TTA----AAT-ACAAAAA-C-TAAGTGTTACACATACAAACAATAAAA-GAT-AACAAACAAAACAGATATTCCAG-AAATTATTAC----ATT------TCGAAACCAGCATTGACCGTCGAAACC--ATC--AAAACGTTTTCTCATTGAT---TCGTCCCC-TCTGATT-GTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCTGG-GCCGATGA-----TATACTGTCTGACAA---AA-TTTGAGGA-CA-T-T-CTCC-TGTGTATTAAATG-TTTT---TTA---G-----GT-----GT---TTTC--A------CTATTTAATATTA---ATTTAGCGCATTTT--GAACCTGACCACTGTAAAAAA-AA--TAACATAAT
gi|7 : -------------------A---ACTCA---TCT-------------T----A---TA----------------CAT-----TTT--TT--T--TT-CACAATTTTTATT-T--TT--G---GCTTTATGTGAGAATTGAGATTCGGCCAACAACTTGTACAATATCTTAAAG--------CTATGA-A----------------ACACAGAATCTA---CGAG-ATTGTCAAGGAATC-AAATCAATGAGAAGGAACAAATGTATGAAAATAAGACATA----aataaaaattcccatacactttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
gi|8 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaacgttttctcattgattcgtcccctctgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttattatttaataactGTTGTTCCAATGATTCA--AG---CTC-CT-AAGG--TGCAA--ATTTGCACAT----CC----GC--ATTAT------CTGC---CACATATTTCTACAACCAGATTT-------CC---AAT-TTA----AAT-ACAAAAATC-TATGTGTTACACATACAAACAATAAAT-AAT-AACAAAGAAAACTGATATTCAAGCAAATTATTCC----ATT------TTGTTACCTGCCTTGACCTTCAAAATC--ATG--AAAACACCTTTTCATTGAT---TC-T--------------TTGCT-CA----AAATA---T---C---C-AC-AATA-GGGAA-------ATCCAGG-GCCGATAA-----TATTCAATTCAACAA--AAA-TTT-ATGA-TA-T-T-C-TC--ATGTATTAAATG-TTTT---TAA---G-----AC-----AT---TTTC--ACTAGATCTATCTAATATTA-C-ATTTAGCGCATTTT--GAACCTGAGCACTAT--AAAA-AA--TAACATAATTAAA--AAA---AAATTC-----TC-AC-T---ATTTTATA--AA
gi|8 : TT-------------TTAT------A-------------------A---ATT-A---CTC-------------ATC--A---TA----------------CCT----------TT--T--TC-CATA---TTT-TT-T--TT--TTTTGCTTTACCAGACACTCGAGATTCGGCCAACAACTTGTACAATATCCGAACG--------CTACGA-ATA--GCCGCG-CGA--GCACGGAATCTA---CAAG-ATAGTCGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGttactcatcatacctttttccatattttttttttttgctttaccagacactcgagattcggccaacaacttgtacaatatccgaacgctacgaatagccgcgcgagcacggaatctacaagatagtcgaggggacaaatcaatgagaaggaacgaatctatg
gi|9 : gttgttccaatgattcaagctcctaaggtgcaaatttgcacatccgcattatctgccacatatttctacaaccagatttccaatttaaatacaaaaatctatgtgttacacatacaaacaataaataataacaaagaaaactgatattcaagcaaattattccattttgttacctgccttgaccttcaaaatcatgaaaacaccttttcattgattctttgctcaaaatatccacaatagggaaatccagggccgataatattcaattcaacaaaaatttatgatattctcatgtattaaatgtttttaagacattttcactagatctatctaatattacatttagcgcattttgaacctgagcactataaaaaataacataattaaaaaaaaattctcactaTCCATTGATTCG--TG---CCC-CA-AAGG--TGTGA-GATTCGTTGAT----GT----GC--ATTAT------CTGC---TGCATATTTCTGAAACCAGATTT-------AA---AGT-TTA----AAT-TCAAAAATC-TAAGTGTTACATAT----ACAATAAAA-AAT-AACA---AAAACTGATATTCAAGCAAATTATTATAA--ATT------TCATAACCTGCCTTGACCATCGAAATC--ATG--AAATCGCTATTTCATTGAT---TCATCCCA-TCTGATTGATTGCT-T-----AAATA---T---C---C-AC-ATTG-AGGAA-------ATCCAGG-GCCGACAA-----TATACTGTTCAACAA--AAA-TTT-AGGA-TA-T-T-C-CTATGTGTATTAAATG-TTGT---TTATACGTTTATAC-----GT---TTTC--A------CTATTTAATATTA-T-TTTTAGCATATTTTTAACACCTGACCCCTAT---AAA-CA--TAA
gi|9 : c----ATAT-------------CTTT------A-------------------A---ATT-ACTCTTC-------------AT---A---TA----------------CCT-----GTT--TT--T--TTTCACA---TTT-TT-C--TTTTG---GCTTTATATGGGAATCGAGATTCGCCCAACAACTTGTACAATATCCGAACACTAATAGTCTATGA-ATA--GTCATG-CGA--GCATGGAtcctctttttttctcatacactatatctttaaattactcttcatatacctgttttttttcacatttttcttttggctttatatgggaatcgagattcgcccaacaacttgtacaatatccgaacactaatagtctatgaatagtcatgcgagcatggact
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34 ): TACAGGATTGCCGAGGGCATGGGTAAGTGAGAAGACATAAATAAATGAAAAGGTGCAAATCAGAAGTGAATGATACATAATC
Unaligned ( gi|37 ): AGTTGATGATAAACAATTGCATAAAAACTTGTACACTATTTGGACACAAAAAATAGTTAAATG
Alignments
lowQualScore : 1111 111111111 111111 111 1 11111111111111111111111111111111 11 333333333333333 111 1111 11 111 11111111 11 66666666666666666666666666666666666666666666666666666666666666666666666666666666 1
lowQualScore : 666 333 2 2 33 2 0 5555 4444 444 666666 333 7777777 444 4 5555 555 2 44 2 2 2 4 1 0000 888888 1 2 1 0 2 33 444 0 444 1 2 7777777 444 777 444 2 2 2 666666666 7777 000000 1 000 2 2 2 2 2 2 5 2 2 444 444 44444444444444444444444444444444 2 888 1 8888 1 55 3 77 4 66666 7777 1 999999999999999 0 44 5555 66 4 99999 1 0 5 333 2222 6 5 66 000 1 0 0 5 6 1 99 99 1 99999999 11 6 33 3 6 2 2 2 0 3 8 5 8 5 0 8 8 11 77 77 2 5 0 4 5 0 33333333333333333333333333333333333333333333333333333333333333333333333333333333 666 55 88 3 666 3 3 55 55 666 0 1 4 99999999 2 33 44 2 22 3 444 2 2 0 666 6
lowQualScore : ... ... . . .. . . .... .... ... ...... ... ....... ... . .... ... . .. . . . . . .... ...... . . . . . .. ... . ... . . ....... ... ... ... . . . ......... .... ...... . ... . . . . . . . . . ... ... ................................ . ... . .... . .. . .. . ..... .... . ............... . .. .... .. . ..... . . . ... .... . . .. ... . . . . . . .. .. . ........ .. . .. . . . . . . . . . . . . . . .. .. .. . . . . . . ................................................................................ ... .. .. . ... . . .. .. ... . . . ........ . .. .. . .. . ... . . . ... .
lowQualScore : 111 999 2 2 11 4 5 0000 7777 222 444444 999 6666666 111 7 0000 000 7 77 7 8 7 6 1 0000 222222 9 0 8 5 7 77 999 5 777 4 5 9999999 444 888 444 5 5 5 666666666 8888 111111 8 999 5 5 5 5 5 5 0 5 5 444 444 33333333333333333333333333333333 6 777 0 9999 8 33 3 99 8 44444 2222 2 888888888888888 8 22 8888 11 4 88888 0 3 7 777 1111 7 7 44 000 7 7 7 7 7 0 22 22 0 55555555 77 7 55 7 7 5 5 2 8 8 0 0 0 0 8 0 0 00 99 99 7 0 7 0 7 7 55555555555555555555555555555555555555555555555555555555555555555555555555555555 444 00 66 6 444 6 6 00 00 444 9 2 6 11111111 2 11 22 2 99 7 111 4 4 6 444 0
consensus : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA-AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTA--CATTNAATGACAGGAATAT-TTGTGATTT--------------TT-----TTA-------------------A------------ATTA---CT-CA--------TC--AT---ACCTGTT--TT--TTT-CACA---TTT-TT-C--TT--G---GCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAAT
Reference ( family-2272 ) : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA-AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTA--CATTTAATGACAGGAATAT-TTGTGATTT--------------TT-----TTA-------------------A------------ANTA---TT-CA--------T---AT---ACCTGTT--TT--TTT-CACA---TTT-TT-C--TT--G---GCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAGCTAAT
gi|1 : TGTTGTTCTATTGATTCG--TG---CCC-CT-AAGA--TGCGA-AATTCACGCAT----GC----AC--AATAT------CTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-TAAAAAATC-TAAGTGTAACGCATACAAGCAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATAATAC----ATC------TCATAACCACCCATGACCATTAAAATC--ATG--AACACGCTTTCTCATTGAT---TCGTCCTC-TCTTATTGGTTGCT--A----AAATA---T---C---C-AC-AATG-AGGAA-------GTCCAGG-GCCGATAC-----TATACTGTTCCACAA--TAA-TTT-AGGA-TA-T-T-A-CC-TGTGTATTAAATG-TTTT---ATA---G-----AT-----GG---TTTC--A------CTATTTAATATCA-T-TTTTAGCGCATTTT--GTACCTGACAACCAT-GAAAA-AG--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTAAT--ACAC-AT--G--GAAAAGTTTATTGCATTAAGAATGATGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATAGCTGGAGGCCATATAAATACTT-TGG-AAAAAA-TTGCACTTTATTTCATTCTT---AATAGGGCGGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-T-GTTATTGATGTTTT-T-GATTGACCTTTA-TTAAATTGAC-------CAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATCATCA-AGCGTCC-AGAATGTACCGCAGACATTTTT-CTA-TTGGTTCTGT--ACTTGGGAGTGTTTAAAAGGGCA--TTTTTTA--CATTTAATGACAGAAATAC-TTGTGATTT--------------CT-----TTG-------------------G------------GGTA---GT-TA------------AT---ACCTGTG--TT--TTT-CACA---TTT-TT-C--TT--G---GTTTTACGTAAGAATCGAGATTCCGTCAGCAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCCCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAT---AAATAACTAAT
gi|10 : ATT--T--CAG---ATGTTG-----CC-AT-------AGTATA--AAAA-TTATTGGT--ACACTATTGG--TATAA--TTATTG------GAATTTTGGTTTGGGTCACC-TTAGTAGGATC-T-TATA----ATATCTCAAGGCCATAGAAGCACTT-TGG-ATAAAA-TTGCACTAAATTTCACACTT---AACAGGGCTACCTTCAAACAGACTA-AAGACACAGATACAC-ACGCGA--GCGCAAGTACACAC-----AT-GTTATTGATGTTTTATATATTattgtaccagagtaaaaaagc
gi|10 : ccagTT--------------TT-----ATA-------------------A------------ATTA---CT-CA--------TCATAT---ACCTGTT--TA--TTT-CACA---TTT-TTTC--TT--G---GCTTAACATGAGAATTGAAATTCGTTTAACATTTTGTACAATATCAAAATG--------CTATGA-ATA--G-CATA-TGA--GCATGGAATTTA---TGCA-GTTGTAGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGAGAGTATGTCCGCATAttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtagaggggacaaatcaatgagaaggaacgaatctatgagagtatgtccgcata
gi|11 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatataCATCAAAATGTTAC----ATTAAATTTTTATAAGCAGTCTCTATCATCGAAATT--CTG--TAAAGGCTTTCTCATTGGT---TCATCCTC-TCTGATTGG-TGCT-AA----AAGTA---T---C---A-GC-AATA-TGGAAT------CTCCAGG---CAGTACT----TTTACTGTTCGGTG----AA-GCT-ACAAGTA-T-T-C-CCTTATGAATTAGATACTTTT---TTG---G-----CT-----GA---CAAA--A------CTGTTTTAAATTA-TGTTTGAACGGGTTTT--TT--CTAAGTGTT-------C-AA--TAACAAAAAT------AA---ATGTTT-----T--A------ACAGT-T----AAAATT--T--------C-AT--G--AAAAAGT
gi|11 : aTGTTTGAACGGGTT--TTTTCTAAGTGTTCAATAACAAAAATAA-ATGT----T--------------TTAACAGTTA-------------------A------------AAT----TT-CA--------T---GA---AAAAGTA--CA--TCT-AACA---TTT-T------------------AC-CGAGTAT--AG-TTCA--TGA-AACTTCTACAATAACCGGACA--------CAACAA-ATA--GTTAAG-CGA--GCATGGAATACA---TAGG-ATTCTTAA--CGACTGAATC-ATAAAAAGGAATGAATC-AAAAGAATAAA---GCATAacatctaacattttaccgagtatagttcatgaaacttctacaataaccggacacaacaaatagttaagcgagcatggaatacataggattcttaacgactgaatcataaaaaggaatgaatcaaaagaataaagcata
gi|12 : acatcaaaatgttacattaaatttttataagcagtctctatcatcgaaattctgtaaaggctttctcattggttcatcctctctgattggtgctaaaagtatcagcaatatggaatctccaggcagtacttttactgttcggtgaagctacaagtattcccttatgaattagatacttttttggctgacaaaactgttttaaattaTGATGTTCTGTTGATTCA---G---CCCGCT-AAGG--TG-GACAATCCACACATATATGC----GC--TCTAT------TTGC---TGCATATTTCTGCCACCAGATTT-------CA---TAT-TCA----ATA-ACATAAATC-TAATGGTTACAAACACAAACAATAAAC-ATC-AAGAAACAAATATG--ACTCCATCATAATATTACATAAATT------TCATAGGCGATCTCGATCATAAAAATC--AAG---TAATGCTTCCTCATTGATACCTCACCCCCATCC--CTGTTTGCTATATTAGAAATAGCCT---C---C-AT-TATA-GGAAT-------CACCA---GCCAGT-----------TTGTC--------TA----T-AGGA-TA-T-T-T-CCGTATGTATTAGATC-TTTTTTGTTA---A-----AC-----AA------A--A------CAATTC-ATATTA-T-GTTTA
gi|13 : cGAATACAAACAACAAGA-A-T-ATTAGACATATGTGAT------------TACAAC----ATT------TCATAAGTAGTCCCAATAATCCAAATT--CTG--TAAAAGCTTTCTCGCTGAT---TCATCCCC-TCTAACTGTTTGCT-AA----TAATA---TCTGC---C-AT-TATG-TGGA---------TCCTCA-ATCAGTA---------------CAGCA----AA-TTT---------T-C-C-TC-TG----TTACATG--CTT---TTG---G-----CC-----AG------C--A--------ATCTA---------TTTTAATGAATTAT--TTAATTGACCACTAT--AAAA-AA--TAA---AGTT--T--TAA---------------CAAT-TAAAATATTATG--AAAAA------GT--ACAT-AT--taatgtcttttct
gi|13 : A-ATA--GTTGCA-TAG--TCATGGAATCTG---CGAG-GTTATCGAGGGGAC-GAATtttattttacatttttcagaatatatttttctgtgaccatgaaatagttgcatagtcatggaatctgcgaggttatcgaggggacgaat
gi|14 : gaatacaaacaacaagaatattagacatatgtgattacaacatttcataagtagtcccaataatccaaattctgtaaaagctttctcgctgattcatcccctctaactgtttgctaataatatctgccattatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaTCAAAATC--CTG--TAAACGCTTACACATTGAT---TCATTCCC-TCTGATTGGTTGAT-------AATTA---T---CCTTC-AT-TATG-GGAAT-------CACCAG----CTATAC-----TAAACTGTTCTGCAAAGGAA---T-AAGA-TA-T-T-T-CTGTATGTATTAGATG-TTTT---TTG---G-----CC-----GGCAATCTC-----------GTTT-ATATTA-TGGTTTAACAAGTTTT--CTAGTTGTTTACTAC-GAAAA-AAT-TAACA-AATT--T--TAATAGATG---------C-A------ATGTCATG--AAAAAGTACCTGT--ACAT-AT--
gi|14 : -CA--------T---AT---ACCCGGTAGTA--TTT-TATA---TTT-TC-C--GT--G---CAATTGT-TGATGATTAAAAATTGTCCAAGAACTTGTACAATATCCAGACA--------CAATGA-ATA--G--GTG-CAATGGCATGGAATacccggtagtattttatattttccgtgcaattgttgatgattaaaaattgtccaagaacttgtacaatatccagacacaatgaataggtgcaatggcatggaatt
gi|15 : tcaaaatcctgtaaacgcttacacattgattcattccctctgattggttgataattatccttcattatgggaatcaccagctatactaaactgttctgcaaaggaataagatatttctgtatgtattagatgttttttggccggcaatctcgtttatattatggtttaacaagttttctagttgtttactacgaaaaaattaacaaattttaatagatgcaatgtcatgaaaaagtacctgtaTTGATCCG--TG---CCC-AT-AAAA--TGCAA-GAGACGCGCAT----GC----AT--GTTAT------TTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TAA----AAA-ACAAAAATC-TAAGT-------ACACAAGCAATAAAA-ATT-AACAAACAGAACTGTTATTCCAGC-----ATTGC----A-----------TAACCAGGCTTGACCATCGAAATT--ATGTAAAAA---------------------------TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-TATG-GGGAAAGGACCCATCCAGGTACCAGTAC-----TATACAGTTTGACCA--AAA-TTT-CGGA-TA---------------ATTGA----CTTT---TTA---G-----AC-----AG---TTTC--A------t
gi|16 : C----AC--GCTAT------TTAC---CGCATATTTCTGCCACCATATTT-------CA---TAT-TCA--------ACA---------------ACAAACACAAACAATAAAA-CCA-AACATACGAAAATAGGATTACAACAAAATATTAG----ATT------T
gi|16 : TTTCTCATCGAT---CCATCCCC-TCTATTTGCTTTAC-TA----AAACA---T---C---C-TCTAGTATAGGAT-------CTCCA---TCCAGTATATCTATATACTTTTTGGCAA---GG-TAT-AAGC-T--T-T-C-CT-TGTGTATGCAA---TTTT---TTC---G-----ACCAACATG---TTT-------------TTTCATATTA-T-tctgtatttttttttaatgtttctcatcgatccatcccctctatttgctttactaaaacatcctctagtataggatctccatccagtatatctatatactttttggcaaggtataagctttccttgtgtatgcaattttttcgaccaacatgttttttcatattatactcaa
gi|17 : cacgctatttaccgcatatttctgccaccatatttcatattcaacaacaaacacaaacaataaaaccaaacatacgaaaataggattacaacaaaatattagattttctgtatttttttttaatgCCAGAAACTTGTACAGCATCTTGACA--------CAATGA-ATATAGTTACA-CAA--GTATGGAATCCA---CAAG-ATTCTCGAGGGGAC-AAATCAATGAGAAGGAATGAATATATGAAAATGTA---GCATAactcaa
gi|18 : ataattttcctttttttagtgctaaaacttataataaataatattTTCCC-TCTCATTGGTTACT-AA----ATATA---TCG-C---C-AT-TATG-GGAAT-------CTCCA---GCCAGTAC-----CATTCTGTTTGGCAA--TAG-TAT-ACG--TA-T-T-C-C-------ATTAGATG-TTTT---TTG---G-----CC-----GA------CAAA------CTGTTTGATATTC-TGTTTTAAAGAGTTTT--CTAAGTGTTCACTAT-AAAAA-AAATTAAAAAAATT--TAACAG---CTG-----------A--T---ATATTATG--AAAAAtgtgctcttgttatgttacgatttattgagtgttaagaaagttgtaaaggacaagcttatctggagcaagttcccattt
gi|19 : AAATCCTATG--AA--CGCTTT-TCATT-------TGTCCAC-TTTGATTTGTTTGT-AA----AAATA---T---C---CGAC-AAC---------------TCCAG---CTAGTAC-----TTCGTTGTCCAACAA--TAG-TTT-AGGA-GG-T-T-C-CCTTGTGTGTTAGATG-TTTT---ATA---G-----aaaagtattttaccttttgtcatagtata
gi|2 : TCCATAGATTCA--CA---TCC-AA-AAGA--TGTGA-TATTCGCGCAT----GC----GC--ATTAT------CTGC---CCCACATTTCTGCAACCAGATTT-------CA---GAT-TTA----AAT-TAAAAACTC-TGAATGTTACGTATACAAACAATAAAA-AAT-AAAAATCAAAACTGTCATTCCAGCAAGATATTAC----ATT------TTGTAACCTGCCCTGACCGTCAACATC--ATG--AAAATGCTTTCTCATTGAT---TCGTCGCC-TCTGCTTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GAATA-------GTCCAGG-ACCGAAAC-----TATACTGATCTACAA--TAA-TTT-AGGA-TA-T-T-CTCC-TGTGTATTAAATG--TTT---TTA---G-----AT-----GG---TGTC--A------CTATTTAATATT--T-TTTTAGCGCATTTT--CAATCTGACTACTAT-GAGAA-AA--AAACTTAATT--T--CAA---TTGTTT-----TC--------ATAGTATA--AAGAATTAGTTGT--ACAC-AT--GTAAAAAAGTGTATTGCATTAAGAATTATGGTTTGGGTCATC-TTTGTAGATTCATATAGA----ATATCTCAAGGCTATATCAACACTTATGA-AAAAAA--AGGACTTTATTTCACTCTT---AACAGTGCGGCCGTC-------------GACAT--ATACACAACG-GC--GCGC--GCGCGCACAT--TAT-GTTATTGCCTTTTT-GCAATTGG-CTTTA-TTTAATTCACCATCACACAGTGTTGTTTAAGTTTTCGACGGATAGTATAATCA----------------------AAAATGCACCGCAGACATGTTT-TTG-TTGATTCTGT--ACTTGGGAGTATTTATAAGGGCATTTTTTTTA--CATTTATTGACAGGAATAT-TTGTGATTT--------------TT-----TTGTGGATCCCCCCCCCACCCCA------------AACA---TTACATTTTATCTT---AT---AAGTGTT--TT--TTT-CACA---TTT-TT-C--TT--G---GCTTTACTTGATAATCGAGATTCAGTCAACAACTTGAACAATATCCGGAAT--------CTACGAGATT--GTCTAG-GGG--ACA---AAT-TA--------AT---------GAC-GA-----------GGAACGAATCTATGAGAATAAG---GCATAttgctgactgttttaacgagttttccagttattctctggcaaaatttatgaagtattaacagttgaaacacaatcaaaaagta
gi|20 : TGTTGTTCCATAGATTCA--TC---CCC-CT-AAAG--AGCGT-GATTTATGCAC----GT----TC--GTTAT------GTAC---TGCATATTTCTCCAACCAAATTTTATTTACCA---GATATTA----AACAACAAAAATC-TACATATTCTGAATACGAACAATAAAC-ATT-AAC---C--AACTG-TCTTTCAG-AAGATATCTC----ATT-----------------------CATCAATATA--CTG--TAAAAGCTTTCTCATTGAaatagttgtttttatttacaatgccacaagatgaaaaaagt
gi|21 : aTTGGTCTTTAATTGAATTGACCATCACACAGTGCTGCCTAATATTTCGATGGATAGTATAATCAAGGGAGATTATCACAG-ACCA-AGAATACAATGCAGACATTTTTACTATTTGGTTCTGTGAA---GGAAGTGTTTAAAAAGCCA--TGTTTTA--CATTAAA--AGAGGATAATGTTATGATTT--------------TT-----
gi|22 : TGTTGTTCCGTCAATTCA--TC---CCC-TT-GTGG--TGCAA-GGTTTGTGTAT----GG----TT--GCTAT------TTAC---TGCATATTTCTGCTTCCAAATTT-------CA---TAT-TCA----ACA-ACCAAAATC-TAAGTGTTACAAACACAAACCATTAAT-AATCAACAAACAAATATGTGATTCCAACTCAATATTa
gi|23 : cAATATCTG-------------CACAG-GTA--GTTGCA-CAC--ACATGGAGT-TA---ATAGTATGGTCAAGGGGGC-AAATTGATGAGAAGCAATGAATTAATGAGAATAAG---ATATA
gi|24 : cacttttcttctcttttattttgttggtgtttgatataatgattaacaatcttccaaaaaaggacaaTTGATTCG--TG---CCC-CT-AAAG--TGCGA-GATTCACGTAC----GCGCGTGC--GTTAT------TTGC---CTCATATTTCc
gi|24 : gTCGTCCAGAGGAC-GAATCAATGTAAAGGAACAATTCAGTGAGAAAAGG---GCAgtccagaggacgaatcaatgtaaaggaacaattcagtgagaaaagggcaaacatcaaatttgagaacaaaaccatatat
gi|25 : gttgattcgtgcccctaaagtgcgagattcacgtacgcgcgtgcgttatttgcctcatattCCATTGATTCATCTGATTCTC-CTGAAGG--TCTGT-GGTTC-----T----GA----GCTGGTTATTTTTTACTACATGTATATATTTCTGCAATCAGATTT-------CATATAAT-TTA----ACA-ATAAAAATC-TATTTGTTACA-----AAACAACAACA-ATC-AACAAAaacatcaaatttgagaacaaaaccatatat
gi|26 : AACACAGTT--T--CAA---ATGTTT-----CC----T----TAGTATA--AAATTTTTTTGGT--GCAC-AT--C--AAAAAAATTATTGCATTAAGAATTATTATTTGAGTCATC-TTTGTAGGATTG--TATA----ATGTTTCAAGa
gi|27 : taaGTTCCATTGATTCT--TG---CCG-CT-AAGGGGTACAA-GATTTGCACAT----GT----GC--ATTAT------CTGC---CGCATATTTCTGCAACCAGATCT-------CA---AAT-TTA----AAT-ACAAATATC-TAAGTGTTAtgcat
gi|28 : TGTCTTCCCAT-GATTCA--TC---TCT-CC-AAAG--TTCAT-GATTCGCATAT----GA----AC--ATTAT------TTCC---AGAATATTTCTGCAATTAGATTT-------CC---AAT-TCA----ACA-ACAAAAggccataataaa
gi|29 : tTGTTGTTTCATTGAATGG--TG---CAT-CT-TAGA--TGGGA-GATTCACACAT----GC----GA--AT-AT------CTGC---CACATATTTCTGCAACCAGATTT-------CA---GATGTTGCCATAGT-ATAAAAATtcaaaaattgggatataa
gi|3 : cGTTGTTCCATTGATTT---TG---CCC-CT-TAGA--TGTGA-GATTCGCACAT----GC----AC--ATTAT------CTGC---CTCATATTTCTGCAAC-AGATTT-------CA---AAT-TTA----AAC--CAAA--TT-TAAGTGTTACACATAAAAACAATAAAAAAAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCTAAACCAGCCTTGTCTGTCAAAATC--ATG--AAAACAATTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GTCGATAC-----TGTACTGTTCTACAA--TAA-TTT-AGGA-TA-T-TCC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AA-----TG---TTTC--A------CTATTTAATATTA-T-TGTTAGCACATTTT--TAACCTGACCAATAT-T-AAA-AA--TGACATATTT--T--CAA---ATGTTT-----TC--T------TAGTATA--ta
gi|3 : TC-ATTGTAGGATTATATATATGTAATATCTCAAGGCCATATAAACACTT-TGG-AAAAAAATTGCACTTTGTTTCACTCTT---AATGGGGTTGCTGTCATGAGGA-TT-AGGACACAGATACAC-ACACGC--GTGT--GCACACATATAATAT-GTTATTGATGTTTT-TAGATTGGCCTTTA-TTGAATTGACCAGCATACAGTGTTGCTTAACTTTCCGACGAATAGTATAATCAAAGGAGATAATCA-AGCATCCGAGAATGCA---CAGACATTTTT-TTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTA--CATTAACTGACAGGAATAT-TTGTGATTT--------------TT-----TTG-------------------G------------AGTA---TT-ttcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|3 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatatGAGTA--TTTTTTT--CTCTCAA--ACAC-AATAT-TTG--AT-------------------------A-------------------A------------ATTA---CT-CA--------T---CTTTTATCTGTT--TTTTTTT-CACA---TTT-TT-C--TT--G---GCTTTACATGAGAATCGAGATTCTGTCAACAACTTATACAATATCTGGATG--------CTACAA-GTA--GTCAAG-CAA--GTATGGAATCTA---CAAG-ATTGTCGAGGAGAC-AAAtttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|30 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatattcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttgTCGTCCAAAAACTTGTACAATATTCGGAC
gi|31 : attattttacattttcagttatacagtctagttgataaataaCTAAAAACTTGTACAATATCCAGACA--------CAACAA-TTA--GTTTAG-TGA--GCATGAAATCCACATCGAG-Aatgataaaacttcaataaaggcatg
gi|32 : aggttgatgataaacaatagtCAACAACTTGTACAATATCCGGATG--------CCAAGA-ATA--GTCATG-TGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAT-GAATCAATGAGa
gi|33 : tGA--ACATGGAATCCA---CGAA-TTTGTCGAGGGAAC-TTATCGACGAAAAAGAACAGATTGTTGAGAATAAG---ACCTA
gi|35 : aaaatttcaaatATGG-ATA--GTTGGG-CAA--GCACGGTTGCTG---CGAG-ATTCTTGAAGGGCG-GAATCAATGAGAAGGAATGAATCTACGAGAAT
gi|36 : acaACAATATCCGGACG--------CTACGA-ACA--ATCCCA-CGA--GTGCGAAATCCA---CGAG-AGTGTCGAGGGAAC-GAATCAAT
gi|38 : a-AAAAAA---GCATTTTATTTCACTCTTCTTGACTGGACCCCCTTCAAGAGGACTTAAAGACACt
gi|39 : TGTTGTTCCACTGATTCA--TC---CCC-CT-AAGG--TG
gi|4 : tTGTTCCATTGATTCA--TA---CCC-CT-AAGA--TGCGA-GATTCGCACAT----GC----GA--ATTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CC---AAT-TTA----AGT-TTAAAAATCATAAGTGTTACGGATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACTGTCAAAATC--ATG--AAAACACTTTCTCATTGAT---TTGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AA-AATG-GGGAA-------GTCCAGG-TCCAATAC-----TATAATGTTTGACAA--TAA-TTC-AGGA-TA-TCC-C-CC-TGCATATTAAATG-TTCT---TAA---G-----AT-----GG---TTTC--A------C----TAATATTATT-TTTTAGTGCATTTT--GAACTTAACCACTAT-AAAAA-AA--TAACATAACT--T--CAA---ATGTTT-----TC--------ATGGAATA--AAAAACTAGTGGT--AAAC-AA--A--AAAAAGTTTATTGCATTAAGAATTGTGGTTTGTGTCATCATTTGTAGGATCG--TATA----ATATCTCAAGTGCATGTAAACACTT-TGGAAAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCTGTCAAGAGGACTT-AGGACACAGATACAG-ATGCAC--GTGC--ACACA------------TTATTGACAGTTT-TAAATTAATCTTTA-TTGAATTGACAAGCTCGCAGTATTACTTAACTTTTCG
gi|5 : GTTGTTCCATTGATTCA--TG---CCC-CT-AAGG--TGCTA-GTTTCCCACAT----GC----CC--ATTAA------CTGC---TGCATATTTCTGCAACCAGGTTT-------CA---AAT-TTA----AGT-ACAAAAATC-TAAGTGTTGCGCATACATACAATGAAA-AAT-AACAAACAAAACAGATATTCCAACAAATTATTAC----ATT------TCGTAACATGCCTTGACTGTCCAAATC--AT---AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-AGTG-GGGAA-------GT---GG-GCCGATAT-----TATACTGGTTGAC-A--CAATTTT-AGGA-TATT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GT---TTTC--A------CAATTTAATATTA-T-TTTTAGCGT--------------ACCACTGA-AAAAACAA--CAACAAAATT--T--C-G---TTGTTTTTTTCTC-ATAC---ACAATATATTATAAATTA
gi|5 : --------------TT-----ATA-------------------A------------ATTA---CT-CT--------TGAAAT---ACCTGTT--TTT-TTT-CACA---TTT-TT-CTTTT--G---GCTTTACATTTGAA--GCGATTCATCCAACAACTTGTACAATATACGAACG--------CTACGG-ATA--GTTGCG-CGA--GCAGGGAATCTA---CAAG-ATTGTCGAGGGGAT-GAATAAGTGAGAAGAAATGAATCTATGAAATTAAG---GCATActcttgaaatacctgttttttttcacatttttcttttggctttacatttgaagcgattcatccaacaacttgtacaatatacgaacgctacggatagttgcgcgagcagggaatctacaagattgtcgaggggatgaataagtgagaagaaatgaatctatgaaattaaggcataaattgttaatgacaaataaag
gi|6 : gttgttccattgattcatgcccctaaggtgctagtttcccacatgcccattaactgctgcatatttctgcaaccaggtttcaaatttaagtacaaaaatctaagtgttgcgcatacatacaatgaaaaataacaaacaaaacagatattccaacaaattattacatttcgtaacatgccttgactgtccaaatcataaaacgctttctcattgattcgtcccctctgattggttgcttaaaatattcacagtggggaagtgggccgatattatactggttgacacaattttaggatatttccctgtgtattaaatgttttttagacgttttcacaatttaatattatttttagcgtaccactgaaaaaacaacaacaaaatttcgttgtttttttctcatacacaatataTT-----TC-AT-----AT--TATA--AAACATTAGTGTTTAAGAC-AT--G--ACAAAGTTTATTGCATTATAGGTTTTGGTTTTAGTCATC-TTTGTAGGTTTGTGT-TA-----TATCTCAAGGTCATATAAATACTT-TGG-AAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCCTCAAGAGGACTT-AGGACACAGATACAC-ATGTGCATGTGC--GCATATATAT--AATTATTATTGATTTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCATGCAGTGTTGCTTAACTTTTCGACCGATAATATAATAAAGGCAGATAATCA-AGCATCC-AGAATGTACCACAGACATTT---CTG-TTGGTTCTGT--ACTTAGAAGTGTTTAAAAGGAGA--TTTTTTA--CATTTAATGA--GAAATAT-TTGTGATTTTGGAGTATTTTTTTTT-----TCA-------------------ATCATTTTATTTTATTA---CT-CA--------TCTTAT---ACCTGTC--CT--TTT-CACA---TTT-TC-C--TT--G---GCTTTACATGAGAATCGAGATTCGGTCAACAAATTGTACAATATCCAGATG--------CTACGA-ATA--GTCGCACCAA--GCAAGGAATCTA---TGAG-ATTGTCGAGGGAAC-AAATCAATGAGAAAGACCGAACCTATGAAAATAAG---GCATaattgttaatgacaaataaag
gi|7 : gaTTGTTCAATTGATTCG--TG---CCC-CC-AAGG--TACGA-GATTTGGGCAT----GC----GC--ATTAT------CTGC---TGCATATCTCTGCAACCTGATTT-------CA---AAT-TTA----AAT-ACAAAAA-C-TAAGTGTTACACATACAAACAATAAAA-GAT-AACAAACAAAACAGATATTCCAG-AAATTATTAC----ATT------TCGAAACCAGCATTGACCGTCGAAACC--ATC--AAAACGTTTTCTCATTGAT---TCGTCCCC-TCTGATT-GTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCTGG-GCCGATGA-----TATACTGTCTGACAA---AA-TTTGAGGA-CA-T-T-CTCC-TGTGTATTAAATG-TTTT---TTA---G-----GT-----GT---TTTC--A------CTATTTAATATTA---ATTTAGCGCATTTT--GAACCTGACCACTGTAAAAAA-AA--TAACATAAT
gi|7 : TT--------------AT-----TTA-------------------ATA----------ACTAA--CT-CA--------TCTTAT---ACATTTT--TT--TTT-CACAATTTTTATT-T--TT--G---GCTTTATGTGAGAATTGAGATTCGGCCAACAACTTGTACAATATCTTAAAG--------CTATGA-A----------------ACACAGAATCTA---CGAG-ATTGTCAAGGAATC-AAATCAATGAGAAGGAACAAATGTATGAAAATAAG---ACATAaataaaaattcccatacactttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
gi|8 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaacgttttctcattgattcgtcccctctgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttaGTTGTTCCAATGATTCA--AG---CTC-CT-AAGG--TGCAA--ATTTGCACAT----CC----GC--ATTAT------CTGC---CACATATTTCTACAACCAGATTT-------CC---AAT-TTA----AAT-ACAAAAATC-TATGTGTTACACATACAAACAATAAAT-AAT-AACAAAGAAAACTGATATTCAAGCAAATTATTCC----ATT------TTGTTACCTGCCTTGACCTTCAAAATC--ATG--AAAACACCTTTTCATTGAT---TC-T--------------TTGCT-CA----AAATA---T---C---C-AC-AATA-GGGAA-------ATCCAGG-GCCGATAA-----TATTCAATTCAACAA--AAA-TTT-ATGA-TA-T-T-C-TC--ATGTATTAAATG-TTTT---TAA---G-----AC-----AT---TTTC--ACTAGATCTATCTAATATTA-C-ATTTAGCGCATTTT--GAACCTGAGCACTAT--AAAA-AA--TAACATAATTAAA--AAA---AAATTC-----TC-AC-T---ATTTTATA--AA
gi|8 : TT--------------TT-----ATA-------------------A------------ATTA---CT-CA--------TC--AT---ACCT-----TT--TTC-CATA---TTT-TT-T--TT--TTTTGCTTTACCAGACACTCGAGATTCGGCCAACAACTTGTACAATATCCGAACG--------CTACGA-ATA--GCCGCG-CGA--GCACGGAATCTA---CAAG-ATAGTCGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGttactcatcatacctttttccatattttttttttttgctttaccagacactcgagattcggccaacaacttgtacaatatccgaacgctacgaatagccgcgcgagcacggaatctacaagatagtcgaggggacaaatcaatgagaaggaacgaatctatg
gi|9 : gttgttccaatgattcaagctcctaaggtgcaaatttgcacatccgcattatctgccacatatttctacaaccagatttccaatttaaatacaaaaatctatgtgttacacatacaaacaataaataataacaaagaaaactgatattcaagcaaattattccattttgttacctgccttgaccttcaaaatcatgaaaacaccttttcattgattctttgctcaaaatatccacaatagggaaatccagggccgataatattcaattcaacaaaaatttatgatattctcatgtattaaatgtttttaagacattttcactagatctatctaatattacatttagcgcattttgaacctgagcactataaaaaataacataattaaaaaaaaattctcactaTCCATTGATTCG--TG---CCC-CA-AAGG--TGTGA-GATTCGTTGAT----GT----GC--ATTAT------CTGC---TGCATATTTCTGAAACCAGATTT-------AA---AGT-TTA----AAT-TCAAAAATC-TAAGTGTTACATAT----ACAATAAAA-AAT-AACA---AAAACTGATATTCAAGCAAATTATTATAA--ATT------TCATAACCTGCCTTGACCATCGAAATC--ATG--AAATCGCTATTTCATTGAT---TCATCCCA-TCTGATTGATTGCT-T-----AAATA---T---C---C-AC-ATTG-AGGAA-------ATCCAGG-GCCGACAA-----TATACTGTTCAACAA--AAA-TTT-AGGA-TA-T-T-C-CTATGTGTATTAAATG-TTGT---TTATACGTTTATAC-----GT---TTTC--A------CTATTTAATATTA-T-TTTTAGCATATTTTTAACACCTGACCCCTAT---AAA-CA--TAA
gi|9 : cATAT--------------CT-----TTA-------------------A------------ATTACTCTT-CA--------T---AT---ACCTGTT--TT--TTTTCACA---TTT-TT-C--TTTTG---GCTTTATATGGGAATCGAGATTCGCCCAACAACTTGTACAATATCCGAACACTAATAGTCTATGA-ATA--GTCATG-CGA--GCATGGAtcctctttttttctcatacactatatctttaaattactcttcatatacctgttttttttcacatttttcttttggctttatatgggaatcgagattcgcccaacaacttgtacaatatccgaacactaatagtctatgaatagtcatgcgagcatggact
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34 ): TACAGGATTGCCGAGGGCATGGGTAAGTGAGAAGACATAAATAAATGAAAAGGTGCAAATCAGAAGTGAATGATACATAATC
Unaligned ( gi|37 ): AGTTGATGATAAACAATTGCATAAAAACTTGTACACTATTTGGACACAAAAAATAGTTAAATG
Alignments
lowQualScore : 1111 111111111 111111 1111 1 11111111111111111111111111111111 11 333333333333333 111 1111 11 111 11111111 11 555555555555555555555555555555555555555555555555555555555 11 11 111
lowQualScore : 666 333 2 2 33 2 0 5555 4444 444 666666 333 7777777 444 4 5555 555 2 44 2 2 2 4 1 0000 888888 1 2 1 0 2 33 444 0 444 1 2 7777777 444 777 444 2 2 2 666666666 7777 000000 1 2222 5 2 2 555 2 2 444 444 44444444444444444444444444444444 2 888 1 8888 1 0 44 555 77 4 66666 7777 1 999999999999999 0 44 5555 66 4 99999 1 0 5 333 2222 6 5 66 000 1 0 0 5 6 1 99 99 1 99999999 11 6 33 3 6 2 2 2 0 3 8 5 8 5 11 8 8 11 99 1 7 3 6 222222222222222222222222222222222222222222222222222222222 777 66 55 55 11 55 99 4 444 4 4 55 55 8 1 99999999 2 33 44 2 22 3 444 2 2 0 666
lowQualScore : ... ... . . .. . . .... .... ... ...... ... ....... ... . .... ... . .. . . . . . .... ...... . . . . . .. ... . ... . . ....... ... ... ... . . . ......... .... ...... . .... . . . ... . . ... ... ................................ . ... . .... . . .. ... .. . ..... .... . ............... . .. .... .. . ..... . . . ... .... . . .. ... . . . . . . .. .. . ........ .. . .. . . . . . . . . . . . .. . . .. .. . . . . ......................................................... ... .. .. .. .. .. .. . ... . . .. .. . . ........ . .. .. . .. . ... . . . ...
lowQualScore : 111 999 2 2 11 4 5 0000 7777 222 444444 999 6666666 111 7 0000 000 7 77 7 8 7 6 1 0000 222222 9 0 8 5 7 77 999 5 777 4 5 9999999 444 888 444 5 5 5 666666666 8888 111111 8 6666 0 5 5 111 5 5 444 444 33333333333333333333333333333333 6 777 0 9999 8 4 00 888 99 8 44444 2222 2 888888888888888 8 22 8888 11 4 88888 0 3 7 777 1111 7 7 44 000 7 7 7 7 7 0 22 22 0 55555555 77 7 55 7 7 5 5 2 8 8 0 0 0 0 44 0 0 00 22 0 3 7 7 111111111111111111111111111111111111111111111111111111111 000 55 55 55 00 55 55 0 000 0 0 55 55 0 4 11111111 2 11 22 2 99 7 111 4 4 6 444
consensus : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAATTT-AGGA-TAT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA---AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAGT
Reference ( family-2272 ) : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAATTT-AGGA-TAT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA---AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAAT
gi|1 : TGTTGTTCTATTGATTCG--TG---CCC-CT-AAGA--TGCGA-AATTCACGCAT----GC----AC--AATAT------CTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-TAAAAAATC-TAAGTGTAACGCATACAAGCAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATAATAC----ATC------TCATAACCACCCATGACCATTAAAATC--ATG--AACACGCTTTCTCATTGAT---TCGTCCTC-TCTTATTGGTTGCT--A----AAATA---T---C---C-AC-AATG-AGGAA-------GTCCAGG-GCCGATAC-----TATACTGTTCCACAA--TAATTT-AGGA-TAT-T-A-CC-TGTGTATTAAATG-TTTT---ATA---G-----AT-----GG---TTTC--A------CTATTTAATATCA-T-TTTTAGCGCATTTT--GTACCTGACAACCAT-GAAAA---AG--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTAAT--ACAC-AT--G--GAAAAGTTTATTGCATTAAGAATGATGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATAGCTGGAGGCCATATAAATACTT-TGG-AAAAAA-TTGCACTTTATTTCATTCTT---AATAGGGCGGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-T-GTTATTGATGTTTT-T-GATTGACCTTTA-TTAAATTGAC-------CAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATCATCA-AGCGTCC-AGAATGTACCGCAGACATTTTT-CTA-TTGGTTCTGT--ACTTGGGAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGAAATAC-TTGTGA--------------TTTCTT--T--------------------GG------------GGTAG---TTA----A--T--A--CCTGTG--TT--TTT-CACA---TTT-TT-C--TT--GGTTTTACGTAAGAATCGAGATTCCGTCAGCAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCCCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAT---AAATAACTAAT
gi|10 : ATT--T--CAG---ATGTTG-----CC-AT-------AGTATA--AAAA-TTATTGGT--ACACTATTGG--TATAA--TTATTG------GAATTTTGGTTTGGGTCACC-TTAGTAGGATC-T-TATA----ATATCTCAAGGCCATAGAAGCACTT-TGG-ATAAAA-TTGCACTAAATTTCACACTT---AACAGGGCTACCTTCAAACAGACTA-AAGACACAGATACAC-ACGCGA--GCGCAAGTACACAC-----AT-GTTATTGATGTTTTATATATTattgtaccagagtaaaaaagc
gi|10 : ccagTTTTA--T--------------------AA------------ATTAC---TCATC--A--T--ATACCTGTT--TA--TTT-CACA---TTT-TTTC--TT--GGCTTAACATGAGAATTGAAATTCGTTTAACATTTTGTACAATATCAAAATG--------CTATGA-ATA--G-CATA-TGA--GCATGGAATTTA---TGCA-GTTGTAGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGAGAGTATGTCCGCATAttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtagaggggacaaatcaatgagaaggaacgaatctatgagagtatgtccgcata
gi|11 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatataCATCAAAATGTTAC----ATTAAATTTTTATAAGCAGTCTCTATCATCGAAATT--CTG--TAAAGGCTTTCTCATTGGT---TCATCCTC-TCTGATTGG-TGCT-AA----AAGTA---T---C---A-GC-AATA-TGGAAT------CTCCAGG---CAGTACT----TTTACTGTTCGGTG----AAGCT-ACAAGTAT-T-C-CCTTATGAATTAGATACTTTT---TTG---G-----CT-----GA---CAAA--A------CTGTTTTAAATTA-TGTTTGAACGGGTTTT--TT--CTAAGTGTT-------C---AA--TAACAAAAAT------AA---ATGTTT-----T--A------ACAGT-T----AAAATT--T--------C-AT--G--AAAAAGT
gi|11 : aAACTTCTACAATAACCGGACA--------CAACAA-ATA--GTTAAG-CGA--GCATGGAATACA---TAGG-ATTCTTAA--CGACTGAATC-ATAAAAAGGAATGAATC-AAAAGAATAAA---GCATAacatctaacattttaccgagtatagttcatgaaacttctacaataaccggacacaacaaatagttaagcgagcatggaatacataggattcttaacgactgaatcataaaaaggaatgaatcaaaagaataaagcata
gi|12 : acatcaaaatgttacattaaatttttataagcagtctctatcatcgaaattctgtaaaggctttctcattggttcatcctctctgattggtgctaaaagtatcagcaatatggaatctccaggcagtacttttactgttcggtgaagctacaagtattcccttatgaattagatacttttttggctgacaaaactgttttaaattatgtttgaacgggttttttctaagtgttcaataacaaaaataaatgttttaacagttaaaatttcatgaaaaagtacatctaacattttaccgagtatagttcatgaTGATGTTCTGTTGATTCA---G---CCCGCT-AAGG--TG-GACAATCCACACATATATGC----GC--TCTAT------TTGC---TGCATATTTCTGCCACCAGATTT-------CA---TAT-TCA----ATA-ACATAAATC-TAATGGTTACAAACACAAACAATAAAC-ATC-AAGAAACAAATATG--ACTCCATCATAATATTACATAAATT------TCATAGGCGATCTCGATCATAAAAATC--AAG---TAATGCTTCCTCATTGATACCTCACCCCCATCC--CTGTTTGCTATATTAGAAATAGCCT---C---C-AT-TATA-GGAAT-------CACCA---GCCAGT-----------TTGTC--------TA---T-AGGA-TAT-T-T-CCGTATGTATTAGATC-TTTTTTGTTA---A-----AC-----AA------A--A------CAATTC-ATATTA-T-GTTTA
gi|13 : cGAATACAAACAACAAGA-A-T-ATTAGACATATGTGAT------------TACAAC----ATT------TCATAAGTAGTCCCAATAATCCAAATT--CTG--TAAAAGCTTTCTCGCTGAT---TCATCCCC-TCTAACTGTTTGCT-AA----TAATA---TCTGC---C-AT-TATG-TGGA---------TCCTCA-ATCAGTA---------------CAGCA----AATTT--------T-C-C-TC-TG----TTACATG--CTT---TTG---G-----CC-----AG------C--A--------ATCTA---------TTTTAATGAATTAT--TTAATTGACCACTAT--AAAA---AA--TAA---AGTT--T--TAA---------------CAAT-TAAAATATTATG--AAAAA------GT--ACAT-AT--taatgtcttttct
gi|13 : A-ATA--GTTGCA-TAG--TCATGGAATCTG---CGAG-GTTATCGAGGGGAC-GAATtttattttacatttttcagaatatatttttctgtgaccatgaaatagttgcatagtcatggaatctgcgaggttatcgaggggacgaat
gi|14 : gaatacaaacaacaagaatattagacatatgtgattacaacatttcataagtagtcccaataatccaaattctgtaaaagctttctcgctgattcatcccctctaactgtttgctaataatatctgccattatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaTCAAAATC--CTG--TAAACGCTTACACATTGAT---TCATTCCC-TCTGATTGGTTGAT-------AATTA---T---CCTTC-AT-TATG-GGAAT-------CACCAG----CTATAC-----TAAACTGTTCTGCAAAGGAA--T-AAGA-TAT-T-T-CTGTATGTATTAGATG-TTTT---TTG---G-----CC-----GGCAATCTC-----------GTTT-ATATTA-TGGTTTAACAAGTTTT--CTAGTTGTTTACTAC-GAAAA---AAT-TAACA-AATT--T--TAATAGATG---------C-A------ATGTCATG--AAAAAGTACCTGT--ACAT-AT--
gi|14 : CAT---A--T--A--CCCGGTAGTA--TTT-TATA---TTT-TC-C--GT--GCAATTGT-TGATGATTAAAAATTGTCCAAGAACTTGTACAATATCCAGACA--------CAATGA-ATA--G--GTG-CAATGGCATGGAATacccggtagtattttatattttccgtgcaattgttgatgattaaaaattgtccaagaacttgtacaatatccagacacaatgaataggtgcaatggcatggaatt
gi|15 : tcaaaatcctgtaaacgcttacacattgattcattccctctgattggttgataattatccttcattatgggaatcaccagctatactaaactgttctgcaaaggaataagatatttctgtatgtattagatgttttttggccggcaatctcgtttatattatggtttaacaagttttctagttgtttactacgaaaaaattaacaaattttaatagatgcaatgtcatgaaaaagtacctgtaTTGATCCG--TG---CCC-AT-AAAA--TGCAA-GAGACGCGCAT----GC----AT--GTTAT------TTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TAA----AAA-ACAAAAATC-TAAGT-------ACACAAGCAATAAAA-ATT-AACAAACAGAACTGTTATTCCAGC-----ATTGC----A-----------TAACCAGGCTTGACCATCGAAATT--ATGTAAAAA---------------------------TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-TATG-GGGAAAGGACCCATCCAGGTACCAGTAC-----TATACAGTTTGACCA--AAATTT-CGGA-TA--------------ATTGA----CTTT---TTA---G-----AC-----AG---TTTC--A------t
gi|16 : C----AC--GCTAT------TTAC---CGCATATTTCTGCCACCATATTT-------CA---TAT-TCA--------ACA---------------ACAAACACAAACAATAAAA-CCA-AACATACGAAAATAGGATTACAACAAAATATTAG----ATT------T
gi|16 : TTTCTCATCGAT---CCATCCCC-TCTATTTGCTTTAC-TA----AAACA---T---C---C-TCTAGTATAGGAT-------CTCCA---TCCAGTATATCTATATACTTTTTGGCAA---GGTAT-AAGC-T-T-T-C-CT-TGTGTATGCAA---TTTT---TTC---G-----ACCAACATG---TTT-------------TTTCATATTA-T-tctgtatttttttttaatgtttctcatcgatccatcccctctatttgctttactaaaacatcctctagtataggatctccatccagtatatctatatactttttggcaaggtataagctttccttgtgtatgcaattttttcgaccaacatgttttttcatattatactcaa
gi|17 : cacgctatttaccgcatatttctgccaccatatttcatattcaacaacaaacacaaacaataaaaccaaacatacgaaaataggattacaacaaaatattagattttctgtatttttttttaatgCCAGAAACTTGTACAGCATCTTGACA--------CAATGA-ATATAGTTACA-CAA--GTATGGAATCCA---CAAG-ATTCTCGAGGGGAC-AAATCAATGAGAAGGAATGAATATATGAAAATGTA---GCATAactcaa
gi|18 : ataattttcctttttttagtgctaaaacttataataaataatattTTCCC-TCTCATTGGTTACT-AA----ATATA---TCG-C---C-AT-TATG-GGAAT-------CTCCA---GCCAGTAC-----CATTCTGTTTGGCAA--TAGTAT-ACG--TAT-T-C-C-------ATTAGATG-TTTT---TTG---G-----CC-----GA------CAAA------CTGTTTGATATTC-TGTTTTAAAGAGTTTT--CTAAGTGTTCACTAT-AAAAA---AAATTAAAAAAATT--TAACAG---CTG-----------A--T---ATATTATG--AAAAAtgtgctcttgttatgttacgatttattgagtgttaagaaagttgtaaaggacaagcttatctggagcaagttcccattt
gi|19 : AAATCCTATG--AA--CGCTTT-TCATT-------TGTCCAC-TTTGATTTGTTTGT-AA----AAATA---T---C---CGAC-AAC---------------TCCAG---CTAGTAC-----TTCGTTGTCCAACAA--TAGTTT-AGGA-GGT-T-C-CCTTGTGTGTTAGATG-TTTT---ATA---G-----aaaagtattttaccttttgtcatagtata
gi|2 : TCCATAGATTCA--CA---TCC-AA-AAGA--TGTGA-TATTCGCGCAT----GC----GC--ATTAT------CTGC---CCCACATTTCTGCAACCAGATTT-------CA---GAT-TTA----AAT-TAAAAACTC-TGAATGTTACGTATACAAACAATAAAA-AAT-AAAAATCAAAACTGTCATTCCAGCAAGATATTAC----ATT------TTGTAACCTGCCCTGACCGTCAACATC--ATG--AAAATGCTTTCTCATTGAT---TCGTCGCC-TCTGCTTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GAATA-------GTCCAGG-ACCGAAAC-----TATACTGATCTACAA--TAATTT-AGGA-TAT-T-CTCC-TGTGTATTAAATG--TTT---TTA---G-----AT-----GG---TGTC--A------CTATTTAATATT--T-TTTTAGCGCATTTT--CAATCTGACTACTAT-GAGAA---AA--AAACTTAATT--T--CAA---TTGTTT-----TC--------ATAGTATA--AAGAATTAGTTGT--ACAC-AT--GTAAAAAAGTGTATTGCATTAAGAATTATGGTTTGGGTCATC-TTTGTAGATTCATATAGA----ATATCTCAAGGCTATATCAACACTTATGA-AAAAAA--AGGACTTTATTTCACTCTT---AACAGTGCGGCCGTC-------------GACAT--ATACACAACG-GC--GCGC--GCGCGCACAT--TAT-GTTATTGCCTTTTT-GCAATTGG-CTTTA-TTTAATTCACCATCACACAGTGTTGTTTAAGTTTTCGACGGATAGTATAATCA----------------------AAAATGCACCGCAGACATGTTT-TTG-TTGATTCTGT--ACTTGGGAGTATTTATAAGGGCATTTTTTTTACATTTATTGACAGGAATAT-TTGTGA--------------TTTTTT--TGTGGATCCCCCCCCCACCCCAAAC----------ATTACATTTTATCTTA--T--A--AGTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACTTGATAATCGAGATTCAGTCAACAACTTGAACAATATCCGGAAT--------CTACGAGATT--GTCTAG-GGG--ACA---AAT-TA--------AT---------GAC-GA-----------GGAACGAATCTATGAGAATAAG---GCATAAATAGTttgctgactgttttaacgagttttccagttattctctggcaaaatttatgaagtattaacagttgaaacacaatcaaaaagta
gi|20 : TGTTGTTCCATAGATTCA--TC---CCC-CT-AAAG--AGCGT-GATTTATGCAC----GT----TC--GTTAT------GTAC---TGCATATTTCTCCAACCAAATTTTATTTACCA---GATATTA----AACAACAAAAATC-TACATATTCTGAATACGAACAATAAAC-ATT-AAC---C--AACTG-TCTTTCAG-AAGATATCTC----ATT-----------------------CATCAATATA--CTG--TAAAAGCTTTCTCATTGAtgtttttatttacaatgccacaagatgaaaaaagt
gi|21 : aTTGGTCTTTAATTGAATTGACCATCACACAGTGCTGCCTAATATTTCGATGGATAGTATAATCAAGGGAGATTATCACAG-ACCA-AGAATACAATGCAGACATTTTTACTATTTGGTTCTGTGAA---GGAAGTGTTTAAAAAGCCA--TGTTTTACATTAAA--AGAGGATAATGTTATGA--------------TTTTT
gi|22 : TGTTGTTCCGTCAATTCA--TC---CCC-TT-GTGG--TGCAA-GGTTTGTGTAT----GG----TT--GCTAT------TTAC---TGCATATTTCTGCTTCCAAATTT-------CA---TAT-TCA----ACA-ACCAAAATC-TAAGTGTTACAAACACAAACCATTAAT-AATCAACAAACAAATATGTGATTCCAACTCAATATTa
gi|23 : cAATATCTG-------------CACAG-GTA--GTTGCA-CAC--ACATGGAGT-TA---ATAGTATGGTCAAGGGGGC-AAATTGATGAGAAGCAATGAATTAATGAGAATAAG---ATATA
gi|24 : cacttttcttctcttttattttgttggtgtttgatataatgattaacaatcttccaaaaaaggacaaTTGATTCG--TG---CCC-CT-AAAG--TGCGA-GATTCACGTAC----GCGCGTGC--GTTAT------TTGC---CTCATATTTCc
gi|24 : gTCGTCCAGAGGAC-GAATCAATGTAAAGGAACAATTCAGTGAGAAAAGG---GCA-AACgtccagaggacgaatcaatgtaaaggaacaattcagtgagaaaagggcaaacatcaaatttgagaacaaaaccatatat
gi|25 : gttgattcgtgcccctaaagtgcgagattcacgtacgcgcgtgcgttatttgcctcatattCCATTGATTCATCTGATTCTC-CTGAAGG--TCTGT-GGTTC-----T----GA----GCTGGTTATTTTTTACTACATGTATATATTTCTGCAATCAGATTT-------CATATAAT-TTA----ACA-ATAAAAATC-TATTTGTTACA-----AAACAACAACA-ATC-AACAAAatcaaatttgagaacaaaaccatatat
gi|26 : AACACAGTT--T--CAA---ATGTTT-----CC----T----TAGTATA--AAATTTTTTTGGT--GCAC-AT--C--AAAAAAATTATTGCATTAAGAATTATTATTTGAGTCATC-TTTGTAGGATTG--TATA----ATGTTTCAAGa
gi|27 : taaGTTCCATTGATTCT--TG---CCG-CT-AAGGGGTACAA-GATTTGCACAT----GT----GC--ATTAT------CTGC---CGCATATTTCTGCAACCAGATCT-------CA---AAT-TTA----AAT-ACAAATATC-TAAGTGTTAtgcat
gi|28 : TGTCTTCCCAT-GATTCA--TC---TCT-CC-AAAG--TTCAT-GATTCGCATAT----GA----AC--ATTAT------TTCC---AGAATATTTCTGCAATTAGATTT-------CC---AAT-TCA----ACA-ACAAAAggccataataaa
gi|29 : tTGTTGTTTCATTGAATGG--TG---CAT-CT-TAGA--TGGGA-GATTCACACAT----GC----GA--AT-AT------CTGC---CACATATTTCTGCAACCAGATTT-------CA---GATGTTGCCATAGT-ATAAAAATtcaaaaattgggatataa
gi|3 : cGTTGTTCCATTGATTT---TG---CCC-CT-TAGA--TGTGA-GATTCGCACAT----GC----AC--ATTAT------CTGC---CTCATATTTCTGCAAC-AGATTT-------CA---AAT-TTA----AAC--CAAA--TT-TAAGTGTTACACATAAAAACAATAAAAAAAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCTAAACCAGCCTTGTCTGTCAAAATC--ATG--AAAACAATTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GTCGATAC-----TGTACTGTTCTACAA--TAATTT-AGGA-TAT-TCC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AA-----TG---TTTC--A------CTATTTAATATTA-T-TGTTAGCACATTTT--TAACCTGACCAATAT-T-AAA---AA--TGACATATTT--T--CAA---ATGTTT-----TC--T------TAGTATA--ta
gi|3 : TC-ATTGTAGGATTATATATATGTAATATCTCAAGGCCATATAAACACTT-TGG-AAAAAAATTGCACTTTGTTTCACTCTT---AATGGGGTTGCTGTCATGAGGA-TT-AGGACACAGATACAC-ACACGC--GTGT--GCACACATATAATAT-GTTATTGATGTTTT-TAGATTGGCCTTTA-TTGAATTGACCAGCATACAGTGTTGCTTAACTTTCCGACGAATAGTATAATCAAAGGAGATAATCA-AGCATCCGAGAATGCA---CAGACATTTTT-TTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTAACTGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------GG------------AGTAT---Tttcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|3 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatatGAGTA--TTTTTTTCTCTCAA--ACAC-AATAT-TTG--A--------------T----------------------------AA------------ATTAC---TCATC--T--TTTA--TCTGTT--TTTTTTT-CACA---TTT-TT-C--TT--GGCTTTACATGAGAATCGAGATTCTGTCAACAACTTATACAATATCTGGATG--------CTACAA-GTA--GTCAAG-CAA--GTATGGAATCTA---CAAG-ATTGTCGAGGAGAC-AAAtttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|30 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatattcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttgTCGTCCAAAAACTTGTACAATATTCGGAC
gi|31 : attattttacattttcagttatacagtctagttgataaataaCTAAAAACTTGTACAATATCCAGACA--------CAACAA-TTA--GTTTAG-TGA--GCATGAAATCCACATCGAG-Aatgataaaacttcaataaaggcatg
gi|32 : aggttgatgataaacaatagtCAACAACTTGTACAATATCCGGATG--------CCAAGA-ATA--GTCATG-TGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAT-GAATCAATGAGa
gi|33 : tGA--ACATGGAATCCA---CGAA-TTTGTCGAGGGAAC-TTATCGACGAAAAAGAACAGATTGTTGAGAATAAG---ACCTA
gi|35 : aaaatttcaaatATGG-ATA--GTTGGG-CAA--GCACGGTTGCTG---CGAG-ATTCTTGAAGGGCG-GAATCAATGAGAAGGAATGAATCTACGAGAAT
gi|36 : acaACAATATCCGGACG--------CTACGA-ACA--ATCCCA-CGA--GTGCGAAATCCA---CGAG-AGTGTCGAGGGAAC-GAATCAAT
gi|38 : a-AAAAAA---GCATTTTATTTCACTCTTCTTGACTGGACCCCCTTCAAGAGGACTTAAAGACACt
gi|39 : TGTTGTTCCACTGATTCA--TC---CCC-CT-AAGG--TG
gi|4 : tTGTTCCATTGATTCA--TA---CCC-CT-AAGA--TGCGA-GATTCGCACAT----GC----GA--ATTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CC---AAT-TTA----AGT-TTAAAAATCATAAGTGTTACGGATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACTGTCAAAATC--ATG--AAAACACTTTCTCATTGAT---TTGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AA-AATG-GGGAA-------GTCCAGG-TCCAATAC-----TATAATGTTTGACAA--TAATTC-AGGA-TATCC-C-CC-TGCATATTAAATG-TTCT---TAA---G-----AT-----GG---TTTC--A------C----TAATATTATT-TTTTAGTGCATTTT--GAACTTAACCACTAT-AAAAA---AA--TAACATAACT--T--CAA---ATGTTT-----TC--------ATGGAATA--AAAAACTAGTGGT--AAAC-AA--A--AAAAAGTTTATTGCATTAAGAATTGTGGTTTGTGTCATCATTTGTAGGATCG--TATA----ATATCTCAAGTGCATGTAAACACTT-TGGAAAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCTGTCAAGAGGACTT-AGGACACAGATACAG-ATGCAC--GTGC--ACACA------------TTATTGACAGTTT-TAAATTAATCTTTA-TTGAATTGACAAGCTCGCAGTATTACTTAACTTTTCG
gi|5 : GTTGTTCCATTGATTCA--TG---CCC-CT-AAGG--TGCTA-GTTTCCCACAT----GC----CC--ATTAA------CTGC---TGCATATTTCTGCAACCAGGTTT-------CA---AAT-TTA----AGT-ACAAAAATC-TAAGTGTTGCGCATACATACAATGAAA-AAT-AACAAACAAAACAGATATTCCAACAAATTATTAC----ATT------TCGTAACATGCCTTGACTGTCCAAATC--AT---AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-AGTG-GGGAA-------GT---GG-GCCGATAT-----TATACTGGTTGACA---CAATTTTAGGA-TAT-TTC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GT---TTTC--A------CAATTTAATATTA-T-TTTTAGCGTA--------------CCACT---GAAAAAACAA--CAACAAAATT--T--C-G---TTGTTTTTTTCTC-ATAC---ACAATATATTATAAATTA
gi|5 : TTA--T--------------------AA------------ATTAC---TCTTG--AAAT--A--CCTGTT--TTT-TTT-CACA---TTT-TT-CTTTT--GGCTTTACATTTGAA--GCGATTCATCCAACAACTTGTACAATATACGAACG--------CTACGG-ATA--GTTGCG-CGA--GCAGGGAATCTA---CAAG-ATTGTCGAGGGGAT-GAATAAGTGAGAAGAAATGAATCTATGAAATTAAG---GCATAActcttgaaatacctgttttttttcacatttttcttttggctttacatttgaagcgattcatccaacaacttgtacaatatacgaacgctacggatagttgcgcgagcagggaatctacaagattgtcgaggggatgaataagtgagaagaaatgaatctatgaaattaaggcataaattgttaatgacaaataaag
gi|6 : gttgttccattgattcatgcccctaaggtgctagtttcccacatgcccattaactgctgcatatttctgcaaccaggtttcaaatttaagtacaaaaatctaagtgttgcgcatacatacaatgaaaaataacaaacaaaacagatattccaacaaattattacatttcgtaacatgccttgactgtccaaatcataaaacgctttctcattgattcgtcccctctgattggttgcttaaaatattcacagtggggaagtgggccgatattatactggttgacacaattttaggatatttccctgtgtattaaatgttttttagacgttttcacaatttaatattatttttagcgtaccactgaaaaaacaacaacaaaatttcgttgtttttttctcatacacaatataTT-----TC-AT-----AT--TATA--AAACATTAGTGTTTAAGAC-AT--G--ACAAAGTTTATTGCATTATAGGTTTTGGTTTTAGTCATC-TTTGTAGGTTTGTGT-TA-----TATCTCAAGGTCATATAAATACTT-TGG-AAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCCTCAAGAGGACTT-AGGACACAGATACAC-ATGTGCATGTGC--GCATATATAT--AATTATTATTGATTTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCATGCAGTGTTGCTTAACTTTTCGACCGATAATATAATAAAGGCAGATAATCA-AGCATCC-AGAATGTACCACAGACA--TTT-CTG-TTGGTTCTGT--ACTTAGAAGTGTTTAAAAGGAGA--TTTTTTACATTTAATG--AGAAATAT-TTGTGATTTTGGAGTATTTTTTTTTT--C--------------------AATCATTTTATTTTATTAC---TCATCTTA--T--A--CCTGTC--CT--TTT-CACA---TTT-TC-C--TT--GGCTTTACATGAGAATCGAGATTCGGTCAACAAATTGTACAATATCCAGATG--------CTACGA-ATA--GTCGCACCAA--GCAAGGAATCTA---TGAG-ATTGTCGAGGGAAC-AAATCAATGAGAAAGACCGAACCTATGAAAATAAG---GCATattgttaatgacaaataaag
gi|7 : gaTTGTTCAATTGATTCG--TG---CCC-CC-AAGG--TACGA-GATTTGGGCAT----GC----GC--ATTAT------CTGC---TGCATATCTCTGCAACCTGATTT-------CA---AAT-TTA----AAT-ACAAAAA-C-TAAGTGTTACACATACAAACAATAAAA-GAT-AACAAACAAAACAGATATTCCAG-AAATTATTAC----ATT------TCGAAACCAGCATTGACCGTCGAAACC--ATC--AAAACGTTTTCTCATTGAT---TCGTCCCC-TCTGATT-GTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCTGG-GCCGATGA-----TATACTGTCTGACAA---AATTTGAGGA-CAT-T-CTCC-TGTGTATTAAATG-TTTT---TTA---G-----GT-----GT---TTTC--A------CTATTTAATATTA---ATTTAGCGCATTTT--GAACCTGACCACTGTAAAAAA---AA--TAACATAAT
gi|7 : A--------------TTATTTAAT--------------------AA------------CTAAC---TCATCTTA--T--A--CATTTT--TT--TTT-CACAATTTTTATT-T--TT--GGCTTTATGTGAGAATTGAGATTCGGCCAACAACTTGTACAATATCTTAAAG--------CTATGA-A----------------ACACAGAATCTA---CGAG-ATTGTCAAGGAATC-AAATCAATGAGAAGGAACAAATGTATGAAAATAAG---ACATAaataaaaattcccatacactttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
gi|8 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaacgttttctcattgattcgtcccctctgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttGTTGTTCCAATGATTCA--AG---CTC-CT-AAGG--TGCAA--ATTTGCACAT----CC----GC--ATTAT------CTGC---CACATATTTCTACAACCAGATTT-------CC---AAT-TTA----AAT-ACAAAAATC-TATGTGTTACACATACAAACAATAAAT-AAT-AACAAAGAAAACTGATATTCAAGCAAATTATTCC----ATT------TTGTTACCTGCCTTGACCTTCAAAATC--ATG--AAAACACCTTTTCATTGAT---TC-T--------------TTGCT-CA----AAATA---T---C---C-AC-AATA-GGGAA-------ATCCAGG-GCCGATAA-----TATTCAATTCAACAA--AAATTT-ATGA-TAT-T-C-TC--ATGTATTAAATG-TTTT---TAA---G-----AC-----AT---TTTC--ACTAGATCTATCTAATATTA-C-ATTTAGCGCATTTT--GAACCTGAGCACTAT--AAAA---AA--TAACATAATTAAA--AAA---AAATTC-----TC-AC-T---ATTTTATA--AA
gi|8 : TTTTA--T--------------------AA------------ATTAC---TCATC--A--T--A--CC---T--TT--TTC-CATATTTTTT-TT-T--TT--TGCTTTACCAGACACTCGAGATTCGGCCAACAACTTGTACAATATCCGAACG--------CTACGA-ATA--GCCGCG-CGA--GCACGGAATCTA---CAAG-ATAGTCGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGttactcatcatacctttttccatattttttttttttgctttaccagacactcgagattcggccaacaacttgtacaatatccgaacgctacgaatagccgcgcgagcacggaatctacaagatagtcgaggggacaaatcaatgagaaggaacgaatctatg
gi|9 : gttgttccaatgattcaagctcctaaggtgcaaatttgcacatccgcattatctgccacatatttctacaaccagatttccaatttaaatacaaaaatctatgtgttacacatacaaacaataaataataacaaagaaaactgatattcaagcaaattattccattttgttacctgccttgaccttcaaaatcatgaaaacaccttttcattgattctttgctcaaaatatccacaatagggaaatccagggccgataatattcaattcaacaaaaatttatgatattctcatgtattaaatgtttttaagacattttcactagatctatctaatattacatttagcgcattttgaacctgagcactataaaaaataacataattaaaaaaaaattctcactaTCCATTGATTCG--TG---CCC-CA-AAGG--TGTGA-GATTCGTTGAT----GT----GC--ATTAT------CTGC---TGCATATTTCTGAAACCAGATTT-------AA---AGT-TTA----AAT-TCAAAAATC-TAAGTGTTACATAT----ACAATAAAA-AAT-AACA---AAAACTGATATTCAAGCAAATTATTATAA--ATT------TCATAACCTGCCTTGACCATCGAAATC--ATG--AAATCGCTATTTCATTGAT---TCATCCCA-TCTGATTGATTGCT-T-----AAATA---T---C---C-AC-ATTG-AGGAA-------ATCCAGG-GCCGACAA-----TATACTGTTCAACAA--AAATTT-AGGA-TAT-T-C-CTATGTGTATTAAATG-TTGT---TTATACGTTTATAC-----GT---TTTC--A------CTATTTAATATTA-T-TTTTAGCATATTTTTAACACCTGACCCCTAT---AAA---CA--TAA
gi|9 : cA--------------TATCTT--T--------------------AA------------ATTAC---TCTTC--A--T--ATACCTGTT--TT--TTTTCACA---TTT-TT-C--TTTTGGCTTTATATGGGAATCGAGATTCGCCCAACAACTTGTACAATATCCGAACACTAATAGTCTATGA-ATA--GTCATG-CGA--GCATGGAtcctctttttttctcatacactatatctttaaattactcttcatatacctgttttttttcacatttttcttttggctttatatgggaatcgagattcgcccaacaacttgtacaatatccgaacactaatagtctatgaatagtcatgcgagcatggact
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34 ): TACAGGATTGCCGAGGGCATGGGTAAGTGAGAAGACATAAATAAATGAAAAGGTGCAAATCAGAAGTGAATGATACATAATC
Unaligned ( gi|37 ): AGTTGATGATAAACAATTGCATAAAAACTTGTACACTATTTGGACACAAAAAATAGTTAAATG
Alignments
lowQualScore : 1111 111111111 111111 1111 1 11111111111111111111111111111111 11 333333333333333 111 1111 11 111 11111111 11 555555555555555555555555555555555555555555555555555555555 11 11 111
lowQualScore : 666 333 2 2 33 2 0 5555 4444 444 666666 333 7777777 444 4 5555 555 2 44 2 2 2 4 1 0000 888888 1 2 1 0 2 33 444 0 444 1 2 7777777 444 777 444 2 2 2 666666666 7777 000000 1 2222 5 2 2 555 2 2 444 444 44444444444444444444444444444444 2 888 1 8888 1 0 44 555 77 4 66666 7777 1 999999999999999 0 44 5555 66 4 99999 1 0 5 333 2222 6 5 66 000 1 0 0 5 6 1 99 99 1 99999999 11 6 33 3 6 2 2 2 0 3 8 5 8 5 11 8 8 11 99 1 7 3 6 222222222222222222222222222222222222222222222222222222222 777 66 55 55 11 55 99 4 444 4 4 55 55 8 1 99999999 2 33 44 2 22 3 444 2 2 0 666
lowQualScore : ... ... . . .. . . .... .... ... ...... ... ....... ... . .... ... . .. . . . . . .... ...... . . . . . .. ... . ... . . ....... ... ... ... . . . ......... .... ...... . .... . . . ... . . ... ... ................................ . ... . .... . . .. ... .. . ..... .... . ............... . .. .... .. . ..... . . . ... .... . . .. ... . . . . . . .. .. . ........ .. . .. . . . . . . . . . . . .. . . .. .. . . . . ......................................................... ... .. .. .. .. .. .. . ... . . .. .. . . ........ . .. .. . .. . ... . . . ...
lowQualScore : 111 999 2 2 11 4 5 0000 7777 222 444444 999 6666666 111 7 0000 000 7 77 7 8 7 6 1 0000 222222 9 0 8 5 7 77 999 5 777 4 5 9999999 444 888 444 5 5 5 666666666 8888 111111 8 6666 0 5 5 111 5 5 444 444 33333333333333333333333333333333 6 777 0 9999 8 4 00 888 99 8 44444 2222 2 888888888888888 8 22 8888 11 4 88888 0 3 7 777 1111 7 7 44 000 7 7 7 7 7 0 22 22 0 55555555 77 7 55 7 7 5 5 2 8 8 0 0 0 0 44 0 0 00 22 0 3 7 7 111111111111111111111111111111111111111111111111111111111 000 55 55 55 00 55 55 0 000 0 0 55 55 0 4 11111111 2 11 22 2 99 7 111 4 4 6 444
consensus : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAATTT-AGGA-TAT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA---AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAGT
Reference ( family-2272 ) : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAATTT-AGGA-TAT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA---AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAGT
gi|1 : TGTTGTTCTATTGATTCG--TG---CCC-CT-AAGA--TGCGA-AATTCACGCAT----GC----AC--AATAT------CTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-TAAAAAATC-TAAGTGTAACGCATACAAGCAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATAATAC----ATC------TCATAACCACCCATGACCATTAAAATC--ATG--AACACGCTTTCTCATTGAT---TCGTCCTC-TCTTATTGGTTGCT--A----AAATA---T---C---C-AC-AATG-AGGAA-------GTCCAGG-GCCGATAC-----TATACTGTTCCACAA--TAATTT-AGGA-TAT-T-A-CC-TGTGTATTAAATG-TTTT---ATA---G-----AT-----GG---TTTC--A------CTATTTAATATCA-T-TTTTAGCGCATTTT--GTACCTGACAACCAT-GAAAA---AG--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTAAT--ACAC-AT--G--GAAAAGTTTATTGCATTAAGAATGATGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATAGCTGGAGGCCATATAAATACTT-TGG-AAAAAA-TTGCACTTTATTTCATTCTT---AATAGGGCGGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-T-GTTATTGATGTTTT-T-GATTGACCTTTA-TTAAATTGAC-------CAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATCATCA-AGCGTCC-AGAATGTACCGCAGACATTTTT-CTA-TTGGTTCTGT--ACTTGGGAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGAAATAC-TTGTGA--------------TTTCTT--T--------------------GG------------GGTAG---TTA----A--T--A--CCTGTG--TT--TTT-CACA---TTT-TT-C--TT--GGTTTTACGTAAGAATCGAGATTCCGTCAGCAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCCCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAT---AAATAACTAAT
gi|10 : ATT--T--CAG---ATGTTG-----CC-AT-------AGTATA--AAAA-TTATTGGT--ACACTATTGG--TATAA--TTATTG------GAATTTTGGTTTGGGTCACC-TTAGTAGGATC-T-TATA----ATATCTCAAGGCCATAGAAGCACTT-TGG-ATAAAA-TTGCACTAAATTTCACACTT---AACAGGGCTACCTTCAAACAGACTA-AAGACACAGATACAC-ACGCGA--GCGCAAGTACACAC-----AT-GTTATTGATGTTTTATATATTattgtaccagagtaaaaaagc
gi|10 : ccagTTTTA--T--------------------AA------------ATTAC---TCATC--A--T--ATACCTGTT--TA--TTT-CACA---TTT-TTTC--TT--GGCTTAACATGAGAATTGAAATTCGTTTAACATTTTGTACAATATCAAAATG--------CTATGA-ATA--G-CATA-TGA--GCATGGAATTTA---TGCA-GTTGTAGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGAGAGTATGTCCGCATAttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtagaggggacaaatcaatgagaaggaacgaatctatgagagtatgtccgcata
gi|11 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatataCATCAAAATGTTAC----ATTAAATTTTTATAAGCAGTCTCTATCATCGAAATT--CTG--TAAAGGCTTTCTCATTGGT---TCATCCTC-TCTGATTGG-TGCT-AA----AAGTA---T---C---A-GC-AATA-TGGAAT------CTCCAGG---CAGTACT----TTTACTGTTCGGTG----AAGCT-ACAAGTAT-T-C-CCTTATGAATTAGATACTTTT---TTG---G-----CT-----GA---CAAA--A------CTGTTTTAAATTA-TGTTTGAACGGGTTTT--TT--CTAAGTGTT-------C---AA--TAACAAAAAT------AA---ATGTTT-----T--A------ACAGT-T----AAAATT--T--------C-AT--G--AAAAAGT
gi|11 : aAACTTCTACAATAACCGGACA--------CAACAA-ATA--GTTAAG-CGA--GCATGGAATACA---TAGG-ATTCTTAA--CGACTGAATC-ATAAAAAGGAATGAATC-AAAAGAATAAA---GCATAacatctaacattttaccgagtatagttcatgaaacttctacaataaccggacacaacaaatagttaagcgagcatggaatacataggattcttaacgactgaatcataaaaaggaatgaatcaaaagaataaagcata
gi|12 : acatcaaaatgttacattaaatttttataagcagtctctatcatcgaaattctgtaaaggctttctcattggttcatcctctctgattggtgctaaaagtatcagcaatatggaatctccaggcagtacttttactgttcggtgaagctacaagtattcccttatgaattagatacttttttggctgacaaaactgttttaaattatgtttgaacgggttttttctaagtgttcaataacaaaaataaatgttttaacagttaaaatttcatgaaaaagtacatctaacattttaccgagtatagttcatgaTGATGTTCTGTTGATTCA---G---CCCGCT-AAGG--TG-GACAATCCACACATATATGC----GC--TCTAT------TTGC---TGCATATTTCTGCCACCAGATTT-------CA---TAT-TCA----ATA-ACATAAATC-TAATGGTTACAAACACAAACAATAAAC-ATC-AAGAAACAAATATG--ACTCCATCATAATATTACATAAATT------TCATAGGCGATCTCGATCATAAAAATC--AAG---TAATGCTTCCTCATTGATACCTCACCCCCATCC--CTGTTTGCTATATTAGAAATAGCCT---C---C-AT-TATA-GGAAT-------CACCA---GCCAGT-----------TTGTC--------TA---T-AGGA-TAT-T-T-CCGTATGTATTAGATC-TTTTTTGTTA---A-----AC-----AA------A--A------CAATTC-ATATTA-T-GTTTA
gi|13 : cGAATACAAACAACAAGA-A-T-ATTAGACATATGTGAT------------TACAAC----ATT------TCATAAGTAGTCCCAATAATCCAAATT--CTG--TAAAAGCTTTCTCGCTGAT---TCATCCCC-TCTAACTGTTTGCT-AA----TAATA---TCTGC---C-AT-TATG-TGGA---------TCCTCA-ATCAGTA---------------CAGCA----AATTT--------T-C-C-TC-TG----TTACATG--CTT---TTG---G-----CC-----AG------C--A--------ATCTA---------TTTTAATGAATTAT--TTAATTGACCACTAT--AAAA---AA--TAA---AGTT--T--TAA---------------CAAT-TAAAATATTATG--AAAAA------GT--ACAT-AT--taatgtcttttct
gi|13 : A-ATA--GTTGCA-TAG--TCATGGAATCTG---CGAG-GTTATCGAGGGGAC-GAATtttattttacatttttcagaatatatttttctgtgaccatgaaatagttgcatagtcatggaatctgcgaggttatcgaggggacgaat
gi|14 : gaatacaaacaacaagaatattagacatatgtgattacaacatttcataagtagtcccaataatccaaattctgtaaaagctttctcgctgattcatcccctctaactgtttgctaataatatctgccattatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaTCAAAATC--CTG--TAAACGCTTACACATTGAT---TCATTCCC-TCTGATTGGTTGAT-------AATTA---T---CCTTC-AT-TATG-GGAAT-------CACCAG----CTATAC-----TAAACTGTTCTGCAAAGGAA--T-AAGA-TAT-T-T-CTGTATGTATTAGATG-TTTT---TTG---G-----CC-----GGCAATCTC-----------GTTT-ATATTA-TGGTTTAACAAGTTTT--CTAGTTGTTTACTAC-GAAAA---AAT-TAACA-AATT--T--TAATAGATG---------C-A------ATGTCATG--AAAAAGTACCTGT--ACAT-AT--
gi|14 : CAT---A--T--A--CCCGGTAGTA--TTT-TATA---TTT-TC-C--GT--GCAATTGT-TGATGATTAAAAATTGTCCAAGAACTTGTACAATATCCAGACA--------CAATGA-ATA--G--GTG-CAATGGCATGGAATacccggtagtattttatattttccgtgcaattgttgatgattaaaaattgtccaagaacttgtacaatatccagacacaatgaataggtgcaatggcatggaatt
gi|15 : tcaaaatcctgtaaacgcttacacattgattcattccctctgattggttgataattatccttcattatgggaatcaccagctatactaaactgttctgcaaaggaataagatatttctgtatgtattagatgttttttggccggcaatctcgtttatattatggtttaacaagttttctagttgtttactacgaaaaaattaacaaattttaatagatgcaatgtcatgaaaaagtacctgtaTTGATCCG--TG---CCC-AT-AAAA--TGCAA-GAGACGCGCAT----GC----AT--GTTAT------TTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TAA----AAA-ACAAAAATC-TAAGT-------ACACAAGCAATAAAA-ATT-AACAAACAGAACTGTTATTCCAGC-----ATTGC----A-----------TAACCAGGCTTGACCATCGAAATT--ATGTAAAAA---------------------------TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-TATG-GGGAAAGGACCCATCCAGGTACCAGTAC-----TATACAGTTTGACCA--AAATTT-CGGA-TA--------------ATTGA----CTTT---TTA---G-----AC-----AG---TTTC--A------t
gi|16 : C----AC--GCTAT------TTAC---CGCATATTTCTGCCACCATATTT-------CA---TAT-TCA--------ACA---------------ACAAACACAAACAATAAAA-CCA-AACATACGAAAATAGGATTACAACAAAATATTAG----ATT------T
gi|16 : TTTCTCATCGAT---CCATCCCC-TCTATTTGCTTTAC-TA----AAACA---T---C---C-TCTAGTATAGGAT-------CTCCA---TCCAGTATATCTATATACTTTTTGGCAA---GGTAT-AAGC-T-T-T-C-CT-TGTGTATGCAA---TTTT---TTC---G-----ACCAACATG---TTT-------------TTTCATATTA-T-tctgtatttttttttaatgtttctcatcgatccatcccctctatttgctttactaaaacatcctctagtataggatctccatccagtatatctatatactttttggcaaggtataagctttccttgtgtatgcaattttttcgaccaacatgttttttcatattatactcaa
gi|17 : cacgctatttaccgcatatttctgccaccatatttcatattcaacaacaaacacaaacaataaaaccaaacatacgaaaataggattacaacaaaatattagattttctgtatttttttttaatgCCAGAAACTTGTACAGCATCTTGACA--------CAATGA-ATATAGTTACA-CAA--GTATGGAATCCA---CAAG-ATTCTCGAGGGGAC-AAATCAATGAGAAGGAATGAATATATGAAAATGTA---GCATAactcaa
gi|18 : ataattttcctttttttagtgctaaaacttataataaataatattTTCCC-TCTCATTGGTTACT-AA----ATATA---TCG-C---C-AT-TATG-GGAAT-------CTCCA---GCCAGTAC-----CATTCTGTTTGGCAA--TAGTAT-ACG--TAT-T-C-C-------ATTAGATG-TTTT---TTG---G-----CC-----GA------CAAA------CTGTTTGATATTC-TGTTTTAAAGAGTTTT--CTAAGTGTTCACTAT-AAAAA---AAATTAAAAAAATT--TAACAG---CTG-----------A--T---ATATTATG--AAAAAtgtgctcttgttatgttacgatttattgagtgttaagaaagttgtaaaggacaagcttatctggagcaagttcccattt
gi|19 : AAATCCTATG--AA--CGCTTT-TCATT-------TGTCCAC-TTTGATTTGTTTGT-AA----AAATA---T---C---CGAC-AAC---------------TCCAG---CTAGTAC-----TTCGTTGTCCAACAA--TAGTTT-AGGA-GGT-T-C-CCTTGTGTGTTAGATG-TTTT---ATA---G-----aaaagtattttaccttttgtcatagtata
gi|2 : TCCATAGATTCA--CA---TCC-AA-AAGA--TGTGA-TATTCGCGCAT----GC----GC--ATTAT------CTGC---CCCACATTTCTGCAACCAGATTT-------CA---GAT-TTA----AAT-TAAAAACTC-TGAATGTTACGTATACAAACAATAAAA-AAT-AAAAATCAAAACTGTCATTCCAGCAAGATATTAC----ATT------TTGTAACCTGCCCTGACCGTCAACATC--ATG--AAAATGCTTTCTCATTGAT---TCGTCGCC-TCTGCTTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GAATA-------GTCCAGG-ACCGAAAC-----TATACTGATCTACAA--TAATTT-AGGA-TAT-T-CTCC-TGTGTATTAAATG--TTT---TTA---G-----AT-----GG---TGTC--A------CTATTTAATATT--T-TTTTAGCGCATTTT--CAATCTGACTACTAT-GAGAA---AA--AAACTTAATT--T--CAA---TTGTTT-----TC--------ATAGTATA--AAGAATTAGTTGT--ACAC-AT--GTAAAAAAGTGTATTGCATTAAGAATTATGGTTTGGGTCATC-TTTGTAGATTCATATAGA----ATATCTCAAGGCTATATCAACACTTATGA-AAAAAA--AGGACTTTATTTCACTCTT---AACAGTGCGGCCGTC-------------GACAT--ATACACAACG-GC--GCGC--GCGCGCACAT--TAT-GTTATTGCCTTTTT-GCAATTGG-CTTTA-TTTAATTCACCATCACACAGTGTTGTTTAAGTTTTCGACGGATAGTATAATCA----------------------AAAATGCACCGCAGACATGTTT-TTG-TTGATTCTGT--ACTTGGGAGTATTTATAAGGGCATTTTTTTTACATTTATTGACAGGAATAT-TTGTGA--------------TTTTTT--TGTGGATCCCCCCCCCACCCCAAAC----------ATTACATTTTATCTTA--T--A--AGTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACTTGATAATCGAGATTCAGTCAACAACTTGAACAATATCCGGAAT--------CTACGAGATT--GTCTAG-GGG--ACA---AAT-TA--------AT---------GAC-GA-----------GGAACGAATCTATGAGAATAAG---GCATAAATAGTttgctgactgttttaacgagttttccagttattctctggcaaaatttatgaagtattaacagttgaaacacaatcaaaaagta
gi|20 : TGTTGTTCCATAGATTCA--TC---CCC-CT-AAAG--AGCGT-GATTTATGCAC----GT----TC--GTTAT------GTAC---TGCATATTTCTCCAACCAAATTTTATTTACCA---GATATTA----AACAACAAAAATC-TACATATTCTGAATACGAACAATAAAC-ATT-AAC---C--AACTG-TCTTTCAG-AAGATATCTC----ATT-----------------------CATCAATATA--CTG--TAAAAGCTTTCTCATTGAtgtttttatttacaatgccacaagatgaaaaaagt
gi|21 : aTTGGTCTTTAATTGAATTGACCATCACACAGTGCTGCCTAATATTTCGATGGATAGTATAATCAAGGGAGATTATCACAG-ACCA-AGAATACAATGCAGACATTTTTACTATTTGGTTCTGTGAA---GGAAGTGTTTAAAAAGCCA--TGTTTTACATTAAA--AGAGGATAATGTTATGA--------------TTTTT
gi|22 : TGTTGTTCCGTCAATTCA--TC---CCC-TT-GTGG--TGCAA-GGTTTGTGTAT----GG----TT--GCTAT------TTAC---TGCATATTTCTGCTTCCAAATTT-------CA---TAT-TCA----ACA-ACCAAAATC-TAAGTGTTACAAACACAAACCATTAAT-AATCAACAAACAAATATGTGATTCCAACTCAATATTa
gi|23 : cAATATCTG-------------CACAG-GTA--GTTGCA-CAC--ACATGGAGT-TA---ATAGTATGGTCAAGGGGGC-AAATTGATGAGAAGCAATGAATTAATGAGAATAAG---ATATA
gi|24 : cacttttcttctcttttattttgttggtgtttgatataatgattaacaatcttccaaaaaaggacaaTTGATTCG--TG---CCC-CT-AAAG--TGCGA-GATTCACGTAC----GCGCGTGC--GTTAT------TTGC---CTCATATTTCc
gi|24 : gTCGTCCAGAGGAC-GAATCAATGTAAAGGAACAATTCAGTGAGAAAAGG---GCA-AACgtccagaggacgaatcaatgtaaaggaacaattcagtgagaaaagggcaaacatcaaatttgagaacaaaaccatatat
gi|25 : gttgattcgtgcccctaaagtgcgagattcacgtacgcgcgtgcgttatttgcctcatattCCATTGATTCATCTGATTCTC-CTGAAGG--TCTGT-GGTTC-----T----GA----GCTGGTTATTTTTTACTACATGTATATATTTCTGCAATCAGATTT-------CATATAAT-TTA----ACA-ATAAAAATC-TATTTGTTACA-----AAACAACAACA-ATC-AACAAAatcaaatttgagaacaaaaccatatat
gi|26 : AACACAGTT--T--CAA---ATGTTT-----CC----T----TAGTATA--AAATTTTTTTGGT--GCAC-AT--C--AAAAAAATTATTGCATTAAGAATTATTATTTGAGTCATC-TTTGTAGGATTG--TATA----ATGTTTCAAGa
gi|27 : taaGTTCCATTGATTCT--TG---CCG-CT-AAGGGGTACAA-GATTTGCACAT----GT----GC--ATTAT------CTGC---CGCATATTTCTGCAACCAGATCT-------CA---AAT-TTA----AAT-ACAAATATC-TAAGTGTTAtgcat
gi|28 : TGTCTTCCCAT-GATTCA--TC---TCT-CC-AAAG--TTCAT-GATTCGCATAT----GA----AC--ATTAT------TTCC---AGAATATTTCTGCAATTAGATTT-------CC---AAT-TCA----ACA-ACAAAAggccataataaa
gi|29 : tTGTTGTTTCATTGAATGG--TG---CAT-CT-TAGA--TGGGA-GATTCACACAT----GC----GA--AT-AT------CTGC---CACATATTTCTGCAACCAGATTT-------CA---GATGTTGCCATAGT-ATAAAAATtcaaaaattgggatataa
gi|3 : cGTTGTTCCATTGATTT---TG---CCC-CT-TAGA--TGTGA-GATTCGCACAT----GC----AC--ATTAT------CTGC---CTCATATTTCTGCAAC-AGATTT-------CA---AAT-TTA----AAC--CAAA--TT-TAAGTGTTACACATAAAAACAATAAAAAAAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCTAAACCAGCCTTGTCTGTCAAAATC--ATG--AAAACAATTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GTCGATAC-----TGTACTGTTCTACAA--TAATTT-AGGA-TAT-TCC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AA-----TG---TTTC--A------CTATTTAATATTA-T-TGTTAGCACATTTT--TAACCTGACCAATAT-T-AAA---AA--TGACATATTT--T--CAA---ATGTTT-----TC--T------TAGTATA--ta
gi|3 : TC-ATTGTAGGATTATATATATGTAATATCTCAAGGCCATATAAACACTT-TGG-AAAAAAATTGCACTTTGTTTCACTCTT---AATGGGGTTGCTGTCATGAGGA-TT-AGGACACAGATACAC-ACACGC--GTGT--GCACACATATAATAT-GTTATTGATGTTTT-TAGATTGGCCTTTA-TTGAATTGACCAGCATACAGTGTTGCTTAACTTTCCGACGAATAGTATAATCAAAGGAGATAATCA-AGCATCCGAGAATGCA---CAGACATTTTT-TTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTAACTGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------GG------------AGTAT---Tttcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|3 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatatGAGTA--TTTTTTTCTCTCAA--ACAC-AATAT-TTG--A--------------T----------------------------AA------------ATTAC---TCATC--T--TTTA--TCTGTT--TTTTTTT-CACA---TTT-TT-C--TT--GGCTTTACATGAGAATCGAGATTCTGTCAACAACTTATACAATATCTGGATG--------CTACAA-GTA--GTCAAG-CAA--GTATGGAATCTA---CAAG-ATTGTCGAGGAGAC-AAAtttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|30 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatattcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttgTCGTCCAAAAACTTGTACAATATTCGGAC
gi|31 : attattttacattttcagttatacagtctagttgataaataaCTAAAAACTTGTACAATATCCAGACA--------CAACAA-TTA--GTTTAG-TGA--GCATGAAATCCACATCGAG-Aatgataaaacttcaataaaggcatg
gi|32 : aggttgatgataaacaatagtCAACAACTTGTACAATATCCGGATG--------CCAAGA-ATA--GTCATG-TGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAT-GAATCAATGAGa
gi|33 : tGA--ACATGGAATCCA---CGAA-TTTGTCGAGGGAAC-TTATCGACGAAAAAGAACAGATTGTTGAGAATAAG---ACCTA
gi|35 : aaaatttcaaatATGG-ATA--GTTGGG-CAA--GCACGGTTGCTG---CGAG-ATTCTTGAAGGGCG-GAATCAATGAGAAGGAATGAATCTACGAGAAT
gi|36 : acaACAATATCCGGACG--------CTACGA-ACA--ATCCCA-CGA--GTGCGAAATCCA---CGAG-AGTGTCGAGGGAAC-GAATCAAT
gi|38 : a-AAAAAA---GCATTTTATTTCACTCTTCTTGACTGGACCCCCTTCAAGAGGACTTAAAGACACt
gi|39 : TGTTGTTCCACTGATTCA--TC---CCC-CT-AAGG--TG
gi|4 : tTGTTCCATTGATTCA--TA---CCC-CT-AAGA--TGCGA-GATTCGCACAT----GC----GA--ATTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CC---AAT-TTA----AGT-TTAAAAATCATAAGTGTTACGGATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACTGTCAAAATC--ATG--AAAACACTTTCTCATTGAT---TTGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AA-AATG-GGGAA-------GTCCAGG-TCCAATAC-----TATAATGTTTGACAA--TAATTC-AGGA-TATCC-C-CC-TGCATATTAAATG-TTCT---TAA---G-----AT-----GG---TTTC--A------C----TAATATTATT-TTTTAGTGCATTTT--GAACTTAACCACTAT-AAAAA---AA--TAACATAACT--T--CAA---ATGTTT-----TC--------ATGGAATA--AAAAACTAGTGGT--AAAC-AA--A--AAAAAGTTTATTGCATTAAGAATTGTGGTTTGTGTCATCATTTGTAGGATCG--TATA----ATATCTCAAGTGCATGTAAACACTT-TGGAAAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCTGTCAAGAGGACTT-AGGACACAGATACAG-ATGCAC--GTGC--ACACA------------TTATTGACAGTTT-TAAATTAATCTTTA-TTGAATTGACAAGCTCGCAGTATTACTTAACTTTTCG
gi|5 : GTTGTTCCATTGATTCA--TG---CCC-CT-AAGG--TGCTA-GTTTCCCACAT----GC----CC--ATTAA------CTGC---TGCATATTTCTGCAACCAGGTTT-------CA---AAT-TTA----AGT-ACAAAAATC-TAAGTGTTGCGCATACATACAATGAAA-AAT-AACAAACAAAACAGATATTCCAACAAATTATTAC----ATT------TCGTAACATGCCTTGACTGTCCAAATC--AT---AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-AGTG-GGGAA-------GT---GG-GCCGATAT-----TATACTGGTTGACA---CAATTTTAGGA-TAT-TTC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GT---TTTC--A------CAATTTAATATTA-T-TTTTAGCGTA--------------CCACT---GAAAAAACAA--CAACAAAATT--T--C-G---TTGTTTTTTTCTC-ATAC---ACAATATATTATAAATTA
gi|5 : TTA--T--------------------AA------------ATTAC---TCTTG--AAAT--A--CCTGTT--TTT-TTT-CACA---TTT-TT-CTTTT--GGCTTTACATTTGAA--GCGATTCATCCAACAACTTGTACAATATACGAACG--------CTACGG-ATA--GTTGCG-CGA--GCAGGGAATCTA---CAAG-ATTGTCGAGGGGAT-GAATAAGTGAGAAGAAATGAATCTATGAAATTAAG---GCATAActcttgaaatacctgttttttttcacatttttcttttggctttacatttgaagcgattcatccaacaacttgtacaatatacgaacgctacggatagttgcgcgagcagggaatctacaagattgtcgaggggatgaataagtgagaagaaatgaatctatgaaattaaggcataaattgttaatgacaaataaag
gi|6 : gttgttccattgattcatgcccctaaggtgctagtttcccacatgcccattaactgctgcatatttctgcaaccaggtttcaaatttaagtacaaaaatctaagtgttgcgcatacatacaatgaaaaataacaaacaaaacagatattccaacaaattattacatttcgtaacatgccttgactgtccaaatcataaaacgctttctcattgattcgtcccctctgattggttgcttaaaatattcacagtggggaagtgggccgatattatactggttgacacaattttaggatatttccctgtgtattaaatgttttttagacgttttcacaatttaatattatttttagcgtaccactgaaaaaacaacaacaaaatttcgttgtttttttctcatacacaatataTT-----TC-AT-----AT--TATA--AAACATTAGTGTTTAAGAC-AT--G--ACAAAGTTTATTGCATTATAGGTTTTGGTTTTAGTCATC-TTTGTAGGTTTGTGT-TA-----TATCTCAAGGTCATATAAATACTT-TGG-AAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCCTCAAGAGGACTT-AGGACACAGATACAC-ATGTGCATGTGC--GCATATATAT--AATTATTATTGATTTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCATGCAGTGTTGCTTAACTTTTCGACCGATAATATAATAAAGGCAGATAATCA-AGCATCC-AGAATGTACCACAGACA--TTT-CTG-TTGGTTCTGT--ACTTAGAAGTGTTTAAAAGGAGA--TTTTTTACATTTAATG--AGAAATAT-TTGTGATTTTGGAGTATTTTTTTTTT--C--------------------AATCATTTTATTTTATTAC---TCATCTTA--T--A--CCTGTC--CT--TTT-CACA---TTT-TC-C--TT--GGCTTTACATGAGAATCGAGATTCGGTCAACAAATTGTACAATATCCAGATG--------CTACGA-ATA--GTCGCACCAA--GCAAGGAATCTA---TGAG-ATTGTCGAGGGAAC-AAATCAATGAGAAAGACCGAACCTATGAAAATAAG---GCATattgttaatgacaaataaag
gi|7 : gaTTGTTCAATTGATTCG--TG---CCC-CC-AAGG--TACGA-GATTTGGGCAT----GC----GC--ATTAT------CTGC---TGCATATCTCTGCAACCTGATTT-------CA---AAT-TTA----AAT-ACAAAAA-C-TAAGTGTTACACATACAAACAATAAAA-GAT-AACAAACAAAACAGATATTCCAG-AAATTATTAC----ATT------TCGAAACCAGCATTGACCGTCGAAACC--ATC--AAAACGTTTTCTCATTGAT---TCGTCCCC-TCTGATT-GTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCTGG-GCCGATGA-----TATACTGTCTGACAA---AATTTGAGGA-CAT-T-CTCC-TGTGTATTAAATG-TTTT---TTA---G-----GT-----GT---TTTC--A------CTATTTAATATTA---ATTTAGCGCATTTT--GAACCTGACCACTGTAAAAAA---AA--TAACATAAT
gi|7 : A--------------TTATTTAAT--------------------AA------------CTAAC---TCATCTTA--T--A--CATTTT--TT--TTT-CACAATTTTTATT-T--TT--GGCTTTATGTGAGAATTGAGATTCGGCCAACAACTTGTACAATATCTTAAAG--------CTATGA-A----------------ACACAGAATCTA---CGAG-ATTGTCAAGGAATC-AAATCAATGAGAAGGAACAAATGTATGAAAATAAG---ACATAaataaaaattcccatacactttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
gi|8 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaacgttttctcattgattcgtcccctctgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttGTTGTTCCAATGATTCA--AG---CTC-CT-AAGG--TGCAA--ATTTGCACAT----CC----GC--ATTAT------CTGC---CACATATTTCTACAACCAGATTT-------CC---AAT-TTA----AAT-ACAAAAATC-TATGTGTTACACATACAAACAATAAAT-AAT-AACAAAGAAAACTGATATTCAAGCAAATTATTCC----ATT------TTGTTACCTGCCTTGACCTTCAAAATC--ATG--AAAACACCTTTTCATTGAT---TC-T--------------TTGCT-CA----AAATA---T---C---C-AC-AATA-GGGAA-------ATCCAGG-GCCGATAA-----TATTCAATTCAACAA--AAATTT-ATGA-TAT-T-C-TC--ATGTATTAAATG-TTTT---TAA---G-----AC-----AT---TTTC--ACTAGATCTATCTAATATTA-C-ATTTAGCGCATTTT--GAACCTGAGCACTAT--AAAA---AA--TAACATAATTAAA--AAA---AAATTC-----TC-AC-T---ATTTTATA--AA
gi|8 : TTTTA--T--------------------AA------------ATTAC---TCATC--A--T--A--CC---T--TT--TTC-CATATTTTTT-TT-T--TT--TGCTTTACCAGACACTCGAGATTCGGCCAACAACTTGTACAATATCCGAACG--------CTACGA-ATA--GCCGCG-CGA--GCACGGAATCTA---CAAG-ATAGTCGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGttactcatcatacctttttccatattttttttttttgctttaccagacactcgagattcggccaacaacttgtacaatatccgaacgctacgaatagccgcgcgagcacggaatctacaagatagtcgaggggacaaatcaatgagaaggaacgaatctatg
gi|9 : gttgttccaatgattcaagctcctaaggtgcaaatttgcacatccgcattatctgccacatatttctacaaccagatttccaatttaaatacaaaaatctatgtgttacacatacaaacaataaataataacaaagaaaactgatattcaagcaaattattccattttgttacctgccttgaccttcaaaatcatgaaaacaccttttcattgattctttgctcaaaatatccacaatagggaaatccagggccgataatattcaattcaacaaaaatttatgatattctcatgtattaaatgtttttaagacattttcactagatctatctaatattacatttagcgcattttgaacctgagcactataaaaaataacataattaaaaaaaaattctcactaTCCATTGATTCG--TG---CCC-CA-AAGG--TGTGA-GATTCGTTGAT----GT----GC--ATTAT------CTGC---TGCATATTTCTGAAACCAGATTT-------AA---AGT-TTA----AAT-TCAAAAATC-TAAGTGTTACATAT----ACAATAAAA-AAT-AACA---AAAACTGATATTCAAGCAAATTATTATAA--ATT------TCATAACCTGCCTTGACCATCGAAATC--ATG--AAATCGCTATTTCATTGAT---TCATCCCA-TCTGATTGATTGCT-T-----AAATA---T---C---C-AC-ATTG-AGGAA-------ATCCAGG-GCCGACAA-----TATACTGTTCAACAA--AAATTT-AGGA-TAT-T-C-CTATGTGTATTAAATG-TTGT---TTATACGTTTATAC-----GT---TTTC--A------CTATTTAATATTA-T-TTTTAGCATATTTTTAACACCTGACCCCTAT---AAA---CA--TAA
gi|9 : cA--------------TATCTT--T--------------------AA------------ATTAC---TCTTC--A--T--ATACCTGTT--TT--TTTTCACA---TTT-TT-C--TTTTGGCTTTATATGGGAATCGAGATTCGCCCAACAACTTGTACAATATCCGAACACTAATAGTCTATGA-ATA--GTCATG-CGA--GCATGGAtcctctttttttctcatacactatatctttaaattactcttcatatacctgttttttttcacatttttcttttggctttatatgggaatcgagattcgcccaacaacttgtacaatatccgaacactaatagtctatgaatagtcatgcgagcatggact
blockSeqs : ATC ATT G G GG C ATAT GCGT TGG TTTTTA ATG TATTTAC TAT A CCAT ACA A AA A T C A A ATAA AAATTT A A C G CT TAA ACC A A ATATTAG GCC CTG CTT G T T AAGGACCCA GGTA TATCTA G AAGG T G C CT T C TTG TAC ACATTTTCACTAGATCT T TG G TAAC A AA AAC AT A TAA TAGA T TTTTCTCATAC TT ATTG TA T TGG T A ATA TGTA A A AT CTT T A A C AT AA C ATAATAT TG A AT T A C T A T C C G C TG A T GA TT T T G G TTTTGGAGTATTTTTTTTTTCAATCATTTTATTTT ATT TT AA TT TA AG TT T ATT A T TT TT A T CTAATAGT G TA AT C TG T CAT T T TCC
blockSeqs : A . . . . . . . T . . . . G . TA . GA . T . T A AA . A G C A . T . A . AA . CG . . . . ATC CAA CT A AA G . . CC G . . . TTTATACGTTTTCACT A TG A TT G G . T A AAA A T CAATTAAA . ACCT . . GTA A . ATA . . . AT . G . . C . . C ATAATT CT . CA C . C T A A . C . A TT . . . . A T G . TTTTTTTGTGGATCCCCCCCCCACCCCAAAC . TT . . TA . T . TTT . . . . T T . . . AA . . T . . . .
blockSeqs : G . . . . . . . G . . . . . . AA . AA . C . G A . . A A C C . T . A . AA . . . . . . TC GGA C T AT . . . TC G . . . ACCAACATGTTT C TG A TT A A . . T T A T TCACT . AGTT . . G A . GTG . . . T . T . . C . . C ATTAT TG . AG T . C G A A . . . C TT . . . . A T G . TTATTTAATAA . TT . . . . . . . . . . . A G . . . GC . . T . . . .
blockSeqs : A . . . . . . . G . . . . . . AT . GT . A . T A . . G A T A . T . A . TA . . . . . . TC GGG C G AT . . . CT T . . . CTGACAAAACT G TT A CT T G . . C T C T CCAT . TTTG . . C G . T . . . T . C . . T . . T AT CA . AA C . A G G . . . . . . . . . . C . A . TTTTTTTGG . . . . . . . . . . . . . A G . . . GT . . T . . . .
blockSeqs : A . . . . . . . A . . . . . . CA . GA . T . T A . . T T T G . A . A . TA . . . . . . TC GGT C G AT . . . C A . . . CCGGCAATCTC A T C CT C T . . T T T T TCAT . AGTG . . A T . G . . . . . C . . . . . . . TT . AA . . C G G . T . . . TATCTTTAA . . . . . . . . . . . . . A T . . . AC . . T . . . .
blockSeqs : A . . . . . . . G . . . . . . CA . AA . A . A A . . G A T A . A . G . AA . . . . . . TC GGG C G AT . . . T . . . . ATGGTGTCACT A T C CA C A . . T T A T CCT . AGTG . . G . G . . . . C . TAA . . . . . . . . . . . . . G T . . . TA . . T . . . .
blockSeqs : G . . . . . . . G . . . . . . AT . AC . T . A A . . G A C A . T . G . AA . . . . . . AG GGG C A AT . . . C . . . . AATGTTTCACT A T C TA C G . . A T A T TCT . T . . . . . . . . . . . . . . . C G . . . GC . . T . . . .
blockSeqs : T . . . . . . . G . . . . . . CA . GG . A . A A . . G T T A . A . G . TA . . . . . . AG GGG C T AA . . . T . . . . ACGTTTTCACA A T T GA C . . . T T A T TA . . . . . . . . . . . . . . . . . A G . . . AA . . T . . . .
blockSeqs : A . . . . . . . A . . . . . . GT . GC . A . A T . . G A T A . A . G . TA . . . . . . AG GGG C T AA . . . C . . . . GTGTTTTCACT A T C GA C . . . T T T . CA . . . . . . . . . . . . . . . G . . . TA . . C . . . .
blockSeqs : G . . . . . . . A . . . . . . AC . AC . A . A T . . A T T C . A . G . TA . . . . . . AG GG T G T . . . C . . . . CCGACAAACT A C C GA . . . . . T A . AT . C . . . AT . . T . . . .
blockSeqs : A . . . . . . . A . . . . . . GT . AC . A . A T . . . T T G . A . G . TA . . . . . . AG G A G A . . . C . . . . ATGGTTTCAC A T T . . . . . . . . . TC . . . . GG . . C . . .
blockSeqs : A . . . . . . . A . . . . . . GT . AT . A . . T . . . . . A . A . A . TA . . . . . . AA G A G C . . . C . . . . ACAAAACA . . TC . . . . CC . . C . . .
blockSeqs : A . . . . . . . A . . . . . . AT . A . A . . . . . G . A . . . CA . . . . . . AA T A A A . . . C . . . . CCAGCA . . . . . GC . . G . . .
blockSeqs : G . . . . . . . A . . . . . . AT . . . . . . . . . . . T . . . . . . . G . A . . . . C . . . . . . . GC . . A . . .
blockSeqs : A . . . . . . . A . . . . . . AT . . . . . . . . . G . . . . . . . . . . . . . . GC . . C . . .
blockSeqs : G . . . . . . . A . . . . . . . . . AT . . C . . .
blockSeqs : . . . . . . A . . . . . . . T
blockSeqs : . .
blockSeqCons : TA***** TCAT*********** AT ATTT**** AA
originalCons : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAATTT-AGGA-TAT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA---AA--TAACATAATT--T--CAA---ATGTTT-----TC-AT-T---ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAA-TTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--TAT-GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAGT
finalCons : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCTTA-----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAATTT-AGGA-TAT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA---AA--TAACATAATT--T--CAA---ATGTTTTCAT-----------ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGG-AAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACATTT----GTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAGT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34 ): TACAGGATTGCCGAGGGCATGGGTAAGTGAGAAGACATAAATAAATGAAAAGGTGCAAATCAGAAGTGAATGATACATAATC
Unaligned ( gi|37 ): AGTTGATGATAAACAATTGCATAAAAACTTGTACACTATTTGGACACAAAAAATAGTTAAATG
Alignments
lowQualScore : 1111 111111111 111111 111 1 11111111111111111111111111111111 111 1111111111111111 111 1111 111 33333 11 555555555555555555555555555555555555555555555555555555555 11 11 111
lowQualScore : 666 333 2 2 33 2 0 5555 4444 444 666666 333 7777777 444 4 5555 555 2 44 2 2 2 4 1 0000 888888 1 2 1 0 2 33 444 0 444 1 2 44 5555 444 777 444 2 2 2 666666666 7777 000000 1 000 2 2 2 2 2 2 5 2 2 444 444 44444444444444444444444444444444 2 888 1 8888 1 333 3 77 3 2 66666 555555 3333333333333333 33 5555 66 4 99999 1 0 5 333 2222 6 5 000 1 0 0 5 6 1 99 99 1 33333 11 6 33 3 6 2 2 2 0 3 8 5 8 5 11 8 8 11 99 1 7 3 6 222222222222222222222222222222222222222222222222222222222 777 66 55 55 11 55 99 4 444 4 4 55 55 8 1 99999999 2 33 44 2 22 3 444 2 2 0 666
lowQualScore : ... ... . . .. . . .... .... ... ...... ... ....... ... . .... ... . .. . . . . . .... ...... . . . . . .. ... . ... . . .. .... ... ... ... . . . ......... .... ...... . ... . . . . . . . . . ... ... ................................ . ... . .... . ... . .. . . ..... ...... ................ .. .... .. . ..... . . . ... .... . . ... . . . . . . .. .. . ..... .. . .. . . . . . . . . . . . .. . . .. .. . . . . ......................................................... ... .. .. .. .. .. .. . ... . . .. .. . . ........ . .. .. . .. . ... . . . ...
lowQualScore : 111 999 2 2 11 4 5 0000 7777 222 444444 999 6666666 111 7 0000 000 7 77 7 8 7 6 1 0000 222222 9 0 8 5 7 77 999 5 777 4 5 00 3333 444 888 444 5 5 5 666666666 8888 111111 8 999 5 5 5 5 5 5 0 5 5 444 444 33333333333333333333333333333333 6 777 0 9999 8 777 3 99 8 9 11111 000000 6666666666666666 99 8888 11 4 88888 0 3 7 777 1111 7 0 000 7 7 7 7 7 0 22 22 0 88888 77 7 55 7 7 5 5 2 8 8 0 0 0 0 44 0 0 00 22 0 3 7 7 111111111111111111111111111111111111111111111111111111111 000 55 55 55 00 55 55 0 000 0 0 55 55 0 4 11111111 2 11 22 2 99 7 111 4 4 6 444
consensus : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-AAAAA-AA--TAACATAAT-T--T--CA--A---ATGTTT-----TCA-T--ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGGAAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-TGTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAGT
Reference ( family-2272 ) : TGTTGTTCCATTGATTCG--TG---CCC-CT-AAGG--TGCGA-GATTCGCGCAT----GC----GC--GTTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-ACAAAAATC-TAAGTGTTACGNATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACCGTCGAAATC--ATG--AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GCCGGTAC-----TATACTGTTCGACAA--TAA-TTT-AGGA-TA-T-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GG---TTTC--A------CTATTTAATATTA-T-TTTTAGCGCATTTT--NNACCTGACCACTAT-GAAAA-AA--TAACATAAT-T--T--CA--A---ATGTTT-----TCA-T--ATAGTATA--AAAAATTAGTGGT--ACAC-AT--G--AAAAAGTTTATTGCATTAAGAATTNTGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATATCTCAAGGCCATATAAACACTT-TGGAAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-TGTTATTGACGTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCACGCAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATNATCA-AGCATCC-AGAATGCACCGCAGACATTTTT-CTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTNAATGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------AA------------ATTAC---TCATC--A--T--A--CCTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACGTGAGAATCGAGATTCGGCCAACAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCGCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAG---GCATAACTAGT
gi|1 : TGTTGTTCTATTGATTCG--TG---CCC-CT-AAGA--TGCGA-AATTCACGCAT----GC----AC--AATAT------CTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TTA----AAT-TAAAAAATC-TAAGTGTAACGCATACAAGCAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATAATAC----ATC------TCATAACCACCCATGACCATTAAAATC--ATG--AACACGCTTTCTCATTGAT---TCGTCCTC-TCTTATTGGTTGC--TA----AAATA---T---C---C-AC-AATG-AGGAA-------GTCCAGG-GCCGATAC-----TATACTGTTCCACAA--TAA-TTT-AGGA-TA-T-T-A-CC-TGTGTATTAAATG-TTTT---ATA---G-----AT-----GG---TTTC--A------CTATTTAATATCA-T-TTTTAGCGCATTTT--GTACCTGACAACCAT-GAAAA-AG--TAACATAAT-T--T--CA--A---ATGTTT-----TCATT--ATAGTATA--AAAAATTAGTAAT--ACAC-AT--G--GAAAAGTTTATTGCATTAAGAATGATGGTTTGAGTCATC-TTTGTAGGATCGTATATA----ATAGCTGGAGGCCATATAAATACTT-TGG-AAAAAATTGCACTTTATTTCATTCTT---AATAGGGCGGCCGTCAAGAGGACTT-AGGACACAGATACAC-ACGCGC--GCGC--GCACACACAT--T-TGTTATTGATGTTTT-T-GATTGACCTTTA-TTAAATTGAC-------CAGTGTTGCTTAACTTTTCGACGGATAGTATAATCAAGGGAGATCATCA-AGCGTCC-AGAATGTACCGCAGACATTTTT-CTA-TTGGTTCTGT--ACTTGGGAGTGTTTAAAAGGGCA--TTTTTTACATTTAATGACAGAAATAC-TTGTGA--------------TTTCTT--T--------------------GG------------GGTAG---TTA----A--T--A--CCTGTG--TT--TTT-CACA---TTT-TT-C--TT--GGTTTTACGTAAGAATCGAGATTCCGTCAGCAACTTGTACAATATCCGGACG--------CTACGA-ATA--GTCCCG-CGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAC-GAATCAATGAGAAGGAACGAATCTATGAGAATAAT---AAATAACTAAT
gi|10 : AT-T--T--CA--G---ATGTTG-----CCA-T--A--GTATA--AAAA-TTATTGGT--ACACTATTGG--TATAA--TTATTG------GAATTTTGGTTTGGGTCACC-TTAGTAGGATC-T-TATA----ATATCTCAAGGCCATAGAAGCACTT-TGGATAAAA-TTGCACTAAATTTCACACTT---AACAGGGCTACCTTCAAACAGACTA-AAGACACAGATACAC-ACGCGA--GCGCAAGTACACACA-----TGTTATTGATGTTTTATATATTattgtaccagagtaaaaaagc
gi|10 : ccagTTTTA--T--------------------AA------------ATTAC---TCATC--A--T--ATACCTGTT--TA--TTT-CACA---TTT-TTTC--TT--GGCTTAACATGAGAATTGAAATTCGTTTAACATTTTGTACAATATCAAAATG--------CTATGA-ATA--G-CATA-TGA--GCATGGAATTTA---TGCA-GTTGTAGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGAGAGTATGTCCGCATAttataaattactcatcatatacctgtttatttcacattttttcttggcttaacatgagaattgaaattcgtttaacattttgtacaatatcaaaatgctatgaatagcatatgagcatggaatttatgcagttgtagaggggacaaatcaatgagaaggaacgaatctatgagagtatgtccgcata
gi|11 : ccagatttcagatgttgccatagtataaaaattattggtacactattggtataattattggaattttggtttgggtcaccttagtaggatcttataatatctcaaggccatagaagcactttggataaaattgcactaaatttcacacttaacagggctaccttcaaacagactaaagacacagatacacacgcgagcgcaagtacacacatgttattgatgttttatataCATCAAAATGTTAC----ATTAAATTTTTATAAGCAGTCTCTATCATCGAAATT--CTG--TAAAGGCTTTCTCATTGGT---TCATCCTC-TCTGATTGG-TGCT-AA----AAGTA---T---C---A-GC-AATA-TGGAAT------CTCCAGG---CAGTACT----TTTACTGTTCGGTG----AA-GCT-ACAAGTA-T-T-C-CCTTATGAATTAGATACTTTT---TTG---G-----CT-----GA---CAAA--A------CTGTTTTAAATTA-TGTTTGAACGGGTTTT--TT--CTAAGTGTT-------C-AA--TAACAAAAA-T------A--A---ATGTTT-----T-A----ACAGT-T----AAAATT--T--------C-AT--G--AAAAAGT
gi|11 : aAACTTCTACAATAACCGGACA--------CAACAA-ATA--GTTAAG-CGA--GCATGGAATACA---TAGG-ATTCTTAA--CGACTGAATC-ATAAAAAGGAATGAATC-AAAAGAATAAA---GCATAacatctaacattttaccgagtatagttcatgaaacttctacaataaccggacacaacaaatagttaagcgagcatggaatacataggattcttaacgactgaatcataaaaaggaatgaatcaaaagaataaagcata
gi|12 : acatcaaaatgttacattaaatttttataagcagtctctatcatcgaaattctgtaaaggctttctcattggttcatcctctctgattggtgctaaaagtatcagcaatatggaatctccaggcagtacttttactgttcggtgaagctacaagtattcccttatgaattagatacttttttggctgacaaaactgttttaaattatgtttgaacgggttttttctaagtgttcaataacaaaaataaatgttttaacagttaaaatttcatgaaaaagtacatctaacattttaccgagtatagttcatgaTGATGTTCTGTTGATTCA---G---CCCGCT-AAGG--TG-GACAATCCACACATATATGC----GC--TCTAT------TTGC---TGCATATTTCTGCCACCAGATTT-------CA---TAT-TCA----ATA-ACATAAATC-TAATGGTTACAAACACAAACAATAAAC-ATC-AAGAAACAAATATG--ACTCCATCATAATATTACATAAATT------TCATAGGCGATCTCGATCATAAAAATC--AAG---TAATGCTTCCTCATTGATACCTCACCCCCATCC--CTGTTTGCTATATTAGAAATAGCCT---C---C-AT-TATA-GGAAT-------CACCA---GCCAGT-----------TTGTC--------TA----T-AGGA-TA-T-T-T-CCGTATGTATTAGATC-TTTTTTGTTA---A-----AC-----AA------A--A------CAATTC-ATATTA-T-GTTTA
gi|13 : cGAATACAAACAACAAGA-A-T-ATTAGACATATGTGAT------------TACAAC----ATT------TCATAAGTAGTCCCAATAATCCAAATT--CTG--TAAAAGCTTTCTCGCTGAT---TCATCCCC-TCTAACTGTTTGCT-AA----TAATA---TCTGC---C-AT-TATG-TGGA---------TCCTCA-ATCAGTA---------------CAGCA----AA-TTT---------T-C-C-TC-TG----TTACATG--CTT---TTG---G-----CC-----AG------C--A--------ATCTA---------TTTTAATGAATTAT--TTAATTGACCACTAT--AAAA-AA--TAA---AGT-T--T--TAACA---A----T-----TAA-A--ATATTATG--AAAAA------GT--ACAT-AT--taatgtcttttct
gi|13 : A-ATA--GTTGCA-TAG--TCATGGAATCTG---CGAG-GTTATCGAGGGGAC-GAATtttattttacatttttcagaatatatttttctgtgaccatgaaatagttgcatagtcatggaatctgcgaggttatcgaggggacgaat
gi|14 : gaatacaaacaacaagaatattagacatatgtgattacaacatttcataagtagtcccaataatccaaattctgtaaaagctttctcgctgattcatcccctctaactgtttgctaataatatctgccattatgtggatcctcaatcagtacagcaaattttcctctgttacatgcttttggccagcaatctattttaatgaattatttaattgaccactataaaaaataaagttttaacaattaaaatattatgaaaaagtacatattttattttacatttttcagaatatatttttctgtgaccatgaTCAAAATC--CTG--TAAACGCTTACACATTGAT---TCATTCCC-TCTGATTGGTTGAT-------AATTA---T---CCTTC-AT-TATG-GGAAT-------CACCAG----CTATAC-----TAAACTGTTCTGCAAAGGAA---T-AAGA-TA-T-T-T-CTGTATGTATTAGATG-TTTT---TTG---G-----CC-----GGCAATCTC-----------GTTT-ATATTA-TGGTTTAACAAGTTTT--CTAGTTGTTTACTAC-GAAAA-AAT-TAACA-AAT-T--T--TA--ATAGATG---------CA----ATGTCATG--AAAAAGTACCTGT--ACAT-AT--
gi|14 : CAT---A--T--A--CCCGGTAGTA--TTT-TATA---TTT-TC-C--GT--GCAATTGT-TGATGATTAAAAATTGTCCAAGAACTTGTACAATATCCAGACA--------CAATGA-ATA--G--GTG-CAATGGCATGGAATacccggtagtattttatattttccgtgcaattgttgatgattaaaaattgtccaagaacttgtacaatatccagacacaatgaataggtgcaatggcatggaatt
gi|15 : tcaaaatcctgtaaacgcttacacattgattcattccctctgattggttgataattatccttcattatgggaatcaccagctatactaaactgttctgcaaaggaataagatatttctgtatgtattagatgttttttggccggcaatctcgtttatattatggtttaacaagttttctagttgtttactacgaaaaaattaacaaattttaatagatgcaatgtcatgaaaaagtacctgtaTTGATCCG--TG---CCC-AT-AAAA--TGCAA-GAGACGCGCAT----GC----AT--GTTAT------TTGT---CGCATATTTCTGCAACCAGATTT-------CA---AAT-TAA----AAA-ACAAAAATC-TAAGT-------ACACAAGCAATAAAA-ATT-AACAAACAGAACTGTTATTCCAGC-----ATTGC----A-----------TAACCAGGCTTGACCATCGAAATT--ATGTAAAAA---------------------------TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-TATG-GGGAAAGGACCCATCCAGGTACCAGTAC-----TATACAGTTTGACCA--AAA-TTT-CGGA-TA---------------ATTGA----CTTT---TTA---G-----AC-----AG---TTTC--A------t
gi|16 : C----AC--GCTAT------TTAC---CGCATATTTCTGCCACCATATTT-------CA---TAT-TCA--------ACA---------------ACAAACACAAACAATAAAA-CCA-AACATACGAAAATAGGATTACAACAAAATATTAG----ATT------T
gi|16 : TTTCTCATCGAT---CCATCCCC-TCTATTTGCTTTAC-TA----AAACA---T---C---C-TCTAGTATAGGAT-------CTCCA---TCCAGTATATCTATATACTTTTTGGCAA---GG-TAT-AAGC-T--T-T-C-CT-TGTGTATGCAA---TTTT---TTC---G-----ACCAACATG---TTT-------------TTTCATATTA-T-tctgtatttttttttaatgtttctcatcgatccatcccctctatttgctttactaaaacatcctctagtataggatctccatccagtatatctatatactttttggcaaggtataagctttccttgtgtatgcaattttttcgaccaacatgttttttcatattatactcaa
gi|17 : cacgctatttaccgcatatttctgccaccatatttcatattcaacaacaaacacaaacaataaaaccaaacatacgaaaataggattacaacaaaatattagattttctgtatttttttttaatgCCAGAAACTTGTACAGCATCTTGACA--------CAATGA-ATATAGTTACA-CAA--GTATGGAATCCA---CAAG-ATTCTCGAGGGGAC-AAATCAATGAGAAGGAATGAATATATGAAAATGTA---GCATAactcaa
gi|18 : ataattttcctttttttagtgctaaaacttataataaataatattTTCCC-TCTCATTGGTTACT-AA----ATATA---TCG-C---C-AT-TATG-GGAAT-------CTCCA---GCCAGTAC-----CATTCTGTTTGGCAA--TAG-TAT-ACG--TA-T-T-C-C-------ATTAGATG-TTTT---TTG---G-----CC-----GA------CAAA------CTGTTTGATATTC-TGTTTTAAAGAGTTTT--CTAAGTGTTCACTAT-AAAAA-AAATTAAAAAAAT-T--TAACA--G---CTG----------A-T--ATATTATG--AAAAAtgtgctcttgttatgttacgatttattgagtgttaagaaagttgtaaaggacaagcttatctggagcaagttcccattt
gi|19 : AAATCCTATG--AA--CGCTTT-TCATT-------TGTCCAC-TTTGATTTGTTTGT-AA----AAATA---T---C---CGAC-AAC---------------TCCAG---CTAGTAC-----TTCGTTGTCCAACAA--TAG-TTT-AGGA-GG-T-T-C-CCTTGTGTGTTAGATG-TTTT---ATA---G-----aaaagtattttaccttttgtcatagtata
gi|2 : TCCATAGATTCA--CA---TCC-AA-AAGA--TGTGA-TATTCGCGCAT----GC----GC--ATTAT------CTGC---CCCACATTTCTGCAACCAGATTT-------CA---GAT-TTA----AAT-TAAAAACTC-TGAATGTTACGTATACAAACAATAAAA-AAT-AAAAATCAAAACTGTCATTCCAGCAAGATATTAC----ATT------TTGTAACCTGCCCTGACCGTCAACATC--ATG--AAAATGCTTTCTCATTGAT---TCGTCGCC-TCTGCTTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GAATA-------GTCCAGG-ACCGAAAC-----TATACTGATCTACAA--TAA-TTT-AGGA-TA-T-T-CTCC-TGTGTATTAAATG--TTT---TTA---G-----AT-----GG---TGTC--A------CTATTTAATATT--T-TTTTAGCGCATTTT--CAATCTGACTACTAT-GAGAA-AA--AAACTTAAT-T--T--CA--A---TTGTTT-----TC-----ATAGTATA--AAGAATTAGTTGT--ACAC-AT--GTAAAAAAGTGTATTGCATTAAGAATTATGGTTTGGGTCATC-TTTGTAGATTCATATAGA----ATATCTCAAGGCTATATCAACACTTATGAAAAAAAA--GGACTTTATTTCACTCTT---AACAGTGCGGCCGTC-------------GACAT--ATACACAACG-GC--GCGC--GCGCGCACAT--TATGTTATTGCCTTTTT-GCAATTGG-CTTTA-TTTAATTCACCATCACACAGTGTTGTTTAAGTTTTCGACGGATAGTATAATCA----------------------AAAATGCACCGCAGACATGTTT-TTG-TTGATTCTGT--ACTTGGGAGTATTTATAAGGGCATTTTTTTTACATTTATTGACAGGAATAT-TTGTGA--------------TTTTTT--TGTGGATCCCCCCCCCACCCCAAAC----------ATTACATTTTATCTTA--T--A--AGTGTT--TT--TTT-CACA---TTT-TT-C--TT--GGCTTTACTTGATAATCGAGATTCAGTCAACAACTTGAACAATATCCGGAAT--------CTACGAGATT--GTCTAG-GGG--ACA---AAT-TA--------AT---------GAC-GA-----------GGAACGAATCTATGAGAATAAG---GCATAAATAGTttgctgactgttttaacgagttttccagttattctctggcaaaatttatgaagtattaacagttgaaacacaatcaaaaagta
gi|20 : TGTTGTTCCATAGATTCA--TC---CCC-CT-AAAG--AGCGT-GATTTATGCAC----GT----TC--GTTAT------GTAC---TGCATATTTCTCCAACCAAATTTTATTTACCA---GATATTA----AACAACAAAAATC-TACATATTCTGAATACGAACAATAAAC-ATT-AAC---C--AACTG-TCTTTCAG-AAGATATCTC----ATT-----------------------CATCAATATA--CTG--TAAAAGCTTTCTCATTGAtgtttttatttacaatgccacaagatgaaaaaagt
gi|21 : aTTGGTCTTTAATTGAATTGACCATCACACAGTGCTGCCTAATATTTCGATGGATAGTATAATCAAGGGAGATTATCACAG-ACCA-AGAATACAATGCAGACATTTTTACTATTTGGTTCTGTGAA---GGAAGTGTTTAAAAAGCCA--TGTTTTACATTAAA--AGAGGATAATGTTATGA--------------TTTTT
gi|22 : TGTTGTTCCGTCAATTCA--TC---CCC-TT-GTGG--TGCAA-GGTTTGTGTAT----GG----TT--GCTAT------TTAC---TGCATATTTCTGCTTCCAAATTT-------CA---TAT-TCA----ACA-ACCAAAATC-TAAGTGTTACAAACACAAACCATTAAT-AATCAACAAACAAATATGTGATTCCAACTCAATATTa
gi|23 : cAATATCTG-------------CACAG-GTA--GTTGCA-CAC--ACATGGAGT-TA---ATAGTATGGTCAAGGGGGC-AAATTGATGAGAAGCAATGAATTAATGAGAATAAG---ATATA
gi|24 : cacttttcttctcttttattttgttggtgtttgatataatgattaacaatcttccaaaaaaggacaaTTGATTCG--TG---CCC-CT-AAAG--TGCGA-GATTCACGTAC----GCGCGTGC--GTTAT------TTGC---CTCATATTTCc
gi|24 : gTCGTCCAGAGGAC-GAATCAATGTAAAGGAACAATTCAGTGAGAAAAGG---GCA-AACgtccagaggacgaatcaatgtaaaggaacaattcagtgagaaaagggcaaacatcaaatttgagaacaaaaccatatat
gi|25 : gttgattcgtgcccctaaagtgcgagattcacgtacgcgcgtgcgttatttgcctcatattCCATTGATTCATCTGATTCTC-CTGAAGG--TCTGT-GGTTC-----T----GA----GCTGGTTATTTTTTACTACATGTATATATTTCTGCAATCAGATTT-------CATATAAT-TTA----ACA-ATAAAAATC-TATTTGTTACA-----AAACAACAACA-ATC-AACAAAatcaaatttgagaacaaaaccatatat
gi|26 : AACACAGT-T--T--CA--A---ATGTTT-----CC--T---TAGTATA--AAATTTTTTTGGT--GCAC-AT--C--AAAAAAATTATTGCATTAAGAATTATTATTTGAGTCATC-TTTGTAGGATTG--TATA----ATGTTTCAAGa
gi|27 : taaGTTCCATTGATTCT--TG---CCG-CT-AAGGGGTACAA-GATTTGCACAT----GT----GC--ATTAT------CTGC---CGCATATTTCTGCAACCAGATCT-------CA---AAT-TTA----AAT-ACAAATATC-TAAGTGTTAtgcat
gi|28 : TGTCTTCCCAT-GATTCA--TC---TCT-CC-AAAG--TTCAT-GATTCGCATAT----GA----AC--ATTAT------TTCC---AGAATATTTCTGCAATTAGATTT-------CC---AAT-TCA----ACA-ACAAAAggccataataaa
gi|29 : tTGTTGTTTCATTGAATGG--TG---CAT-CT-TAGA--TGGGA-GATTCACACAT----GC----GA--AT-AT------CTGC---CACATATTTCTGCAACCAGATTT-------CA---GATGTTGCCATAGT-ATAAAAATtcaaaaattgggatataa
gi|3 : cGTTGTTCCATTGATTT---TG---CCC-CT-TAGA--TGTGA-GATTCGCACAT----GC----AC--ATTAT------CTGC---CTCATATTTCTGCAAC-AGATTT-------CA---AAT-TTA----AAC--CAAA--TT-TAAGTGTTACACATAAAAACAATAAAAAAAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCTAAACCAGCCTTGTCTGTCAAAATC--ATG--AAAACAATTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCAGG-GTCGATAC-----TGTACTGTTCTACAA--TAA-TTT-AGGA-TA-T-TCC-CC-TGTGTATTAAATG-TTTT---TTA---G-----AA-----TG---TTTC--A------CTATTTAATATTA-T-TGTTAGCACATTTT--TAACCTGACCAATAT-T-AAA-AA--TGACATATT-T--T--CA--A---ATGTTT-----TC--T---TAGTATA--ta
gi|3 : TC-ATTGTAGGATTATATATATGTAATATCTCAAGGCCATATAAACACTT-TGGAAAAAAATTGCACTTTGTTTCACTCTT---AATGGGGTTGCTGTCATGAGGA-TT-AGGACACAGATACAC-ACACGC--GTGT--GCACACATATAATATGTTATTGATGTTTT-TAGATTGGCCTTTA-TTGAATTGACCAGCATACAGTGTTGCTTAACTTTCCGACGAATAGTATAATCAAAGGAGATAATCA-AGCATCCGAGAATGCA---CAGACATTTTT-TTG-TTGGTTCTGT--ACTTGGAAGTGTTTAAAAGGGCA--TTTTTTACATTAACTGACAGGAATAT-TTGTGA--------------TTTTTT--T--------------------GG------------AGTAT---Tttcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttggagtatttttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|3 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatatGAGTA--TTTTTTTCTCTCAA--ACAC-AATAT-TTG--A--------------T----------------------------AA------------ATTAC---TCATC--T--TTTA--TCTGTT--TTTTTTT-CACA---TTT-TT-C--TT--GGCTTTACATGAGAATCGAGATTCTGTCAACAACTTATACAATATCTGGATG--------CTACAA-GTA--GTCAAG-CAA--GTATGGAATCTA---CAAG-ATTGTCGAGGAGAC-AAAtttttctctcaaacacaatatttgataaattactcatcttttatctgtttttttttcacatttttcttggctttacatgagaatcgagattctgtcaacaacttatacaatatctggatgctacaagtagtcaagcaagtatggaatctacaagattgtcgaggagacaaa
gi|30 : gttgttccattgattttgccccttagatgtgagattcgcacatgcacattatctgcctcatatttctgcaacagatttcaaatttaaaccaaatttaagtgttacacataaaaacaataaaaaaataacaaacaaaactgatattccagcaaaatattacatttctaaaccagccttgtctgtcaaaatcatgaaaacaatttctcattgattcgtcccctctgattggttgcttaaaatatccacaatggggaagtccagggtcgatactgtactgttctacaataatttaggatattcccctgtgtattaaatgttttttagaatgtttcactatttaatattattgttagcacatttttaacctgaccaatattaaaaatgacatattttcaaatgttttcttagtatattcattgtaggattatatatatgtaatatctcaaggccatataaacactttggaaaaaaattgcactttgtttcactcttaatggggttgctgtcatgaggattaggacacagatacacacacgcgtgtgcacacatataatatgttattgatgtttttagattggcctttattgaattgaccagcatacagtgttgcttaactttccgacgaatagtataatcaaaggagataatcaagcatccgagaatgcacagacatttttttgttggttctgtacttggaagtgtttaaaagggcattttttacattaactgacaggaatatttgtgatttttttgTCGTCCAAAAACTTGTACAATATTCGGAC
gi|31 : attattttacattttcagttatacagtctagttgataaataaCTAAAAACTTGTACAATATCCAGACA--------CAACAA-TTA--GTTTAG-TGA--GCATGAAATCCACATCGAG-Aatgataaaacttcaataaaggcatg
gi|32 : aggttgatgataaacaatagtCAACAACTTGTACAATATCCGGATG--------CCAAGA-ATA--GTCATG-TGA--GCACGGAATCTA---CGAG-ATTGTCGAGGGGAT-GAATCAATGAGa
gi|33 : tGA--ACATGGAATCCA---CGAA-TTTGTCGAGGGAAC-TTATCGACGAAAAAGAACAGATTGTTGAGAATAAG---ACCTA
gi|35 : aaaatttcaaatATGG-ATA--GTTGGG-CAA--GCACGGTTGCTG---CGAG-ATTCTTGAAGGGCG-GAATCAATGAGAAGGAATGAATCTACGAGAAT
gi|36 : acaACAATATCCGGACG--------CTACGA-ACA--ATCCCA-CGA--GTGCGAAATCCA---CGAG-AGTGTCGAGGGAAC-GAATCAAT
gi|38 : aAAAAAA--GCATTTTATTTCACTCTTCTTGACTGGACCCCCTTCAAGAGGACTTAAAGACACt
gi|39 : TGTTGTTCCACTGATTCA--TC---CCC-CT-AAGG--TG
gi|4 : tTGTTCCATTGATTCA--TA---CCC-CT-AAGA--TGCGA-GATTCGCACAT----GC----GA--ATTAT------CTGC---CGCATATTTCTGCAACCAGATTT-------CC---AAT-TTA----AGT-TTAAAAATCATAAGTGTTACGGATACAAACAATAAAA-AAT-AACAAACAAAACTGATATTCCAGCAAAATATTAC----ATT------TCGTAACCAGCCTCGACTGTCAAAATC--ATG--AAAACACTTTCTCATTGAT---TTGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---C---C-AA-AATG-GGGAA-------GTCCAGG-TCCAATAC-----TATAATGTTTGACAA--TAA-TTC-AGGA-TA-TCC-C-CC-TGCATATTAAATG-TTCT---TAA---G-----AT-----GG---TTTC--A------C----TAATATTATT-TTTTAGTGCATTTT--GAACTTAACCACTAT-AAAAA-AA--TAACATAAC-T--T--CA--A---ATGTTT-----TCA-T--GGA--ATA--AAAAACTAGTGGT--AAAC-AA--A--AAAAAGTTTATTGCATTAAGAATTGTGGTTTGTGTCATCATTTGTAGGATCG--TATA----ATATCTCAAGTGCATGTAAACACTT-TGGAAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCTGTCAAGAGGACTT-AGGACACAGATACAG-ATGCAC--GTGC--ACACA-----------TTATTGACAGTTT-TAAATTAATCTTTA-TTGAATTGACAAGCTCGCAGTATTACTTAACTTTTCG
gi|5 : GTTGTTCCATTGATTCA--TG---CCC-CT-AAGG--TGCTA-GTTTCCCACAT----GC----CC--ATTAA------CTGC---TGCATATTTCTGCAACCAGGTTT-------CA---AAT-TTA----AGT-ACAAAAATC-TAAGTGTTGCGCATACATACAATGAAA-AAT-AACAAACAAAACAGATATTCCAACAAATTATTAC----ATT------TCGTAACATGCCTTGACTGTCCAAATC--AT---AAAACGCTTTCTCATTGAT---TCGTCCCC-TCTGATTGGTTGCT-TA----AAATA---T---T---C-AC-AGTG-GGGAA-------GT---GG-GCCGATAT-----TATACTGGTTGAC-A--CAATTTT-AGGA-TATT-T-C-CC-TGTGTATTAAATG-TTTT---TTA---G-----AC-----GT---TTTC--A------CAATTTAATATTA-T-TTTTAGCGT--------------ACCACTGA-AAAAACAA--CAACAAAAT-T--T--C---G---TTGTTTTTTTCTCA-TACACAATATATTATAAATTA
gi|5 : TTA--T--------------------AA------------ATTAC---TCTTG--AAAT--A--CCTGTT--TTT-TTT-CACA---TTT-TT-CTTTT--GGCTTTACATTTGAA--GCGATTCATCCAACAACTTGTACAATATACGAACG--------CTACGG-ATA--GTTGCG-CGA--GCAGGGAATCTA---CAAG-ATTGTCGAGGGGAT-GAATAAGTGAGAAGAAATGAATCTATGAAATTAAG---GCATAActcttgaaatacctgttttttttcacatttttcttttggctttacatttgaagcgattcatccaacaacttgtacaatatacgaacgctacggatagttgcgcgagcagggaatctacaagattgtcgaggggatgaataagtgagaagaaatgaatctatgaaattaaggcataaattgttaatgacaaataaag
gi|6 : gttgttccattgattcatgcccctaaggtgctagtttcccacatgcccattaactgctgcatatttctgcaaccaggtttcaaatttaagtacaaaaatctaagtgttgcgcatacatacaatgaaaaataacaaacaaaacagatattccaacaaattattacatttcgtaacatgccttgactgtccaaatcataaaacgctttctcattgattcgtcccctctgattggttgcttaaaatattcacagtggggaagtgggccgatattatactggttgacacaattttaggatatttccctgtgtattaaatgttttttagacgttttcacaatttaatattatttttagcgtaccactgaaaaaacaacaacaaaatttcgttgtttttttctcatacacaatataTT-----TCA-T--AT--TATA--AAACATTAGTGTTTAAGAC-AT--G--ACAAAGTTTATTGCATTATAGGTTTTGGTTTTAGTCATC-TTTGTAGGTTTGTGT-TA-----TATCTCAAGGTCATATAAATACTT-TGGAAAAAAATTGCACTTTATTTCACTCTT---AACAGGGCCGCCCTCAAGAGGACTT-AGGACACAGATACAC-ATGTGCATGTGC--GCATATATATAAT-TATTATTGATTTTTT-TAAATTGGCCTTTA-TTGAATTGACCAGCATGCAGTGTTGCTTAACTTTTCGACCGATAATATAATAAAGGCAGATAATCA-AGCATCC-AGAATGTACCACAGACA--TTT-CTG-TTGGTTCTGT--ACTTAGAAGTGTTTAAAAGGAGA--TTTTTTACATTTAATG--AGAAATAT-TTGTGATTTTGGAGTATTTTTTTTTT--C--------------------AATCATTTTATTTTATTAC---TCATCTTA--T--A--CCTGTC--CT--TTT-CACA---TTT-TC-C--TT--GGCTTTACATGAGAATCGAGATTCGGTCAACAAATTGTACAATATCCAGATG--------CTACGA-ATA--GTCGCACCAA--GCAAGGAATCTA---TGAG-ATTGTCGAGGGAAC-AAATCAATGAGAAAGACCGAACCTATGAAAATAAG---GCATattgttaatgacaaataaag
gi|7 : gaTTGTTCAATTGATTCG--TG---CCC-CC-AAGG--TACGA-GATTTGGGCAT----GC----GC--ATTAT------CTGC---TGCATATCTCTGCAACCTGATTT-------CA---AAT-TTA----AAT-ACAAAAA-C-TAAGTGTTACACATACAAACAATAAAA-GAT-AACAAACAAAACAGATATTCCAG-AAATTATTAC----ATT------TCGAAACCAGCATTGACCGTCGAAACC--ATC--AAAACGTTTTCTCATTGAT---TCGTCCCC-TCTGATT-GTTGCT-TA----AAATA---T---C---C-AC-AATG-GGGAA-------GTCCTGG-GCCGATGA-----TATACTGTCTGACAA---AA-TTTGAGGA-CA-T-T-CTCC-TGTGTATTAAATG-TTTT---TTA---G-----GT-----GT---TTTC--A------CTATTTAATATTA---ATTTAGCGCATTTT--GAACCTGACCACTGTAAAAAA-AA--TAACATAAT-A--A--TA--A---AAATTC-----CCA-T--ACA
gi|7 : A--------------TTATTTAAT--------------------AA------------CTAAC---TCATCTTA--T--A--CATTTT--TT--TTT-CACAATTTTTATT-T--TT--GGCTTTATGTGAGAATTGAGATTCGGCCAACAACTTGTACAATATCTTAAAG--------CTATGA-A----------------ACACAGAATCTA---CGAG-ATTGTCAAGGAATC-AAATCAATGAGAAGGAACAAATGTATGAAAATAAG---ACATActttattatttaataactaactcatcttatacatttttttttcacaatttttatttttggctttatgtgagaattgagattcggccaacaacttgtacaatatcttaaagctatgaaacacagaatctacgagattgtcaaggaatcaaatcaatgagaaggaacaaatgtatgaaaataagacata
gi|8 : ttgttcaattgattcgtgcccccaaggtacgagatttgggcatgcgcattatctgctgcatatctctgcaacctgatttcaaatttaaatacaaaaactaagtgttacacatacaaacaataaaagataacaaacaaaacagatattccagaaattattacatttcgaaaccagcattgaccgtcgaaaccatcaaaacgttttctcattgattcgtcccctctgattgttgcttaaaatatccacaatggggaagtcctgggccgatgatatactgtctgacaaaatttgaggacattctcctgtgtattaaatgttttttaggtgttttcactatttaatattaatttagcgcattttgaacctgaccactgtaaaaaaaataacataataataaaaattcccatacactttGTTGTTCCAATGATTCA--AG---CTC-CT-AAGG--TGCAA--ATTTGCACAT----CC----GC--ATTAT------CTGC---CACATATTTCTACAACCAGATTT-------CC---AAT-TTA----AAT-ACAAAAATC-TATGTGTTACACATACAAACAATAAAT-AAT-AACAAAGAAAACTGATATTCAAGCAAATTATTCC----ATT------TTGTTACCTGCCTTGACCTTCAAAATC--ATG--AAAACACCTTTTCATTGAT---TC-T--------------TTGCT-CA----AAATA---T---C---C-AC-AATA-GGGAA-------ATCCAGG-GCCGATAA-----TATTCAATTCAACAA--AAA-TTT-ATGA-TA-T-T-C-TC--ATGTATTAAATG-TTTT---TAA---G-----AC-----AT---TTTC--ACTAGATCTATCTAATATTA-C-ATTTAGCGCATTTT--GAACCTGAGCACTAT--AAAA-AA--TAACATAAT-TAAA--AA--A---AAATTC-----TCACT--ATTTTATA--AA
gi|8 : TTTTA--T--------------------AA------------ATTAC---TCATC--A--T--A--CC---T--TT--TTC-CATATTTTTT-TT-T--TT--TGCTTTACCAGACACTCGAGATTCGGCCAACAACTTGTACAATATCCGAACG--------CTACGA-ATA--GCCGCG-CGA--GCACGGAATCTA---CAAG-ATAGTCGAGGGGAC-AAATCAATGAGAAGGAACGAATCTATGttactcatcatacctttttccatattttttttttttgctttaccagacactcgagattcggccaacaacttgtacaatatccgaacgctacgaatagccgcgcgagcacggaatctacaagatagtcgaggggacaaatcaatgagaaggaacgaatctatg
gi|9 : gttgttccaatgattcaagctcctaaggtgcaaatttgcacatccgcattatctgccacatatttctacaaccagatttccaatttaaatacaaaaatctatgtgttacacatacaaacaataaataataacaaagaaaactgatattcaagcaaattattccattttgttacctgccttgaccttcaaaatcatgaaaacaccttttcattgattctttgctcaaaatatccacaatagggaaatccagggccgataatattcaattcaacaaaaatttatgatattctcatgtattaaatgtttttaagacattttcactagatctatctaatattacatttagcgcattttgaacctgagcactataaaaaataacataattaaaaaaaaattctcactaTCCATTGATTCG--TG---CCC-CA-AAGG--TGTGA-GATTCGTTGAT----GT----GC--ATTAT------CTGC---TGCATATTTCTGAAACCAGATTT-------AA---AGT-TTA----AAT-TCAAAAATC-TAAGTGTTACATAT----ACAATAAAA-AAT-AACA---AAAACTGATATTCAAGCAAATTATTATAA--ATT------TCATAACCTGCCTTGACCATCGAAATC--ATG--AAATCGCTATTTCATTGAT---TCATCCCA-TCTGATTGATTGCT-T-----AAATA---T---C---C-AC-ATTG-AGGAA-------ATCCAGG-GCCGACAA-----TATACTGTTCAACAA--AAA-TTT-AGGA-TA-T-T-C-CTATGTGTATTAAATG-TTGT---TTATACGTTTATAC-----GT---TTTC--A------CTATTTAATATTA-T-TTTTAGCATATTTTTAACACCTGACCCCTAT-A----------AACATAATCC--T--CT--T---TTTTTC-----TCA-T--ACACTATA--
gi|9 : cA--------------TATCTT--T--------------------AA------------ATTAC---TCTTC--A--T--ATACCTGTT--TT--TTTTCACA---TTT-TT-C--TTTTGGCTTTATATGGGAATCGAGATTCGCCCAACAACTTGTACAATATCCGAACACTAATAGTCTATGA-ATA--GTCATG-CGA--GCATGGAtctttaaattactcttcatatacctgttttttttcacatttttcttttggctttatatgggaatcgagattcgcccaacaacttgtacaatatccgaacactaatagtctatgaatagtcatgcgagcatggact
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34 ): TACAGGATTGCCGAGGGCATGGGTAAGTGAGAAGACATAAATAAATGAAAAGGTGCAAATCAGAAGTGAATGATACATAATC
Unaligned ( gi|37 ): AGTTGATGATAAACAATTGCATAAAAACTTGTACACTATTTGGACACAAAAAATAGTTAAATG