lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 44444 666666666666666666666666666666666666666666666666666666666666666666666 1 999999999999999999999999999999999 1 5555555555555 1 11111111111111 2222222222222222222222222222222222 33333333333333333333333333333333 22222222222222222 33333333333333333333333 1111111 1 333333333 1 333333333 6666666666666666666666666666666666666666666666666666666666666666 1111 111 1 444444444444444444444444444444444444444444444444444444444444444 44444444444444444444444444444444444444 2222222222 111111111111 22222222222222222222222 1111111 33333 111111 11 1 111111 1 1 11 11111111 111 2222 33333333333 33333333 1 222222 22222 22222 1 55555555555
lowQualScore : 55555 7 999999999999999999999999999999999999999999999999999999999999999999999 7 6 888888888888888888888888888888888 1 4 5 3 0 1 0000000000000 666 3 9 99999 1 1 44 6666 44 7 5 5 3 3 11111111111111 555 8888888 0 999 33 33 6666666666666666666666666666666666 66666666666666666666666666666666 888888888888 55555555555555555 00000000000000000000000 1111111 2 3 111111111 4 3 5 6666 222222222 7777 0 9999999999999999999999999999999999999999999999999999999999999999 2 77 555 3333 3 0 2 222 2 1 1 2 33 444444444444444444444444444444444444444444444444444444444444444 5555 77777777777777777777777777777777777777 2 33 9 9999999999 2 2 222222222222 777 2 5 2 44444444444444444444444 2 0000000 3 77777 2 555555 5 44 0 888888 6 2 6 5555 00 4 2 2 7 11111111 2 0 2 111 0 2 3 4 3 5555 5 33333333333 5 2 6 2 2 3 55555555 5 999999 7 888888 0 00000 6 44 4 22222 4 4 7 66666666666
lowQualScore : ..... . ..................................................................... . . ................................. . . . . . . ............. ... . . ..... . . .. .... .. . . . . . .............. ... ....... . ... .. .. .................................. ................................ ............ ................. ....................... ....... . . ......... . . . .... ......... .... . ................................................................ . .. ... .... . . . ... . . . . .. ............................................................... .... ...................................... . .. . .......... . . ............ ... . . . ....................... . ....... . ..... . ...... . .. . ...... . . . .... .. . . . . ........ . . . ... . . . . . .... . ........... . . . . . . ........ . ...... . ...... . ..... . .. . ..... . . . ...........
lowQualScore : 55555 3 000000000000000000000000000000000000000000000000000000000000000000000 1 0 999999999999999999999999999999999 1 4 1 7 3 0 7777777777777 444 6 0 11111 4 8 55 5555 66 1 7 7 1 7 00000000000000 000 1111111 2 333 77 99 0000000000000000000000000000000000 11111111111111111111111111111111 333333333333 11111111111111111 66666666666666666666666 4444444 2 1 777777777 7 1 5 5555 000000000 5555 4 6666666666666666666666666666666666666666666666666666666666666666 4 66 888 8888 1 3 8 444 9 4 2 7 77 111111111111111111111111111111111111111111111111111111111111111 3333 44444444444444444444444444444444444444 2 22 4 5555555555 4 4 111111111111 999 5 0 5 11111111111111111111111 5 2222222 1 88888 7 666666 5 44 8 666666 8 5 1 3333 88 0 7 7 3 99999999 9 1 9 888 9 5 5 7 1 5555 7 11111111111 7 9 5 9 9 1 77777777 0 000000 6 888888 5 88888 7 66 4 22222 4 2 0 33333333333
consensus : GGAAATTTTATTTTAATTTCAAATGCTATNTATATTTTGTTTATGGTAGTATNNACATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TC-A--AA-C--GTGTCACTAT---T-GCCACT-----TGTCAAACGGTATTCGCGCT-CTTTAATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACA-GCAGNAA------A-------GGACAA---GGAA----A--GTACAAGTG---GG-CGGA--GTC-------------A-------A-------A----TTGGC------------GCC-GCCG------A-----ACA----CC------TGCAC---A------A------TTTT--------C-T-------T----GTC--CC--AAATTTTTAAATTT-GTTTT-GTGTT--ATTTTTA-ATCAATAAACTGATAATAATTAT----TCATAAT-TGT-NAAAAAAAT-G-AAATTC-------------AT----------A---GT----------------------A----------ATATCA---ATATTTTCA----TATA-TATTTCTTTATTACATT-AAACACCAT-ACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAATTT-GAAT---A----------------------ATATTT-GCACCAGTCTAG--TTA-ATAAAT-NG-AA----G-AC-TTCCGGT------------TTAACGAAAAG-TTT-TGT-T--------G--------------TTT-TCC-----CATTTGGAAGTNACAGAATACACAATAATAC-CA--AA-A--G---GGTTTATAAACTGTGTTTATTAAATAG-----AAATCATAAA-ATATAAAGCATGTAAGACA----TGTTTAAAACTTCCTGTGCTTNTTGCAC-T-ACGTTCAAGATGA---TAGTCG-TCAGAAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGT-TTG-GGGGAAAC-TC--CGACGAG-ACCTGAA-A-AATAAAAT-T-A-TTTTTTCTATA---CCN-TAGTATAA----CACGCACCCCTGTTTNAGAC------CTTAAAA--ACTTG-GG--AAAAAAC-T-----G-CGGNTTATAAT--CG-GCTA--TTTACGGTA
Reference ( gi|1 ) : GGAAATTTTATTTTAATTTCAAATG----ATATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCGTCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCAACGAGGTTCTAAACACCTACATC-C--A--C--GTGTCACTAT---T-GACACT-----TGTCAAACGGTATTCGCGCT-TTTTAATT----CAAGATCA--AAGAGATGTCAATTACTTTCAATTAACAGAGTGATAATCC-GACA-GCAGTAA------A-------GGACAA---GGAA----A--GTACAAGTG---GG-CGGA--GTC-------------A-------A-------A----TTGGC------------GCC-GTCG------A-----ACA----CC------TGCAC---A------A------TTTT--------C-T-------T----GTC--CC--GAATTTTTTAATTT-GTTTG-GTAAT--ATTCTTA-ATCAATCAACTGATAATAATTAT----TCATCAG-TGT-TAAAAAAAT-G-AAATTC-------------AT----------A---GT----------------------A----------ATATCA---ATATTTTCA----TATA-TATTTCTTTATTACATT-AAACCCCAT-ACAATTA--TC-----------C--------------T--------------GT--------------------A----AAAATAGTGAATTGAACAGATGTT-GAAT---A----------------------ATATTT-GTACCAGTCTAG--TTA-ATAAAT-TG-AT----G-AC-TTCCGGT------------TTAGCGAAAAG-TTT-TGT-T--------G--------------TTT-TCC-----CATTTGGAAGTTACAGAATACACAATAATACATC--AA-A--G---GGTTTGTAAACTACGTTTATTTAATAT-----AAATAATAAA-ATATAAAGCATGTTAGACA----TGTTTAAAACTTTGTGTGCTTTTTGCAC-T-ACGTTCAGGATGA---TAGGCA-TCAGAAATACTGTTCTCGACTGGCCTTTGTTGACGATCGCAAAGT-TAG-CGGGAAAC-TG--GGATGAA-ACCTGAA-A-AATAAAAT-T-A-TTTTTTCTATA---ACA-TACTATAA----ACCGCACCCCTGTTTCAGAC------CTTAAAA--AACTG-GG--AAAAAAC-T-----G-CGGTTTTTAAT--TG-GTTA--TTTACGGTA
gi|3 : GGAAGTTTTATTTTAATTTCAAATG----CTATATTATATTT-------TGTTTACATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-ATCAAAACCCTCATAACCATCTCCTTTGTTATCACTGC-----------CG--------AGCAACTATAACACGTTCTAAACCCCTTTTC-ACCAACGAGGTTCTGAACACCTAC--T-C--A--TTGGTGTCACTAT---A-GACACT-----TGTCAAACAGTATTTGTGCT-TTTTAATT----CAAGATCA--AAGAGATGCCAATTA----------ACAG--TGATATTCC-GACG-GCAGTAA------A-------GGACAA---AGAA----G--GTACAAGTG---GG-CGGA--GTC-------------A-------A-------A----TAAGC------------GTT-GCCG------A-----ACA----CA------TGCAC---A------A------TTTT--------G-T-------T----CTT--CC--GAAGTTCTAAATTT-GTTTT-GTGTC--ATTTTTA-ATCAATAAACCGGTAATAACTTT----TCATAAT-TGT-AAAAAAAA--G-CAATAC-------------AT----------AATTGT----------------------A----------AAA--A---ATAGT--AA----TATA-TATTACATTAT--CATT-AAA----AG-GCGAGT----------------------------------------------GT--------------------A----AAAACAGCAAATTTAACAGAATTT-GAAT---A-------------------------TTT-GCACCAGTCTAG--TGA-ATAAAT-AG-AA----G-AC-TTCCGGT------------TTAGTGAAAAG-TTT-TGT-T--------G--------------TTT-TTC-----CATTTGGAAGTTACAGAATACACAATAATACCAA--AA-A--G---GGTTTATAAACTTTGTTTATTAAATAG-----AAATCATAAA-ATATAAAGCATGTCAGACA----TGTTTAAAACTTCATGTGCTTTTTGCAA-T-ACGTTCAAGATGA---TAGGCA-TCAGAAATACTGTTCTTGACTGGCCTTTGTTGAGGATCACAGTGT-TAG-TAGGAAAC-TC--TGATGAA-ACCTGAA-A-AATAGAAT-T-ATTTTTTTCTATA---CCT-TAGTATAAT---ACAG-ACCCCAGTTTTAGAC------TTTTAAA--ACTTG-GG--AAAAAAC-T-----G-CCGATAATAATCATA-G--A--TTAACGGTA
gi|36 : GGGAATTCTATTTTCATTTCAAATGCTATATATATTTTGTTTATGGTAGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCATCTCGTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCACTTCTC-ACCAACGAGGTTCTa
gi|57 : GGAAATTTTATTTTAATTTCAAATG----CTATAT
gi|37 : GAAATTTTATTTTAATTTCAAATGCTATATATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAA-CCCTCAAAATCATCTCCTT-----------C-----------CA--------AGCAACAACAGCACGTTCTAAACCCTTTCTC-ACCAACGAatac
gi|9 : ACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------GATGTTGCTGAGCAACAAGAATACATTCTAAACCCCTTCTC-ACCGGCAAGGTTCTCAACATCTAC-TCAA--A--C--GCGTCACTAC---T-GCCACC-----TGTCAAACGGTACTCCCACT-CTTTAATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGAAAAACT-GACA-TCAGTA-------------------AA---GGAA----A--GTACAAGTG---GG-TGGA--GTC-------------A-------A-------A----TTGGC------------GCC-ACTG------A-----ACA----CC------TGCAT---C------A------TTTT--------C-T-------T----GTC--CC--AAATTTTTAAATTT-GTTTT-GTGTT--TTTTTTA-ATCAATAAACAGAAAATAATTAT----TTATAAC-TG--TAAAAAAAT-G-AAATTC-------------AT----------A---AT----------------------
gi|14 : aacgtttttatgtgatatatggtgggttagagataataaaacctgcgagtataaaatggtgttaccgaaatcatttttatgtgtacatgtatttgggcaagataaaagggaaattaaaaacaaactattgacaatttttttaagtgcatctttctagaccatcaccctctcactgcatctgcatcattgagcagtctctgatgtctgACTCATCAAAACTCTTTAAGTCATTTCCTT-----------CAATGT------CC--------AGCAACAATAACATATTCTCACCTCCTTCTC-ACCCACCAGGTTCTCAACACTTAC--C-C--AAAC--GTGTCACTAT---TTGCCACT-----TGTCAAACAGTATTCGCACT-CTTTAATT----CAAGATCA--AGGAGATGTCAAT-AGTTTCAACTAACAGAGTGGTAATCC-GACT-GTAGCAA------A-------GGACAA---GGAA----A--GTACAAGTG---GG-C--A--GTC-------------A-------A-------A----TTTGT------------GCT-GCCA------A-----ACA-------------------------------------------------------------------C--AAATTTTTAAATTT-GTTTT-GTGTT--ATGTTTA-ATCAATAAACTGATAATAATTAT----TCATAAT-TGTAAAAAAAAAT-G-AAATTC-------------AT----------A---AT----------------------tgtaaaaaa
gi|12 : aagataaaagggaaaattaaaacaaactattgacaattttttaagtgcatctcaatagaaatatttgggtcctaaaaaggggcaatcaccctctcaatgtatctgcatcattcagcagtctctgatgtccgACTCATCAAAATC-TCAAAATCATCTCCTTAGATGTCGCTGT-----------CA--------AGCAACAATAACACGTTTTCAACCCCTTCTCGACC-ACCAAGTTCTCAACACCT--ATT-CAAA--G--GTGTCACTGT---T-ACCACTGCCACTATCACATGGTATTCCCACT-CTTTAATTCTGACAGCAGCA--AAG-GATG
gi|2 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcct-ATCAAAACCCTCAAAGTCATCTGCTT-----------CGATGTCGTTGTCA--------AGCAACGGTAACAGGTTCTCAACCCCTTCTC-ACCCACCAGGTTCTCAACACCTGC-TC-A--AA-C--ATGTCACTTT---T-GCCACT-----TGTCAAACGGTATCTGCACTCTTTTAATT----CAGGATCA--AAGAGATGTCACTTAATTTCAATTAACAGAGTGATAATCC-GACC-ACAGTAA------A-------GGACGA---GGAA----A--GTACAAGTG---GG-TGGA--GTC-------------A-------A-------A----TTGGT------------GCC-CCTG------A-----ACA----CC------TGCAC---A------A------TTTT----------T-------T----GTC--CC--AAATTTTTAAATTT-GTTTT-GTGTT--AATTTTA-ATCAATAAACTGATAATAATTAT----TAGTAAT-TG--TAAAAA-------------------------AT----------A---GT----------------------A----------ATATCA---ATATTTTCA----TAT----TTTTTTTATTTCATT-AAACCCCAT-ACAATTA--TC-----------C--------------G--------------GT--------------------agaaaagtacaagttggcggagttaaattggcgccgcccaacacctgcacaattttcatgtcccaaattttttaattcgttttgtgttatttttaatcaagtaactgataataattattcataat
gi|8 : cagatgatattcaacaggtaggtactaaataaaacattctgttattagattagattatatgattccacaaagttgaaaactcttcaaatttaaaataattgagtgaaatcttataattactgtatttcccaagtataatccgcaggtgattttgaagccaaaaactggtggaaaaaaagctagcgtacgtctattatccacaggcataagttgtttactacatctgccattttgaaatctggaccaaaatgaaagattagttttgatatttttggagtaacaaaatctagactggtgtactgcatgattttgtaaaaaacgtaggtaaaacgttttgatgtgatataaagtgtgctaaagacaataaaatttgcgagtataaaatggtgttactgtaatttatgtgtatgtgtatttgggtaagtgcatcttttgagaaatattttggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattcagcagtctctgatgtctgattcAATGATAACAAGTTCTAAACACCTTCTC-Attaatggcgagtataaaaat
gi|5 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttCCTCTTCTT---CGACA--GTTCTCATTGCCTAC-TC-A--AA-C--ATATCACTATATTT-GTCCCT-----TATCAAACGGTATTCACACT-CTGTAATT----GAAGATGATGAAGAGATGTCGGTTAGTTTCAATTAACAGAATGATAATCT-GACA-GCAGGAA------A-------TGACTA---GAAA----A--GTACCAGTG---GG-CGGA--GTC-------------A-------ATTTTGTAA----TTGGCTTGCAATTTACTGCC-ACAA------A-----ACA----TC------TGCCC---A------A------TTTT--------G-T-------T----GTC--CC--AGATCTTTAAATTT-GTTCT-GTGTT--ATTTTTA-ATCAATAAACTGATAATAATTAT----TCATAAT-TAT-AAAAAAATT-GTAAATTC-------------AT----------A---ATTGTAAAAAATATTAATTAAGACA----------ATATAA---ATATTTTCAA---TATA-TATTTCTTTATTACATT-AAACACTAT-ATAATTG--TC-----------T--------------C--------------ATTTAATGACGAGCAA------A----AAAATAGTGAATTGAACAGAATTT-GAAT---A-------------------------TTT-GCACCAGTCTAG--TTA-ATA-----G-CA----G-AT-TTCTGGT------------TTAATGAAAAG-TTT-TGT-T--------G--------------TTT-T-T-----CATTTGGAAGTAACAGAATGCACAATAATAC--C--AA-A--GAGTGGTTTATAAACTATGTTTATTAAATAG-----AAATCATAAA-ATATAAAATATGTAAGACA----TTTTTATAATTTCCTGTGCTTATTGCAC-T-TTGTACAAGATGG---TAACCG-TCAGAAATGCTG--------------TTGTTGATGATCGCAAAGT-TTG-GGAGAAAC-TC--AGGCAAG-ACCTGAA-A-AATATAAT-T-A-ATTTTTCTATAC--AC--TAGTATGA----TAGGTACCCCAGTTTTAaacgtgacacaattgtcaagcaccaattggtattctactctttaattgaagataaaatagataataagtttcaattaacagcgtgtcctgaggaaaggacaaggaggcttagtcaattttgtaattgtcatggaacttcttgtcgccaaacaatgacacctgtacataaactttaaattatgtttgtcttagtctttaaacttgttttgagatttttaatccttaaactcatttattcatatttatatataaaaaaaatccaacaatacaaatatttccattttaattaaacaccatacactgatcccatttaatgataaacgtaaaaatagacaaatgaacagaatttgaatatgtgta
gi|8 : cacgtcAACAAG-TTCTAAACACCTTC-TCAA--A--C--GTGACACAAT---T-GTCAAG-----CACCAATTGGTATTC-TACT-CTTTAATT----GAAGATAA--AATAGAT---AATAAGTTTCAATTAACAGCGTG----TCCTG------AGGAA------A-------GGACAA---GGAGGCTTA--GT-CAATTT---TG-T-AATTGTC-------------ATGG----A-------ACTTCTTGTC------------GCCAAACA------ATG---ACA----CC------TGTACATAA------A------CTTTAAATTATGT-T-------T----GTC--TT---AGTCTTTAAACTT-GTTT---TGAG--ATTTTTA-ATCCTTAAACTCAT-----TTAT----TCATATT-TATATATAAAAA----AAATCC-------------------------A---AC----------------------A----------ATACAA---ATATTTCCA----T----------TTTA----ATT-AAACACCAT-ACACTGA--TC-----------CCATTTAATGATAAAC--------------GT--------------------A----AAAATAGACAAATGAACAGAATTT-GAAT---A----------------------ag
gi|53 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttaatgatGGTTCTGAACACCTACATA-C--A--A--GTGTCACTAT---T-GA-ACT-----GGACAAATGGTATTCGCGCT-TTTTAATT----CAAGtgtgta
gi|47 : TTCTCAACATCTAC-TC-A--AA-C--GTGTCACAAT---T-GCCACT-----TGTCAGATGGTATTCACACT-CTTTAATT----C---------AAGAGATGTCAATTA--TTAAAT-------GTGATAATCG-GAC
gi|17 : --A--C--ATGTTAGTAT---T-GTCAAG-----TATGGAAGGGAATTTGCGCT-CTTTAATT----GAAGATCA--A-GAGAT--CAATTAGTTTCAATTAGTGCACTTATAATCT-CACA-GCAGGAA------A-------GGACAA---GGGA----G------AGGTG---GG-
gi|4 : taaCTAC---T-CAAACA-----TGTCACTCAGTATTCGCACT-CTTTAAAT----GAAGATCA--AAGAGATGTTGATTAGTTTCAATTAACAGTGTTATAATCG-GACA-GCAGGAA------A-------GGACCA---GGAA----A--GGACAA-TG-------GGA--GTCAATTTTGTAAATGA-------A-------A----TTTACT-----------GCC-GCCG------AAAATGACACCGTCC------TGTAC---A------ACACATCTTTTAAA-----T-T-------TTG--GTTGGCCAAAAATTTTTTAATTA-GTTT------TTCATCCATACATTAATTAACCG--------TAT----TCATAAT-TAT---AGAAAAT-A-TAATTA-------------AG----------A----C----------------------A----------ATGCAA---GTGTTTCCATAATTATA-TGTTTCCATATTAAATT-GATCACCAT-ACACTTG--CG-----------C--------------TGTTTAATGACAAGCGT--------------------A----AAAATAGTGAATTGAACAGAATTT-GAAT--------------------------ATATAT-ATACAAGTCTAG--TTT-ATAAAT----A-----G-AC-TTCTGGT------------TTAgtgggttagtgttagtggtggaggggggtgtagggggatgggtcggagtcagttttgtaattggcatgcaattaacagccgccaaacattgacaaatgcacataactttcttttttgtcatagagttttaaatttgtttatgtaaattttcaatccataaactgttgtttttttcatagctataaaaaaaatcttacaatatttacatatatatatttaatgacaaccataaaaatagtgaattgatcaggatttaaatatttgtaccagtctagttatacacattatattatagacttgcagtgtatattgttgt
gi|6 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatgtttccaacacTCAA---GTATTTATGCT-TTTTAATT----CAAGATCA--AAGAGATGTCAATTAGTTTTAATTAACAGGGTGATAATCC-AACA-GCAGTAACTGTTAA-------GGACAA---AGAA----A--GTACAAGTG---GG-TGGA--GTC-------------A-------A-------A----TTGGC------------ATT-GCCG------A-----ACA----CC------TGCAC---A------G------TTTT--------G-T-------T----GTC--CC--AAAGTTTTAAATTT-GTTTT-GTGTT--ATTTTTA-ATCAATAAACTGATAATGATTAT----TCATAAT-TGT-TAAAACAAT-G-AAATTC-------------ATAATTGTTAAAA---GT----------------------A----------GTATTAGCTATATTTTCA----TATA-TAATTCTTTATTACATT-AAACACCAT-ACAATTA--TC-----------C--------------TGTTTAATGGCGAGCGT--------------------G----AAAATAGTAAATTTATCAGA-ATT-TA-----A----------------------ATATTT-GCACCAGTCTAG--TGA-ATAAAT-AG-AA----G-AC-TTCGGGT------------TTAGCGAAAAG-TGT-TGT-T--------G--------------TTT-TCC-----CATTTGGAAGTTACAGAATACACAATAGTAC--C--AA-AAGG---GGTTTATAAACTTTGTTTATTAAATAG-----AAATCATAAA-ATATAAAGCATGTAAGACA----CGTTTATAACTTTGTGTGCTTTTCGCAC-T-ATGTTCAAGATG-----------------ATACTGTTCTCGACTGGATTTTGTTGGCGATCCCGAAGT-TTG-GGGGAAAC-TC--CGATAAG-ACCTGAA-A-AA-AAAA----A-TTTTT--TATA---CCT-TAGTATAA----TACGCACCCCTGTTTTGGAC------CTT-AAA--AACTT-GG--GGAAAAC-T-----A-CGGATTATAAT--CATATT---TTTACGGTAtactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatatttggaagtaataaaatacaaaaaaatactaaaaacagtttataaacttggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|55 : caaacccacGGAATTTGCTAT-CTTTAATT----GAAGATCA--AAGAGATGCCAGTTAGTT
gi|12 : agTATCAGTTACTT--GATTAAAA-----ATAACAC-AAAACGAATTAA------AAAATTTGGGACAT---GAAA----ATTGTGCAGGTGTTGGG-CGGC--GCC-------------A-------A-------T----TTAAC------------TCC-GCCA--------------A----CT------TGTAC-----------------TTTT--------C-T-------C----ATC--C
gi|39 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactctttaattctgacagcagcaaaTGATAATCT-GGCA-CCAGGAA------A-------GGATAATGTGGCA----G--ACTCAATTT---GG---AA--ATT-------------AGC-----A-------A----TTTACT-----------GCT-TTTGCATGATG-----ACA----CT------TGTGC---ATTTTAAA------TTTT--------GGT-------T----GTC--AA--GGATTTTTAAATTTTGTTTT-GTTTT--ATTTTTA-ATCCATAAATTGATataattattcataat
gi|12 : TAATTCTGACA-GCAGCAA------A-------GGATGA---GAAA----A--GTACAAGTT---GG-CGGA--GTT-------------A-------A-------A----TTGGC------------GCC-GCCC------A-----ACA----CC------TGCAC---A------A------TTTT--------C-A-------T----GTC--CC--AAATTTTTTAATTC-GTTTT-GTGTT--ATTTTTA-ATCAAGTAACTGATAATAATTAT----TCATttactagcaatggtaattataaaac
gi|35 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactcttC-GACA-GCAGCAA------A-------GGACGA---GGAA----A--GTACAAGTG---GG-CGGA--GTT-------------A-------A-------A----TTGGC------------GCC-GCCG------A-----ACA----CC------TGCAC---G------A------TTTT--------C-T-------T----GTT--CC--AAATTTTTAAATTC-GTTTT-GTTTT--ATTTCTA-ATCAATAAACTGATAACAATTAT----ACATAAT-TGT-AAAAAAAAT-G-AAATTCATAATTGTAAAAAAT----------A---GT----------------------A----------ATATCA---ATA-TTTCA----TATA-TAaat
gi|9 : -------GGACAA---GAAA----ATGATGCAGGTGTTCAG-TGGC--GCC-------------A-------A-------T----TTGAC------------TCC-ACC--------------CA----CT------TGTAC-----------------TTTC--------C-TTTACTGAT----GTC-------AGTTTTTCACTCT-GTT
gi|17 : aacgtttttatgtgatatatggtgggttagagataataaaacctgcgagtataaaatggtgttaccgaaatcatttttatgtgtacatgtatttgggcaagataaaagggaaattaaaaacaaactattgacaatttttttaagtgcatctttctagaccatcaccctctcactgcatctgcatcattgagcagtctctgatgtctgactcatcaaaaccctcaaagtcatctccttcgatgttgctgagcaacaagaatacattctaaaccccttctcaccggcaaggttctcaacatctactcaaacgcgtcactactgccacctgtcaaacggtactcccactctttaattcaagatcaaagagatgtcaattagtttcaattTG---GGTCGGA--GTC-------------AGTTTTGTA-------A----TTGGCATGCAATTAACAGCC-GCCA------A-----ACA----TTGACAAATGCAC---ATA----A------CTTT--------C-T-------TTTTTGTC--AT--AGAGTTTTAAATTT-GTTTATGTAA---ATTTTCA-ATCCATAAACTGTTGTT--TTTT----TCAT-AGCTAT-AAAAAAAAT--------C-------------TT----------A------------------------------------------CA---ATATTTACA----TATA-TAT------ATT----T-AA------TGACAA------------------C--------------C--------------AT--------------------A----AAAATAGTGAATTGATCAGG-ATT-TAA---------------------------ATATTT-GTACCAGTCTAG--TTATACACAT-TATATTATAG-AC-TTGCAGT------------GTAcaaatttttaaatttgttttgtgttttttttaatcaataaacagaaaataattatttataactgtaaaaaaatgaaattcataattgtaaaaaa
gi|11 : taaacatgttagtattgtcaagtatggaagggaatttgcgctctttaattgaagatcaagagatcaattagtttcaattagtgcacttataatctcacagcaggaaaggacaagggagaggtggggtgggttagtgttagtggtggaggggggtgtagggggaTA-ATTAAT-AACAAA-AATAATTGT----TCATAAT-TGT--AAAAAAAT-G-AAATTC-------------AT----------AATTGT----------------------AAAAAATAGTTATATCA---ATATTTTCA----TATA-TATTTCTTTATTACATT-AAACATCAT-ACAATTA--TC-----------CCGTTTAATGGCGAGC--------------GT--------------------A----AAAATATTGAATTGAACAGAATTT-G------A----------------------ATATTT-GCGCCAGTCAAG--TTA-ATAAGT-AG-AA----G-AC-TTCTGGT------------TTAACAAAAAG-TTT-TAT-T--------G--------------T--------------------GTTGCAGAATACACAATTATACCAA--AA-A--G---GGTTTATAAACTTTGTTTATTAAATAG-----AAATCATAAA-ATATAAAGCATGTAAGACATGTTTGTTTAAAACTTTGTGTGCTTTTTGCGCGTAACGTTCAAGATGA---TAGTAA-TCAGAAATACTGTTGTTGACTGGCCTTTGTTGATGATCGCAAATT-TTG-GGGGAAAC-T----GATGAG-ACCTGAA-A-AATAATTT-T-T-TTTTATCTAT----ACATTAGTATAA----TACGCACCCCTGTTTTCGAC------CTT-AAA--AATTG-GG--AAAAAAC-T-----G-CGGCTTATAATCATA-GT----TTTATGGTAtattgttgt
gi|18 : TAATTATAACCGCATAAT-TAT-GAAAAAAATTG-AGA--C-------------A-----------A---TT----------------------A----------A-A-CA---ATATTTTCA----TGTA-TACTTCCATATT-TATTCAAATGCAAT-GCCATTA--TC-----------T--------------T--------------GTTTAATGACAAGTTT------A----AAAATAGTGAATTTAACATTTTTT-GAAT--------------------------AT-TTT-GTACCAGTCTAGTATTA-ATACATGTT-A-----G-AC-TTCTGGT------------TTAT-----AT-TTTATGT-T-----------------------TTT-TTA-----AATGTGGACGTAACAAATTACTCAATAATAC-TA--AA-A--A-------TG--------GCTTATTTACTGTGTGGCAAAC-ATAAC-ATACAAAGCAAATAAGACA----TGTTTAAAACTTCTTGTTCATATTGCAC-T-ACGTTCAAGGTGAAATTTGACA-T---AAAGAC------CGAAAAG--TT------CGAGAGAAACTT-TAGACGGG-ATC-TG------AAA-A---GAA-A-AATA-----T-A-TTTTTTCTGTA---CTT-TGATATTA----CCCACACCTCTGTTTAAGAT------TTTAA
gi|10 : c----------------------A----------AAATGA---ATTTTATCC----TATAATA---CTTTAT-------AAACACCAT-ACAGTTA--TC-----------C--------------C--------------GTTTACCGGTAATGACAAGCGTA----AAAATAATAAATGGAACAGA-ATT-CAA---------------------------ATATTT-GCACCAGTCTAG--TTATAAAAAT-AG-AA----G-AC-TTCCGGT------------TTAA-GAGAAG-TTT--GT-T--------T--------------TTT-TTT-----CATTTGGAAGTAAAAGAATACACAATAATAC-TA--AA-A--AT--GGTTTATAAACTGTGTTTATTAAATAG-----AAATCATAAA-ATATAAAGCATGTAAGACA----TATTTTAAACTTTACATGCTTAATGCAC-T-AGGTTCAAGATCA---CAGTCG-TTAGAAATGTTGCTTT-GACCG-CCATTGTTGAC-ATCG-ATAGT-TTG-GAGGAAAC-TTCCGACT----ACCTGAA-A-AATATAAT-T-A-TTTTTTCTATT---CTC-TAGTATAA----CACGCATTCTTGTTTAAGAT------CTTAAAA--ACTTA-GG--AAAAAA
gi|43 : atgtgtaaaaaccagaaA---ATATTTAAAA---TATA-GATGTCCATATCGGATT-AAGTACTAT-AAAATCA--TC-----------C--------------T--------------TTTTAATGACA-----------AGTTTAAAATAGTGAATTGAACAGAATTT-GAAT---A----------------------AACTTT-GTTTCAGTaatttttgtagttcaaccaaacaaaaatgcgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaagttaaattctacccctgt
gi|54 : aaaagaggacaataattacaaaaA-TATTTCCATATTAAATT-AAATACCAT-ACAATTA--TC-----------C--------------T--------------GT--------------------ag
gi|19 : ATTTCTATATAACATT-AAACCCCAT-ACAATTA--TCACATTTAATAGCAAG-----------C--------------AT--------------------A----AAAATAGTGAATTGAACATAATTT-GAAT---A-------------------------TTT-GTACCAGTCTAG--TTA-ATCAAA-TG-AA----G-TC-TCGCGGT------------TTAACTAAATG-TTT-TGT-T--------G--------------TTT-TCC-----CATTTGGAA---------TACACAATAATACACA--AA-A--G---GGTTTATAAACTGCATTTATTTGATAG-----AAATCGTAAA-ATATAAAGCATGTAAGACA----TGGTTAAAACTTCATGTGCTTTTTGCAC-T-TTGTTCAAGATGA---TAGTCA-TCAGAAATACTGTTGTCGACTGGCCTTTGTTGACTATCGCAAAGT-TTG-GGGGAAGC-TC--TGACGAG-ACCTGAA-A-AATA-----T-A-TTTTTTTTATATATACATTAGTATAA----TATGCACCCCTGTTTttgatgaca
gi|38 : TATTAAATT-AAACAC-AT-ACAATTACCTC-----------CCTTCAAATGAAAAGT--------------AT--------------------A----AAAATAGTGAATTGAACATAATTT-G------A----------------------ATATTT-ATACCAGTTTAG--CT--AT--AT-TA-AT----A-GTATTCCAGT------------TT----AAAAT-TTA-TGT-T--------GACAAAGATGTTGTCTTT-TCA-----CATTTAGAACCAACACAATACACAAAAATt
gi|16 : AT-ACAATTA--TC-----------CAGGTTAAAAGCAAGT--------------GT--------------------A----AAAATAGTGAATTGAACAAA-ATTAGAAT---ATTTGTACCANNNNNNNNNNAGAATATTT-GTACCAGTCTAG--TTA-ATAAAT-TT-AA----G-AC-TTCCGGT------------TTAACGAAAAG-TTT-TGT-T--------T--------------TTT-TCC-----CATTTGGAAGTTACAGAATACACAATA-TACACA--AA-A--G---GGTTATTAAACTGTGTTTATTAAATAG-----AAATCATAAA-ATTTAAAGCATGTAAGACA----TGTTTAAAATTTCCTGTGTTTGTTGCAT-A-ACGTTCAGGATGA---TAGTCA-TCAGAAATACTGTTGCTGACTGGCCT---ATGACGAACGCAAAGTATGG--AAGAAAC-TC--TGATGAG-ACCAGAA-A-AATAAAAT-T-A-TTTTTTCTAT----ACATTAGTATAA----TACGCACACCTGTTTTAGAG------CTTAAAA--GCTTG-GG--AAAAAAT-T-----G-CAGATTATAAT--CG---TA--TTTtggtttaaaaactt
gi|44 : ca--------------GT--------------------A----AAAATAATAAATTTAACAGAATTT-GAAT---A-------------------------TTT-GCACCAGTCTAG--TGA-ATAAAT-AG-AA----G-AC-TTCCGGT------------TTAGCAAAAAG-TTT-TGT-T--------G--------------TTT-TCC-----CATTTAAAAGTTACAGAATACACAATtatactgt
gi|24 : gagc--------------GT--------------------G----AAAATAGTGAATT------AT-TT-G----------------------------------T-GTACCAGTCAAG--TTACATAAAC----A-----G-AC-TTCTGCTTTAAAGATCATGTTAACAAACAG-TTT-TGTCT--------A--------------TTT-T-T-----CATTTGGAATTAATAAAATACACAA-AATATACTGAAA-A--T---GGTTTATAAACTTTGTTTATTGAATAG-----AAATCATAAA-ATATAAACCATATAAAACA----TGTCTAAAACATTta
gi|25 : ----AAAATAGTCAATTGAACAGAATTT-GAAT---A----------------------TTCTTTTGTTCCAGTCTAG--TTA-CT---------T----GTAC-TTTCAGT------------TTA-----AAT-TTTATGT-TTTATAAAAG--------------TTTATCCTTATTCATTTTGAAGTTACAAAATACACAAAAACAC-TA--AATA--T---GGTTTATAAAC-GTGTTTATTTAATCT----------ATAAACATATA---------AGAC------------AACTTCCTGTGCATATTGCAT-T-ACAT---GTATG----TTCGCAGTGAAAAATGTTG--------TAGCA------GACGATTGTAAAAT-TAA-GGGAAAACTTT--TGACGAT-ACCTGAAGA-AAAAAAAT-T-cattgcattgcctgtatactgtgaaagtcctgggaaaatgcttcagacgggaccatatatattttctgttgtctatagtttaacctgcacccctgtttaatcttaaaaac
gi|15 : tAATGGAACAAA-ATT-GGA---------------------------ATATTT-GCACCAATCTAG--TTATATAAAT-AG-AA----G-AC-TTCCGGT------------TTAACGAGAAGTTTT-TGT-T-----------------------TTT-TTT-----CATTTGGAAGTAAAAGAATACACAATAATAC-TA--AA-A--AT--GGATTATAAACTGTGTTTATTAAATAA-----AAATCATAAA-ATATAAAGCATGTAAGACA----TATTTTAAGCTTTTTGTGCTTATTGCTC-T-ATGTTCA------------------AGAAATGCTGCTTTTGAC-AGCTGTTGTTGAC-ATCGATAATT-TGG--GGGGAAC-T----TCTGACTACCTTAA-A-AATATAAT-T-A-TTTTTTCTATA---CTC-TAGTATAA----CACGCATCTCTGTTTAAGAC------CTTAAAA--ACTTA-GG--AAAAAActatactcttagt
gi|31 : aa-GAATTTGA----------------------ATATTT-GCAACAGTCTAG--TTA-GTAAAT-AG-AA----G-AC-TTCCGGT------------GTAATGAAAAG-TTT-TGT-T--------G--------------TTT-TTCT----CATTTGGAAGTTACAGATTATACAATAATACCAA--AA-A--G---GGTTTATCAGCTGTGTTTATTAAATAG-----GAATCATTAA-ATATAAAGCATGTAAGACA----TGTTTAAAACTTCCTGAGCTTTTTGCAC-T-ACGTTC----TGA---TAGTCA-TCAGAAATACTGTTGTCCACTGGCCTTTGTTGAattttttttgcaattcaaccaaacaaaaatgtgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaaaaaagttaaattctaaccctggca
gi|45 : ca-GAATTTGA----------------------ATATTT-GTACCAGTCTAG--TAA-ATAAAT-TG-AA----G-AC-TTCCAGT------------TCAGCAAAAAG-TTT-TGT-T--------G--------------TTT-TCC-----CATTTGGAAGTTACAGAATACACTATAATACACA--AA-A--C---GGTTTATAAA
gi|27 : gatcaGCAAAAAG-TTT-TGT-T--------G--------------TTT-TCC-----AATTTGGAAGTTACAGAATACACAAAAATATACA--AA-A--G---GGTTTATAAACTGTGTTTATTAAATAG-----AAATCATAAA-GTATAAAGCATGTAAGACA----TGTTTAAAACTTCCTGAGCTTTTTGCAC-T-ACGTTCAAG
gi|4 : ctcgcaaattttattgtctctaacacactatatatcacatcaaaactttttacctactttttttacgaaataatgcagtacaccagtctagattttgttactccataaataaccaatcataattATTTGGAAGTAATAAAATACAAAAAAATAC-TA--AA-A--AC--AGTTTATAAACT
gi|30 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatgtttccaacacctactcaaacatgtcactcagtattcgcactctttaaatgaagatcaaagagatgttgattagtttcaattaacagtgttataatcggacagcaggaaaggaccaggaaaggacaatgggagtcaattttgtaaatgaaatttactgccgccgaaaatgacaccgtcctgtacaacacatcttttaaattttggttggccaaaaattttttaattagtttttcatccatacattaattaaccgtattcataattatagaaaatataattaagacaatgcaagtgtttccataattatatgtttccatattaaattgatcaccatacacttgcgctgtttaatgacaagcgtaaaaatagtgaattgaacagaatttgaatatatatatacaagtctagtttataaatagacttctggtttatactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgat-----AAATCATAAA-ATATAAAGCATGTGAGAAA----TGTTTAAAACTTCCTGTGCTTTTTGCAC-T-ACGTTCAAGATTA---TAGTCA-TCAGAAATACTGTTGCCGAATGGCCTTTGTTGATGATCACAAAGT-TTT-GGGGAAAC-CC--TGACAAG-ACATGAA-A-AAAAAAAA-A-A-AAAATTCTAT----ACATTAGTACAA----CACGCACCC--GTTTTAGAC------CTTAAAA--TCTTG-GA--AAAAAAC-T-----G-CAGATTATAAT--C---CTATTTTTATGGTAtggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|29 : agAA-ATATAAAACCTATAAGGCA----TGTTTAAAAC-----ATCCTTCATATTC-T-TCATTTACGGTAA---AAATCG-CCAGAAATGCTGTTta
gi|33 : tgtcttttttgttttggaagtagcaaaatatgtgaaaacagcaaaatatgtgaaaacagtaaaaaatggtttaacagtgttgttaattttttagttatcgtA-ATATAAAGCAAGTAAGACA----TGTTTTAAAATTTCCGTGCTAATTGCAG-T-ACGTTCAAGATCA---CAATCG-TCAGAAATGCTGCTTTTGACC-GCCATTGTTGAC-ATCG-ATAGT-TTG-GGGGAAACTTC--CGACTCT-ACCTGAA-A-AATATAAT-T-A-TTTTTTCTATA---CTG-TAGTAT---------GCACCCCTGTTTAAGAC------CTTAAAA--ACTTT-GG--Agtagtcgagcattaacttctgacggaacaaaatatatttttctgtactcctacctctttttttaataccttaaaact
gi|42 : GTTGATGACTGAAAAGT-T------------TG--GGA-GAA-ACTTACA-ACGATAAAATAT-A-TTTTTCCTATA---ATC-TGATATTG----CCCGCACCCTTGTTTGAGAC------CTTAAAAT-GTCTG-GGGCAAAAAACAT-----G--GGTTtttttttttaattgcagttcaacaaaacaaaaat
gi|40 : GGGAAAA-TG--TCCTGACTACCTGAACA-AATAAAAT-CCA-TTTTGTCCATA---CTC-TAGTTTAACCTAACTGTAACCCT--TTAGGACTAAAAACTTAAAA--AA-----A--GAAAAAC-T-----GCCGGTTatagtctgcagattagggttacagatg
gi|26 : taccggaaatgctgttgtaaaagattaaaatgtttgggaCCAGTTTCGG-C------TTTAAAATCACCTGCGG--ATTATAC-TTGGGTG-CGGTTTATAAT--GG-GAGA--TTTACGGTAata
gi|21 : atttaagttagattttataataaagtcactcttgaagcctcgtgaagtgatttttaaactttttttacattgacCCAGTTTCGG-C------TTCAAAATCACCTGCGG--ATTATAC-TTGGGTG-CGGTTTATAAT--TG-GCGA--TATACGGTAtcgaaaaaagctaatatccgttcataatctgcaggcatgaatcagatgaatcagttgttaactacatctgccattttgacatccggaccaaagtgaaagatgaattttgattggctaattatggagtaacaaattt
16 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|7 ): GCATGTAATTTATGCACAAATGGTTTAACACACAGGCACTGGTCACAATTTTTTTTTTTAGTATATTTGGTCATATAGTATCTATATAGTAGACTGGTCACAAACTCTTTTTTTAGTATATTAAAATTATGGTCATGTAGTACCGTATTTTCCCAATTATAATCTTTACTCAAGTATAATCCGCTGGTGATTTTGAAAGCAAAACTGGTGGGAAAAAGATAGTATACATCTATTATCTGCAGGCATGAATCAATTGTTTACCTCATCCGCCATTTTGAAATTCAGACCAAAGTGAAAGAAGAATTTGGATTGGTTCTTCATGGCGTAACAAAATCAATACTGGTGTACTGCATAATTTTGTAAAAAAACGTAGGTGAAATGTTTTGATGTGATATATAGTGTGTTGGAGACAATAAAATTTGTGAATATAAAATGGTGTTACCATAATTACTTTTATGTGTATTTGGGTAAGAAAAAGTGAAAATAAAAACAAACTATTGACAATTTTTTTAAATGCATCTTTCGAGAAATATTTGGACCATCACCCTTTCACTGTAATTGCATCATTCAGCAGTCTCTAATGTCCGATGCATCAACACTCTCAAAGTCATCTCCTTCAATGACGCTGTCC
Unaligned ( gi|13 ): CCGCAGGTAAAGTTGAAGCCAAAACTGGTCGAAGAAAGCTATTGAACATCTATTATCCGCAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGAACCAAAGTGAAGTATTTTGATTGGCTAATTATGGAGTAACGAAATCAAGACTAGTGAACTGCATAACTTTGTAAAAACGTAGGTAAAAAGTTTTGACGTGATATATAGCATGTTAGAAACAATAAAATTTGCAAGTATAATGTGGTGTTACTATTTTTTATGTGTATTTGGGTAAGACAAAAGGGAAAATACAAACAAACTATTGACAATTTTTTTATGTCCATTTTGTGCAGAACATTTGGGTCCTAAAGAGGACCATCACCCTCTCACTGTATCTGCATCATTCAGCTGTCTCTGATGTCAGACTCATTAAACCTCTCAAAGTCATCTTCTTTGACATCGCTGTCGAACAGATGCCGAAACTGTTCGTCA
Unaligned ( gi|20 ): ATTTACCTTTATGTATATTCATTAAATTTTGATACTGCTTTACCTATTTTTGTCAGAGTTGAACTTAATACAGTATATCTCCAGTTATATTCCGCACTGGAGTATAATCTGCAGGTTATTTTGAAGCCAAAACTAGTGGAAAAAAGCAAGTATACGTTTATTATCCGTAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGACAAAAGTGAAAGATGAATTTTGATTGGTTATTTATTGAGTAACAAAATCTAGACTGGTGTACCGCTTAATTTTGTAAAAAACTTCGGTAAAACATTTTGATGTGATATATAGTGTGTTAGTGACATAAAACTTGCGACTATAAAATGGTGTTATTGAAATATCTTTATGTGTATTTGG
Unaligned ( gi|22 ): TGACCCTAATTTTACTCTATTTCCAAAGTATAATCCGCACTTGAGTATAATCCGCAGGTGATTTTGAAGTGAAAACTAGTGGAAAATTGCTAGTATACATCTATTATCTGCAGGCATGATTCAGTTGTTTACTACTTCTGCAATTTTGAAATCCTTACCAAAGTGAAAGATCAATTTTGATTGGTTATTCATGGAGTAACACAATCTAGACTGGTGTGCTGCATGATTTTGTCAAAAACGTAGGTAAAATATTTTGATGTGATATATATAGAGTGTACTTCAAAATCCCTATGGCTCAAAAATGACATGGTACTCAAAATCCCCTTGATGGGTGGCAT
Unaligned ( gi|23 ): AATCTCCAAGTATAAACCACACCCAAGTATAATCTGCAGGTGATTTTGAAGCCAAAACTGGTCGAAAAAAGCTAGTATCTGTCCATAATCCGCAGGCATGAATCAGATGAATCAGCTGTTTACCACATCCATCATTTTGAAATCCCAACCAAAGTGAAAGATGAATTTTGATTGGCTAATTATTGAGTAACGAAATCGAGACTGGTGTACTGCATAACTTTGTAAAAACGTAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGGAGACAATAAAACTTGCAAGTATAAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGG
Unaligned ( gi|28 ): ATTTATGTTTATTTATAGGTTATTTATTCCTGGTCATATTTTTTTTGTTTTTAAAGGGAATATACCATAAATCTCCTATTATAAACCGCACTCAAGTATAATCCGCAGGTGATTTTGAAATCGAAACTGGTCGAAAAAAGCTTGTATACGTCTATAATCCGCAGGCATGAATCAGATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGATCAAAGTGAAAGATAATTTTTGATTGGCTAATTATTGAGTAACAAAATCTAGACT
Unaligned ( gi|32 ): ACTACCGTAATCGTTTGATTATACCCCTTTGCCAAGTATAACCTGCAGGCTAATTTTGAAGCCAAAACTTGTGAAAAAAAAACTTATATCCATGAATAATACGCAGTTGTTTACTACTGCCGCCATTTTGAAATCGAAAGACAAATTTTGATTGGCTAGATTTTAAGTCACATAATCTAGACTGGCATACTGTTAATTTTGTAAAATCACATGTGATAACTACTATTAAATATTTTGTGTAA
Unaligned ( gi|34 ): TTTTAATTTAGACTTTATGTCATACTTTTGACAAATAACCACAGACCCTGGACTTTTGATTTTAACATACAGTAATCTTCCAATTATAACATGCCACCAAGTATACCCCGCATGCTGATTTTGAAGACAAAATTGGTGGAAAAAAGTAAATATATATCAATTATACACAGCCATTATATCTTCAAATCCAAATCTGTTCGCCATTTTGA
Unaligned ( gi|41 ): CTTTGATCTCTCGAATAAAAGTCTCCTCAGAGTATCACAGACTGATTTTGTATCCAAATCTGGTGGAAACATAGCTCTTGTATCCTGGCATATCACACAGCATGAAATTGAGAGTTTACCATGGCCACCATTTTAAAATCAATACAAAAG
Unaligned ( gi|46 ): CACGGTGAAATTCACCAGAAATGCTATGGTTGATGATCGAAAAGTTCGGAAGAAATGATGTCGGGATCTGAATAGTTAGATATATTTTTGATATTCTAATGATACCTTAAAAAATTTAAGAAAA
Unaligned ( gi|48 ): ATGCAATTCAGTCTTTATTCATGTTCAATTAGTTATATAAAAAAAATTAGATATGCGTACACTCAACTAGTATTTACTGTTGATTGTTACTACCAT
Unaligned ( gi|49 ): GACTATTGCTTATTTTTTTATAAAAATATACCGTAATATTGCAAATATAAGACACCCCAAAGTATCACCTGCAGGCTGATTTTGAGGCAAAGATAA
Unaligned ( gi|50 ): ACTATTGGATAAAATATAGGTAAAACATTTTGATGTGATATATAGTATGTTAGAGACAATAAAACTTGCGAGTATAAAATGGTGTTACCGA
Unaligned ( gi|51 ): GCAGTTCAGCAAAACAAATGCGAGTTGAAAATATTTGCATAGGTTAAAAAAAGCCAGTGGATTAAAAAGTTAAAATTCTACCCCTG
Unaligned ( gi|52 ): ACTACAGTATTTCGCAAATTATAATCTGCACTCGAGTACAATCTGCAGGTGCTTTTGGAGCCAAAACTATTGGATAAAAT
Unaligned ( gi|56 ): AAATCCCCATGGCTCAAAAATGACAAAGTAGTCAAAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 555555555555555555555555555555555555555555555555555555555 1 666666666666666666666666666666666 4444444444444444444444444444444444444444 111111 111111 1111111111111 2222222222222222222222222 11 333333333333333333333333333333 11111111111 222222222222222222222222222222222222222222222222222222222222222 5555555555555555555555555 1111 111111111111 1111111111 111111111 1111 111 111111111 11111 2222222
lowQualScore : 1 8 3 333 777777777777777777777777777777777777777777777777777777777 0 999999999999999999999999999999999 4 8 1 3 3 555 1 77777 0 0 2 6666 44 1 3 5 1 888888 555 6666 777 44 0000000000000000000000000000000000000000 555 3 333333 77777 555555 555555 6666666666666 6666 44 0 44 555 888888 3 3 3 2 33 6666666666666666666666666 5555 33 5555 22 888 666666666666666666666666666666 66666666666 55 555 6 6666 2 2 999 2 0 33 777777777777777777777777777777777777777777777777777777777777777 5555 2222222222222222222222222 2 2 666666 22 5555 55555 2 9 1 000000000000 2 6666666666 2 4 4 2 111111111 2 0 88888 1 666666 2 4444 4 888 0 5555 5555 2 2 2 1 2 2 1 2 1 2 0 2 666 44 3 1 6 33 33 555555555 2 4 2 3 55 2 2 33 888 444 2 1 66 3 44 7777 00000 1 8888888
lowQualScore : . . . ... ......................................................... . ................................. . . . . . ... . ..... . . . .... .. . . . . ...... ... .... ... .. ........................................ ... . ...... ..... ...... ...... ............. .... .. . .. ... ...... . . . . .. ......................... .... .. .... .. ... .............................. ........... .. ... . .... . . ... . . .. ............................................................... .... ......................... . . ...... .. .... ..... . . . ............ . .......... . . . . ......... . . ..... . ...... . .... . ... . .... .... . . . . . . . . . . . . ... .. . . . .. .. ......... . . . . .. . . .. ... ... . . .. . .. .... ..... . .......
lowQualScore : 0 0 2 555 000000000000000000000000000000000000000000000000000000000 0 111111111111111111111111111111111 0 2 9 6 3 888 4 77777 6 9 9 1111 22 8 5 7 0 888888 444 5555 000 22 3333333333333333333333333333333333333333 444 1 111111 77777 444444 555555 5555555555555 5555 22 2 22 444 888888 1 1 1 6 77 7777777777777777777777777 7777 77 7777 33 888 444444444444444444444444444444 00000000000 44 444 2 5555 9 0 666 7 5 44 666666666666666666666666666666666666666666666666666666666666666 0000 7777777777777777777777777 0 0 111111 99 0000 33333 1 9 5 888888888888 1 1111111111 4 7 7 4 222222222 4 1 22222 7 111111 2 5555 4 333 3 3333 0000 4 4 2 0 4 4 3 4 7 5 1 1 222 99 4 7 1 44 44 222222222 4 5 5 1 22 5 5 44 333 777 7 0 88 1 22 1111 00000 0 4444444
consensus : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-AAAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAATTTGAATA-----------------------T-T-TT-GCACCAGTCTAG------T--TA----A-----T-AAATAGAAGACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTTTTCTATA--C-NTTAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATCGGNTA--TTTACGGTA
Reference ( family-188 ) : GGAAATTTTATTTTAATTTCAAATGCTATNT-ATATTTTGTTTATGGTAGTATNNACATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-NAAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAATTTGAATA----------------------ATAT-TT-GCACCAGTCTAG------T--TA----A-----T-AAATNGAAGACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTTTTCTATA--C-CNTAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATCGGCTA--TTTACGGTA
gi|1 : GGAAATTTTATTTTAATTTCAAATG----AT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCGTCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCAACGAGGTTCTAAACACCTACATC-CACGTGTCACTA-T---TGACACT-----TGTCAAACGGTATTCGCGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTACTTTCAATTAACAGAGTGATAATCC-GACAGCAGTAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GT-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCGA--ATTTT---T------TAATTT-GTTTGGTAA-TA-TTCTTAATCAATCAACTGATAATAAT--T-------------------------AT----T--CA----TCAGTGT-TAAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACCCCATACAATTA--TC-----------C--------------T--------------GT--------------------A----AAAATAGTGAATTGAACAGATGTTGAATA----------------------ATAT-TT-GTACCAGTCTAG------T--TA----A-----T-AAATTGATGACTTCCGGT------------T-TAG---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATACATC--AA-A-G-GGTTTGTAAACTACGTTTATTTAAT----ATAAATAATAAAATATAAAGCATGTTAGACA----TG-TTTAAAAC-TTTGTGTGCTTTTTGCAC-T-ACGTTCAGG-ATGATAGGCATCAG-AAATACTGTTCTCGACTGGCCTTTGTTGACGATCGCAAAGTTAGCG--GGAAA--C-T---G-G-GATGAAACCTGAA-AAATAAAAT-T-A-TTTTTTCTATA--A-CATACTATAAA---CC-GCACCCCTGTTTCAGACCTTAAAA--AACTG-GG--AAAA----AACT-----GCGGTTTTTAATTGGTTA--TTTACGGTA
gi|10 : AA----------AATGA---ATTTTATCC-TA----TAATA---CTTTAT-------AAACACCATACAGTTA--TC-----------C--------------C--------------GTTTACCGGTAATGACAAGCGTA----AAAATAATAAATGGAACAGAATTCAAATA-------------------------T-TT-GCACCAGTCTAG------T--TAT---A-----A-AAATAGAAGACTTCCGGT------------T-TAA----------GA-GAAG--TT-TGT-T--------TTTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAAC-TTTACATGCTTAATGCAC-T-AGGTTCAAG-ATCACAGTCGTTAG-AAATGTTGCTTT-GACC-GCCATTGTTGAC-ATCG-ATAGTTTGGA--GGAAA--CTT---C-C-GAC--TACCTGAA-AAATATAAT-T-A-TTTTTTCTATT--C-TCTAGTATAAC---AC-GCATTCTTGTTTAAGATCTTAAAA--ACTTA-GG--AAAA----AA
gi|11 : atgtgtaaaaaccagaaTAATTAATAA--CAAAAATAAT--T-------------------------GT----T--CA----TAATTGT--AAAAAAAT-GAAATTC-------------AT----------AATTGTAAAAAATAGTTATATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACATCATACAATTA--TC-----------C--------------C--------------GTTTAATGGCGAGCGT------A----AAAATATTGAATTGAACAGAATTTGAATA-------------------------T-TT-GCGCCAGTCAAG------T--TA----A-----T-AAGTAGAAGACTTCTGGT------------T-TAA---------CAA-AAAG-TTT-TAT-T--------GT--------------------GTTGCAGAATAC------ACAATT-ATAC--CAAAA-A-G-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACATGTTTG-TTTAAAAC-TTTGTGTGCTTTTTGCGCGTAACGTTCAAG-ATGATAGTAATCAG-AAATACTGTTGTTGACTGGCCTTTGTTGATGATCGCAAATTTTGGG--GGAAA--C-T-------GATGAGACCTGAA-AAATAATTT-T-T-TTTTATCTATA--C-ATTAGTATAAT---AC-GCACCCCTGTTTTCGACCTTAAAA--A-TTG-GG--AAAA----AACT-----GCGGCTTATAATCA--TAGTTTTATGGTAaatttttgtagttcaaccaaacaaaaatgcgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaagttaaattctacccctgt
gi|12 : ACTCATCAAAATC-TCAAAATCATCTCCTTAGATGTCGCTGT-----------CA--------AGCAACAATAACACGTTTTCAACCCCTTCTCGACC-ACCAAGTTCTCAACACCTAT-TCAAAGGTGTCACTG-T---TACCACTGCCACTATCACATGGTATTCCCACTCTTT-AATTCTGACAGCAGCA--AAG-GATG
gi|12 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctTAATTCTGACAGCAGCAA------AGGATGA---GAAA----AGTACAAGTTGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CCA------A-----CACC------TGCAC---A--ATTT---T--------CAT----G--TCCCAA--ATTTT---T------TAATTC-GTTTTGTGT-TA-TTTTTAATCAAGTAACTGATAATAAT--T-------------------------AT----T--CA----TAATagaaaagtacaagttggcggagttaaattggcgccgcccaacacctgcacaattttcatgtcccaaattttttaattcgttttgtgttatttttaatcaagtaactgataataattattcataat
gi|13 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactcttACTCATTAAACCTCTCAAAGTCATCTTCTT-----------
gi|14 : ccgcaggtaaagttgaagccaaaactggtcgaagaaagctattgaacatctattatccgcaggcatgaatcagttgtttactacatccgccattttgaaatccgaaccaaagtgaagtattttgattggctaattatggagtaacgaaatcaagactagtgaactgcataactttgtaaaaacgtaggtaaaaagttttgacgtgatatatagcatgttagaaacaataaaatttgcaagtataatgtggtgttactattttttatgtgtatttgggtaagacaaaagggaaaatacaaacaaactattgacaatttttttatgtccattttgtgcagaacatttgggtcctaaagaggaccatcaccctctcactgtatctgcatcattcagctgtctctgatgtcagACTCATCAAAACTCTTTAAGTCATTTCCTT-----------CAATGT------CC--------AGCAACAATAACATATTCTCACCTCCTTCTC-ACCCACCAGGTTCTCAACACTTAC-CCAAACGTGTCACTATT---TGCCACT-----TGTCAAACAGTATTCGCACTCTTT-AATT----CAAGATCA--AGGAGATGTCAA-TAGTTTCAACTAACAGAGTGGTAATCC-GACTGTAGCAA------AGGACAA---GGAA----AGTACAAGTGGG-C--A--GTCA-------A-------------A-TTTGT------------GCT---GC-CAA------A-----CA------------------------------------------------CAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TGTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGTAAAAAAAAAT-GAAATTC-------------AT----------A---ATtgacatcgctgtcgaacagatgccgaaactgttcgtca
gi|15 : aagataaaagggaaaattaaaacaaactattgacaattttttaagtgcatctcaatagaaatatttgggtcctaaaaaggggcaatcaccctctcaatgtatctgcatcattcagcagtctctgatgtccgAATGGAACAAAATTGGAATA-------------------------T-TT-GCACCAATCTAG------T--TAT---A-----T-AAATAGAAGACTTCCGGT------------T-TAA---------CGA-GAAGTTTT-TGT-T---------TTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGATTATAAACTGTGTTTATTAAAT----AAAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAGC-TTTTTGTGCTTATTGCTC-T-ATGTTCA---------------AG-AAATGCTGCTTTTGAC-AGCTGTTGTTGAC-ATCG-ATAATTTGGG--GGGAA--CTT---C-T-GAC--TACCTTAA-AAATATAAT-T-A-TTTTTTCTATA--C-TCTAGTATAAC---AC-GCATCTCTGTTTAAGACCTTAAAA--ACTTA-GG--AAAA----AA
gi|16 : aaATACAATTA--TC-----------CAGGTTAAAAGCAAGT--------------GT--------------------A----AAAATAGTGAATTGAACAAAATTAGAATATTTGTACCANNNNNNNNNNAGAATAT-TT-GTACCAGTCTAG------T--TA----A-----T-AAATTTAAGACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------TTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAAT--ATACA-C-AAA-A-G-GGTTATTAAACTGTGTTTATTAAAT----AGAAATCATAAAATTTAAAGCATGTAAGACA----TG-TTTAAAAT-TTCCTGTGTTTGTTGCAT-A-ACGTTCAGG-ATGATAGTCATCAG-AAATACTGTTGCTGACTGGCCT---ATGACGAACGCAAAGTATGGA--AGAAA--C-T---C-T-GATGAGACCAGAA-AAATAAAAT-T-A-TTTTTTCTATA--C-ATTAGTATAAT---AC-GCACACCTGTTTTAGAGCTTAAAA--GCTTG-GG--AAAA----AATT-----GCAGATTATAATCG--TA--TTTattttttttgcaattcaaccaaacaaaaatgtgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaaaaaagttaaattctaaccctggca
gi|17 : caAAACATGTTAGTA-T---TGTCAAG-----TATGGAAGGGAATTTGCGCTCTTT-AATT----GAAGATCA--A-GAGAT--CAATTAGTTTCAATTAGTGCACTTATAATCT-CACAGCAGGAA------AGGACAA---GGGA----G----AGGTGGG-tatactgt
gi|17 : tTGGGTCGGA--GTCAGTTTTGTA-------------A-TTGGCATGCAATTAACAGCC---GC-CAA------A-----CATTGACAAATGCAC---ATAACTT---T--------CTTTTTTG--TCATAG--AGTTT---T------AAATTT-G-TTTATGTAAA-TTTTCAATCCATAAACTGTTGTT--T--T-------------------------TT----T--CA----TAGCTAT-AAAAAAAA-------TC-------------TT----------A--------------------CA---ATATTTACA-TA----TA-TAT-----------ATT-TAATG----ACAA------------------C--------------C--------------AT--------------------A----AAAATAGTGAATTGATCAGGATTTA---A----------------------ATAT-TT-GTACCAGTCTAG------T--TAT---ACACATT-ATATTATAGACTTGCAGT------------G-TAgtgggttagtgttagtggtggaggggggtgtagggggatgggtcggagtcagttttgtaattggcatgcaattaacagccgccaaacattgacaaatgcacataactttcttttttgtcatagagttttaaatttgtttatgtaaattttcaatccataaactgttgtttttttcatagctataaaaaaaatcttacaatatttacatatatatatttaatgacaaccataaaaatagtgaattgatcaggatttaaatatttgtaccagtctagttatacacattatattatagacttgcagtgtatattgttgt
gi|18 : taaacatgttagtattgtcaagtatggaagggaatttgcgctctttaattgaagatcaagagatcaattagtttcaattagtgcacttataatctcacagcaggaaaggacaagggagaggtggggtgggttagtgttagtggtggaggggggtgtagggggaTAAT--T-------------------------ATAACCG--CA----TAATTAT-GAAAAAAATTGAGA--C-------------A-----------A---TTAA-----------A-CA---ATATTTTCA-TG----TA-TACTTCCATATT-TATTCAAATGCAATGCCATTA--TC-----------T--------------T--------------GTTTAATGACAAGTTT------A----AAAATAGTGAATTTAACATTTTTTGAATA-----------------------T-T-TT-GTACCAGTCTAG------TATTA----A-----T-ACATGTTAGACTTCTGGT------------T-TAT---------------AT-TTTATGT-T---------TTT-TTA-----AATGTGGACGTAACAAATTAC------TCAATA-ATAC--T-AAA-A-ATGGCTTATTTACTGTGT-------------GGCAAACATAACATACAAAGCAAATAAGACA----TG-TTTAAAAC-TTCTTGTTCATATTGCAC-T-ACGTTCAAG-GTGAAATTTGACAT-AAA----------GAC-------------CGA----AAAGTTCGAG--AGAAA--C-T---T-TAGACGGGATCTGAA-AAGAAAAATAT-A-TTTTTTCTGTA--C-TTTGATATTAC---CC-ACACCTCTGTTTAAGATTTTAAtattgttgt
gi|19 : cATTTCTATATAACATT-AAACCCCATACAATTA--TCACATTTAATAGCAAG-----------C--------------AT--------------------A----AAAATAGTGAATTGAACATAATTTGAATA-------------------------T-TT-GTACCAGTCTAG------T--TA----A-----TCAAAT-GAAGTCTCGCGGT------------T-TAA---------CTA-AATG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAA---------TAC------ACAATA-ATACA-C-AAA-A-G-GGTTTATAAACTGCATTTATTTGAT----AGAAATCGTAAAATATAAAGCATGTAAGACA----TG-GTTAAAAC-TTCATGTGCTTTTTGCAC-T-TTGTTCAAG-ATGATAGTCATCAG-AAATACTGTTGTCGACTGGCCTTTGTTGACTATCGCAAAGTTTGGG--GGAAG--C-T---C-T-GACGAGACCTGAA-AAATATATT-T-T-TTTTATATATA--C-ATTAGTATAAT---AT-GCACCCCTGTTT
gi|2 : ATTCATCAAAACCCTCAAAGTCATCTGCTT-----------CGATGTCGTTGTCA--------AGCAACGGTAACAGGTTCTCAACCCCTTCTC-ACCCACCAGGTTCTCAACACCTGC-TCAAACATGTCACTT-T---TGCCACT-----TGTCAAACGGTATCTGCACTCTTTTAATT----CAGGATCA--AAGAGATGTCACTTAATTTCAATTAACAGAGTGATAATCC-GACCACAGTAA------AGGACGA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGT------------GCC---CC-TGA------A-----CACC------TGCAC---A--ATTT---T---------TT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-ATTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--AG----TAATTGT-AAAAA-------------------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----T----TTTTTTTATTTCATT-AAACCCCATACAATTA--TC-----------C--------------G--------------GT--------------------t
gi|21 : cagatgatattcaacaggtaggtactaaataaaacattctgttattagattagattatatgattccacaaagttgaaaactcttcaaatttaaaataattgagtgaaatcttataattactgtatttcccaagtataatccgcaggtgattttgaagccaaaaactggtggaaaaaaagctagcgtacgtctattatccacaggcataagttgtttactacatctgccattttgaaatctggaccaaaatgaaagattagttttgatatttttggagtaacaaaatctagactggtgtactgcatgattttgtaaaaaacgtaggtaaaacgttttgatgtgatataaagtgtgctaaagacaataaaatttgcgagtataaaatggtgttactgtaatttatgtgtatgtgtatttgggtaagtgcatcttttgagaaatattttggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattcagcagtctctgatgtctg--ACTTG-GG-------------T-----GCGGTTTATAATTGGCGA--TATACGGTAttaatggcgagtataaaaat
gi|24 : tcctgatgcttcttctaaaatggttataccaaaatagttttttgcaaattgggg--------------GT--------------------G----AAAATAGTGAATT-------ATTTG--------------------------------T-GTACCAGTCAAG------T--TAC---A-----T-AAAC---AGACTTCTGCTTTAAAGATCATGT-TAA---------CAA-ACAG-TTT-TGTCT--------ATTT-T-T-----CATTTGGAATTAATAAAATAC------ACAAAATATAC--TGAAA-A-T-GGTTTATAAACTTTGTTTATTGAAT----AGAAATCATAAAATATAAACCATATAAAACA----TG-TCTAAAACATTCAT-TGC--ATTGC-C-T---GTATACT-GTGAAAGTCCTGGGAAAATGCTataatccgcaggtgattttgaagccgaaactggtcgaaaaaagctagtatccgtctataatccgcaggcatgaatcagctgaaccagctgtttactacatctgccattttgaaatccagaccaaagtgaaagatgaattttgattggcttattatggagtaacaaaatctagactggtgtactgcattactttgtaaaaacataggtaaaacgttttgatgtgatgtatagtgtgttgaaaatttgcgagtaccaaatggtgttaccgaaattatttttatgtttgtgtatttggg
gi|24 : AAAGTCCTGG--GAAAATGC-T---T-CAGACGGGACC-------ATA-----T-A-TATTTTCTGTTGTC-TATAGTTTAAC---CT-GCACCCCTGTTTA--ATCTTAAAA--ACtcagacgggaccatatatattttctgttgtctatagtttaacctgcacccctgtttaatcttaaaaac
gi|25 : gtgaaaatagtgaattatttgtgtaccagtcaagttacataaacagacttctgctttaaagatcatgttaacaaacagttttgtctatttttcatttggaattaataaaatacacaaaatatactgaaaatggtttataaactttgtttattgaatagaaatcataaaatataaaccatataaaacatgtctaaaacattcattgcattgcctgtatactgtg----AAAATAGTCAATTGAACAGAATTTGAATA----------------------TTCT-TTTGTTCCAGTCTAG------T--TA----C-----T-----TG--TACTTTCAGT------------T-TAA---------------AT-TTTATGT-TTTATAAAAGTTTATCCTTATTCATTTTGAAGTTACAAAATAC------ACAAAA-ACAC--T-AAATA-T-GGTTTATAAAC-GTGTTTATT---T----A---ATC------TATAAA-CATATAAGACA-------------AC-TTCCTGTGCATATTGCAT-T-ACAT----GTATGTTCGCAGTGAA-AAATGTTG--------TAGCA------GACGATTGTAAAATTAAGG--GAAAA--CTT---T-T-GACGATACCTGAA-GAAAAAAA----A-----TTCTATA--CTCTTAGT
gi|26 : tCCAGTTTCGG-CTTTAAAATCACCTGCGG--ATTA----TACTTGGGTGCGGTTTATAATGGGAGA--TTTACGGTA
gi|27 : atttaagttagattttataataaagtcactcttgaagcctcgtgaagtgatttttaaactttttttacattgacAATA----------------------ATGCAGT-ACACCAGTCTAGATTTTGT--TACTCCA-----T-AAAT--AA-----CCAAT------------CATAATTG------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----AATTTGGAAGTTACAGAATAC------ACAAAA-ATATA-C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAGTATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTCAAG-tcgaaaaaagctaatatccgttcataatctgcaggcatgaatcagatgaatcagttgttaactacatctgccattttgacatccggaccaaagtgaaagatgaattttgattggctaattatggagtaacaaattt
gi|29 : ctcgcaaattttattgtctctaacacactatatatcacatcaaaactttttacctactttttttacgaATGTGAAAACAGCAAAATATGTGAAAACAGTA-A-------AAA-A-T-GGTTTA---ACAGTGTT-GTTAATTTTTTAGTTATCGTAAA-TATAAAACCTATAAGGCA----TG-TTTAAAAC-ATCCT-T-CATATT---C-T-TCATTTACG-GTAAAAATCGCCAG-AAATGCTGTTGT
gi|3 : tgtcttttttgttttggaagtagcaaaatGGAAGTTTTATTTTAATTTCAAATGCTATATTATATTTTGTTTA------------CATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-ATCAAAACCCTCATAACCATCTCCTTTGTTATCACTGC-----------CG--------AGCAACTATAACACGTTCTAAACCCCTTTTC-ACCAACGAGGTTCTGAACACCTAC-TCATTGGTGTCACTA-T---AGACACT-----TGTCAAACAGTATTTGTGCTTTTT-AATT----CAAGATCA--AAGAGATGCCAATTA----------ACAG--TGATATTCC-GACGGCAGTAA------AGGACAA---AGAA----GGTACAAGTGGG-CGGA--GTCA-------A-------------A-TAAGC------------GTT---GC-CGA------A-----CACA------TGCAC---A--ATTT---T--------GTT----C--TTCCGA--AGTTC---T------AAATTT-GTTTTGTGT-CA-TTTTTAATCAATAAACCGGTAATAAC--T-------------------------TT----T--CA----TAATTGT-AAAAAAAA--GCAATAC-------------AT----------AATTGTAA----------AA--A---ATAGT--AA-TA----TA-TATTACATTAT--CATT-AAA----AGGCGAGT----------------------------------------------GT--------------------A----AAAACAGCAAATTTAACAGAATTTGAATA-------------------------T-TT-GCACCAGTCTAG------T--GA----A-----T-AAATAGAAGACTTCCGGT------------T-TAG---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTCAGACA----TG-TTTAAAAC-TTCATGTGCTTTTTGCAA-T-ACGTTCAAG-ATGATAGGCATCAG-AAATACTGTTCTTGACTGGCCTTTGTTGAGGATCACAGTGTTAGTA--GGAAA--C-T---C-T-GATGAAACCTGAA-AAATAGAAT-T-ATTTTTTTCTATA--C-CTTAGTATAAT---AC-AGACCCCAGTTTTAGACTTTTAAA--ACTTG-GG--AAAA----AACT-----GCCGATAATAATCATAGA--TTAACGGTAagtcgagcattaacttctgacggaacaaaatatatttttctgtactcctacctctttttttaataccttaaaact
gi|30 : ----AGAAATCATAAAATATAAAGCATGTGAGAAA----TG-TTTAAAAC-TTCCTGTGCTTTTTGCAC-T-ACGTTCAAG-ATTATAGTCATCAG-AAATACTGTTGCCGAATGGCCTTTGTTGATGATCACAAAGTTTTGG--GGAAA--C-C---C-T-GACAAGACATGAA-AAAAAAAAA-A-A-AAAATTCTATA--C-ATTAGTACAAC---AC-GCACCC--GTTTTAGACCTTAAAA--TCTTG-GA--AAAA----AACT-----GCAGATTATAATC--CTATTTTTATGGTAa
gi|31 : CAGAATTTGAATA-------------------------T-TT-GCAACAGTCTAG------T--TA----G-----T-AAATAGAAGACTTCCGGT------------G-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTCT----CATTTGGAAGTTACAGATTAT------ACAATA-ATAC--C-AAA-AAG-GGTTTATCAGCTGTGTTTATTAAAT----AGGAATCATTAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTC-----TGATAGTCATCAG-AAATACTGTTGTCCACTGGCCTTTGTTGAta
gi|33 : AATATAAAGCAAGTAAGACA----TGTTTTAAAAT-TTCC-GTGCTAATTGCAG-T-ACGTTCAAG-ATCACAATCGTCAG-AAATGCTGCTTTTGACC-GCCATTGTTGAC-ATCG-ATAGTTTGGG--GGAAA--CTT---C-C-GACTCTACCTGAA-AAATATAAT-T-A-TTTTTTCTATA--C-TGTAGTAT---------GCACCCCTGTTTAAGACCTTAAAA--ACTTT-GG--A
gi|35 : C-GACAGCAGCAA------AGGACGA---GGAA----AGTACAAGTGGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---G--ATTT---T--------CTT----G--TTCCAA--ATTTT---T------AAATTC-GTTTTGTTT-TA-TTTCTAATCAATAAACTGATAACAAT--T-------------------------AT----A--CA----TAATTGT-AAAAAAAAT-GAAATTCATAATTGTAAAAAAT----------A---GTAA----------TATCA---ATA-TTTCA-TA----TA-TAtttttttttaattgcagttcaacaaaacaaaaat
gi|36 : GGGAATTCTATTTTCATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCATCTCGTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCACTTCTC-ACCAACGAGGTTCT
gi|37 : GAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAA-CCCTCAAAATCATCTCCTT-----------C-----------CA--------AGCAACAACAGCACGTTCTAAACCCTTTCTC-ACCAACGA
gi|38 : TATTAAATT-AAACAC-ATACAATTACCTC-----------C--------------CTTCAAATGAAAAGTAT--------------------A----AAAATAGTGAATTGAACATAATTTGAATA-------------------------T-TT-ATACCAGTTTAG------C--TAT---A-----T-TAATAGTA---TTCCAGT------------T-TAAAATTTATGTTGACAAAGATGT-TGT-C---------TTT-TCA-----CATTTAGAACCAACACAATAC------ACAA-----------AAA-T-T-GGTTTAAAAACT
gi|39 : TGATAATCT-GGCACCAGGAA------AGGATAATGTGGCA----GACTCAATTTGG---AA--ATTAGC-----A-------------A-TTTACT-----------GCTTTTGCATGATG----A-----CACT------TGTGC---A--TTTTAAAT--------TTT----GGTTGTCAAGGATTTT---T------AAATTTTGTTTTGTTT-TA-TTTTTAATCCATAAATTGAT-----T--T-------------------------AC----TAGCAATGGTAATTAT-AAAAt
gi|4 : GTTTCCAACACCTAC-TCAAACATGTCACT-------------------------CAGTATTCGCACTCTTT-AAAT----GAAGATCA--AAGAGATGTTGATTAGTTTCAATTAACAGTGTTATAATCG-GACAGCAGGAA------AGGACCA---GGAA----AGGACAA-TGGG----A--GTCA-------ATTTTGTAAATGAAA-TTTACT-----------GCC---GC-CGA------AAATGACACCGTCC--TGTAC---A--ACACA--T--------CTT----T--T---AA--ATTTTGGTTGGCCAAAAATTT---TTTA-AT-TAGTTTTTCATCCATACATTAAT--TAACCGT-------------------------AT----T--CA----TAATTAT-AGAAAATAT---AATTA-------------AG----------A----CAA----------TGCAA---GTGTTTCCA-TAATTATA-TGTTTCCATATTAAATT-GATCACCATACACTTG--CG-----------CTGTTTAATGACAAGC--------------GT--------------------A----AAAATAGTGAATTGAACAGAATTTGAAT-----------------------ATAT-AT-ATACAAGTCTAG------T--TT----A-----T-AAAT---AGACTTCTGGT------------T-TAc
gi|4 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatATTTGGAAGTAATAAAATAC------AAAAAA-ATAC--T-AAA-A-ACAGTTTATAAACTtactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatatttggaagtaataaaatacaaaaaaatactaaaaacagtttataaacttggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|40 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatgtttccaacacctactcaaacatgtcactcagtattcgcactctttaaatgaagatcaaagagatgttgattagtttcaattaacagtgttataatcggacagcaggaaaggaccaggaaaggacaatgggagtcaattttgtaaatgaaatttactgccgccgaaaatgacaccgtcctgtacaacacatcttttaaattttggttggccaaaaattttttaattagtttttcatccatacattaattaaccgtattcataattatagaaaatataattaagacaatgcaagtgtttccataattatatgtttccatattaaattgatcaccatacacttgcgctgtttaatgacaagcgtaaaaatagtgaattgaacagaatttgaatatatatatacaagtctagtttataaatagacttctggtttatactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatTTGTAAAAGATTAAAATGTTTGGGAGGGAAA--A-TGTCC-T-GACTA--CCTGAACAAATAAAAT-CCA-TTTTGTCCATA--C-TCTAGTTTAACCTAACTGTAACCCT--TTAGGAC--TAAAA--ACTTA-AA--AAAAGAAAAACT-----GCCGGTTATAtggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|42 : taccggaaatgctgGTTGATGACTGAAAAGTTTGGG--AGAAA--C-T---TAC-AACGA------------TAAAATAT-A-TTTTTCCTATA--A-TCTGATATTGC---CC-GCACCCTTGTTTGAGACCTTAAAAT-GTCTG-GGGCAAAA----AAC------ATGGGTTATAGTCTGCAG--ATTAGGGT
gi|43 : A---ATATTTAAAATA----TA-GATGTCCATATCGGATT-AAGTACTATAAAATCA--TC-----------C--------------T--------------TTTTAATGACA-----------AGTTTAAAATAGTGAATTGAACAGAATTTGAATA----------------------AACT-TT-GTTTCAGTtacagatg
gi|44 : aaaagaggacaataattacaaaa--------------C--------------GT--------------------A----AAAATAATAAATTTAACAGAATTTGAATA-------------------------T-TT-GCACCAGTCTAG------T--GA----A-----T-AAATAGAAGACTTCCGGT------------T-TAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTAAAAGTTACAGAATAC------ACAATag
gi|45 : gagGATCAGAATTTGAATA-------------------------T-TT-GTACCAGTCTAG------T--AA----A-----T-AAATTGAAGACTTCCAGT------------T-CAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACTATA-ATACA-C-AAA-A-C-GGTTTATAAAta
gi|47 : TTCTCAACATCTAC-TCAAACGTGTCACAA-T---TGCCACT-----TGTCAGATGGTATTCACACTCTTT-AATT----C---------AAGAGATGTCAATTA--TTAAAT-------GTGATAATCG-GAC
gi|5 : CCTCTTCTT---CGACA--GTTCTCATTGCCTAC-TCAAACATATCACTA-TATTTGTCCCT-----TATCAAACGGTATTCACACTCTGT-AATT----GAAGATGATGAAGAGATGTCGGTTAGTTTCAATTAACAGAATGATAATCT-GACAGCAGGAA------ATGACTA---GAAA----AGTACCAGTGGG-CGGA--GTCA-------ATTTTGTA------A-TTGGCTTGCAATTTACTGCC---AC-AAA------A-----CATC------TGCCC---A--ATTT---T--------GTT----G--TCCCAG--ATCTT---T------AAATTT-GTTCTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--TATTCATAATTATAAAAAAATTGTAAAT----T--CA----TAATTGT-AAAAAATAT-TAA-TTA-------------AG----------A----CAA----------TATAA---ATATTTTCAATA----TA-TATTTCTTTATTACATT-AAACACTATATAATTG--TC-----------T--------------C--------------ATTTAATGACGAGCAA------A----AAAATAGTGAATTGAACAGAATTTGAATA-------------------------T-TT-GCACCAGTCTAG------T--TA----A-----T-A----GCAGATTTCTGGT------------T-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC------ATTTGGAAGTAACAGAATGC------ACAATA-ATAC--C-AAAGA-GTGGTTTATAAACTATGTTTATTAAAT----AGAAATCATAAAATATAAAATATGTAAGACA----TT-TTTATAAT-TTCCTGTGCTTATTGCAC-T-TTGTACAAG-ATGGTAACCGTCAG-AAATGCTG--------------TTGTTGATGATCGCAAAGTTTGGG--AGAAA--C-T---C-A-GGCAAGACCTGAA-AAATATAAT-T-A-ATTTTTCTATA--C-ACTAGTATGAT---AG-GTACCCCAGTTTTA
gi|53 : cacgtcGGTTCTGAACACCTAC-ATACAAGTGTCACTA-T---TGA-ACT-----GGACAAATGGTATTCGCGCTTTTT-AATT----CAAGag
gi|54 : A-TATTTCCATATTAAATT-AAATACCATACAATTA--TC-----------C--------------T--------------GT--------------------
gi|55 : GGAATTTGCTATCTTT-AATT----GAAGATCA--AAGAGATGCCAGTTAGTTttgatgaca
gi|57 : agGGAAATTTTATTTTAATTTCAAATGCTATAT-ATA
gi|6 : CCACT--------CAA---GTATTTATGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTTAATTAACAGGGTGATAATCC-AACAGCAGTAACTGTTAAGGACAA---AGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------ATT---GC-CGA------A-----CACC------TGCAC---A--GTTT---T--------GTT----G--TCCCAA--AGTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATGAT--T-------------------------AT----T--CA----TAATTGT-TAAAACAAT-GAAATTC-------------ATAATTGTTAAAA---GTAG----------TATTAGCTATATTTTCA-TA----TA-TAATTCTTTATTACATT-AAACACCATACAATTA--TC-----------CTGTTTAATGGCGAGC--------------GT--------------------G----AAAATAGTAAATTTATCAGAATTTA---A----------------------ATAT-TT-GCACCAGTCTAG------T--GA----A-----T-AAATAGAAGACTTCGGGT------------T-TAG---------CGA-AAAG-TGT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-GTAC--C-AAA-AGG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----CG-TTTATAAC-TTTGTGTGCTTTTCGCAC-T-ATGTTCAAG-ATGATA--------------CTGTTCTCGACTGGATTTTGTTGGCGATCCCGAAGTTTGGG--GGAAA--C-T---C-C-GATAAGACCTGAA-AAA-AAAA----A-TTTTT--TATA--C-CTTAGTATAAT---AC-GCACCCCTGTTTTGGACCTTAAAA--ACTTG-GG---GAA----AACT-----ACGGATTATAATCATATT--TTTACGGTAc
gi|7 : caaacCATCAACACTCTCAAAGTCATCTCCTT-----------C-----------
gi|8 : gcatgtaatttatgcacaaatggtttaacacacaggcactggtcacaatttttttttttagtatatttggtcatatagtatctatatagtagactggtcacaaactctttttttagtatattaaaattatggtcatgtagtaccgtattttcccaattataatctttactcaagtataatccgctggtgattttgaaagcaaaactggtgggaaaaagatagtatacatctattatctgcaggcatgaatcaattgtttacctcatccgccattttgaaattcagaccaaagtgaaagaagaatttggattggttcttcatggcgtaacaaaatcaatactggtgtactgcataattttgtaaaaaaacgtaggtgaaatgttttgatgtgatatatagtgtgttggagacaataaaatttgtgaatataaaatggtgttaccataattacttttatgtgtatttgggtaagaaaaagtgaaaataaaaacaaactattgacaatttttttaaatgcatctttcgagaaatatttggaccatcaccctttcactgtaattgcatcattcagcagtctctaatgtccgatgAATGATAACAAGTTCTAAACACCTTCTC-Aaatgacgctgtcc
gi|8 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttAAGTTCTAAACACCTTC-TCAAACGTGACACAA-T---TGTCAAG-----CACCAATTGGTATTC-TACTCTTT-AATT----GAAGATAA--AATAGAT---AATAAGTTTCAATTAACAGCGTG----TCCTG-----AGGAA------AGGACAA---GGAGGCTTAGT-CAATTTTG-T-AATTGTCATGG----A-------------ACTTCTT------------GTC---GC-CAAACAATGA-----CACC------TGTACATAA--ACTT---TAAATTATGTTT----G--TCTT-A--GTCTT---T------AAACTT-GTTTTGAG---A-TTTTTAATCCTTAAACTCAT-----T--T-------------------------AT----T--CA----TATTTATATATAAAAA---AAATCC-------------------------A---ACAA----------TACAA---ATATTTCCA-T--------------TTTA----ATT-AAACACCATACACTGA--TC-----------CCATTTAATGATAAAC--------------GT--------------------A----AAAATAGACAAATGAACAGAATTTGAATA----------------------aacgtgacacaattgtcaagcaccaattggtattctactctttaattgaagataaaatagataataagtttcaattaacagcgtgtcctgaggaaaggacaaggaggcttagtcaattttgtaattgtcatggaacttcttgtcgccaaacaatgacacctgtacataaactttaaattatgtttgtcttagtctttaaacttgttttgagatttttaatccttaaactcatttattcatatttatatataaaaaaaatccaacaatacaaatatttccattttaattaaacaccatacactgatcccatttaatgataaacgtaaaaatagacaaatgaacagaatttgaatatgtgta
gi|9 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttaatgataacACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------GATGTTGCTGAGCAACAAGAATACATTCTAAACCCCTTCTC-ACCGGCAAGGTTCTCAACATCTAC-TCAAACGCGTCACTA-C---TGCCACC-----TGTCAAACGGTACTCCCACTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGAAAAACT-GACATCAGTA------------AA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------GCC---AC-TGA------A-----CACC------TGCAT---C--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TT-TTTTTAATCAATAAACAGAAAATAAT--T-------------------------AT----T--TA----TAACTGT--AAAAAAAT-GAAATTC-------------AT----------A---ATtgtgta
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATTTACCTTTATGTATATTCATTAAATTTTGATACTGCTTTACCTATTTTTGTCAGAGTTGAACTTAATACAGTATATCTCCAGTTATATTCCGCACTGGAGTATAATCTGCAGGTTATTTTGAAGCCAAAACTAGTGGAAAAAAGCAAGTATACGTTTATTATCCGTAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGACAAAAGTGAAAGATGAATTTTGATTGGTTATTTATTGAGTAACAAAATCTAGACTGGTGTACCGCTTAATTTTGTAAAAAACTTCGGTAAAACATTTTGATGTGATATATAGTGTGTTAGTGACATAAAACTTGCGACTATAAAATGGTGTTATTGAAATATCTTTATGTGTATTTGG
Unaligned ( gi|22 ): TGACCCTAATTTTACTCTATTTCCAAAGTATAATCCGCACTTGAGTATAATCCGCAGGTGATTTTGAAGTGAAAACTAGTGGAAAATTGCTAGTATACATCTATTATCTGCAGGCATGATTCAGTTGTTTACTACTTCTGCAATTTTGAAATCCTTACCAAAGTGAAAGATCAATTTTGATTGGTTATTCATGGAGTAACACAATCTAGACTGGTGTGCTGCATGATTTTGTCAAAAACGTAGGTAAAATATTTTGATGTGATATATATAGAGTGTACTTCAAAATCCCTATGGCTCAAAAATGACATGGTACTCAAAATCCCCTTGATGGGTGGCAT
Unaligned ( gi|23 ): AATCTCCAAGTATAAACCACACCCAAGTATAATCTGCAGGTGATTTTGAAGCCAAAACTGGTCGAAAAAAGCTAGTATCTGTCCATAATCCGCAGGCATGAATCAGATGAATCAGCTGTTTACCACATCCATCATTTTGAAATCCCAACCAAAGTGAAAGATGAATTTTGATTGGCTAATTATTGAGTAACGAAATCGAGACTGGTGTACTGCATAACTTTGTAAAAACGTAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGGAGACAATAAAACTTGCAAGTATAAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGG
Unaligned ( gi|28 ): ATTTATGTTTATTTATAGGTTATTTATTCCTGGTCATATTTTTTTTGTTTTTAAAGGGAATATACCATAAATCTCCTATTATAAACCGCACTCAAGTATAATCCGCAGGTGATTTTGAAATCGAAACTGGTCGAAAAAAGCTTGTATACGTCTATAATCCGCAGGCATGAATCAGATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGATCAAAGTGAAAGATAATTTTTGATTGGCTAATTATTGAGTAACAAAATCTAGACT
Unaligned ( gi|32 ): ACTACCGTAATCGTTTGATTATACCCCTTTGCCAAGTATAACCTGCAGGCTAATTTTGAAGCCAAAACTTGTGAAAAAAAAACTTATATCCATGAATAATACGCAGTTGTTTACTACTGCCGCCATTTTGAAATCGAAAGACAAATTTTGATTGGCTAGATTTTAAGTCACATAATCTAGACTGGCATACTGTTAATTTTGTAAAATCACATGTGATAACTACTATTAAATATTTTGTGTAA
Unaligned ( gi|34 ): TTTTAATTTAGACTTTATGTCATACTTTTGACAAATAACCACAGACCCTGGACTTTTGATTTTAACATACAGTAATCTTCCAATTATAACATGCCACCAAGTATACCCCGCATGCTGATTTTGAAGACAAAATTGGTGGAAAAAAGTAAATATATATCAATTATACACAGCCATTATATCTTCAAATCCAAATCTGTTCGCCATTTTGA
Unaligned ( gi|41 ): CTTTGATCTCTCGAATAAAAGTCTCCTCAGAGTATCACAGACTGATTTTGTATCCAAATCTGGTGGAAACATAGCTCTTGTATCCTGGCATATCACACAGCATGAAATTGAGAGTTTACCATGGCCACCATTTTAAAATCAATACAAAAG
Unaligned ( gi|46 ): CACGGTGAAATTCACCAGAAATGCTATGGTTGATGATCGAAAAGTTCGGAAGAAATGATGTCGGGATCTGAATAGTTAGATATATTTTTGATATTCTAATGATACCTTAAAAAATTTAAGAAAA
Unaligned ( gi|48 ): ATGCAATTCAGTCTTTATTCATGTTCAATTAGTTATATAAAAAAAATTAGATATGCGTACACTCAACTAGTATTTACTGTTGATTGTTACTACCAT
Unaligned ( gi|49 ): GACTATTGCTTATTTTTTTATAAAAATATACCGTAATATTGCAAATATAAGACACCCCAAAGTATCACCTGCAGGCTGATTTTGAGGCAAAGATAA
Unaligned ( gi|50 ): ACTATTGGATAAAATATAGGTAAAACATTTTGATGTGATATATAGTATGTTAGAGACAATAAAACTTGCGAGTATAAAATGGTGTTACCGA
Unaligned ( gi|51 ): GCAGTTCAGCAAAACAAATGCGAGTTGAAAATATTTGCATAGGTTAAAAAAAGCCAGTGGATTAAAAAGTTAAAATTCTACCCCTG
Unaligned ( gi|52 ): ACTACAGTATTTCGCAAATTATAATCTGCACTCGAGTACAATCTGCAGGTGCTTTTGGAGCCAAAACTATTGGATAAAAT
Unaligned ( gi|56 ): AAATCCCCATGGCTCAAAAATGACAAAGTAGTCAAAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 555555555555555555555555555555555555555555555555555555555 1 666666666666666666666666666666666 4444444444444444444444444444444444444444 111111 111111 1111111111111 2222222222222222222222222 333333333333333333333333333333 11111111111 222222222222222222222222222222222222222222222222222222222222222 11111111111111111 1 1111 111111111111 1111111111 111111111 1111 222 111111111 11111 1111111
lowQualScore : 8 3 888 777777777777777777777777777777777777777777777777777777777 0 999999999999999999999999999999999 4 8 1 3 3 555 1 77777 0 0 2 6666 44 1 3 5 1 888888 555 6666 777 44 0000000000000000000000000000000000000000 555 3 333333 77777 555555 555555 6666666666666 6666 44 0 44 555 888888 3 3 3 2 33 6666666666666666666666666 5555 33 5555 555 888 666666666666666666666666666666 66666666666 55 555 6 6666 2 2 999 2 0 33 777777777777777777777777777777777777777777777777777777777777777 5555 77777777 44444444444444444 44 4 333 7 666666 22 2222 2 8 1 2 111111111111 2 6666666666 2 4 4 2 111111111 2 0 88888 1 666666 2 2222 4 000 0 5555 5555 2 2 2 1 2 2 2 2 0 0 1 2 1 888 66 4 0 6 33 33 666666666 1 3 2 2 7 2 2 55555 5555 2 4444 444 2 1 66 3 44 7777 00000 1 9999999
lowQualScore : . . ... ......................................................... . ................................. . . . . . ... . ..... . . . .... .. . . . . ...... ... .... ... .. ........................................ ... . ...... ..... ...... ...... ............. .... .. . .. ... ...... . . . . .. ......................... .... .. .... ... ... .............................. ........... .. ... . .... . . ... . . .. ............................................................... .... ........ ................. .. . ... . ...... .. .... . . . . ............ . .......... . . . . ......... . . ..... . ...... . .... . ... . .... .... . . . . . . . . . . . . . ... .. . . . .. .. ......... . . . . . . . ..... .... . .... ... . . .. . .. .... ..... . .......
lowQualScore : 0 2 222 000000000000000000000000000000000000000000000000000000000 0 111111111111111111111111111111111 0 2 9 6 3 888 4 77777 6 9 9 1111 22 8 5 7 0 888888 444 5555 000 22 3333333333333333333333333333333333333333 444 1 111111 77777 444444 555555 5555555555555 5555 22 2 22 444 888888 1 1 1 6 77 7777777777777777777777777 7777 77 7777 000 888 444444444444444444444444444444 00000000000 44 444 2 5555 9 0 666 7 5 44 666666666666666666666666666666666666666666666666666666666666666 0000 22222222 00000000000000000 88 0 777 9 111111 99 9999 2 4 9 2 444444444444 2 1111111111 4 7 7 4 222222222 4 1 22222 7 111111 2 3333 4 555 3 3333 0000 4 4 2 0 4 4 1 2 3 2 9 4 4 777 55 1 9 6 22 22 444444444 6 6 4 4 1 4 4 99999 0000 4 1111 777 7 0 88 1 22 1111 00000 0 2222222
consensus : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATCGNATA--TTTACGGTA
Reference ( family-188 ) : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATCGGNTA--TTTACGGTA
gi|1 : GGAAATTTTATTTTAATTTCAAATG----AT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCGTCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCAACGAGGTTCTAAACACCTACATC-CACGTGTCACTA-T---TGACACT-----TGTCAAACGGTATTCGCGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTACTTTCAATTAACAGAGTGATAATCC-GACAGCAGTAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GT-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCGA--ATTTT---T------TAATTT-GTTTGGTAA-TA-TTCTTAATCAATCAACTGATAATAAT--T-------------------------AT----T--CA----TCAGTGT-T-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACCCCATACAATTA--TC-----------C--------------T--------------GT--------------------A----AAAATAGTGAATTGAACAGATG--------TTG-----------------AATA-ATAT---TTGTACCAGTCTAG------T--TA----AT-AAATTGATG-ACTTCCGGT------------T-TAG---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATACATC--AA-A-G-GGTTTGTAAACTACGTTTATTTAAT----ATAAATAATAAAATATAAAGCATGTTAGACA----TG-TTTAAAAC-TTTGTGTGCTTTTTGCAC-T-ACGTTCAGG-ATGATAGGCATCAG-AAATACTGTTCTCGACTGGCCTTTGTTGACGATCGCAAAGTTAGCG--GGAAA--C-T---G-G-GATGAAACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AA-CA-TACTATAAA---CC-GCACCCCTGTTTCAGACCTTAAAA--AACTG-GG--AAAA----AACT-----GCGGTTTTTAATTGGTTA--TTTACGGTA
gi|10 : AA----------AATGA---ATTTTATCC-TA----TAATA---CTTTAT-------AAACACCATACAGTTA--TC-----------C--------------C--------------GTTTACCGGTAATGACAAGCGTA----AAAATAATAAATGGAACAGAAT--------TCA-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TAT---AA-AAATAGAAG-ACTTCCGGT------------T-TAA----------GA-GAAG--TT-TGT-T--------TTTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAAC-TTTACATGCTTAATGCAC-T-AGGTTCAAG-ATCACAGTCGTTAG-AAATGTTGCTTT-GACC-GCCATTGTTGAC-ATCG-ATAGTTTGGA--GGAAA--CTT---C-C-GAC--TACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-TC-TC-TAGTATAAC---AC-GCATTCTTGTTTAAGATCTTAAAA--ACTTA-GG--AAAA----AA
gi|11 : atgtgtaaaaaccagaaTAATTAATAA--CAAAAATAAT--T-------------------------GT----T--CA----TAATTGT-A-AAAAAA-T-GAAATTC-------------AT----------AATTGTAAAAAATAGTTATATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACATCATACAATTA--TC-----------C--------------C--------------GTTTAATGGCGAGCGT------A----AAAATATTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCGCCAGTCAAG------T--TA----AT-AAGTAGAAG-ACTTCTGGT------------T-TAA---------CAA-AAAG-TTT-TAT-T--------GT--------------------GTTGCAGAATAC------ACAATT-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACATGTTTG-TTTAAAAC-TTTGTGTGCTTTTTGCGCGTAACGTTCAAG-ATGATAGTAATCAG-AAATACTGTTGTTGACTGGCCTTTGTTGATGATCGCAAATTTTGGG--GGAAA--C-T-------GATGAGACCTGAA-AAATAATTT-T-T-TTTT-----ATCT----AT-AC-AT-TAGTATAAT---AC-GCACCCCTGTTTTCGACCTTAAAA--A-TTG-GG--AAAA----AACT-----GCGGCTTATAATC--ATAGTTTTATGGTAaatttttgtagttcaaccaaacaaaaatgcgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaagttaaattctacccctgt
gi|12 : ACTCATCAAAATC-TCAAAATCATCTCCTTAGATGTCGCTGT-----------CA--------AGCAACAATAACACGTTTTCAACCCCTTCTCGACC-ACCAAGTTCTCAACACCTAT-TCAAAGGTGTCACTG-T---TACCACTGCCACTATCACATGGTATTCCCACTCTTT-AATTCTGACAGCAGCA--AAG-GATG
gi|12 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctTAATTCTGACAGCAGCAA------AGGATGA---GAAA----AGTACAAGTTGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CCA------A-----CACC------TGCAC---A--ATTT---T--------CAT----G--TCCCAA--ATTTT---T------TAATTC-GTTTTGTGT-TA-TTTTTAATCAAGTAACTGATAATAAT--T-------------------------AT----T--CA----TAATagaaaagtacaagttggcggagttaaattggcgccgcccaacacctgcacaattttcatgtcccaaattttttaattcgttttgtgttatttttaatcaagtaactgataataattattcataat
gi|13 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactcttACTCATTAAACCTCTCAAAGTCATCTTCTT-----------
gi|14 : ccgcaggtaaagttgaagccaaaactggtcgaagaaagctattgaacatctattatccgcaggcatgaatcagttgtttactacatccgccattttgaaatccgaaccaaagtgaagtattttgattggctaattatggagtaacgaaatcaagactagtgaactgcataactttgtaaaaacgtaggtaaaaagttttgacgtgatatatagcatgttagaaacaataaaatttgcaagtataatgtggtgttactattttttatgtgtatttgggtaagacaaaagggaaaatacaaacaaactattgacaatttttttatgtccattttgtgcagaacatttgggtcctaaagaggaccatcaccctctcactgtatctgcatcattcagctgtctctgatgtcagACTCATCAAAACTCTTTAAGTCATTTCCTT-----------CAATGT------CC--------AGCAACAATAACATATTCTCACCTCCTTCTC-ACCCACCAGGTTCTCAACACTTAC-CCAAACGTGTCACTATT---TGCCACT-----TGTCAAACAGTATTCGCACTCTTT-AATT----CAAGATCA--AGGAGATGTCAA-TAGTTTCAACTAACAGAGTGGTAATCC-GACTGTAGCAA------AGGACAA---GGAA----AGTACAAGTGGG-C--A--GTCA-------A-------------A-TTTGT------------GCT---GC-CAA------A-----CA------------------------------------------------CAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TGTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGTAA-AAAAAAAT-GAAATTC-------------AT----------A---ATtgacatcgctgtcgaacagatgccgaaactgttcgtca
gi|15 : aagataaaagggaaaattaaaacaaactattgacaattttttaagtgcatctcaatagaaatatttgggtcctaaaaaggggcaatcaccctctcaatgtatctgcatcattcagcagtctctgatgtccgAATGGAACAAAAT--------TGG-----------------AAT--AT-T---T-GCACCAATCTAG------T--TAT---AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-GAAGTTTT-TGT-T---------TTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGATTATAAACTGTGTTTATTAAAT----AAAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAGC-TTTTTGTGCTTATTGCTC-T-ATGTTCA---------------AG-AAATGCTGCTTTTGAC-AGCTGTTGTTGAC-ATCG-ATAATTTGGG--GGGAA--CTT---C-T-GAC--TACCTTAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TC-TAGTATAAC---AC-GCATCTCTGTTTAAGACCTTAAAA--ACTTA-GG--AAAA----AA
gi|16 : aaATACAATTA--TC-----------CAGGTTAAAAGCAAGT--------------GT--------------------A----AAAATAGTGAATTGAACAAAATTAGAATATTTGTACCANNNNNNNNNNAGAAT--AT-T---T-GTACCAGTCTAG------T--TA----AT-AAATTTAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------TTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAAT--ATACA-C-AAA-A-G-GGTTATTAAACTGTGTTTATTAAAT----AGAAATCATAAAATTTAAAGCATGTAAGACA----TG-TTTAAAAT-TTCCTGTGTTTGTTGCAT-A-ACGTTCAGG-ATGATAGTCATCAG-AAATACTGTTGCTGACTGGCCT---ATGACGAACGCAAAGTATGGA--AGAAA--C-T---C-T-GATGAGACCAGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-AT-TAGTATAAT---AC-GCACACCTGTTTTAGAGCTTAAAA--GCTTG-GG--AAAA----AATT-----GCAGATTATAATCG--TA--TTTattttttttgcaattcaaccaaacaaaaatgtgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaaaaaagttaaattctaaccctggca
gi|17 : caAAACATGTTAGTA-T---TGTCAAG-----TATGGAAGGGAATTTGCGCTCTTT-AATT----GAAGATCA--A-GAGAT--CAATTAGTTTCAATTAGTGCACTTATAATCT-CACAGCAGGAA------AGGACAA---GGGA----G----AGGTGGG-tatactgt
gi|17 : tTGGGTCGGA--GTCAGTTTTGTA-------------A-TTGGCATGCAATTAACAGCC---GC-CAA------A-----CATTGACAAATGCAC---ATAACTT---T--------CTTTTTTG--TCATAG--AGTTT---T------AAATTT-G-TTTATGTAAA-TTTTCAATCCATAAACTGTTGTT--T--T-------------------------TT----T--CA----TAGCTAT-A-AAAAAAA-------TC-------------TT----------A--------------------CA---ATATTTACA-TA----TA-TAT-----------ATT-TAATG----ACAA------------------C--------------C--------------AT--------------------A----AAAATAGTGAATTGATCAGGAT--------TTA-----------------AAT--A--T---TTGTACCAGTCTAG------T--TA----gtgggttagtgttagtggtggaggggggtgtagggggatgggtcggagtcagttttgtaattggcatgcaattaacagccgccaaacattgacaaatgcacataactttcttttttgtcatagagttttaaatttgtttatgtaaattttcaatccataaactgttgtttttttcatagctataaaaaaaatcttacaatatttacatatatatatttaatgacaaccataaaaatagtgaattgatcaggatttaaatatttgtaccagtctagttatacacattatattatagacttgcagtgtatattgttgt
gi|18 : taaacatgttagtattgtcaagtatggaagggaatttgcgctctttaattgaagatcaagagatcaattagtttcaattagtgcacttataatctcacagcaggaaaggacaagggagaggtggggtgggttagtgttagtggtggaggggggtgtagggggaTAAT--T-------------------------ATAACCG--CA----TAATTAT-G-AAAAAAATTGAGA--C-------------A-----------A---TTAA-----------A-CA---ATATTTTCA-TG----TA-TACTTCCATATT-TATTCAAATGCAATGCCATTA--TC-----------T--------------T--------------GTTTAATGACAAGTTT------A----AAAATAGTGAATTTAACATTTT--------TTG-----------------AAT--AT-T---TTGTACCAGTCTAG------TATTA----AT-ACATGTTAG-ACTTCTGGT------------T-TAT---------------AT-TTTATGT-T---------TTT-TTA-----AATGTGGACGTAACAAATTAC------TCAATA-ATAC--T-AAA-A-ATGGCTTATTTACTGTGT-------------GGCAAACATAACATACAAAGCAAATAAGACA----TG-TTTAAAAC-TTCTTGTTCATATTGCAC-T-ACGTTCAAG-GTGAAATTTGACAT-AAA----------GAC-------------CGA----AAAGTTCGAG--AGAAA--C-T---T-TAGACGGGATCTGAA-AAGAAAAATAT-A-TTTT-----TTCT----GT-AC-TT-TGATATTAC---CC-ACACCTCTGTTTAAGATTTTAAtacacattatattatagacttgcagtgtatattgttgt
gi|19 : cATTTCTATATAACATT-AAACCCCATACAATTA--TCACATTTAATAGCAAG-----------C--------------AT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--TA----ATCAAAT-GAAG-TCTCGCGGT------------T-TAA---------CTA-AATG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAA---------TAC------ACAATA-ATACA-C-AAA-A-G-GGTTTATAAACTGCATTTATTTGAT----AGAAATCGTAAAATATAAAGCATGTAAGACA----TG-GTTAAAAC-TTCATGTGCTTTTTGCAC-T-TTGTTCAAG-ATGATAGTCATCAG-AAATACTGTTGTCGACTGGCCTTTGTTGACTATCGCAAAGTTTGGG--GGAAG--C-T---C-T-GACGAGACCTGAA-AAATATATT-T-T-TTTT-----ATAT----AT-AC-AT-TAGTATAAT---AT-GCACCCCTGTTT
gi|2 : ATTCATCAAAACCCTCAAAGTCATCTGCTT-----------CGATGTCGTTGTCA--------AGCAACGGTAACAGGTTCTCAACCCCTTCTC-ACCCACCAGGTTCTCAACACCTGC-TCAAACATGTCACTT-T---TGCCACT-----TGTCAAACGGTATCTGCACTCTTTTAATT----CAGGATCA--AAGAGATGTCACTTAATTTCAATTAACAGAGTGATAATCC-GACCACAGTAA------AGGACGA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGT------------GCC---CC-TGA------A-----CACC------TGCAC---A--ATTT---T---------TT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-ATTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--AG----TAATTGT-A-AAAA-------------------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----T----TTTTTTTATTTCATT-AAACCCCATACAATTA--TC-----------C--------------G--------------GT--------------------t
gi|21 : cagatgatattcaacaggtaggtactaaataaaacattctgttattagattagattatatgattccacaaagttgaaaactcttcaaatttaaaataattgagtgaaatcttataattactgtatttcccaagtataatccgcaggtgattttgaagccaaaaactggtggaaaaaaagctagcgtacgtctattatccacaggcataagttgtttactacatctgccattttgaaatctggaccaaaatgaaagattagttttgatatttttggagtaacaaaatctagactggtgtactgcatgattttgtaaaaaacgtaggtaaaacgttttgatgtgatataaagtgtgctaaagacaataaaatttgcgagtataaaatggtgttactgtaatttatgtgtatgtgtatttgggtaagtgcatcttttgagaaatattttggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattcagcagtctctgatgtctg--ACTTG-GG-------------T-----GCGGTTTATAATTGGCGA--TATACGGTAttaatggcgagtataaaaat
gi|24 : tcctgatgcttcttctaaaatggttataccaaaatagttttttgcaaattgggg--------------GT--------------------G----AAAATAGTGAATT-------AT--------TTG------------------------------TGTACCAGTCAAG------T--TAC---AT-AAAC---AG-ACTTCTGCTTTAAAGATCATGT-TAA---------CAA-ACAG-TTT-TGTCT--------ATTT-T-T-----CATTTGGAATTAATAAAATAC------ACAAAATATAC--TGAAA-A-T-GGTTTATAAACTTTGTTTATTGAAT----AGAAATCATAAAATATAAACCATATAAAACA----TG-TCTAAAACATTCAT-TGC--ATTGC-C-T---GTATACT-GTGAAAGTCCTGGGAAAATGCTataatccgcaggtgattttgaagccgaaactggtcgaaaaaagctagtatccgtctataatccgcaggcatgaatcagctgaaccagctgtttactacatctgccattttgaaatccagaccaaagtgaaagatgaattttgattggcttattatggagtaacaaaatctagactggtgtactgcattactttgtaaaaacataggtaaaacgttttgatgtgatgtatagtgtgttgaaaatttgcgagtaccaaatggtgttaccgaaattatttttatgtttgtgtatttggg
gi|24 : AAAGTCCTGG--GAAAATGC-T---T-CAGACGGGACC-------ATA-----T-A-TATT-----TTCT----GTTGT-CTATAGTTTAAC---CT-GCACCCCTGTTTA--ATCTTAAAA--ACtcagacgggaccatatatattttctgttgtctatagtttaacctgcacccctgtttaatcttaaaaac
gi|25 : gtgaaaatagtgaattatttgtgtaccagtcaagttacataaacagacttctgctttaaagatcatgttaacaaacagttttgtctatttttcatttggaattaataaaatacacaaaatatactgaaaatggtttataaactttgtttattgaatagaaatcataaaatataaaccatataaaacatgtctaaaacattcattgcattgcctgtatactgtg----AAAATAGTCAATTGAACAGAAT--------TTG-----------------AAT--AT-TCTTTTGTTCCAGTCTAG------T--TA----CT----T----GTACTTTCAGT------------T-TAA---------------AT-TTTATGT-TTTATAAAAGTTTATCCTTATTCATTTTGAAGTTACAAAATAC------ACAAAA-ACAC--T-AAATA-T-GGTTTATAAAC-GTGTTTATT---T----A---ATC------TATAAA-CATATAAGACA-------------AC-TTCCTGTGCATATTGCAT-T-ACAT----GTATGTTCGCAGTGAA-AAATGTTG--------TAGCA------GACGATTGTAAAATTAAGG--GAAAA--CTT---T-T-GACGATACCTGAA-GAAAAAAA----A----------TTCT----AT-ACTCT-TAGT
gi|26 : tCCAGTTTCGG-CTTTAAAATCACCTGCGG--ATTA----TACTTGGGTGCGGTTTATAATGGGAGA--TTTACGGTA
gi|27 : atttaagttagattttataataaagtcactcttgaagcctcgtgaagtgatttttaaactttttttacattgacTACACCAGTCTAGATTTTGT--TACTCCAT-AAATAA--------CCAAT------------CATAATTG------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----AATTTGGAAGTTACAGAATAC------ACAAAA-ATATA-C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAGTATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTCAAG-tcgaaaaaagctaatatccgttcataatctgcaggcatgaatcagatgaatcagttgttaactacatctgccattttgacatccggaccaaagtgaaagatgaattttgattggctaattatggagtaacaaattt
gi|29 : ctcgcaaattttattgtctctaacacactatatatcacatcaaaactttttacctactttttttacgaaataatgcagATGTGAAAACAGCAAAATATGTGAAAACAGTA-A-------AAA-A-T-GGTTTA---ACAGTGTT-GTTAATTTTTTAGTTATCGTAAA-TATAAAACCTATAAGGCA----TG-TTTAAAAC-ATCCT-T-CATATT---C-T-TCATTTACG-GTAAAAATCGCCAG-AAATGCTGTTGT
gi|3 : tgtcttttttgttttggaagtagcaaaatGGAAGTTTTATTTTAATTTCAAATGCTATATTATATTTTGTTTA------------CATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-ATCAAAACCCTCATAACCATCTCCTTTGTTATCACTGC-----------CG--------AGCAACTATAACACGTTCTAAACCCCTTTTC-ACCAACGAGGTTCTGAACACCTAC-TCATTGGTGTCACTA-T---AGACACT-----TGTCAAACAGTATTTGTGCTTTTT-AATT----CAAGATCA--AAGAGATGCCAATTA----------ACAG--TGATATTCC-GACGGCAGTAA------AGGACAA---AGAA----GGTACAAGTGGG-CGGA--GTCA-------A-------------A-TAAGC------------GTT---GC-CGA------A-----CACA------TGCAC---A--ATTT---T--------GTT----C--TTCCGA--AGTTC---T------AAATTT-GTTTTGTGT-CA-TTTTTAATCAATAAACCGGTAATAAC--T-------------------------TT----T--CA----TAATTGT-A-AAAAAAA--GCAATAC-------------AT----------AATTGTAA----------AA--A---ATAGT--AA-TA----TA-TATTACATTAT--CATT-AAA----AGGCGAGT----------------------------------------------GT--------------------A----AAAACAGCAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTCAGACA----TG-TTTAAAAC-TTCATGTGCTTTTTGCAA-T-ACGTTCAAG-ATGATAGGCATCAG-AAATACTGTTCTTGACTGGCCTTTGTTGAGGATCACAGTGTTAGTA--GGAAA--C-T---C-T-GATGAAACCTGAA-AAATAGAAT-T-ATTTTT-----TTCT----AT-AC-CT-TAGTATAAT---AC-AGACCCCAGTTTTAGACTTTTAAA--ACTTG-GG--AAAA----AACT-----GCCGATAATAATCATAGA--TTAACGGTAagtcgagcattaacttctgacggaacaaaatatatttttctgtactcctacctctttttttaataccttaaaact
gi|30 : ----AGAAATCATAAAATATAAAGCATGTGAGAAA----TG-TTTAAAAC-TTCCTGTGCTTTTTGCAC-T-ACGTTCAAG-ATTATAGTCATCAG-AAATACTGTTGCCGAATGGCCTTTGTTGATGATCACAAAGTTTTGG--GGAAA--C-C---C-T-GACAAGACATGAA-AAAAAAAAA-A-A-AAAA-----TTCT----AT-AC-AT-TAGTACAAC---AC-GCACCC--GTTTTAGACCTTAAAA--TCTTG-GA--AAAA----AACT-----GCAGATTATAATCCTATT--TTTATGGTAa
gi|31 : CAGAAT--------TTG-----------------AAT--AT-T---T-GCAACAGTCTAG------T--TA----GT-AAATAGAAG-ACTTCCGGT------------G-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTCT----CATTTGGAAGTTACAGATTAT------ACAATA-ATAC--C-AAA-AAG-GGTTTATCAGCTGTGTTTATTAAAT----AGGAATCATTAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTC-----TGATAGTCATCAG-AAATACTGTTGTCCACTGGCCTTTGTTGAta
gi|33 : AATATAAAGCAAGTAAGACA----TGTTTTAAAAT-TTCC-GTGCTAATTGCAG-T-ACGTTCAAG-ATCACAATCGTCAG-AAATGCTGCTTTTGACC-GCCATTGTTGAC-ATCG-ATAGTTTGGG--GGAAA--CTT---C-C-GACTCTACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TG-TAGTAT---------GCACCCCTGTTTAAGACCTTAAAA--ACTTT-GG--A
gi|35 : C-GACAGCAGCAA------AGGACGA---GGAA----AGTACAAGTGGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---G--ATTT---T--------CTT----G--TTCCAA--ATTTT---T------AAATTC-GTTTTGTTT-TA-TTTCTAATCAATAAACTGATAACAAT--T-------------------------AT----A--CA----TAATTGT-A-AAAAAAAT-GAAATTCATAATTGTAAAAAAT----------A---GTAA----------TATCA---ATA-TTTCA-TA----TA-TAtttttttttaattgcagttcaacaaaacaaaaat
gi|36 : GGGAATTCTATTTTCATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCATCTCGTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCACTTCTC-ACCAACGAGGTTCT
gi|37 : GAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATC-AAACCCTCAAAATCATCTCCTT-----------C-----------CA--------AGCAACAACAGCACGTTCTAAACCCTTTCTC-ACCAACGA
gi|38 : TATTAAATT-AAACAC-ATACAATTACCTC-----------C--------------CTTCAAATGAAAAGTAT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-ATACCAGTTTAG------C--TAT---AT-TAATAGTA----TTCCAGT------------T-TAAAATTTATGTTGACAAAGATGT-TGT-C---------TTT-TCA-----CATTTAGAACCAACACAATAC------ACAA-----------AAA-T-T-GGTTTAAAAACT
gi|39 : TGATAATCT-GGCACCAGGAA------AGGATAATGTGGCA----GACTCAATTTGG---AA--ATTAGC-----A-------------A-TTTACT-----------GCTTTTGCATGATG----A-----CACT------TGTGC---A--TTTTAAAT--------TTT----GGTTGTCAAGGATTTT---T------AAATTTTGTTTTGTTT-TA-TTTTTAATCCATAAATTGAT-----T--T-------------------------AC----TAGCAATGGTAATTAT-A-AAAt
gi|4 : GTTTCCAACACCTAC-TCAAACATGTCACT-------------------------CAGTATTCGCACTCTTT-AAAT----GAAGATCA--AAGAGATGTTGATTAGTTTCAATTAACAGTGTTATAATCG-GACAGCAGGAA------AGGACCA---GGAA----AGGACAA-TGGG----A--GTCA-------ATTTTGTAAATGAAA-TTTACT-----------GCC---GC-CGA------AAATGACACCGTCC--TGTAC---A--ACACA--T--------CTT----T--T---AA--ATTTTGGTTGGCCAAAAATTT---TTTA-AT-TAGTTTTTCATCCATACATTAAT--TAACCGT-------------------------AT----T--CA----TAATTAT-A-GAAAATAT---AATTA-------------AG----------A----CAA----------TGCAA---GTGTTTCCA-TAATTATA-TGTTTCCATATTAAATT-GATCACCATACACTTG--CG-----------CTGTTTAATGACAAGC--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--ATAT---ATATACAAGTCTAG------T--TT----AT-AAAT---AG-ACTTCTGGT------------T-TAc
gi|4 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatATTTGGAAGTAATAAAATAC------AAAAAA-ATAC--T-AAA-A-ACAGTTTATAAACTtactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatatttggaagtaataaaatacaaaaaaatactaaaaacagtttataaacttggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|40 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatgtttccaacacctactcaaacatgtcactcagtattcgcactctttaaatgaagatcaaagagatgttgattagtttcaattaacagtgttataatcggacagcaggaaaggaccaggaaaggacaatgggagtcaattttgtaaatgaaatttactgccgccgaaaatgacaccgtcctgtacaacacatcttttaaattttggttggccaaaaattttttaattagtttttcatccatacattaattaaccgtattcataattatagaaaatataattaagacaatgcaagtgtttccataattatatgtttccatattaaattgatcaccatacacttgcgctgtttaatgacaagcgtaaaaatagtgaattgaacagaatttgaatatatatatacaagtctagtttataaatagacttctggtttatactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatTTGTAAAAGATTAAAATGTTTGGGAGGGAAA--A-TGTCC-T-GACTA--CCTGAACAAATAAAAT-CCA-TTTT-----GTCC----AT-AC-TC-TAGTTTAACCTAACTGTAACCCT--TTAGGAC--TAAAA--ACTTA-AA--AAAAGAAAAACT-----GCCGGTTATAtggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|42 : taccggaaatgctgGTTGATGACTGAAAAGTTTGGG--AGAAA--C-T---TAC-AACGA------------TAAAATAT-A-TTTT-----TCCT----AT-AA-TC-TGATATTGC---CC-GCACCCTTGTTTGAGACCTTAAAAT-GTCTG-GGGCAAAA----AAC------ATGGGTTATAGTC
gi|43 : A---ATATTTAAAATA----TA-GATGTCCATATCGGATT-AAGTACTATAAAATCA--TC-----------C--------------T--------------TTTTAATGACA-----------AGTTTAAAATAGTGAATTGAACAGAAT--------TTG-----------------AATAAAC-T---TTGTTTCAGTtgcagattagggttacagatg
gi|44 : aaaagaggacaataattacaaaa--------------C--------------GT--------------------A----AAAATAATAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTAAAAGTTACAGAATAC------ACAATag
gi|45 : gagGATCAGAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--AA----AT-AAATTGAAG-ACTTCCAGT------------T-CAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACTATA-ATACA-C-AAA-A-C-GGTTTATAAAta
gi|46 : CACG-GTGAAATTCACCAG-AAATGCTAT----G----------GTTGATGATCGAAAAGTTCGGA--AGAAA--T-G---A-T-GTCGGGATCTGAA-TAGTTAGATAT-A-TTTTTGATATTCTAATGAT-AC-CT-TA
gi|47 : TTCTCAACATCTAC-TCAAACGTGTCACAA-T---TGCCACT-----TGTCAGATGGTATTCACACTCTTT-AATT----C---------AAGAGATGTCAATTA--TTAAAT-------GTGATAATCG-GACaaaaatttaagaaaa
gi|5 : CCTCTTCTT---CGACA--GTTCTCATTGCCTAC-TCAAACATATCACTA-TATTTGTCCCT-----TATCAAACGGTATTCACACTCTGT-AATT----GAAGATGATGAAGAGATGTCGGTTAGTTTCAATTAACAGAATGATAATCT-GACAGCAGGAA------ATGACTA---GAAA----AGTACCAGTGGG-CGGA--GTCA-------ATTTTGTA------A-TTGGCTTGCAATTTACTGCC---AC-AAA------A-----CATC------TGCCC---A--ATTT---T--------GTT----G--TCCCAG--ATCTT---T------AAATTT-GTTCTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--TATTCATAATTATAAAAAAATTGTAAAT----T--CA----TAATTGT-A-AAAAATAT-TAA-TTA-------------AG----------A----CAA----------TATAA---ATATTTTCAATA----TA-TATTTCTTTATTACATT-AAACACTATATAATTG--TC-----------T--------------C--------------ATTTAATGACGAGCAA------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TA----AT-A----GCAG-ATTTCTGGT------------T-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC------ATTTGGAAGTAACAGAATGC------ACAATA-ATAC--C-AAAGA-GTGGTTTATAAACTATGTTTATTAAAT----AGAAATCATAAAATATAAAATATGTAAGACA----TT-TTTATAAT-TTCCTGTGCTTATTGCAC-T-TTGTACAAG-ATGGTAACCGTCAG-AAATGCTG--------------TTGTTGATGATCGCAAAGTTTGGG--AGAAA--C-T---C-A-GGCAAGACCTGAA-AAATATAAT-T-A-ATTT-----TTCT----AT-AC-AC-TAGTATGAT---AG-GTACCCCAGTTTTA
gi|53 : cacgtcGGTTCTGAACACCTAC-ATACAAGTGTCACTA-T---TGA-ACT-----GGACAAATGGTATTCGCGCTTTTT-AATT----CAAGag
gi|54 : A-TATTTCCATATTAAATT-AAATACCATACAATTA--TC-----------C--------------T--------------GT--------------------
gi|55 : GGAATTTGCTATCTTT-AATT----GAAGATCA--AAGAGATGCCAGTTAGTTttgatgaca
gi|57 : agGGAAATTTTATTTTAATTTCAAATGCTATAT-ATA
gi|6 : CCACT--------CAA---GTATTTATGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTTAATTAACAGGGTGATAATCC-AACAGCAGTAACTGTTAAGGACAA---AGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------ATT---GC-CGA------A-----CACC------TGCAC---A--GTTT---T--------GTT----G--TCCCAA--AGTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATGAT--T-------------------------AT----T--CA----TAATTGT-T-AAAACAAT-GAAATTC-------------ATAATTGTTAAAA---GTAG----------TATTAGCTATATTTTCA-TA----TA-TAATTCTTTATTACATT-AAACACCATACAATTA--TC-----------CTGTTTAATGGCGAGC--------------GT--------------------G----AAAATAGTAAATTTATCAGAAT--------TTA-----------------AAT--A--T---TTGCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCGGGT------------T-TAG---------CGA-AAAG-TGT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-GTAC--C-AAA-AGG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----CG-TTTATAAC-TTTGTGTGCTTTTCGCAC-T-ATGTTCAAG-ATGATA--------------CTGTTCTCGACTGGATTTTGTTGGCGATCCCGAAGTTTGGG--GGAAA--C-T---C-C-GATAAGACCTGAA-AAA-AAAA----A-TTTT-----T--T----AT-AC-CT-TAGTATAAT---AC-GCACCCCTGTTTTGGACCTTAAAA--ACTTG-GG---GAA----AACT-----ACGGATTATAATCATATT--TTTACGGTAc
gi|7 : caaacCATCAACACTCTCAAAGTCATCTCCTT-----------C-----------
gi|8 : gcatgtaatttatgcacaaatggtttaacacacaggcactggtcacaatttttttttttagtatatttggtcatatagtatctatatagtagactggtcacaaactctttttttagtatattaaaattatggtcatgtagtaccgtattttcccaattataatctttactcaagtataatccgctggtgattttgaaagcaaaactggtgggaaaaagatagtatacatctattatctgcaggcatgaatcaattgtttacctcatccgccattttgaaattcagaccaaagtgaaagaagaatttggattggttcttcatggcgtaacaaaatcaatactggtgtactgcataattttgtaaaaaaacgtaggtgaaatgttttgatgtgatatatagtgtgttggagacaataaaatttgtgaatataaaatggtgttaccataattacttttatgtgtatttgggtaagaaaaagtgaaaataaaaacaaactattgacaatttttttaaatgcatctttcgagaaatatttggaccatcaccctttcactgtaattgcatcattcagcagtctctaatgtccgatgAATGATAACAAGTTCTAAACACCTTCTC-Aaatgacgctgtcc
gi|8 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttAAGTTCTAAACACCTTC-TCAAACGTGACACAA-T---TGTCAAG-----CACCAATTGGTATTC-TACTCTTT-AATT----GAAGATAA--AATAGAT---AATAAGTTTCAATTAACAGCGTG----TCCTG-----AGGAA------AGGACAA---GGAGGCTTAGT-CAATTTTG-T-AATTGTCATGG----A-------------ACTTCTT------------GTC---GC-CAAACAATGA-----CACC------TGTACATAA--ACTT---TAAATTATGTTT----G--TCTT-A--GTCTT---T------AAACTT-GTTTTGAG---A-TTTTTAATCCTTAAACTCAT-----T--T-------------------------AT----T--CA----TATTTAT-ATATAAAAA---AAATCC-------------------------A---ACAA----------TACAA---ATATTTCCA-T--------------TTTA----ATT-AAACACCATACACTGA--TC-----------CCATTTAATGATAAAC--------------GT--------------------A----AAAATAGACAAATGAACAGAAT--------TTG-----------------AAT--AT-aacgtgacacaattgtcaagcaccaattggtattctactctttaattgaagataaaatagataataagtttcaattaacagcgtgtcctgaggaaaggacaaggaggcttagtcaattttgtaattgtcatggaacttcttgtcgccaaacaatgacacctgtacataaactttaaattatgtttgtcttagtctttaaacttgttttgagatttttaatccttaaactcatttattcatatttatatataaaaaaaatccaacaatacaaatatttccattttaattaaacaccatacactgatcccatttaatgataaacgtaaaaatagacaaatgaacagaatttgaatatgtgta
gi|9 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttaatgataacACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------GATGTTGCTGAGCAACAAGAATACATTCTAAACCCCTTCTC-ACCGGCAAGGTTCTCAACATCTAC-TCAAACGCGTCACTA-C---TGCCACC-----TGTCAAACGGTACTCCCACTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGAAAAACT-GACATCAGTA------------AA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------GCC---AC-TGA------A-----CACC------TGCAT---C--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TT-TTTTTAATCAATAAACAGAAAATAAT--T-------------------------AT----T--TA----TAACTGT---AAAAAAAT-GAAATTC-------------AT----------A---ATgtgta
13 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATTTACCTTTATGTATATTCATTAAATTTTGATACTGCTTTACCTATTTTTGTCAGAGTTGAACTTAATACAGTATATCTCCAGTTATATTCCGCACTGGAGTATAATCTGCAGGTTATTTTGAAGCCAAAACTAGTGGAAAAAAGCAAGTATACGTTTATTATCCGTAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGACAAAAGTGAAAGATGAATTTTGATTGGTTATTTATTGAGTAACAAAATCTAGACTGGTGTACCGCTTAATTTTGTAAAAAACTTCGGTAAAACATTTTGATGTGATATATAGTGTGTTAGTGACATAAAACTTGCGACTATAAAATGGTGTTATTGAAATATCTTTATGTGTATTTGG
Unaligned ( gi|22 ): TGACCCTAATTTTACTCTATTTCCAAAGTATAATCCGCACTTGAGTATAATCCGCAGGTGATTTTGAAGTGAAAACTAGTGGAAAATTGCTAGTATACATCTATTATCTGCAGGCATGATTCAGTTGTTTACTACTTCTGCAATTTTGAAATCCTTACCAAAGTGAAAGATCAATTTTGATTGGTTATTCATGGAGTAACACAATCTAGACTGGTGTGCTGCATGATTTTGTCAAAAACGTAGGTAAAATATTTTGATGTGATATATATAGAGTGTACTTCAAAATCCCTATGGCTCAAAAATGACATGGTACTCAAAATCCCCTTGATGGGTGGCAT
Unaligned ( gi|23 ): AATCTCCAAGTATAAACCACACCCAAGTATAATCTGCAGGTGATTTTGAAGCCAAAACTGGTCGAAAAAAGCTAGTATCTGTCCATAATCCGCAGGCATGAATCAGATGAATCAGCTGTTTACCACATCCATCATTTTGAAATCCCAACCAAAGTGAAAGATGAATTTTGATTGGCTAATTATTGAGTAACGAAATCGAGACTGGTGTACTGCATAACTTTGTAAAAACGTAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGGAGACAATAAAACTTGCAAGTATAAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGG
Unaligned ( gi|28 ): ATTTATGTTTATTTATAGGTTATTTATTCCTGGTCATATTTTTTTTGTTTTTAAAGGGAATATACCATAAATCTCCTATTATAAACCGCACTCAAGTATAATCCGCAGGTGATTTTGAAATCGAAACTGGTCGAAAAAAGCTTGTATACGTCTATAATCCGCAGGCATGAATCAGATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGATCAAAGTGAAAGATAATTTTTGATTGGCTAATTATTGAGTAACAAAATCTAGACT
Unaligned ( gi|32 ): ACTACCGTAATCGTTTGATTATACCCCTTTGCCAAGTATAACCTGCAGGCTAATTTTGAAGCCAAAACTTGTGAAAAAAAAACTTATATCCATGAATAATACGCAGTTGTTTACTACTGCCGCCATTTTGAAATCGAAAGACAAATTTTGATTGGCTAGATTTTAAGTCACATAATCTAGACTGGCATACTGTTAATTTTGTAAAATCACATGTGATAACTACTATTAAATATTTTGTGTAA
Unaligned ( gi|34 ): TTTTAATTTAGACTTTATGTCATACTTTTGACAAATAACCACAGACCCTGGACTTTTGATTTTAACATACAGTAATCTTCCAATTATAACATGCCACCAAGTATACCCCGCATGCTGATTTTGAAGACAAAATTGGTGGAAAAAAGTAAATATATATCAATTATACACAGCCATTATATCTTCAAATCCAAATCTGTTCGCCATTTTGA
Unaligned ( gi|41 ): CTTTGATCTCTCGAATAAAAGTCTCCTCAGAGTATCACAGACTGATTTTGTATCCAAATCTGGTGGAAACATAGCTCTTGTATCCTGGCATATCACACAGCATGAAATTGAGAGTTTACCATGGCCACCATTTTAAAATCAATACAAAAG
Unaligned ( gi|48 ): ATGCAATTCAGTCTTTATTCATGTTCAATTAGTTATATAAAAAAAATTAGATATGCGTACACTCAACTAGTATTTACTGTTGATTGTTACTACCAT
Unaligned ( gi|49 ): GACTATTGCTTATTTTTTTATAAAAATATACCGTAATATTGCAAATATAAGACACCCCAAAGTATCACCTGCAGGCTGATTTTGAGGCAAAGATAA
Unaligned ( gi|50 ): ACTATTGGATAAAATATAGGTAAAACATTTTGATGTGATATATAGTATGTTAGAGACAATAAAACTTGCGAGTATAAAATGGTGTTACCGA
Unaligned ( gi|51 ): GCAGTTCAGCAAAACAAATGCGAGTTGAAAATATTTGCATAGGTTAAAAAAAGCCAGTGGATTAAAAAGTTAAAATTCTACCCCTG
Unaligned ( gi|52 ): ACTACAGTATTTCGCAAATTATAATCTGCACTCGAGTACAATCTGCAGGTGCTTTTGGAGCCAAAACTATTGGATAAAAT
Unaligned ( gi|56 ): AAATCCCCATGGCTCAAAAATGACAAAGTAGTCAAAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 555555555555555555555555555555555555555555555555555555555 1 666666666666666666666666666666666 4444444444444444444444444444444444444444 111111 111111 1111111111111 2222222222222222222222222 333333333333333333333333333333 11111111111 222222222222222222222222222222222222222222222222222222222222222 11111111111111111 1 1111 111111111111 1111111111 111111111 1111 222 111111111 11111
lowQualScore : 8 3 888 777777777777777777777777777777777777777777777777777777777 0 999999999999999999999999999999999 4 8 1 3 3 555 1 77777 0 0 2 6666 44 1 3 5 1 888888 555 6666 777 44 0000000000000000000000000000000000000000 555 3 333333 77777 555555 555555 6666666666666 6666 44 0 44 555 888888 3 3 3 2 33 6666666666666666666666666 5555 33 5555 555 888 666666666666666666666666666666 66666666666 55 555 6 6666 2 2 999 2 0 33 777777777777777777777777777777777777777777777777777777777777777 5555 77777777 44444444444444444 44 4 333 7 666666 22 2222 2 8 1 2 111111111111 2 6666666666 2 4 4 2 111111111 2 0 88888 1 666666 2 2222 4 000 0 5555 5555 2 2 2 1 2 2 2 2 0 0 1 2 1 888 66 4 0 6 33 33 666666666 1 3 2 2 7 2 2 55555 5555 2 4444 444 2 1 77 3 44 7777 11111 1 555 99
lowQualScore : . . ... ......................................................... . ................................. . . . . . ... . ..... . . . .... .. . . . . ...... ... .... ... .. ........................................ ... . ...... ..... ...... ...... ............. .... .. . .. ... ...... . . . . .. ......................... .... .. .... ... ... .............................. ........... .. ... . .... . . ... . . .. ............................................................... .... ........ ................. .. . ... . ...... .. .... . . . . ............ . .......... . . . . ......... . . ..... . ...... . .... . ... . .... .... . . . . . . . . . . . . . ... .. . . . .. .. ......... . . . . . . . ..... .... . .... ... . . .. . .. .... ..... . ... ..
lowQualScore : 0 2 222 000000000000000000000000000000000000000000000000000000000 0 111111111111111111111111111111111 0 2 9 6 3 888 4 77777 6 9 9 1111 22 8 5 7 0 888888 444 5555 000 22 3333333333333333333333333333333333333333 444 1 111111 77777 444444 555555 5555555555555 5555 22 2 22 444 888888 1 1 1 6 77 7777777777777777777777777 7777 77 7777 000 888 444444444444444444444444444444 00000000000 44 444 2 5555 9 0 666 7 5 44 666666666666666666666666666666666666666666666666666666666666666 0000 22222222 00000000000000000 88 0 777 9 111111 99 9999 2 4 9 2 444444444444 2 1111111111 4 7 7 4 222222222 4 1 22222 7 111111 2 3333 4 555 3 3333 0000 4 4 2 0 4 4 1 2 3 2 9 4 4 777 55 1 9 6 22 22 444444444 6 6 4 4 1 4 4 99999 0000 4 1111 777 7 0 33 3 66 7777 11111 0 111 99
consensus : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTTTACGGTA
Reference ( family-188 ) : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GNATATTTACGGTA
gi|1 : GGAAATTTTATTTTAATTTCAAATG----AT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCGTCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCAACGAGGTTCTAAACACCTACATC-CACGTGTCACTA-T---TGACACT-----TGTCAAACGGTATTCGCGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTACTTTCAATTAACAGAGTGATAATCC-GACAGCAGTAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GT-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCGA--ATTTT---T------TAATTT-GTTTGGTAA-TA-TTCTTAATCAATCAACTGATAATAAT--T-------------------------AT----T--CA----TCAGTGT-T-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACCCCATACAATTA--TC-----------C--------------T--------------GT--------------------A----AAAATAGTGAATTGAACAGATG--------TTG-----------------AATA-ATAT---TTGTACCAGTCTAG------T--TA----AT-AAATTGATG-ACTTCCGGT------------T-TAG---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATACATC--AA-A-G-GGTTTGTAAACTACGTTTATTTAAT----ATAAATAATAAAATATAAAGCATGTTAGACA----TG-TTTAAAAC-TTTGTGTGCTTTTTGCAC-T-ACGTTCAGG-ATGATAGGCATCAG-AAATACTGTTCTCGACTGGCCTTTGTTGACGATCGCAAAGTTAGCG--GGAAA--C-T---G-G-GATGAAACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AA-CA-TACTATAAA---CC-GCACCCCTGTTTCAGACCTTAAAA--AACTG-GG--AAAA----AACT-----GCGGTTTTTAATT-GGTTATTTACGGTA
gi|10 : AA----------AATGA---ATTTTATCC-TA----TAATA---CTTTAT-------AAACACCATACAGTTA--TC-----------C--------------C--------------GTTTACCGGTAATGACAAGCGTA----AAAATAATAAATGGAACAGAAT--------TCA-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TAT---AA-AAATAGAAG-ACTTCCGGT------------T-TAA----------GA-GAAG--TT-TGT-T--------TTTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAAC-TTTACATGCTTAATGCAC-T-AGGTTCAAG-ATCACAGTCGTTAG-AAATGTTGCTTT-GACC-GCCATTGTTGAC-ATCG-ATAGTTTGGA--GGAAA--CTT---C-C-GAC--TACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-TC-TC-TAGTATAAC---AC-GCATTCTTGTTTAAGATCTTAAAA--ACTTA-GG--AAAA----AA
gi|11 : atgtgtaaaaaccagaaTAATTAATAA--CAAAAATAAT--T-------------------------GT----T--CA----TAATTGT-A-AAAAAA-T-GAAATTC-------------AT----------AATTGTAAAAAATAGTTATATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACATCATACAATTA--TC-----------C--------------C--------------GTTTAATGGCGAGCGT------A----AAAATATTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCGCCAGTCAAG------T--TA----AT-AAGTAGAAG-ACTTCTGGT------------T-TAA---------CAA-AAAG-TTT-TAT-T--------GT--------------------GTTGCAGAATAC------ACAATT-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACATGTTTG-TTTAAAAC-TTTGTGTGCTTTTTGCGCGTAACGTTCAAG-ATGATAGTAATCAG-AAATACTGTTGTTGACTGGCCTTTGTTGATGATCGCAAATTTTGGG--GGAAA--C-T-------GATGAGACCTGAA-AAATAATTT-T-T-TTTT-----ATCT----AT-AC-AT-TAGTATAAT---AC-GCACCCCTGTTTTCGACCTTAAAA--A-TTG-GG--AAAA----AACT-----GCGGCTTATAATC-ATAGTTTTATGGTAaatttttgtagttcaaccaaacaaaaatgcgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaagttaaattctacccctgt
gi|12 : ACTCATCAAAATC-TCAAAATCATCTCCTTAGATGTCGCTGT-----------CA--------AGCAACAATAACACGTTTTCAACCCCTTCTCGACC-ACCAAGTTCTCAACACCTAT-TCAAAGGTGTCACTG-T---TACCACTGCCACTATCACATGGTATTCCCACTCTTT-AATTCTGACAGCAGCA--AAG-GATG
gi|12 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctTAATTCTGACAGCAGCAA------AGGATGA---GAAA----AGTACAAGTTGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CCA------A-----CACC------TGCAC---A--ATTT---T--------CAT----G--TCCCAA--ATTTT---T------TAATTC-GTTTTGTGT-TA-TTTTTAATCAAGTAACTGATAATAAT--T-------------------------AT----T--CA----TAATagaaaagtacaagttggcggagttaaattggcgccgcccaacacctgcacaattttcatgtcccaaattttttaattcgttttgtgttatttttaatcaagtaactgataataattattcataat
gi|13 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactcttACTCATTAAACCTCTCAAAGTCATCTTCTT-----------
gi|14 : ccgcaggtaaagttgaagccaaaactggtcgaagaaagctattgaacatctattatccgcaggcatgaatcagttgtttactacatccgccattttgaaatccgaaccaaagtgaagtattttgattggctaattatggagtaacgaaatcaagactagtgaactgcataactttgtaaaaacgtaggtaaaaagttttgacgtgatatatagcatgttagaaacaataaaatttgcaagtataatgtggtgttactattttttatgtgtatttgggtaagacaaaagggaaaatacaaacaaactattgacaatttttttatgtccattttgtgcagaacatttgggtcctaaagaggaccatcaccctctcactgtatctgcatcattcagctgtctctgatgtcagACTCATCAAAACTCTTTAAGTCATTTCCTT-----------CAATGT------CC--------AGCAACAATAACATATTCTCACCTCCTTCTC-ACCCACCAGGTTCTCAACACTTAC-CCAAACGTGTCACTATT---TGCCACT-----TGTCAAACAGTATTCGCACTCTTT-AATT----CAAGATCA--AGGAGATGTCAA-TAGTTTCAACTAACAGAGTGGTAATCC-GACTGTAGCAA------AGGACAA---GGAA----AGTACAAGTGGG-C--A--GTCA-------A-------------A-TTTGT------------GCT---GC-CAA------A-----CA------------------------------------------------CAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TGTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGTAA-AAAAAAAT-GAAATTC-------------AT----------A---ATtgacatcgctgtcgaacagatgccgaaactgttcgtca
gi|15 : aagataaaagggaaaattaaaacaaactattgacaattttttaagtgcatctcaatagaaatatttgggtcctaaaaaggggcaatcaccctctcaatgtatctgcatcattcagcagtctctgatgtccgAATGGAACAAAAT--------TGG-----------------AAT--AT-T---T-GCACCAATCTAG------T--TAT---AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-GAAGTTTT-TGT-T---------TTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGATTATAAACTGTGTTTATTAAAT----AAAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAGC-TTTTTGTGCTTATTGCTC-T-ATGTTCA---------------AG-AAATGCTGCTTTTGAC-AGCTGTTGTTGAC-ATCG-ATAATTTGGG--GGGAA--CTT---C-T-GAC--TACCTTAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TC-TAGTATAAC---AC-GCATCTCTGTTTAAGACCTTAAAA--ACTTA-GG--AAAA----AA
gi|16 : aaATACAATTA--TC-----------CAGGTTAAAAGCAAGT--------------GT--------------------A----AAAATAGTGAATTGAACAAAATTAGAATATTTGTACCANNNNNNNNNNAGAAT--AT-T---T-GTACCAGTCTAG------T--TA----AT-AAATTTAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------TTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAAT--ATACA-C-AAA-A-G-GGTTATTAAACTGTGTTTATTAAAT----AGAAATCATAAAATTTAAAGCATGTAAGACA----TG-TTTAAAAT-TTCCTGTGTTTGTTGCAT-A-ACGTTCAGG-ATGATAGTCATCAG-AAATACTGTTGCTGACTGGCCT---ATGACGAACGCAAAGTATGGA--AGAAA--C-T---C-T-GATGAGACCAGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-AT-TAGTATAAT---AC-GCACACCTGTTTTAGAGCTTAAAA--GCTTG-GG--AAAA----AATT-----GCAGATTATAATC-GTAT-TTTAattttttttgcaattcaaccaaacaaaaatgtgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaaaaaagttaaattctaaccctggca
gi|17 : caAAACATGTTAGTA-T---TGTCAAG-----TATGGAAGGGAATTTGCGCTCTTT-AATT----GAAGATCA--A-GAGAT--CAATTAGTTTCAATTAGTGCACTTATAATCT-CACAGCAGGAA------AGGACAA---GGGA----G----AGGTGGG-tactgt
gi|17 : tTGGGTCGGA--GTCAGTTTTGTA-------------A-TTGGCATGCAATTAACAGCC---GC-CAA------A-----CATTGACAAATGCAC---ATAACTT---T--------CTTTTTTG--TCATAG--AGTTT---T------AAATTT-G-TTTATGTAAA-TTTTCAATCCATAAACTGTTGTT--T--T-------------------------TT----T--CA----TAGCTAT-A-AAAAAAA-------TC-------------TT----------A--------------------CA---ATATTTACA-TA----TA-TAT-----------ATT-TAATG----ACAA------------------C--------------C--------------AT--------------------A----AAAATAGTGAATTGATCAGGAT--------TTA-----------------AAT--A--T---TTGTACCAGTCTAG------T--TA----gtgggttagtgttagtggtggaggggggtgtagggggatgggtcggagtcagttttgtaattggcatgcaattaacagccgccaaacattgacaaatgcacataactttcttttttgtcatagagttttaaatttgtttatgtaaattttcaatccataaactgttgtttttttcatagctataaaaaaaatcttacaatatttacatatatatatttaatgacaaccataaaaatagtgaattgatcaggatttaaatatttgtaccagtctagttatacacattatattatagacttgcagtgtatattgttgt
gi|18 : taaacatgttagtattgtcaagtatggaagggaatttgcgctctttaattgaagatcaagagatcaattagtttcaattagtgcacttataatctcacagcaggaaaggacaagggagaggtggggtgggttagtgttagtggtggaggggggtgtagggggaTAAT--T-------------------------ATAACCG--CA----TAATTAT-G-AAAAAAATTGAGA--C-------------A-----------A---TTAA-----------A-CA---ATATTTTCA-TG----TA-TACTTCCATATT-TATTCAAATGCAATGCCATTA--TC-----------T--------------T--------------GTTTAATGACAAGTTT------A----AAAATAGTGAATTTAACATTTT--------TTG-----------------AAT--AT-T---TTGTACCAGTCTAG------TATTA----AT-ACATGTTAG-ACTTCTGGT------------T-TAT---------------AT-TTTATGT-T---------TTT-TTA-----AATGTGGACGTAACAAATTAC------TCAATA-ATAC--T-AAA-A-ATGGCTTATTTACTGTGT-------------GGCAAACATAACATACAAAGCAAATAAGACA----TG-TTTAAAAC-TTCTTGTTCATATTGCAC-T-ACGTTCAAG-GTGAAATTTGACAT-AAA----------GAC-------------CGA----AAAGTTCGAG--AGAAA--C-T---T-TAGACGGGATCTGAA-AAGAAAAATAT-A-TTTT-----TTCT----GT-AC-TT-TGATATTAC---CC-ACACCTCTGTTTAAGATTTTAAtacacattatattatagacttgcagtgtatattgttgt
gi|19 : cATTTCTATATAACATT-AAACCCCATACAATTA--TCACATTTAATAGCAAG-----------C--------------AT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--TA----ATCAAAT-GAAG-TCTCGCGGT------------T-TAA---------CTA-AATG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAA---------TAC------ACAATA-ATACA-C-AAA-A-G-GGTTTATAAACTGCATTTATTTGAT----AGAAATCGTAAAATATAAAGCATGTAAGACA----TG-GTTAAAAC-TTCATGTGCTTTTTGCAC-T-TTGTTCAAG-ATGATAGTCATCAG-AAATACTGTTGTCGACTGGCCTTTGTTGACTATCGCAAAGTTTGGG--GGAAG--C-T---C-T-GACGAGACCTGAA-AAATATATT-T-T-TTTT-----ATAT----AT-AC-AT-TAGTATAAT---AT-GCACCCCTGTTT
gi|2 : ATTCATCAAAACCCTCAAAGTCATCTGCTT-----------CGATGTCGTTGTCA--------AGCAACGGTAACAGGTTCTCAACCCCTTCTC-ACCCACCAGGTTCTCAACACCTGC-TCAAACATGTCACTT-T---TGCCACT-----TGTCAAACGGTATCTGCACTCTTTTAATT----CAGGATCA--AAGAGATGTCACTTAATTTCAATTAACAGAGTGATAATCC-GACCACAGTAA------AGGACGA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGT------------GCC---CC-TGA------A-----CACC------TGCAC---A--ATTT---T---------TT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-ATTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--AG----TAATTGT-A-AAAA-------------------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----T----TTTTTTTATTTCATT-AAACCCCATACAATTA--TC-----------C--------------G--------------GT--------------------t
gi|24 : cagatgatattcaacaggtaggtactaaataaaacattctgttattagattagattatatgattccacaaagttgaaaactcttcaaatttaaaataattgagtgaaatcttataattactgtatttcccaagtataatccgcaggtgattttgaagccaaaaactggtggaaaaaaagctagcgtacgtctattatccacaggcataagttgtttactacatctgccattttgaaatctggaccaaaatgaaagattagttttgatatttttggagtaacaaaatctagactggtgtactgcatgattttgtaaaaaacgtaggtaaaacgttttgatgtgatataaagtgtgctaaagacaataaaatttgcgagtataaaatggtgttactgtaatttatgtgtatgtgtatttgggtaagtgcatcttttgagaaatattttggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattcagcagtctctgatgtctg--------------GT--------------------G----AAAATAGTGAATT-------AT--------TTG------------------------------TGTACCAGTCAAG------T--TAC---AT-AAAC---AG-ACTTCTGCTTTAAAGATCATGT-TAA---------CAA-ACAG-TTT-TGTCT--------ATTT-T-T-----CATTTGGAATTAATAAAATAC------ACAAAATATAC--TGAAA-A-T-GGTTTATAAACTTTGTTTATTGAAT----AGAAATCATAAAATATAAACCATATAAAACA----TG-TCTAAAACATTCAT-TGC--ATTGC-C-T---GTATACT-GTGAAAGTCCTGGGAAAATGCTttaatggcgagtataaaaat
gi|24 : AAAGTCCTGG--GAAAATGC-T---T-CAGACGGGACC-------ATA-----T-A-TATT-----TTCT----GTTGT-CTATAGTTTAAC---CT-GCACCCCTGTTTA--ATCTTAAAA--ACtcagacgggaccatatatattttctgttgtctatagtttaacctgcacccctgtttaatcttaaaaac
gi|25 : gtgaaaatagtgaattatttgtgtaccagtcaagttacataaacagacttctgctttaaagatcatgttaacaaacagttttgtctatttttcatttggaattaataaaatacacaaaatatactgaaaatggtttataaactttgtttattgaatagaaatcataaaatataaaccatataaaacatgtctaaaacattcattgcattgcctgtatactgtg----AAAATAGTCAATTGAACAGAAT--------TTG-----------------AAT--AT-TCTTTTGTTCCAGTCTAG------T--TA----CT----T----GTACTTTCAGT------------T-TAA---------------AT-TTTATGT-TTTATAAAAGTTTATCCTTATTCATTTTGAAGTTACAAAATAC------ACAAAA-ACAC--T-AAATA-T-GGTTTATAAAC-GTGTTTATT---T----A---ATC------TATAAA-CATATAAGACA-------------AC-TTCCTGTGCATATTGCAT-T-ACAT----GTATGTTCGCAGTGAA-AAATGTTG--------TAGCA------GACGATTGTAAAATTAAGG--GAAAA--CTT---T-T-GACGATACCTGAA-GAAAAAAA----A----------TTCT----AT-ACTCT-TAGT
gi|26 : tCCAGTTTCGG-CTTTAAAATCACCTGCGG--ATTA----TACTTGGGTGCGGTTTATAATG-GGAGATTTACGGTA
gi|27 : atttaagttagattttataataaagtcactcttgaagcctcgtgaagtgatttttaaactttttttacattgacTACACCAGTCTAGATTTTGT--TACTCCAT-AAATAA--------CCAAT------------CATAATTG------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----AATTTGGAAGTTACAGAATAC------ACAAAA-ATATA-C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAGTATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTCAAG-tcgaaaaaagctaatatccgttcataatctgcaggcatgaatcagatgaatcagttgttaactacatctgccattttgacatccggaccaaagtgaaagatgaattttgattggctaattatggagtaacaaattt
gi|29 : ctcgcaaattttattgtctctaacacactatatatcacatcaaaactttttacctactttttttacgaaataatgcagATGTGAAAACAGCAAAATATGTGAAAACAGTA-A-------AAA-A-T-GGTTTA---ACAGTGTT-GTTAATTTTTTAGTTATCGTAAA-TATAAAACCTATAAGGCA----TG-TTTAAAAC-ATCCT-T-CATATT---C-T-TCATTTACG-GTAAAAATCGCCAG-AAATGCTGTTGT
gi|3 : tgtcttttttgttttggaagtagcaaaatGGAAGTTTTATTTTAATTTCAAATGCTATATTATATTTTGTTTA------------CATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-ATCAAAACCCTCATAACCATCTCCTTTGTTATCACTGC-----------CG--------AGCAACTATAACACGTTCTAAACCCCTTTTC-ACCAACGAGGTTCTGAACACCTAC-TCATTGGTGTCACTA-T---AGACACT-----TGTCAAACAGTATTTGTGCTTTTT-AATT----CAAGATCA--AAGAGATGCCAATTA----------ACAG--TGATATTCC-GACGGCAGTAA------AGGACAA---AGAA----GGTACAAGTGGG-CGGA--GTCA-------A-------------A-TAAGC------------GTT---GC-CGA------A-----CACA------TGCAC---A--ATTT---T--------GTT----C--TTCCGA--AGTTC---T------AAATTT-GTTTTGTGT-CA-TTTTTAATCAATAAACCGGTAATAAC--T-------------------------TT----T--CA----TAATTGT-A-AAAAAAA--GCAATAC-------------AT----------AATTGTAA----------AA--A---ATAGT--AA-TA----TA-TATTACATTAT--CATT-AAA----AGGCGAGT----------------------------------------------GT--------------------A----AAAACAGCAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTCAGACA----TG-TTTAAAAC-TTCATGTGCTTTTTGCAA-T-ACGTTCAAG-ATGATAGGCATCAG-AAATACTGTTCTTGACTGGCCTTTGTTGAGGATCACAGTGTTAGTA--GGAAA--C-T---C-T-GATGAAACCTGAA-AAATAGAAT-T-ATTTTT-----TTCT----AT-AC-CT-TAGTATAAT---AC-AGACCCCAGTTTTAGACTTTTAAA--ACTTG-GG--AAAA----AACT-----GCCGATAATAATC-ATAGATTAACGGTAagtcgagcattaacttctgacggaacaaaatatatttttctgtactcctacctctttttttaataccttaaaact
gi|30 : ----AGAAATCATAAAATATAAAGCATGTGAGAAA----TG-TTTAAAAC-TTCCTGTGCTTTTTGCAC-T-ACGTTCAAG-ATTATAGTCATCAG-AAATACTGTTGCCGAATGGCCTTTGTTGATGATCACAAAGTTTTGG--GGAAA--C-C---C-T-GACAAGACATGAA-AAAAAAAAA-A-A-AAAA-----TTCT----AT-AC-AT-TAGTACAAC---AC-GCACCC--GTTTTAGACCTTAAAA--TCTTG-GA--AAAA----AACT-----GCAGATTATAATC-CTATTTTTATGGTAa
gi|31 : CAGAAT--------TTG-----------------AAT--AT-T---T-GCAACAGTCTAG------T--TA----GT-AAATAGAAG-ACTTCCGGT------------G-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTCT----CATTTGGAAGTTACAGATTAT------ACAATA-ATAC--C-AAA-AAG-GGTTTATCAGCTGTGTTTATTAAAT----AGGAATCATTAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTC-----TGATAGTCATCAG-AAATACTGTTGTCCACTGGCCTTTGTTGAta
gi|33 : AATATAAAGCAAGTAAGACA----TGTTTTAAAAT-TTCC-GTGCTAATTGCAG-T-ACGTTCAAG-ATCACAATCGTCAG-AAATGCTGCTTTTGACC-GCCATTGTTGAC-ATCG-ATAGTTTGGG--GGAAA--CTT---C-C-GACTCTACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TG-TAGTAT---------GCACCCCTGTTTAAGACCTTAAAA--ACTTT-GG--A
gi|35 : C-GACAGCAGCAA------AGGACGA---GGAA----AGTACAAGTGGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---G--ATTT---T--------CTT----G--TTCCAA--ATTTT---T------AAATTC-GTTTTGTTT-TA-TTTCTAATCAATAAACTGATAACAAT--T-------------------------AT----A--CA----TAATTGT-A-AAAAAAAT-GAAATTCATAATTGTAAAAAAT----------A---GTAA----------TATCA---ATA-TTTCA-TA----TA-TAtttttttttaattgcagttcaacaaaacaaaaat
gi|36 : GGGAATTCTATTTTCATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCATCTCGTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCACTTCTC-ACCAACGAGGTTCT
gi|37 : GAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATC-AAACCCTCAAAATCATCTCCTT-----------C-----------CA--------AGCAACAACAGCACGTTCTAAACCCTTTCTC-ACCAACGA
gi|38 : TATTAAATT-AAACAC-ATACAATTACCTC-----------C--------------CTTCAAATGAAAAGTAT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-ATACCAGTTTAG------C--TAT---AT-TAATAGTA----TTCCAGT------------T-TAAAATTTATGTTGACAAAGATGT-TGT-C---------TTT-TCA-----CATTTAGAACCAACACAATAC------ACAA-----------AAA-T-T-GGTTTAAAAACT
gi|39 : TGATAATCT-GGCACCAGGAA------AGGATAATGTGGCA----GACTCAATTTGG---AA--ATTAGC-----A-------------A-TTTACT-----------GCTTTTGCATGATG----A-----CACT------TGTGC---A--TTTTAAAT--------TTT----GGTTGTCAAGGATTTT---T------AAATTTTGTTTTGTTT-TA-TTTTTAATCCATAAATTGAT-----T--T-------------------------AC----TAGCAATGGTAATTAT-A-AAAt
gi|4 : GTTTCCAACACCTAC-TCAAACATGTCACT-------------------------CAGTATTCGCACTCTTT-AAAT----GAAGATCA--AAGAGATGTTGATTAGTTTCAATTAACAGTGTTATAATCG-GACAGCAGGAA------AGGACCA---GGAA----AGGACAA-TGGG----A--GTCA-------ATTTTGTAAATGAAA-TTTACT-----------GCC---GC-CGA------AAATGACACCGTCC--TGTAC---A--ACACA--T--------CTT----T--T---AA--ATTTTGGTTGGCCAAAAATTT---TTTA-AT-TAGTTTTTCATCCATACATTAAT--TAACCGT-------------------------AT----T--CA----TAATTAT-A-GAAAATAT---AATTA-------------AG----------A----CAA----------TGCAA---GTGTTTCCA-TAATTATA-TGTTTCCATATTAAATT-GATCACCATACACTTG--CG-----------CTGTTTAATGACAAGC--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--ATAT---ATATACAAGTCTAG------T--TT----AT-AAAT---AG-ACTTCTGGT------------T-TAc
gi|4 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatATTTGGAAGTAATAAAATAC------AAAAAA-ATAC--T-AAA-A-ACAGTTTATAAACTtactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatatttggaagtaataaaatacaaaaaaatactaaaaacagtttataaacttggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|40 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatgtttccaacacctactcaaacatgtcactcagtattcgcactctttaaatgaagatcaaagagatgttgattagtttcaattaacagtgttataatcggacagcaggaaaggaccaggaaaggacaatgggagtcaattttgtaaatgaaatttactgccgccgaaaatgacaccgtcctgtacaacacatcttttaaattttggttggccaaaaattttttaattagtttttcatccatacattaattaaccgtattcataattatagaaaatataattaagacaatgcaagtgtttccataattatatgtttccatattaaattgatcaccatacacttgcgctgtttaatgacaagcgtaaaaatagtgaattgaacagaatttgaatatatatatacaagtctagtttataaatagacttctggtttatactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatTTGTAAAAGATTAAAATGTTTGGGAGGGAAA--A-TGTCC-T-GACTA--CCTGAACAAATAAAAT-CCA-TTTT-----GTCC----AT-AC-TC-TAGTTTAACCTAACTGTAACCCT--TTAGGAC--TAAAA--ACTTA-AA--AAAAGAAAAACT-----GCCGGTTATAtggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|42 : taccggaaatgctgGTTGATGACTGAAAAGTTTGGG--AGAAA--C-T---TAC-AACGA------------TAAAATAT-A-TTTT-----TCCT----AT-AA-TC-TGATATTGC---CC-GCACCCTTGTTTGAGACCTTAAAAT-GTCTG-GGGCAAAA----AAC------ATGGGTTATAGTCTGCAGATT
gi|43 : A---ATATTTAAAATA----TA-GATGTCCATATCGGATT-AAGTACTATAAAATCA--TC-----------C--------------T--------------TTTTAATGACA-----------AGTTTAAAATAGTGAATTGAACAGAAT--------TTG-----------------AATAAAC-T---TTGTTTCAGTagggttacagatg
gi|44 : aaaagaggacaataattacaaaa--------------C--------------GT--------------------A----AAAATAATAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTAAAAGTTACAGAATAC------ACAATag
gi|45 : gagGATCAGAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--AA----AT-AAATTGAAG-ACTTCCAGT------------T-CAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACTATA-ATACA-C-AAA-A-C-GGTTTATAAAta
gi|46 : CACG-GTGAAATTCACCAG-AAATGCTAT----G----------GTTGATGATCGAAAAGTTCGGA--AGAAA--T-G---A-T-GTCGGGATCTGAA-TAGTTAGATAT-A-TTTTTGATATTCTAATGAT-AC-CT-TA
gi|47 : TTCTCAACATCTAC-TCAAACGTGTCACAA-T---TGCCACT-----TGTCAGATGGTATTCACACTCTTT-AATT----C---------AAGAGATGTCAATTA--TTAAAT-------GTGATAATCG-GACaaaaatttaagaaaa
gi|5 : CCTCTTCTT---CGACA--GTTCTCATTGCCTAC-TCAAACATATCACTA-TATTTGTCCCT-----TATCAAACGGTATTCACACTCTGT-AATT----GAAGATGATGAAGAGATGTCGGTTAGTTTCAATTAACAGAATGATAATCT-GACAGCAGGAA------ATGACTA---GAAA----AGTACCAGTGGG-CGGA--GTCA-------ATTTTGTA------A-TTGGCTTGCAATTTACTGCC---AC-AAA------A-----CATC------TGCCC---A--ATTT---T--------GTT----G--TCCCAG--ATCTT---T------AAATTT-GTTCTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--TATTCATAATTATAAAAAAATTGTAAAT----T--CA----TAATTGT-A-AAAAATAT-TAA-TTA-------------AG----------A----CAA----------TATAA---ATATTTTCAATA----TA-TATTTCTTTATTACATT-AAACACTATATAATTG--TC-----------T--------------C--------------ATTTAATGACGAGCAA------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TA----AT-A----GCAG-ATTTCTGGT------------T-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC------ATTTGGAAGTAACAGAATGC------ACAATA-ATAC--C-AAAGA-GTGGTTTATAAACTATGTTTATTAAAT----AGAAATCATAAAATATAAAATATGTAAGACA----TT-TTTATAAT-TTCCTGTGCTTATTGCAC-T-TTGTACAAG-ATGGTAACCGTCAG-AAATGCTG--------------TTGTTGATGATCGCAAAGTTTGGG--AGAAA--C-T---C-A-GGCAAGACCTGAA-AAATATAAT-T-A-ATTT-----TTCT----AT-AC-AC-TAGTATGAT---AG-GTACCCCAGTTTTA
gi|53 : cacgtcGGTTCTGAACACCTAC-ATACAAGTGTCACTA-T---TGA-ACT-----GGACAAATGGTATTCGCGCTTTTT-AATT----CAAGag
gi|54 : A-TATTTCCATATTAAATT-AAATACCATACAATTA--TC-----------C--------------T--------------GT--------------------
gi|55 : GGAATTTGCTATCTTT-AATT----GAAGATCA--AAGAGATGCCAGTTAGTTttgatgaca
gi|57 : agGGAAATTTTATTTTAATTTCAAATGCTATAT-ATA
gi|6 : CCACT--------CAA---GTATTTATGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTTAATTAACAGGGTGATAATCC-AACAGCAGTAACTGTTAAGGACAA---AGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------ATT---GC-CGA------A-----CACC------TGCAC---A--GTTT---T--------GTT----G--TCCCAA--AGTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATGAT--T-------------------------AT----T--CA----TAATTGT-T-AAAACAAT-GAAATTC-------------ATAATTGTTAAAA---GTAG----------TATTAGCTATATTTTCA-TA----TA-TAATTCTTTATTACATT-AAACACCATACAATTA--TC-----------CTGTTTAATGGCGAGC--------------GT--------------------G----AAAATAGTAAATTTATCAGAAT--------TTA-----------------AAT--A--T---TTGCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCGGGT------------T-TAG---------CGA-AAAG-TGT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-GTAC--C-AAA-AGG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----CG-TTTATAAC-TTTGTGTGCTTTTCGCAC-T-ATGTTCAAG-ATGATA--------------CTGTTCTCGACTGGATTTTGTTGGCGATCCCGAAGTTTGGG--GGAAA--C-T---C-C-GATAAGACCTGAA-AAA-AAAA----A-TTTT-----T--T----AT-AC-CT-TAGTATAAT---AC-GCACCCCTGTTTTGGACCTTAAAA--ACTTG-GG---GAA----AACT-----ACGGATTATAATC-ATATTTTTACGGTAc
gi|7 : caaacCATCAACACTCTCAAAGTCATCTCCTT-----------C-----------
gi|8 : gcatgtaatttatgcacaaatggtttaacacacaggcactggtcacaatttttttttttagtatatttggtcatatagtatctatatagtagactggtcacaaactctttttttagtatattaaaattatggtcatgtagtaccgtattttcccaattataatctttactcaagtataatccgctggtgattttgaaagcaaaactggtgggaaaaagatagtatacatctattatctgcaggcatgaatcaattgtttacctcatccgccattttgaaattcagaccaaagtgaaagaagaatttggattggttcttcatggcgtaacaaaatcaatactggtgtactgcataattttgtaaaaaaacgtaggtgaaatgttttgatgtgatatatagtgtgttggagacaataaaatttgtgaatataaaatggtgttaccataattacttttatgtgtatttgggtaagaaaaagtgaaaataaaaacaaactattgacaatttttttaaatgcatctttcgagaaatatttggaccatcaccctttcactgtaattgcatcattcagcagtctctaatgtccgatgAATGATAACAAGTTCTAAACACCTTCTC-Aaatgacgctgtcc
gi|8 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttAAGTTCTAAACACCTTC-TCAAACGTGACACAA-T---TGTCAAG-----CACCAATTGGTATTC-TACTCTTT-AATT----GAAGATAA--AATAGAT---AATAAGTTTCAATTAACAGCGTG----TCCTG-----AGGAA------AGGACAA---GGAGGCTTAGT-CAATTTTG-T-AATTGTCATGG----A-------------ACTTCTT------------GTC---GC-CAAACAATGA-----CACC------TGTACATAA--ACTT---TAAATTATGTTT----G--TCTT-A--GTCTT---T------AAACTT-GTTTTGAG---A-TTTTTAATCCTTAAACTCAT-----T--T-------------------------AT----T--CA----TATTTAT-ATATAAAAA---AAATCC-------------------------A---ACAA----------TACAA---ATATTTCCA-T--------------TTTA----ATT-AAACACCATACACTGA--TC-----------CCATTTAATGATAAAC--------------GT--------------------A----AAAATAGACAAATGAACAGAAT--------TTG-----------------AAT--AT-aacgtgacacaattgtcaagcaccaattggtattctactctttaattgaagataaaatagataataagtttcaattaacagcgtgtcctgaggaaaggacaaggaggcttagtcaattttgtaattgtcatggaacttcttgtcgccaaacaatgacacctgtacataaactttaaattatgtttgtcttagtctttaaacttgttttgagatttttaatccttaaactcatttattcatatttatatataaaaaaaatccaacaatacaaatatttccattttaattaaacaccatacactgatcccatttaatgataaacgtaaaaatagacaaatgaacagaatttgaatatgtgta
gi|9 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttaatgataacACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------GATGTTGCTGAGCAACAAGAATACATTCTAAACCCCTTCTC-ACCGGCAAGGTTCTCAACATCTAC-TCAAACGCGTCACTA-C---TGCCACC-----TGTCAAACGGTACTCCCACTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGAAAAACT-GACATCAGTA------------AA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------GCC---AC-TGA------A-----CACC------TGCAT---C--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TT-TTTTTAATCAATAAACAGAAAATAAT--T-------------------------AT----T--TA----TAACTGT---AAAAAAAT-GAAATTC-------------AT----------A---ATgtgta
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATTTACCTTTATGTATATTCATTAAATTTTGATACTGCTTTACCTATTTTTGTCAGAGTTGAACTTAATACAGTATATCTCCAGTTATATTCCGCACTGGAGTATAATCTGCAGGTTATTTTGAAGCCAAAACTAGTGGAAAAAAGCAAGTATACGTTTATTATCCGTAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGACAAAAGTGAAAGATGAATTTTGATTGGTTATTTATTGAGTAACAAAATCTAGACTGGTGTACCGCTTAATTTTGTAAAAAACTTCGGTAAAACATTTTGATGTGATATATAGTGTGTTAGTGACATAAAACTTGCGACTATAAAATGGTGTTATTGAAATATCTTTATGTGTATTTGG
Unaligned ( gi|21 ): TCCTGATGCTTCTTCTAAAATGGTTATACCAAAATAGTTTTTTGCAAATTGGGGTACCGTATATCGCCAATTATAAACCGCACCCAAGTATAATCCGCAGGTGATTTTGAAGCCGAAACTGGTCGAAAAAAGCTAGTATCCGTCTATAATCCGCAGGCATGAATCAGCTGAACCAGCTGTTTACTACATCTGCCATTTTGAAATCCAGACCAAAGTGAAAGATGAATTTTGATTGGCTTATTATGGAGTAACAAAATCTAGACTGGTGTACTGCATTACTTTGTAAAAACATAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGAAAATTTGCGAGTACCAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGGG
Unaligned ( gi|22 ): TGACCCTAATTTTACTCTATTTCCAAAGTATAATCCGCACTTGAGTATAATCCGCAGGTGATTTTGAAGTGAAAACTAGTGGAAAATTGCTAGTATACATCTATTATCTGCAGGCATGATTCAGTTGTTTACTACTTCTGCAATTTTGAAATCCTTACCAAAGTGAAAGATCAATTTTGATTGGTTATTCATGGAGTAACACAATCTAGACTGGTGTGCTGCATGATTTTGTCAAAAACGTAGGTAAAATATTTTGATGTGATATATATAGAGTGTACTTCAAAATCCCTATGGCTCAAAAATGACATGGTACTCAAAATCCCCTTGATGGGTGGCAT
Unaligned ( gi|23 ): AATCTCCAAGTATAAACCACACCCAAGTATAATCTGCAGGTGATTTTGAAGCCAAAACTGGTCGAAAAAAGCTAGTATCTGTCCATAATCCGCAGGCATGAATCAGATGAATCAGCTGTTTACCACATCCATCATTTTGAAATCCCAACCAAAGTGAAAGATGAATTTTGATTGGCTAATTATTGAGTAACGAAATCGAGACTGGTGTACTGCATAACTTTGTAAAAACGTAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGGAGACAATAAAACTTGCAAGTATAAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGG
Unaligned ( gi|28 ): ATTTATGTTTATTTATAGGTTATTTATTCCTGGTCATATTTTTTTTGTTTTTAAAGGGAATATACCATAAATCTCCTATTATAAACCGCACTCAAGTATAATCCGCAGGTGATTTTGAAATCGAAACTGGTCGAAAAAAGCTTGTATACGTCTATAATCCGCAGGCATGAATCAGATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGATCAAAGTGAAAGATAATTTTTGATTGGCTAATTATTGAGTAACAAAATCTAGACT
Unaligned ( gi|32 ): ACTACCGTAATCGTTTGATTATACCCCTTTGCCAAGTATAACCTGCAGGCTAATTTTGAAGCCAAAACTTGTGAAAAAAAAACTTATATCCATGAATAATACGCAGTTGTTTACTACTGCCGCCATTTTGAAATCGAAAGACAAATTTTGATTGGCTAGATTTTAAGTCACATAATCTAGACTGGCATACTGTTAATTTTGTAAAATCACATGTGATAACTACTATTAAATATTTTGTGTAA
Unaligned ( gi|34 ): TTTTAATTTAGACTTTATGTCATACTTTTGACAAATAACCACAGACCCTGGACTTTTGATTTTAACATACAGTAATCTTCCAATTATAACATGCCACCAAGTATACCCCGCATGCTGATTTTGAAGACAAAATTGGTGGAAAAAAGTAAATATATATCAATTATACACAGCCATTATATCTTCAAATCCAAATCTGTTCGCCATTTTGA
Unaligned ( gi|41 ): CTTTGATCTCTCGAATAAAAGTCTCCTCAGAGTATCACAGACTGATTTTGTATCCAAATCTGGTGGAAACATAGCTCTTGTATCCTGGCATATCACACAGCATGAAATTGAGAGTTTACCATGGCCACCATTTTAAAATCAATACAAAAG
Unaligned ( gi|48 ): ATGCAATTCAGTCTTTATTCATGTTCAATTAGTTATATAAAAAAAATTAGATATGCGTACACTCAACTAGTATTTACTGTTGATTGTTACTACCAT
Unaligned ( gi|49 ): GACTATTGCTTATTTTTTTATAAAAATATACCGTAATATTGCAAATATAAGACACCCCAAAGTATCACCTGCAGGCTGATTTTGAGGCAAAGATAA
Unaligned ( gi|50 ): ACTATTGGATAAAATATAGGTAAAACATTTTGATGTGATATATAGTATGTTAGAGACAATAAAACTTGCGAGTATAAAATGGTGTTACCGA
Unaligned ( gi|51 ): GCAGTTCAGCAAAACAAATGCGAGTTGAAAATATTTGCATAGGTTAAAAAAAGCCAGTGGATTAAAAAGTTAAAATTCTACCCCTG
Unaligned ( gi|52 ): ACTACAGTATTTCGCAAATTATAATCTGCACTCGAGTACAATCTGCAGGTGCTTTTGGAGCCAAAACTATTGGATAAAAT
Unaligned ( gi|56 ): AAATCCCCATGGCTCAAAAATGACAAAGTAGTCAAAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 555555555555555555555555555555555555555555555555555555555 1 666666666666666666666666666666666 4444444444444444444444444444444444444444 111111 111111 1111111111111 2222222222222222222222222 333333333333333333333333333333 11111111111 222222222222222222222222222222222222222222222222222222222222222 11111111111111111 1 1111 111111111111 1111111111 111111111 1111 222 111111111 11111
lowQualScore : 8 3 888 777777777777777777777777777777777777777777777777777777777 0 999999999999999999999999999999999 4 8 1 3 3 555 1 77777 0 0 2 6666 44 1 3 5 1 888888 555 6666 777 44 0000000000000000000000000000000000000000 555 3 333333 77777 555555 555555 6666666666666 6666 44 0 44 555 888888 3 3 3 2 33 6666666666666666666666666 5555 33 5555 555 888 666666666666666666666666666666 66666666666 55 555 6 6666 2 2 999 2 0 33 777777777777777777777777777777777777777777777777777777777777777 5555 77777777 44444444444444444 44 4 333 7 666666 22 2222 2 8 1 2 111111111111 2 6666666666 2 4 4 2 111111111 2 0 88888 1 666666 2 2222 4 000 0 5555 5555 2 2 2 1 2 2 2 2 0 0 1 2 1 888 66 4 0 6 33 33 666666666 1 3 2 2 7 2 2 55555 5555 2 4444 444 2 1 77 3 44 7777 11111 1 5 22 5
lowQualScore : . . ... ......................................................... . ................................. . . . . . ... . ..... . . . .... .. . . . . ...... ... .... ... .. ........................................ ... . ...... ..... ...... ...... ............. .... .. . .. ... ...... . . . . .. ......................... .... .. .... ... ... .............................. ........... .. ... . .... . . ... . . .. ............................................................... .... ........ ................. .. . ... . ...... .. .... . . . . ............ . .......... . . . . ......... . . ..... . ...... . .... . ... . .... .... . . . . . . . . . . . . . ... .. . . . .. .. ......... . . . . . . . ..... .... . .... ... . . .. . .. .... ..... . . .. .
lowQualScore : 0 2 222 000000000000000000000000000000000000000000000000000000000 0 111111111111111111111111111111111 0 2 9 6 3 888 4 77777 6 9 9 1111 22 8 5 7 0 888888 444 5555 000 22 3333333333333333333333333333333333333333 444 1 111111 77777 444444 555555 5555555555555 5555 22 2 22 444 888888 1 1 1 6 77 7777777777777777777777777 7777 77 7777 000 888 444444444444444444444444444444 00000000000 44 444 2 5555 9 0 666 7 5 44 666666666666666666666666666666666666666666666666666666666666666 0000 22222222 00000000000000000 88 0 777 9 111111 99 9999 2 4 9 2 444444444444 2 1111111111 4 7 7 4 222222222 4 1 22222 7 111111 2 3333 4 555 3 3333 0000 4 4 2 0 4 4 1 2 3 2 9 4 4 777 55 1 9 6 22 22 444444444 6 6 4 4 1 4 4 99999 0000 4 1111 777 7 0 33 3 66 7777 11111 0 0 00 0
consensus : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
Reference ( family-188 ) : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
gi|1 : GGAAATTTTATTTTAATTTCAAATG----AT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCGTCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCAACGAGGTTCTAAACACCTACATC-CACGTGTCACTA-T---TGACACT-----TGTCAAACGGTATTCGCGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTACTTTCAATTAACAGAGTGATAATCC-GACAGCAGTAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GT-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCGA--ATTTT---T------TAATTT-GTTTGGTAA-TA-TTCTTAATCAATCAACTGATAATAAT--T-------------------------AT----T--CA----TCAGTGT-T-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACCCCATACAATTA--TC-----------C--------------T--------------GT--------------------A----AAAATAGTGAATTGAACAGATG--------TTG-----------------AATA-ATAT---TTGTACCAGTCTAG------T--TA----AT-AAATTGATG-ACTTCCGGT------------T-TAG---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATACATC--AA-A-G-GGTTTGTAAACTACGTTTATTTAAT----ATAAATAATAAAATATAAAGCATGTTAGACA----TG-TTTAAAAC-TTTGTGTGCTTTTTGCAC-T-ACGTTCAGG-ATGATAGGCATCAG-AAATACTGTTCTCGACTGGCCTTTGTTGACGATCGCAAAGTTAGCG--GGAAA--C-T---G-G-GATGAAACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AA-CA-TACTATAAA---CC-GCACCCCTGTTTCAGACCTTAAAA--AACTG-GG--AAAA----AACT-----GCGGTTTTTAATT-GGTTATT-TACGGTA
gi|10 : AA----------AATGA---ATTTTATCC-TA----TAATA---CTTTAT-------AAACACCATACAGTTA--TC-----------C--------------C--------------GTTTACCGGTAATGACAAGCGTA----AAAATAATAAATGGAACAGAAT--------TCA-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TAT---AA-AAATAGAAG-ACTTCCGGT------------T-TAA----------GA-GAAG--TT-TGT-T--------TTTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAAC-TTTACATGCTTAATGCAC-T-AGGTTCAAG-ATCACAGTCGTTAG-AAATGTTGCTTT-GACC-GCCATTGTTGAC-ATCG-ATAGTTTGGA--GGAAA--CTT---C-C-GAC--TACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-TC-TC-TAGTATAAC---AC-GCATTCTTGTTTAAGATCTTAAAA--ACTTA-GG--AAAA----AA
gi|11 : atgtgtaaaaaccagaaTAATTAATAA--CAAAAATAAT--T-------------------------GT----T--CA----TAATTGT-A-AAAAAA-T-GAAATTC-------------AT----------AATTGTAAAAAATAGTTATATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACATCATACAATTA--TC-----------C--------------C--------------GTTTAATGGCGAGCGT------A----AAAATATTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCGCCAGTCAAG------T--TA----AT-AAGTAGAAG-ACTTCTGGT------------T-TAA---------CAA-AAAG-TTT-TAT-T--------GT--------------------GTTGCAGAATAC------ACAATT-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACATGTTTG-TTTAAAAC-TTTGTGTGCTTTTTGCGCGTAACGTTCAAG-ATGATAGTAATCAG-AAATACTGTTGTTGACTGGCCTTTGTTGATGATCGCAAATTTTGGG--GGAAA--C-T-------GATGAGACCTGAA-AAATAATTT-T-T-TTTT-----ATCT----AT-AC-AT-TAGTATAAT---AC-GCACCCCTGTTTTCGACCTTAAAA--A-TTG-GG--AAAA----AACT-----GCGGCTTATAATC-ATAGTTT-TATGGTAaatttttgtagttcaaccaaacaaaaatgcgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaagttaaattctacccctgt
gi|12 : ACTCATCAAAATC-TCAAAATCATCTCCTTAGATGTCGCTGT-----------CA--------AGCAACAATAACACGTTTTCAACCCCTTCTCGACC-ACCAAGTTCTCAACACCTAT-TCAAAGGTGTCACTG-T---TACCACTGCCACTATCACATGGTATTCCCACTCTTT-AATTCTGACAGCAGCA--AAG-GATG
gi|12 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctTAATTCTGACAGCAGCAA------AGGATGA---GAAA----AGTACAAGTTGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CCA------A-----CACC------TGCAC---A--ATTT---T--------CAT----G--TCCCAA--ATTTT---T------TAATTC-GTTTTGTGT-TA-TTTTTAATCAAGTAACTGATAATAAT--T-------------------------AT----T--CA----TAATagaaaagtacaagttggcggagttaaattggcgccgcccaacacctgcacaattttcatgtcccaaattttttaattcgttttgtgttatttttaatcaagtaactgataataattattcataat
gi|13 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactcttACTCATTAAACCTCTCAAAGTCATCTTCTT-----------
gi|14 : ccgcaggtaaagttgaagccaaaactggtcgaagaaagctattgaacatctattatccgcaggcatgaatcagttgtttactacatccgccattttgaaatccgaaccaaagtgaagtattttgattggctaattatggagtaacgaaatcaagactagtgaactgcataactttgtaaaaacgtaggtaaaaagttttgacgtgatatatagcatgttagaaacaataaaatttgcaagtataatgtggtgttactattttttatgtgtatttgggtaagacaaaagggaaaatacaaacaaactattgacaatttttttatgtccattttgtgcagaacatttgggtcctaaagaggaccatcaccctctcactgtatctgcatcattcagctgtctctgatgtcagACTCATCAAAACTCTTTAAGTCATTTCCTT-----------CAATGT------CC--------AGCAACAATAACATATTCTCACCTCCTTCTC-ACCCACCAGGTTCTCAACACTTAC-CCAAACGTGTCACTATT---TGCCACT-----TGTCAAACAGTATTCGCACTCTTT-AATT----CAAGATCA--AGGAGATGTCAA-TAGTTTCAACTAACAGAGTGGTAATCC-GACTGTAGCAA------AGGACAA---GGAA----AGTACAAGTGGG-C--A--GTCA-------A-------------A-TTTGT------------GCT---GC-CAA------A-----CA------------------------------------------------CAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TGTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGTAA-AAAAAAAT-GAAATTC-------------AT----------A---ATtgacatcgctgtcgaacagatgccgaaactgttcgtca
gi|15 : aagataaaagggaaaattaaaacaaactattgacaattttttaagtgcatctcaatagaaatatttgggtcctaaaaaggggcaatcaccctctcaatgtatctgcatcattcagcagtctctgatgtccgAATGGAACAAAAT--------TGG-----------------AAT--AT-T---T-GCACCAATCTAG------T--TAT---AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-GAAGTTTT-TGT-T---------TTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGATTATAAACTGTGTTTATTAAAT----AAAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAGC-TTTTTGTGCTTATTGCTC-T-ATGTTCA---------------AG-AAATGCTGCTTTTGAC-AGCTGTTGTTGAC-ATCG-ATAATTTGGG--GGGAA--CTT---C-T-GAC--TACCTTAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TC-TAGTATAAC---AC-GCATCTCTGTTTAAGACCTTAAAA--ACTTA-GG--AAAA----AA
gi|16 : aaATACAATTA--TC-----------CAGGTTAAAAGCAAGT--------------GT--------------------A----AAAATAGTGAATTGAACAAAATTAGAATATTTGTACCANNNNNNNNNNAGAAT--AT-T---T-GTACCAGTCTAG------T--TA----AT-AAATTTAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------TTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAAT--ATACA-C-AAA-A-G-GGTTATTAAACTGTGTTTATTAAAT----AGAAATCATAAAATTTAAAGCATGTAAGACA----TG-TTTAAAAT-TTCCTGTGTTTGTTGCAT-A-ACGTTCAGG-ATGATAGTCATCAG-AAATACTGTTGCTGACTGGCCT---ATGACGAACGCAAAGTATGGA--AGAAA--C-T---C-T-GATGAGACCAGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-AT-TAGTATAAT---AC-GCACACCTGTTTTAGAGCTTAAAA--GCTTG-GG--AAAA----AATT-----GCAGATTATAATC-GTATTTTATACTGTattttttttgcaattcaaccaaacaaaaatgtgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaaaaaagttaaattctaaccctggca
gi|17 : caAAACATGTTAGTA-T---TGTCAAG-----TATGGAAGGGAATTTGCGCTCTTT-AATT----GAAGATCA--A-GAGAT--CAATTAGTTTCAATTAGTGCACTTATAATCT-CACAGCAGGAA------AGGACAA---GGGA----G----AGGTGGG-
gi|17 : tTGGGTCGGA--GTCAGTTTTGTA-------------A-TTGGCATGCAATTAACAGCC---GC-CAA------A-----CATTGACAAATGCAC---ATAACTT---T--------CTTTTTTG--TCATAG--AGTTT---T------AAATTT-G-TTTATGTAAA-TTTTCAATCCATAAACTGTTGTT--T--T-------------------------TT----T--CA----TAGCTAT-A-AAAAAAA-------TC-------------TT----------A--------------------CA---ATATTTACA-TA----TA-TAT-----------ATT-TAATG----ACAA------------------C--------------C--------------AT--------------------A----AAAATAGTGAATTGATCAGGAT--------TTA-----------------AAT--A--T---TTGTACCAGTCTAG------T--TA----gtgggttagtgttagtggtggaggggggtgtagggggatgggtcggagtcagttttgtaattggcatgcaattaacagccgccaaacattgacaaatgcacataactttcttttttgtcatagagttttaaatttgtttatgtaaattttcaatccataaactgttgtttttttcatagctataaaaaaaatcttacaatatttacatatatatatttaatgacaaccataaaaatagtgaattgatcaggatttaaatatttgtaccagtctagttatacacattatattatagacttgcagtgtatattgttgt
gi|18 : taaacatgttagtattgtcaagtatggaagggaatttgcgctctttaattgaagatcaagagatcaattagtttcaattagtgcacttataatctcacagcaggaaaggacaagggagaggtggggtgggttagtgttagtggtggaggggggtgtagggggaTAAT--T-------------------------ATAACCG--CA----TAATTAT-G-AAAAAAATTGAGA--C-------------A-----------A---TTAA-----------A-CA---ATATTTTCA-TG----TA-TACTTCCATATT-TATTCAAATGCAATGCCATTA--TC-----------T--------------T--------------GTTTAATGACAAGTTT------A----AAAATAGTGAATTTAACATTTT--------TTG-----------------AAT--AT-T---TTGTACCAGTCTAG------TATTA----AT-ACATGTTAG-ACTTCTGGT------------T-TAT---------------AT-TTTATGT-T---------TTT-TTA-----AATGTGGACGTAACAAATTAC------TCAATA-ATAC--T-AAA-A-ATGGCTTATTTACTGTGT-------------GGCAAACATAACATACAAAGCAAATAAGACA----TG-TTTAAAAC-TTCTTGTTCATATTGCAC-T-ACGTTCAAG-GTGAAATTTGACAT-AAA----------GAC-------------CGA----AAAGTTCGAG--AGAAA--C-T---T-TAGACGGGATCTGAA-AAGAAAAATAT-A-TTTT-----TTCT----GT-AC-TT-TGATATTAC---CC-ACACCTCTGTTTAAGATTTTAAtacacattatattatagacttgcagtgtatattgttgt
gi|19 : cATTTCTATATAACATT-AAACCCCATACAATTA--TCACATTTAATAGCAAG-----------C--------------AT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--TA----ATCAAAT-GAAG-TCTCGCGGT------------T-TAA---------CTA-AATG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAA---------TAC------ACAATA-ATACA-C-AAA-A-G-GGTTTATAAACTGCATTTATTTGAT----AGAAATCGTAAAATATAAAGCATGTAAGACA----TG-GTTAAAAC-TTCATGTGCTTTTTGCAC-T-TTGTTCAAG-ATGATAGTCATCAG-AAATACTGTTGTCGACTGGCCTTTGTTGACTATCGCAAAGTTTGGG--GGAAG--C-T---C-T-GACGAGACCTGAA-AAATATATT-T-T-TTTT-----ATAT----AT-AC-AT-TAGTATAAT---AT-GCACCCCTGTTT
gi|2 : ATTCATCAAAACCCTCAAAGTCATCTGCTT-----------CGATGTCGTTGTCA--------AGCAACGGTAACAGGTTCTCAACCCCTTCTC-ACCCACCAGGTTCTCAACACCTGC-TCAAACATGTCACTT-T---TGCCACT-----TGTCAAACGGTATCTGCACTCTTTTAATT----CAGGATCA--AAGAGATGTCACTTAATTTCAATTAACAGAGTGATAATCC-GACCACAGTAA------AGGACGA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGT------------GCC---CC-TGA------A-----CACC------TGCAC---A--ATTT---T---------TT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-ATTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--AG----TAATTGT-A-AAAA-------------------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----T----TTTTTTTATTTCATT-AAACCCCATACAATTA--TC-----------C--------------G--------------GT--------------------t
gi|24 : cagatgatattcaacaggtaggtactaaataaaacattctgttattagattagattatatgattccacaaagttgaaaactcttcaaatttaaaataattgagtgaaatcttataattactgtatttcccaagtataatccgcaggtgattttgaagccaaaaactggtggaaaaaaagctagcgtacgtctattatccacaggcataagttgtttactacatctgccattttgaaatctggaccaaaatgaaagattagttttgatatttttggagtaacaaaatctagactggtgtactgcatgattttgtaaaaaacgtaggtaaaacgttttgatgtgatataaagtgtgctaaagacaataaaatttgcgagtataaaatggtgttactgtaatttatgtgtatgtgtatttgggtaagtgcatcttttgagaaatattttggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattcagcagtctctgatgtctg--------------GT--------------------G----AAAATAGTGAATT-------AT--------TTG------------------------------TGTACCAGTCAAG------T--TAC---AT-AAAC---AG-ACTTCTGCTTTAAAGATCATGT-TAA---------CAA-ACAG-TTT-TGTCT--------ATTT-T-T-----CATTTGGAATTAATAAAATAC------ACAAAATATAC--TGAAA-A-T-GGTTTATAAACTTTGTTTATTGAAT----AGAAATCATAAAATATAAACCATATAAAACA----TG-TCTAAAACATTCAT-TGC--ATTGC-C-T---GTATACT-GTGAAAGTCCTGGGAAAATGCTttaatggcgagtataaaaat
gi|24 : AAAGTCCTGG--GAAAATGC-T---T-CAGACGGGACC-------ATA-----T-A-TATT-----TTCT----GTTGT-CTATAGTTTAAC---CT-GCACCCCTGTTTA--ATCTTAAAA--ACtcagacgggaccatatatattttctgttgtctatagtttaacctgcacccctgtttaatcttaaaaac
gi|25 : gtgaaaatagtgaattatttgtgtaccagtcaagttacataaacagacttctgctttaaagatcatgttaacaaacagttttgtctatttttcatttggaattaataaaatacacaaaatatactgaaaatggtttataaactttgtttattgaatagaaatcataaaatataaaccatataaaacatgtctaaaacattcattgcattgcctgtatactgtg----AAAATAGTCAATTGAACAGAAT--------TTG-----------------AAT--AT-TCTTTTGTTCCAGTCTAG------T--TA----CT----T----GTACTTTCAGT------------T-TAA---------------AT-TTTATGT-TTTATAAAAGTTTATCCTTATTCATTTTGAAGTTACAAAATAC------ACAAAA-ACAC--T-AAATA-T-GGTTTATAAAC-GTGTTTATT---T----A---ATC------TATAAA-CATATAAGACA-------------AC-TTCCTGTGCATATTGCAT-T-ACAT----GTATGTTCGCAGTGAA-AAATGTTG--------TAGCA------GACGATTGTAAAATTAAGG--GAAAA--CTT---T-T-GACGATACCTGAA-GAAAAAAA----A----------TTCT----AT-ACTCT-TAGT
gi|26 : tCCAGTTTCGG-CTTTAAAATCACCTGCGG--ATTA----TACTTGGGTGCGGTTTATAATG-GGAGATT-TACGGTA
gi|27 : atttaagttagattttataataaagtcactcttgaagcctcgtgaagtgatttttaaactttttttacattgacTACACCAGTCTAGATTTTGT--TACTCCAT-AAATAA--------CCAAT------------CATAATTG------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----AATTTGGAAGTTACAGAATAC------ACAAAA-ATATA-C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAGTATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTCAAG-tcgaaaaaagctaatatccgttcataatctgcaggcatgaatcagatgaatcagttgttaactacatctgccattttgacatccggaccaaagtgaaagatgaattttgattggctaattatggagtaacaaattt
gi|29 : ctcgcaaattttattgtctctaacacactatatatcacatcaaaactttttacctactttttttacgaaataatgcagATGTGAAAACAGCAAAATATGTGAAAACAGTA-A-------AAA-A-T-GGTTTA---ACAGTGTT-GTTAATTTTTTAGTTATCGTAAA-TATAAAACCTATAAGGCA----TG-TTTAAAAC-ATCCT-T-CATATT---C-T-TCATTTACG-GTAAAAATCGCCAG-AAATGCTGTTGT
gi|3 : tgtcttttttgttttggaagtagcaaaatGGAAGTTTTATTTTAATTTCAAATGCTATATTATATTTTGTTTA------------CATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-ATCAAAACCCTCATAACCATCTCCTTTGTTATCACTGC-----------CG--------AGCAACTATAACACGTTCTAAACCCCTTTTC-ACCAACGAGGTTCTGAACACCTAC-TCATTGGTGTCACTA-T---AGACACT-----TGTCAAACAGTATTTGTGCTTTTT-AATT----CAAGATCA--AAGAGATGCCAATTA----------ACAG--TGATATTCC-GACGGCAGTAA------AGGACAA---AGAA----GGTACAAGTGGG-CGGA--GTCA-------A-------------A-TAAGC------------GTT---GC-CGA------A-----CACA------TGCAC---A--ATTT---T--------GTT----C--TTCCGA--AGTTC---T------AAATTT-GTTTTGTGT-CA-TTTTTAATCAATAAACCGGTAATAAC--T-------------------------TT----T--CA----TAATTGT-A-AAAAAAA--GCAATAC-------------AT----------AATTGTAA----------AA--A---ATAGT--AA-TA----TA-TATTACATTAT--CATT-AAA----AGGCGAGT----------------------------------------------GT--------------------A----AAAACAGCAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTCAGACA----TG-TTTAAAAC-TTCATGTGCTTTTTGCAA-T-ACGTTCAAG-ATGATAGGCATCAG-AAATACTGTTCTTGACTGGCCTTTGTTGAGGATCACAGTGTTAGTA--GGAAA--C-T---C-T-GATGAAACCTGAA-AAATAGAAT-T-ATTTTT-----TTCT----AT-AC-CT-TAGTATAAT---AC-AGACCCCAGTTTTAGACTTTTAAA--ACTTG-GG--AAAA----AACT-----GCCGATAATAATC-ATAGATT-AACGGTAagtcgagcattaacttctgacggaacaaaatatatttttctgtactcctacctctttttttaataccttaaaact
gi|30 : ----AGAAATCATAAAATATAAAGCATGTGAGAAA----TG-TTTAAAAC-TTCCTGTGCTTTTTGCAC-T-ACGTTCAAG-ATTATAGTCATCAG-AAATACTGTTGCCGAATGGCCTTTGTTGATGATCACAAAGTTTTGG--GGAAA--C-C---C-T-GACAAGACATGAA-AAAAAAAAA-A-A-AAAA-----TTCT----AT-AC-AT-TAGTACAAC---AC-GCACCC--GTTTTAGACCTTAAAA--TCTTG-GA--AAAA----AACT-----GCAGATTATAATC-CTATTTT-TATGGTAa
gi|31 : CAGAAT--------TTG-----------------AAT--AT-T---T-GCAACAGTCTAG------T--TA----GT-AAATAGAAG-ACTTCCGGT------------G-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTCT----CATTTGGAAGTTACAGATTAT------ACAATA-ATAC--C-AAA-AAG-GGTTTATCAGCTGTGTTTATTAAAT----AGGAATCATTAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTC-----TGATAGTCATCAG-AAATACTGTTGTCCACTGGCCTTTGTTGAta
gi|33 : AATATAAAGCAAGTAAGACA----TGTTTTAAAAT-TTCC-GTGCTAATTGCAG-T-ACGTTCAAG-ATCACAATCGTCAG-AAATGCTGCTTTTGACC-GCCATTGTTGAC-ATCG-ATAGTTTGGG--GGAAA--CTT---C-C-GACTCTACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TG-TAGTAT---------GCACCCCTGTTTAAGACCTTAAAA--ACTTT-GG--A
gi|35 : C-GACAGCAGCAA------AGGACGA---GGAA----AGTACAAGTGGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---G--ATTT---T--------CTT----G--TTCCAA--ATTTT---T------AAATTC-GTTTTGTTT-TA-TTTCTAATCAATAAACTGATAACAAT--T-------------------------AT----A--CA----TAATTGT-A-AAAAAAAT-GAAATTCATAATTGTAAAAAAT----------A---GTAA----------TATCA---ATA-TTTCA-TA----TA-TAtttttttttaattgcagttcaacaaaacaaaaat
gi|36 : GGGAATTCTATTTTCATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCATCTCGTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCACTTCTC-ACCAACGAGGTTCT
gi|37 : GAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATC-AAACCCTCAAAATCATCTCCTT-----------C-----------CA--------AGCAACAACAGCACGTTCTAAACCCTTTCTC-ACCAACGA
gi|38 : TATTAAATT-AAACAC-ATACAATTACCTC-----------C--------------CTTCAAATGAAAAGTAT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-ATACCAGTTTAG------C--TAT---AT-TAATAGTA----TTCCAGT------------T-TAAAATTTATGTTGACAAAGATGT-TGT-C---------TTT-TCA-----CATTTAGAACCAACACAATAC------ACAA-----------AAA-T-T-GGTTTAAAAACT
gi|39 : TGATAATCT-GGCACCAGGAA------AGGATAATGTGGCA----GACTCAATTTGG---AA--ATTAGC-----A-------------A-TTTACT-----------GCTTTTGCATGATG----A-----CACT------TGTGC---A--TTTTAAAT--------TTT----GGTTGTCAAGGATTTT---T------AAATTTTGTTTTGTTT-TA-TTTTTAATCCATAAATTGAT-----T--T-------------------------AC----TAGCAATGGTAATTAT-A-AAAt
gi|4 : GTTTCCAACACCTAC-TCAAACATGTCACT-------------------------CAGTATTCGCACTCTTT-AAAT----GAAGATCA--AAGAGATGTTGATTAGTTTCAATTAACAGTGTTATAATCG-GACAGCAGGAA------AGGACCA---GGAA----AGGACAA-TGGG----A--GTCA-------ATTTTGTAAATGAAA-TTTACT-----------GCC---GC-CGA------AAATGACACCGTCC--TGTAC---A--ACACA--T--------CTT----T--T---AA--ATTTTGGTTGGCCAAAAATTT---TTTA-AT-TAGTTTTTCATCCATACATTAAT--TAACCGT-------------------------AT----T--CA----TAATTAT-A-GAAAATAT---AATTA-------------AG----------A----CAA----------TGCAA---GTGTTTCCA-TAATTATA-TGTTTCCATATTAAATT-GATCACCATACACTTG--CG-----------CTGTTTAATGACAAGC--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--ATAT---ATATACAAGTCTAG------T--TT----AT-AAAT---AG-ACTTCTGGT------------T-TAc
gi|4 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatATTTGGAAGTAATAAAATAC------AAAAAA-ATAC--T-AAA-A-ACAGTTTATAAACTtactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatatttggaagtaataaaatacaaaaaaatactaaaaacagtttataaacttggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|40 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatgtttccaacacctactcaaacatgtcactcagtattcgcactctttaaatgaagatcaaagagatgttgattagtttcaattaacagtgttataatcggacagcaggaaaggaccaggaaaggacaatgggagtcaattttgtaaatgaaatttactgccgccgaaaatgacaccgtcctgtacaacacatcttttaaattttggttggccaaaaattttttaattagtttttcatccatacattaattaaccgtattcataattatagaaaatataattaagacaatgcaagtgtttccataattatatgtttccatattaaattgatcaccatacacttgcgctgtttaatgacaagcgtaaaaatagtgaattgaacagaatttgaatatatatatacaagtctagtttataaatagacttctggtttatactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatTTGTAAAAGATTAAAATGTTTGGGAGGGAAA--A-TGTCC-T-GACTA--CCTGAACAAATAAAAT-CCA-TTTT-----GTCC----AT-AC-TC-TAGTTTAACCTAACTGTAACCCT--TTAGGAC--TAAAA--ACTTA-AA--AAAAGAAAAACT-----GCCGGTTATAtggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|42 : taccggaaatgctgGTTGATGACTGAAAAGTTTGGG--AGAAA--C-T---TAC-AACGA------------TAAAATAT-A-TTTT-----TCCT----AT-AA-TC-TGATATTGC---CC-GCACCCTTGTTTGAGACCTTAAAAT-GTCTG-GGGCAAAA----AAC------ATGGGTTATAGTCTGCAGATT-
gi|43 : A---ATATTTAAAATA----TA-GATGTCCATATCGGATT-AAGTACTATAAAATCA--TC-----------C--------------T--------------TTTTAATGACA-----------AGTTTAAAATAGTGAATTGAACAGAAT--------TTG-----------------AATAAAC-T---TTGTTTCAGTagggttacagatg
gi|44 : aaaagaggacaataattacaaaa--------------C--------------GT--------------------A----AAAATAATAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTAAAAGTTACAGAATAC------ACAATag
gi|45 : gagGATCAGAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--AA----AT-AAATTGAAG-ACTTCCAGT------------T-CAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACTATA-ATACA-C-AAA-A-C-GGTTTATAAAta
gi|46 : CACG-GTGAAATTCACCAG-AAATGCTAT----G----------GTTGATGATCGAAAAGTTCGGA--AGAAA--T-G---A-T-GTCGGGATCTGAA-TAGTTAGATAT-A-TTTTTGATATTCTAATGAT-AC-CT-TA
gi|47 : TTCTCAACATCTAC-TCAAACGTGTCACAA-T---TGCCACT-----TGTCAGATGGTATTCACACTCTTT-AATT----C---------AAGAGATGTCAATTA--TTAAAT-------GTGATAATCG-GACaaaaatttaagaaaa
gi|5 : CCTCTTCTT---CGACA--GTTCTCATTGCCTAC-TCAAACATATCACTA-TATTTGTCCCT-----TATCAAACGGTATTCACACTCTGT-AATT----GAAGATGATGAAGAGATGTCGGTTAGTTTCAATTAACAGAATGATAATCT-GACAGCAGGAA------ATGACTA---GAAA----AGTACCAGTGGG-CGGA--GTCA-------ATTTTGTA------A-TTGGCTTGCAATTTACTGCC---AC-AAA------A-----CATC------TGCCC---A--ATTT---T--------GTT----G--TCCCAG--ATCTT---T------AAATTT-GTTCTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--TATTCATAATTATAAAAAAATTGTAAAT----T--CA----TAATTGT-A-AAAAATAT-TAA-TTA-------------AG----------A----CAA----------TATAA---ATATTTTCAATA----TA-TATTTCTTTATTACATT-AAACACTATATAATTG--TC-----------T--------------C--------------ATTTAATGACGAGCAA------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TA----AT-A----GCAG-ATTTCTGGT------------T-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC------ATTTGGAAGTAACAGAATGC------ACAATA-ATAC--C-AAAGA-GTGGTTTATAAACTATGTTTATTAAAT----AGAAATCATAAAATATAAAATATGTAAGACA----TT-TTTATAAT-TTCCTGTGCTTATTGCAC-T-TTGTACAAG-ATGGTAACCGTCAG-AAATGCTG--------------TTGTTGATGATCGCAAAGTTTGGG--AGAAA--C-T---C-A-GGCAAGACCTGAA-AAATATAAT-T-A-ATTT-----TTCT----AT-AC-AC-TAGTATGAT---AG-GTACCCCAGTTTTA
gi|53 : cacgtcGGTTCTGAACACCTAC-ATACAAGTGTCACTA-T---TGA-ACT-----GGACAAATGGTATTCGCGCTTTTT-AATT----CAAGag
gi|54 : A-TATTTCCATATTAAATT-AAATACCATACAATTA--TC-----------C--------------T--------------GT--------------------
gi|55 : GGAATTTGCTATCTTT-AATT----GAAGATCA--AAGAGATGCCAGTTAGTTttgatgaca
gi|57 : agGGAAATTTTATTTTAATTTCAAATGCTATAT-ATA
gi|6 : CCACT--------CAA---GTATTTATGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTTAATTAACAGGGTGATAATCC-AACAGCAGTAACTGTTAAGGACAA---AGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------ATT---GC-CGA------A-----CACC------TGCAC---A--GTTT---T--------GTT----G--TCCCAA--AGTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATGAT--T-------------------------AT----T--CA----TAATTGT-T-AAAACAAT-GAAATTC-------------ATAATTGTTAAAA---GTAG----------TATTAGCTATATTTTCA-TA----TA-TAATTCTTTATTACATT-AAACACCATACAATTA--TC-----------CTGTTTAATGGCGAGC--------------GT--------------------G----AAAATAGTAAATTTATCAGAAT--------TTA-----------------AAT--A--T---TTGCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCGGGT------------T-TAG---------CGA-AAAG-TGT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-GTAC--C-AAA-AGG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----CG-TTTATAAC-TTTGTGTGCTTTTCGCAC-T-ATGTTCAAG-ATGATA--------------CTGTTCTCGACTGGATTTTGTTGGCGATCCCGAAGTTTGGG--GGAAA--C-T---C-C-GATAAGACCTGAA-AAA-AAAA----A-TTTT-----T--T----AT-AC-CT-TAGTATAAT---AC-GCACCCCTGTTTTGGACCTTAAAA--ACTTG-GG---GAA----AACT-----ACGGATTATAATC-ATATTTT-TACGGTAc
gi|7 : caaacCATCAACACTCTCAAAGTCATCTCCTT-----------C-----------
gi|8 : gcatgtaatttatgcacaaatggtttaacacacaggcactggtcacaatttttttttttagtatatttggtcatatagtatctatatagtagactggtcacaaactctttttttagtatattaaaattatggtcatgtagtaccgtattttcccaattataatctttactcaagtataatccgctggtgattttgaaagcaaaactggtgggaaaaagatagtatacatctattatctgcaggcatgaatcaattgtttacctcatccgccattttgaaattcagaccaaagtgaaagaagaatttggattggttcttcatggcgtaacaaaatcaatactggtgtactgcataattttgtaaaaaaacgtaggtgaaatgttttgatgtgatatatagtgtgttggagacaataaaatttgtgaatataaaatggtgttaccataattacttttatgtgtatttgggtaagaaaaagtgaaaataaaaacaaactattgacaatttttttaaatgcatctttcgagaaatatttggaccatcaccctttcactgtaattgcatcattcagcagtctctaatgtccgatgAATGATAACAAGTTCTAAACACCTTCTC-Aaatgacgctgtcc
gi|8 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttAAGTTCTAAACACCTTC-TCAAACGTGACACAA-T---TGTCAAG-----CACCAATTGGTATTC-TACTCTTT-AATT----GAAGATAA--AATAGAT---AATAAGTTTCAATTAACAGCGTG----TCCTG-----AGGAA------AGGACAA---GGAGGCTTAGT-CAATTTTG-T-AATTGTCATGG----A-------------ACTTCTT------------GTC---GC-CAAACAATGA-----CACC------TGTACATAA--ACTT---TAAATTATGTTT----G--TCTT-A--GTCTT---T------AAACTT-GTTTTGAG---A-TTTTTAATCCTTAAACTCAT-----T--T-------------------------AT----T--CA----TATTTAT-ATATAAAAA---AAATCC-------------------------A---ACAA----------TACAA---ATATTTCCA-T--------------TTTA----ATT-AAACACCATACACTGA--TC-----------CCATTTAATGATAAAC--------------GT--------------------A----AAAATAGACAAATGAACAGAAT--------TTG-----------------AAT--AT-aacgtgacacaattgtcaagcaccaattggtattctactctttaattgaagataaaatagataataagtttcaattaacagcgtgtcctgaggaaaggacaaggaggcttagtcaattttgtaattgtcatggaacttcttgtcgccaaacaatgacacctgtacataaactttaaattatgtttgtcttagtctttaaacttgttttgagatttttaatccttaaactcatttattcatatttatatataaaaaaaatccaacaatacaaatatttccattttaattaaacaccatacactgatcccatttaatgataaacgtaaaaatagacaaatgaacagaatttgaatatgtgta
gi|9 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttaatgataacACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------GATGTTGCTGAGCAACAAGAATACATTCTAAACCCCTTCTC-ACCGGCAAGGTTCTCAACATCTAC-TCAAACGCGTCACTA-C---TGCCACC-----TGTCAAACGGTACTCCCACTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGAAAAACT-GACATCAGTA------------AA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------GCC---AC-TGA------A-----CACC------TGCAT---C--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TT-TTTTTAATCAATAAACAGAAAATAAT--T-------------------------AT----T--TA----TAACTGT---AAAAAAAT-GAAATTC-------------AT----------A---ATgtgta
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATTTACCTTTATGTATATTCATTAAATTTTGATACTGCTTTACCTATTTTTGTCAGAGTTGAACTTAATACAGTATATCTCCAGTTATATTCCGCACTGGAGTATAATCTGCAGGTTATTTTGAAGCCAAAACTAGTGGAAAAAAGCAAGTATACGTTTATTATCCGTAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGACAAAAGTGAAAGATGAATTTTGATTGGTTATTTATTGAGTAACAAAATCTAGACTGGTGTACCGCTTAATTTTGTAAAAAACTTCGGTAAAACATTTTGATGTGATATATAGTGTGTTAGTGACATAAAACTTGCGACTATAAAATGGTGTTATTGAAATATCTTTATGTGTATTTGG
Unaligned ( gi|21 ): TCCTGATGCTTCTTCTAAAATGGTTATACCAAAATAGTTTTTTGCAAATTGGGGTACCGTATATCGCCAATTATAAACCGCACCCAAGTATAATCCGCAGGTGATTTTGAAGCCGAAACTGGTCGAAAAAAGCTAGTATCCGTCTATAATCCGCAGGCATGAATCAGCTGAACCAGCTGTTTACTACATCTGCCATTTTGAAATCCAGACCAAAGTGAAAGATGAATTTTGATTGGCTTATTATGGAGTAACAAAATCTAGACTGGTGTACTGCATTACTTTGTAAAAACATAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGAAAATTTGCGAGTACCAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGGG
Unaligned ( gi|22 ): TGACCCTAATTTTACTCTATTTCCAAAGTATAATCCGCACTTGAGTATAATCCGCAGGTGATTTTGAAGTGAAAACTAGTGGAAAATTGCTAGTATACATCTATTATCTGCAGGCATGATTCAGTTGTTTACTACTTCTGCAATTTTGAAATCCTTACCAAAGTGAAAGATCAATTTTGATTGGTTATTCATGGAGTAACACAATCTAGACTGGTGTGCTGCATGATTTTGTCAAAAACGTAGGTAAAATATTTTGATGTGATATATATAGAGTGTACTTCAAAATCCCTATGGCTCAAAAATGACATGGTACTCAAAATCCCCTTGATGGGTGGCAT
Unaligned ( gi|23 ): AATCTCCAAGTATAAACCACACCCAAGTATAATCTGCAGGTGATTTTGAAGCCAAAACTGGTCGAAAAAAGCTAGTATCTGTCCATAATCCGCAGGCATGAATCAGATGAATCAGCTGTTTACCACATCCATCATTTTGAAATCCCAACCAAAGTGAAAGATGAATTTTGATTGGCTAATTATTGAGTAACGAAATCGAGACTGGTGTACTGCATAACTTTGTAAAAACGTAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGGAGACAATAAAACTTGCAAGTATAAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGG
Unaligned ( gi|28 ): ATTTATGTTTATTTATAGGTTATTTATTCCTGGTCATATTTTTTTTGTTTTTAAAGGGAATATACCATAAATCTCCTATTATAAACCGCACTCAAGTATAATCCGCAGGTGATTTTGAAATCGAAACTGGTCGAAAAAAGCTTGTATACGTCTATAATCCGCAGGCATGAATCAGATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGATCAAAGTGAAAGATAATTTTTGATTGGCTAATTATTGAGTAACAAAATCTAGACT
Unaligned ( gi|32 ): ACTACCGTAATCGTTTGATTATACCCCTTTGCCAAGTATAACCTGCAGGCTAATTTTGAAGCCAAAACTTGTGAAAAAAAAACTTATATCCATGAATAATACGCAGTTGTTTACTACTGCCGCCATTTTGAAATCGAAAGACAAATTTTGATTGGCTAGATTTTAAGTCACATAATCTAGACTGGCATACTGTTAATTTTGTAAAATCACATGTGATAACTACTATTAAATATTTTGTGTAA
Unaligned ( gi|34 ): TTTTAATTTAGACTTTATGTCATACTTTTGACAAATAACCACAGACCCTGGACTTTTGATTTTAACATACAGTAATCTTCCAATTATAACATGCCACCAAGTATACCCCGCATGCTGATTTTGAAGACAAAATTGGTGGAAAAAAGTAAATATATATCAATTATACACAGCCATTATATCTTCAAATCCAAATCTGTTCGCCATTTTGA
Unaligned ( gi|41 ): CTTTGATCTCTCGAATAAAAGTCTCCTCAGAGTATCACAGACTGATTTTGTATCCAAATCTGGTGGAAACATAGCTCTTGTATCCTGGCATATCACACAGCATGAAATTGAGAGTTTACCATGGCCACCATTTTAAAATCAATACAAAAG
Unaligned ( gi|48 ): ATGCAATTCAGTCTTTATTCATGTTCAATTAGTTATATAAAAAAAATTAGATATGCGTACACTCAACTAGTATTTACTGTTGATTGTTACTACCAT
Unaligned ( gi|49 ): GACTATTGCTTATTTTTTTATAAAAATATACCGTAATATTGCAAATATAAGACACCCCAAAGTATCACCTGCAGGCTGATTTTGAGGCAAAGATAA
Unaligned ( gi|50 ): ACTATTGGATAAAATATAGGTAAAACATTTTGATGTGATATATAGTATGTTAGAGACAATAAAACTTGCGAGTATAAAATGGTGTTACCGA
Unaligned ( gi|51 ): GCAGTTCAGCAAAACAAATGCGAGTTGAAAATATTTGCATAGGTTAAAAAAAGCCAGTGGATTAAAAAGTTAAAATTCTACCCCTG
Unaligned ( gi|52 ): ACTACAGTATTTCGCAAATTATAATCTGCACTCGAGTACAATCTGCAGGTGCTTTTGGAGCCAAAACTATTGGATAAAAT
Unaligned ( gi|56 ): AAATCCCCATGGCTCAAAAATGACAAAGTAGTCAAAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 555555555555555555555555555555555555555555555555555555555 1 666666666666666666666666666666666 4444444444444444444444444444444444444444 111111 111111 1111111111111 2222222222222222222222222 333333333333333333333333333333 11111111111 222222222222222222222222222222222222222222222222222222222222222 11111111111111111 1 1111 111111111111 1111111111 111111111 1111 222 111111111 11111
lowQualScore : 8 3 888 777777777777777777777777777777777777777777777777777777777 0 999999999999999999999999999999999 4 8 1 3 3 555 1 77777 0 0 2 6666 44 1 3 5 1 888888 555 6666 777 44 0000000000000000000000000000000000000000 555 3 333333 77777 555555 555555 6666666666666 6666 44 0 44 555 888888 3 3 3 2 33 6666666666666666666666666 5555 33 5555 555 888 666666666666666666666666666666 66666666666 55 555 6 6666 2 2 999 2 0 33 777777777777777777777777777777777777777777777777777777777777777 5555 77777777 44444444444444444 44 4 333 7 666666 22 2222 2 8 1 2 111111111111 2 6666666666 2 4 4 2 111111111 2 0 88888 1 666666 2 2222 4 000 0 5555 5555 2 2 2 1 2 2 2 2 0 0 1 2 1 888 66 4 0 6 33 33 666666666 1 3 2 2 7 2 2 55555 5555 2 4444 444 2 1 77 3 44 7777 11111 1 5 22 5
lowQualScore : . . ... ......................................................... . ................................. . . . . . ... . ..... . . . .... .. . . . . ...... ... .... ... .. ........................................ ... . ...... ..... ...... ...... ............. .... .. . .. ... ...... . . . . .. ......................... .... .. .... ... ... .............................. ........... .. ... . .... . . ... . . .. ............................................................... .... ........ ................. .. . ... . ...... .. .... . . . . ............ . .......... . . . . ......... . . ..... . ...... . .... . ... . .... .... . . . . . . . . . . . . . ... .. . . . .. .. ......... . . . . . . . ..... .... . .... ... . . .. . .. .... ..... . . .. .
lowQualScore : 0 2 222 000000000000000000000000000000000000000000000000000000000 0 111111111111111111111111111111111 0 2 9 6 3 888 4 77777 6 9 9 1111 22 8 5 7 0 888888 444 5555 000 22 3333333333333333333333333333333333333333 444 1 111111 77777 444444 555555 5555555555555 5555 22 2 22 444 888888 1 1 1 6 77 7777777777777777777777777 7777 77 7777 000 888 444444444444444444444444444444 00000000000 44 444 2 5555 9 0 666 7 5 44 666666666666666666666666666666666666666666666666666666666666666 0000 22222222 00000000000000000 88 0 777 9 111111 99 9999 2 4 9 2 444444444444 2 1111111111 4 7 7 4 222222222 4 1 22222 7 111111 2 3333 4 555 3 3333 0000 4 4 2 0 4 4 1 2 3 2 9 4 4 777 55 1 9 6 22 22 444444444 6 6 4 4 1 4 4 99999 0000 4 1111 777 7 0 33 3 66 7777 11111 0 0 00 0
consensus : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
Reference ( family-188 ) : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
gi|1 : GGAAATTTTATTTTAATTTCAAATG----AT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCGTCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCAACGAGGTTCTAAACACCTACATC-CACGTGTCACTA-T---TGACACT-----TGTCAAACGGTATTCGCGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTACTTTCAATTAACAGAGTGATAATCC-GACAGCAGTAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GT-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCGA--ATTTT---T------TAATTT-GTTTGGTAA-TA-TTCTTAATCAATCAACTGATAATAAT--T-------------------------AT----T--CA----TCAGTGT-T-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACCCCATACAATTA--TC-----------C--------------T--------------GT--------------------A----AAAATAGTGAATTGAACAGATG--------TTG-----------------AATA-ATAT---TTGTACCAGTCTAG------T--TA----AT-AAATTGATG-ACTTCCGGT------------T-TAG---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATACATC--AA-A-G-GGTTTGTAAACTACGTTTATTTAAT----ATAAATAATAAAATATAAAGCATGTTAGACA----TG-TTTAAAAC-TTTGTGTGCTTTTTGCAC-T-ACGTTCAGG-ATGATAGGCATCAG-AAATACTGTTCTCGACTGGCCTTTGTTGACGATCGCAAAGTTAGCG--GGAAA--C-T---G-G-GATGAAACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AA-CA-TACTATAAA---CC-GCACCCCTGTTTCAGACCTTAAAA--AACTG-GG--AAAA----AACT-----GCGGTTTTTAATT-GGTTATT-TACGGTA
gi|10 : AA----------AATGA---ATTTTATCC-TA----TAATA---CTTTAT-------AAACACCATACAGTTA--TC-----------C--------------C--------------GTTTACCGGTAATGACAAGCGTA----AAAATAATAAATGGAACAGAAT--------TCA-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TAT---AA-AAATAGAAG-ACTTCCGGT------------T-TAA----------GA-GAAG--TT-TGT-T--------TTTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAAC-TTTACATGCTTAATGCAC-T-AGGTTCAAG-ATCACAGTCGTTAG-AAATGTTGCTTT-GACC-GCCATTGTTGAC-ATCG-ATAGTTTGGA--GGAAA--CTT---C-C-GAC--TACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-TC-TC-TAGTATAAC---AC-GCATTCTTGTTTAAGATCTTAAAA--ACTTA-GG--AAAA----AA
gi|11 : atgtgtaaaaaccagaaTAATTAATAA--CAAAAATAAT--T-------------------------GT----T--CA----TAATTGT-A-AAAAAA-T-GAAATTC-------------AT----------AATTGTAAAAAATAGTTATATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACATCATACAATTA--TC-----------C--------------C--------------GTTTAATGGCGAGCGT------A----AAAATATTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCGCCAGTCAAG------T--TA----AT-AAGTAGAAG-ACTTCTGGT------------T-TAA---------CAA-AAAG-TTT-TAT-T--------GT--------------------GTTGCAGAATAC------ACAATT-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACATGTTTG-TTTAAAAC-TTTGTGTGCTTTTTGCGCGTAACGTTCAAG-ATGATAGTAATCAG-AAATACTGTTGTTGACTGGCCTTTGTTGATGATCGCAAATTTTGGG--GGAAA--C-T-------GATGAGACCTGAA-AAATAATTT-T-T-TTTT-----ATCT----AT-AC-AT-TAGTATAAT---AC-GCACCCCTGTTTTCGACCTTAAAA--A-TTG-GG--AAAA----AACT-----GCGGCTTATAATC-ATAGTTT-TATGGTAaatttttgtagttcaaccaaacaaaaatgcgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaagttaaattctacccctgt
gi|12 : ACTCATCAAAATC-TCAAAATCATCTCCTTAGATGTCGCTGT-----------CA--------AGCAACAATAACACGTTTTCAACCCCTTCTCGACC-ACCAAGTTCTCAACACCTAT-TCAAAGGTGTCACTG-T---TACCACTGCCACTATCACATGGTATTCCCACTCTTT-AATTCTGACAGCAGCA--AAG-GATG
gi|12 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctTAATTCTGACAGCAGCAA------AGGATGA---GAAA----AGTACAAGTTGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CCA------A-----CACC------TGCAC---A--ATTT---T--------CAT----G--TCCCAA--ATTTT---T------TAATTC-GTTTTGTGT-TA-TTTTTAATCAAGTAACTGATAATAAT--T-------------------------AT----T--CA----TAATagaaaagtacaagttggcggagttaaattggcgccgcccaacacctgcacaattttcatgtcccaaattttttaattcgttttgtgttatttttaatcaagtaactgataataattattcataat
gi|13 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactcttACTCATTAAACCTCTCAAAGTCATCTTCTT-----------
gi|14 : ccgcaggtaaagttgaagccaaaactggtcgaagaaagctattgaacatctattatccgcaggcatgaatcagttgtttactacatccgccattttgaaatccgaaccaaagtgaagtattttgattggctaattatggagtaacgaaatcaagactagtgaactgcataactttgtaaaaacgtaggtaaaaagttttgacgtgatatatagcatgttagaaacaataaaatttgcaagtataatgtggtgttactattttttatgtgtatttgggtaagacaaaagggaaaatacaaacaaactattgacaatttttttatgtccattttgtgcagaacatttgggtcctaaagaggaccatcaccctctcactgtatctgcatcattcagctgtctctgatgtcagACTCATCAAAACTCTTTAAGTCATTTCCTT-----------CAATGT------CC--------AGCAACAATAACATATTCTCACCTCCTTCTC-ACCCACCAGGTTCTCAACACTTAC-CCAAACGTGTCACTATT---TGCCACT-----TGTCAAACAGTATTCGCACTCTTT-AATT----CAAGATCA--AGGAGATGTCAA-TAGTTTCAACTAACAGAGTGGTAATCC-GACTGTAGCAA------AGGACAA---GGAA----AGTACAAGTGGG-C--A--GTCA-------A-------------A-TTTGT------------GCT---GC-CAA------A-----CA------------------------------------------------CAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TGTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGTAA-AAAAAAAT-GAAATTC-------------AT----------A---ATtgacatcgctgtcgaacagatgccgaaactgttcgtca
gi|15 : aagataaaagggaaaattaaaacaaactattgacaattttttaagtgcatctcaatagaaatatttgggtcctaaaaaggggcaatcaccctctcaatgtatctgcatcattcagcagtctctgatgtccgAATGGAACAAAAT--------TGG-----------------AAT--AT-T---T-GCACCAATCTAG------T--TAT---AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-GAAGTTTT-TGT-T---------TTT-TTT-----CATTTGGAAGTAAAAGAATAC------ACAATA-ATAC--T-AAA-A-ATGGATTATAAACTGTGTTTATTAAAT----AAAAATCATAAAATATAAAGCATGTAAGACA----TA-TTTTAAGC-TTTTTGTGCTTATTGCTC-T-ATGTTCA---------------AG-AAATGCTGCTTTTGAC-AGCTGTTGTTGAC-ATCG-ATAATTTGGG--GGGAA--CTT---C-T-GAC--TACCTTAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TC-TAGTATAAC---AC-GCATCTCTGTTTAAGACCTTAAAA--ACTTA-GG--AAAA----AA
gi|16 : aaATACAATTA--TC-----------CAGGTTAAAAGCAAGT--------------GT--------------------A----AAAATAGTGAATTGAACAAAATTAGAATATTTGTACCANNNNNNNNNNAGAAT--AT-T---T-GTACCAGTCTAG------T--TA----AT-AAATTTAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------TTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAAT--ATACA-C-AAA-A-G-GGTTATTAAACTGTGTTTATTAAAT----AGAAATCATAAAATTTAAAGCATGTAAGACA----TG-TTTAAAAT-TTCCTGTGTTTGTTGCAT-A-ACGTTCAGG-ATGATAGTCATCAG-AAATACTGTTGCTGACTGGCCT---ATGACGAACGCAAAGTATGGA--AGAAA--C-T---C-T-GATGAGACCAGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-AT-TAGTATAAT---AC-GCACACCTGTTTTAGAGCTTAAAA--GCTTG-GG--AAAA----AATT-----GCAGATTATAATC-GTATTTTATACTGTattttttttgcaattcaaccaaacaaaaatgtgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaaaaaagttaaattctaaccctggca
gi|17 : caAAACATGTTAGTA-T---TGTCAAG-----TATGGAAGGGAATTTGCGCTCTTT-AATT----GAAGATCA--A-GAGAT--CAATTAGTTTCAATTAGTGCACTTATAATCT-CACAGCAGGAA------AGGACAA---GGGA----G----AGGTGGG-
gi|17 : tTGGGTCGGA--GTCAGTTTTGTA-------------A-TTGGCATGCAATTAACAGCC---GC-CAA------A-----CATTGACAAATGCAC---ATAACTT---T--------CTTTTTTG--TCATAG--AGTTT---T------AAATTT-G-TTTATGTAAA-TTTTCAATCCATAAACTGTTGTT--T--T-------------------------TT----T--CA----TAGCTAT-A-AAAAAAA-------TC-------------TT----------A--------------------CA---ATATTTACA-TA----TA-TAT-----------ATT-TAATG----ACAA------------------C--------------C--------------AT--------------------A----AAAATAGTGAATTGATCAGGAT--------TTA-----------------AAT--A--T---TTGTACCAGTCTAG------T--TA----gtgggttagtgttagtggtggaggggggtgtagggggatgggtcggagtcagttttgtaattggcatgcaattaacagccgccaaacattgacaaatgcacataactttcttttttgtcatagagttttaaatttgtttatgtaaattttcaatccataaactgttgtttttttcatagctataaaaaaaatcttacaatatttacatatatatatttaatgacaaccataaaaatagtgaattgatcaggatttaaatatttgtaccagtctagttatacacattatattatagacttgcagtgtatattgttgt
gi|18 : taaacatgttagtattgtcaagtatggaagggaatttgcgctctttaattgaagatcaagagatcaattagtttcaattagtgcacttataatctcacagcaggaaaggacaagggagaggtggggtgggttagtgttagtggtggaggggggtgtagggggaTAAT--T-------------------------ATAACCG--CA----TAATTAT-G-AAAAAAATTGAGA--C-------------A-----------A---TTAA-----------A-CA---ATATTTTCA-TG----TA-TACTTCCATATT-TATTCAAATGCAATGCCATTA--TC-----------T--------------T--------------GTTTAATGACAAGTTT------A----AAAATAGTGAATTTAACATTTT--------TTG-----------------AAT--AT-T---TTGTACCAGTCTAG------TATTA----AT-ACATGTTAG-ACTTCTGGT------------T-TAT---------------AT-TTTATGT-T---------TTT-TTA-----AATGTGGACGTAACAAATTAC------TCAATA-ATAC--T-AAA-A-ATGGCTTATTTACTGTGT-------------GGCAAACATAACATACAAAGCAAATAAGACA----TG-TTTAAAAC-TTCTTGTTCATATTGCAC-T-ACGTTCAAG-GTGAAATTTGACAT-AAA----------GAC-------------CGA----AAAGTTCGAG--AGAAA--C-T---T-TAGACGGGATCTGAA-AAGAAAAATAT-A-TTTT-----TTCT----GT-AC-TT-TGATATTAC---CC-ACACCTCTGTTTAAGATTTTAAtacacattatattatagacttgcagtgtatattgttgt
gi|19 : cATTTCTATATAACATT-AAACCCCATACAATTA--TCACATTTAATAGCAAG-----------C--------------AT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--TA----ATCAAAT-GAAG-TCTCGCGGT------------T-TAA---------CTA-AATG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAA---------TAC------ACAATA-ATACA-C-AAA-A-G-GGTTTATAAACTGCATTTATTTGAT----AGAAATCGTAAAATATAAAGCATGTAAGACA----TG-GTTAAAAC-TTCATGTGCTTTTTGCAC-T-TTGTTCAAG-ATGATAGTCATCAG-AAATACTGTTGTCGACTGGCCTTTGTTGACTATCGCAAAGTTTGGG--GGAAG--C-T---C-T-GACGAGACCTGAA-AAATATATT-T-T-TTTT-----ATAT----AT-AC-AT-TAGTATAAT---AT-GCACCCCTGTTT
gi|2 : ATTCATCAAAACCCTCAAAGTCATCTGCTT-----------CGATGTCGTTGTCA--------AGCAACGGTAACAGGTTCTCAACCCCTTCTC-ACCCACCAGGTTCTCAACACCTGC-TCAAACATGTCACTT-T---TGCCACT-----TGTCAAACGGTATCTGCACTCTTTTAATT----CAGGATCA--AAGAGATGTCACTTAATTTCAATTAACAGAGTGATAATCC-GACCACAGTAA------AGGACGA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGT------------GCC---CC-TGA------A-----CACC------TGCAC---A--ATTT---T---------TT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-ATTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--AG----TAATTGT-A-AAAA-------------------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----T----TTTTTTTATTTCATT-AAACCCCATACAATTA--TC-----------C--------------G--------------GT--------------------t
gi|24 : cagatgatattcaacaggtaggtactaaataaaacattctgttattagattagattatatgattccacaaagttgaaaactcttcaaatttaaaataattgagtgaaatcttataattactgtatttcccaagtataatccgcaggtgattttgaagccaaaaactggtggaaaaaaagctagcgtacgtctattatccacaggcataagttgtttactacatctgccattttgaaatctggaccaaaatgaaagattagttttgatatttttggagtaacaaaatctagactggtgtactgcatgattttgtaaaaaacgtaggtaaaacgttttgatgtgatataaagtgtgctaaagacaataaaatttgcgagtataaaatggtgttactgtaatttatgtgtatgtgtatttgggtaagtgcatcttttgagaaatattttggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattcagcagtctctgatgtctg--------------GT--------------------G----AAAATAGTGAATT-------AT--------TTG------------------------------TGTACCAGTCAAG------T--TAC---AT-AAAC---AG-ACTTCTGCTTTAAAGATCATGT-TAA---------CAA-ACAG-TTT-TGTCT--------ATTT-T-T-----CATTTGGAATTAATAAAATAC------ACAAAATATAC--TGAAA-A-T-GGTTTATAAACTTTGTTTATTGAAT----AGAAATCATAAAATATAAACCATATAAAACA----TG-TCTAAAACATTCAT-TGC--ATTGC-C-T---GTATACT-GTGAAAGTCCTGGGAAAATGCTttaatggcgagtataaaaat
gi|24 : AAAGTCCTGG--GAAAATGC-T---T-CAGACGGGACC-------ATA-----T-A-TATT-----TTCT----GTTGT-CTATAGTTTAAC---CT-GCACCCCTGTTTA--ATCTTAAAA--ACtcagacgggaccatatatattttctgttgtctatagtttaacctgcacccctgtttaatcttaaaaac
gi|25 : gtgaaaatagtgaattatttgtgtaccagtcaagttacataaacagacttctgctttaaagatcatgttaacaaacagttttgtctatttttcatttggaattaataaaatacacaaaatatactgaaaatggtttataaactttgtttattgaatagaaatcataaaatataaaccatataaaacatgtctaaaacattcattgcattgcctgtatactgtg----AAAATAGTCAATTGAACAGAAT--------TTG-----------------AAT--AT-TCTTTTGTTCCAGTCTAG------T--TA----CT----T----GTACTTTCAGT------------T-TAA---------------AT-TTTATGT-TTTATAAAAGTTTATCCTTATTCATTTTGAAGTTACAAAATAC------ACAAAA-ACAC--T-AAATA-T-GGTTTATAAAC-GTGTTTATT---T----A---ATC------TATAAA-CATATAAGACA-------------AC-TTCCTGTGCATATTGCAT-T-ACAT----GTATGTTCGCAGTGAA-AAATGTTG--------TAGCA------GACGATTGTAAAATTAAGG--GAAAA--CTT---T-T-GACGATACCTGAA-GAAAAAAA----A----------TTCT----AT-ACTCT-TAGT
gi|26 : tCCAGTTTCGG-CTTTAAAATCACCTGCGG--ATTA----TACTTGGGTGCGGTTTATAATG-GGAGATT-TACGGTA
gi|27 : atttaagttagattttataataaagtcactcttgaagcctcgtgaagtgatttttaaactttttttacattgacTACACCAGTCTAGATTTTGT--TACTCCAT-AAATAA--------CCAAT------------CATAATTG------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----AATTTGGAAGTTACAGAATAC------ACAAAA-ATATA-C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAGTATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTCAAG-tcgaaaaaagctaatatccgttcataatctgcaggcatgaatcagatgaatcagttgttaactacatctgccattttgacatccggaccaaagtgaaagatgaattttgattggctaattatggagtaacaaattt
gi|29 : ctcgcaaattttattgtctctaacacactatatatcacatcaaaactttttacctactttttttacgaaataatgcagATGTGAAAACAGCAAAATATGTGAAAACAGTA-A-------AAA-A-T-GGTTTA---ACAGTGTT-GTTAATTTTTTAGTTATCGTAAA-TATAAAACCTATAAGGCA----TG-TTTAAAAC-ATCCT-T-CATATT---C-T-TCATTTACG-GTAAAAATCGCCAG-AAATGCTGTTGT
gi|3 : tgtcttttttgttttggaagtagcaaaatGGAAGTTTTATTTTAATTTCAAATGCTATATTATATTTTGTTTA------------CATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-ATCAAAACCCTCATAACCATCTCCTTTGTTATCACTGC-----------CG--------AGCAACTATAACACGTTCTAAACCCCTTTTC-ACCAACGAGGTTCTGAACACCTAC-TCATTGGTGTCACTA-T---AGACACT-----TGTCAAACAGTATTTGTGCTTTTT-AATT----CAAGATCA--AAGAGATGCCAATTA----------ACAG--TGATATTCC-GACGGCAGTAA------AGGACAA---AGAA----GGTACAAGTGGG-CGGA--GTCA-------A-------------A-TAAGC------------GTT---GC-CGA------A-----CACA------TGCAC---A--ATTT---T--------GTT----C--TTCCGA--AGTTC---T------AAATTT-GTTTTGTGT-CA-TTTTTAATCAATAAACCGGTAATAAC--T-------------------------TT----T--CA----TAATTGT-A-AAAAAAA--GCAATAC-------------AT----------AATTGTAA----------AA--A---ATAGT--AA-TA----TA-TATTACATTAT--CATT-AAA----AGGCGAGT----------------------------------------------GT--------------------A----AAAACAGCAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC-----CATTTGGAAGTTACAGAATAC------ACAATA-ATAC--C-AAA-AAG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTCAGACA----TG-TTTAAAAC-TTCATGTGCTTTTTGCAA-T-ACGTTCAAG-ATGATAGGCATCAG-AAATACTGTTCTTGACTGGCCTTTGTTGAGGATCACAGTGTTAGTA--GGAAA--C-T---C-T-GATGAAACCTGAA-AAATAGAAT-T-ATTTTT-----TTCT----AT-AC-CT-TAGTATAAT---AC-AGACCCCAGTTTTAGACTTTTAAA--ACTTG-GG--AAAA----AACT-----GCCGATAATAATC-ATAGATT-AACGGTAagtcgagcattaacttctgacggaacaaaatatatttttctgtactcctacctctttttttaataccttaaaact
gi|30 : ----AGAAATCATAAAATATAAAGCATGTGAGAAA----TG-TTTAAAAC-TTCCTGTGCTTTTTGCAC-T-ACGTTCAAG-ATTATAGTCATCAG-AAATACTGTTGCCGAATGGCCTTTGTTGATGATCACAAAGTTTTGG--GGAAA--C-C---C-T-GACAAGACATGAA-AAAAAAAAA-A-A-AAAA-----TTCT----AT-AC-AT-TAGTACAAC---AC-GCACCC--GTTTTAGACCTTAAAA--TCTTG-GA--AAAA----AACT-----GCAGATTATAATC-CTATTTT-TATGGTAa
gi|31 : CAGAAT--------TTG-----------------AAT--AT-T---T-GCAACAGTCTAG------T--TA----GT-AAATAGAAG-ACTTCCGGT------------G-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTCT----CATTTGGAAGTTACAGATTAT------ACAATA-ATAC--C-AAA-AAG-GGTTTATCAGCTGTGTTTATTAAAT----AGGAATCATTAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTC-----TGATAGTCATCAG-AAATACTGTTGTCCACTGGCCTTTGTTGAta
gi|33 : AATATAAAGCAAGTAAGACA----TGTTTTAAAAT-TTCC-GTGCTAATTGCAG-T-ACGTTCAAG-ATCACAATCGTCAG-AAATGCTGCTTTTGACC-GCCATTGTTGAC-ATCG-ATAGTTTGGG--GGAAA--CTT---C-C-GACTCTACCTGAA-AAATATAAT-T-A-TTTT-----TTCT----AT-AC-TG-TAGTAT---------GCACCCCTGTTTAAGACCTTAAAA--ACTTT-GG--A
gi|35 : C-GACAGCAGCAA------AGGACGA---GGAA----AGTACAAGTGGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---G--ATTT---T--------CTT----G--TTCCAA--ATTTT---T------AAATTC-GTTTTGTTT-TA-TTTCTAATCAATAAACTGATAACAAT--T-------------------------AT----A--CA----TAATTGT-A-AAAAAAAT-GAAATTCATAATTGTAAAAAAT----------A---GTAA----------TATCA---ATA-TTTCA-TA----TA-TAtttttttttaattgcagttcaacaaaacaaaaat
gi|36 : GGGAATTCTATTTTCATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCATCTCGTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCACTTCTC-ACCAACGAGGTTCT
gi|37 : GAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATC-AAACCCTCAAAATCATCTCCTT-----------C-----------CA--------AGCAACAACAGCACGTTCTAAACCCTTTCTC-ACCAACGA
gi|38 : TATTAAATT-AAACAC-ATACAATTACCTC-----------C--------------CTTCAAATGAAAAGTAT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--AT-T---T-ATACCAGTTTAG------C--TAT---AT-TAATAGTA----TTCCAGT------------T-TAAAATTTATGTTGACAAAGATGT-TGT-C---------TTT-TCA-----CATTTAGAACCAACACAATAC------ACAA-----------AAA-T-T-GGTTTAAAAACT
gi|39 : TGATAATCT-GGCACCAGGAA------AGGATAATGTGGCA----GACTCAATTTGG---AA--ATTAGC-----A-------------A-TTTACT-----------GCTTTTGCATGATG----A-----CACT------TGTGC---A--TTTTAAAT--------TTT----GGTTGTCAAGGATTTT---T------AAATTTTGTTTTGTTT-TA-TTTTTAATCCATAAATTGAT-----T--T-------------------------AC----TAGCAATGGTAATTAT-A-AAAt
gi|4 : GTTTCCAACACCTAC-TCAAACATGTCACT-------------------------CAGTATTCGCACTCTTT-AAAT----GAAGATCA--AAGAGATGTTGATTAGTTTCAATTAACAGTGTTATAATCG-GACAGCAGGAA------AGGACCA---GGAA----AGGACAA-TGGG----A--GTCA-------ATTTTGTAAATGAAA-TTTACT-----------GCC---GC-CGA------AAATGACACCGTCC--TGTAC---A--ACACA--T--------CTT----T--T---AA--ATTTTGGTTGGCCAAAAATTT---TTTA-AT-TAGTTTTTCATCCATACATTAAT--TAACCGT-------------------------AT----T--CA----TAATTAT-A-GAAAATAT---AATTA-------------AG----------A----CAA----------TGCAA---GTGTTTCCA-TAATTATA-TGTTTCCATATTAAATT-GATCACCATACACTTG--CG-----------CTGTTTAATGACAAGC--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--ATAT---ATATACAAGTCTAG------T--TT----AT-AAAT---AG-ACTTCTGGT------------T-TAc
gi|4 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatATTTGGAAGTAATAAAATAC------AAAAAA-ATAC--T-AAA-A-ACAGTTTATAAACTtactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatatttggaagtaataaaatacaaaaaaatactaaaaacagtttataaacttggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|40 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatgtttccaacacctactcaaacatgtcactcagtattcgcactctttaaatgaagatcaaagagatgttgattagtttcaattaacagtgttataatcggacagcaggaaaggaccaggaaaggacaatgggagtcaattttgtaaatgaaatttactgccgccgaaaatgacaccgtcctgtacaacacatcttttaaattttggttggccaaaaattttttaattagtttttcatccatacattaattaaccgtattcataattatagaaaatataattaagacaatgcaagtgtttccataattatatgtttccatattaaattgatcaccatacacttgcgctgtttaatgacaagcgtaaaaatagtgaattgaacagaatttgaatatatatatacaagtctagtttataaatagacttctggtttatactttacgtttacgtaaaactggcctttttgatatttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatTTGTAAAAGATTAAAATGTTTGGGAGGGAAA--A-TGTCC-T-GACTA--CCTGAACAAATAAAAT-CCA-TTTT-----GTCC----AT-AC-TC-TAGTTTAACCTAACTGTAACCCT--TTAGGAC--TAAAA--ACTTA-AA--AAAAGAAAAACT-----GCCGGTTATAtggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|42 : taccggaaatgctgGTTGATGACTGAAAAGTTTGGG--AGAAA--C-T---TAC-AACGA------------TAAAATAT-A-TTTT-----TCCT----AT-AA-TC-TGATATTGC---CC-GCACCCTTGTTTGAGACCTTAAAAT-GTCTG-GGGCAAAA----AAC------ATGGGTTATAGTCTGCAGATT-
gi|43 : A---ATATTTAAAATA----TA-GATGTCCATATCGGATT-AAGTACTATAAAATCA--TC-----------C--------------T--------------TTTTAATGACA-----------AGTTTAAAATAGTGAATTGAACAGAAT--------TTG-----------------AATAAAC-T---TTGTTTCAGTagggttacagatg
gi|44 : aaaagaggacaataattacaaaa--------------C--------------GT--------------------A----AAAATAATAAATTTAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTAAAAGTTACAGAATAC------ACAATag
gi|45 : gagGATCAGAAT--------TTG-----------------AAT--AT-T---T-GTACCAGTCTAG------T--AA----AT-AAATTGAAG-ACTTCCAGT------------T-CAG---------CAA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACTATA-ATACA-C-AAA-A-C-GGTTTATAAAta
gi|46 : CACG-GTGAAATTCACCAG-AAATGCTAT----G----------GTTGATGATCGAAAAGTTCGGA--AGAAA--T-G---A-T-GTCGGGATCTGAA-TAGTTAGATAT-A-TTTTTGATATTCTAATGAT-AC-CT-TA
gi|47 : TTCTCAACATCTAC-TCAAACGTGTCACAA-T---TGCCACT-----TGTCAGATGGTATTCACACTCTTT-AATT----C---------AAGAGATGTCAATTA--TTAAAT-------GTGATAATCG-GACaaaaatttaagaaaa
gi|5 : CCTCTTCTT---CGACA--GTTCTCATTGCCTAC-TCAAACATATCACTA-TATTTGTCCCT-----TATCAAACGGTATTCACACTCTGT-AATT----GAAGATGATGAAGAGATGTCGGTTAGTTTCAATTAACAGAATGATAATCT-GACAGCAGGAA------ATGACTA---GAAA----AGTACCAGTGGG-CGGA--GTCA-------ATTTTGTA------A-TTGGCTTGCAATTTACTGCC---AC-AAA------A-----CATC------TGCCC---A--ATTT---T--------GTT----G--TCCCAG--ATCTT---T------AAATTT-GTTCTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--TATTCATAATTATAAAAAAATTGTAAAT----T--CA----TAATTGT-A-AAAAATAT-TAA-TTA-------------AG----------A----CAA----------TATAA---ATATTTTCAATA----TA-TATTTCTTTATTACATT-AAACACTATATAATTG--TC-----------T--------------C--------------ATTTAATGACGAGCAA------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---T-GCACCAGTCTAG------T--TA----AT-A----GCAG-ATTTCTGGT------------T-TAA---------TGA-AAAG-TTT-TGT-T--------GTTT-TTC------ATTTGGAAGTAACAGAATGC------ACAATA-ATAC--C-AAAGA-GTGGTTTATAAACTATGTTTATTAAAT----AGAAATCATAAAATATAAAATATGTAAGACA----TT-TTTATAAT-TTCCTGTGCTTATTGCAC-T-TTGTACAAG-ATGGTAACCGTCAG-AAATGCTG--------------TTGTTGATGATCGCAAAGTTTGGG--AGAAA--C-T---C-A-GGCAAGACCTGAA-AAATATAAT-T-A-ATTT-----TTCT----AT-AC-AC-TAGTATGAT---AG-GTACCCCAGTTTTA
gi|53 : cacgtcGGTTCTGAACACCTAC-ATACAAGTGTCACTA-T---TGA-ACT-----GGACAAATGGTATTCGCGCTTTTT-AATT----CAAGag
gi|54 : A-TATTTCCATATTAAATT-AAATACCATACAATTA--TC-----------C--------------T--------------GT--------------------
gi|55 : GGAATTTGCTATCTTT-AATT----GAAGATCA--AAGAGATGCCAGTTAGTTttgatgaca
gi|57 : agGGAAATTTTATTTTAATTTCAAATGCTATAT-ATA
gi|6 : CCACT--------CAA---GTATTTATGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTTAATTAACAGGGTGATAATCC-AACAGCAGTAACTGTTAAGGACAA---AGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------ATT---GC-CGA------A-----CACC------TGCAC---A--GTTT---T--------GTT----G--TCCCAA--AGTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATGAT--T-------------------------AT----T--CA----TAATTGT-T-AAAACAAT-GAAATTC-------------ATAATTGTTAAAA---GTAG----------TATTAGCTATATTTTCA-TA----TA-TAATTCTTTATTACATT-AAACACCATACAATTA--TC-----------CTGTTTAATGGCGAGC--------------GT--------------------G----AAAATAGTAAATTTATCAGAAT--------TTA-----------------AAT--A--T---TTGCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCGGGT------------T-TAG---------CGA-AAAG-TGT-TGT-T--------GTTT-TCC-----CATTTGGAAGTTACAGAATAC------ACAATA-GTAC--C-AAA-AGG-GGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----CG-TTTATAAC-TTTGTGTGCTTTTCGCAC-T-ATGTTCAAG-ATGATA--------------CTGTTCTCGACTGGATTTTGTTGGCGATCCCGAAGTTTGGG--GGAAA--C-T---C-C-GATAAGACCTGAA-AAA-AAAA----A-TTTT-----T--T----AT-AC-CT-TAGTATAAT---AC-GCACCCCTGTTTTGGACCTTAAAA--ACTTG-GG---GAA----AACT-----ACGGATTATAATC-ATATTTT-TACGGTAc
gi|7 : caaacCATCAACACTCTCAAAGTCATCTCCTT-----------C-----------
gi|8 : gcatgtaatttatgcacaaatggtttaacacacaggcactggtcacaatttttttttttagtatatttggtcatatagtatctatatagtagactggtcacaaactctttttttagtatattaaaattatggtcatgtagtaccgtattttcccaattataatctttactcaagtataatccgctggtgattttgaaagcaaaactggtgggaaaaagatagtatacatctattatctgcaggcatgaatcaattgtttacctcatccgccattttgaaattcagaccaaagtgaaagaagaatttggattggttcttcatggcgtaacaaaatcaatactggtgtactgcataattttgtaaaaaaacgtaggtgaaatgttttgatgtgatatatagtgtgttggagacaataaaatttgtgaatataaaatggtgttaccataattacttttatgtgtatttgggtaagaaaaagtgaaaataaaaacaaactattgacaatttttttaaatgcatctttcgagaaatatttggaccatcaccctttcactgtaattgcatcattcagcagtctctaatgtccgatgAATGATAACAAGTTCTAAACACCTTCTC-Aaatgacgctgtcc
gi|8 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttAAGTTCTAAACACCTTC-TCAAACGTGACACAA-T---TGTCAAG-----CACCAATTGGTATTC-TACTCTTT-AATT----GAAGATAA--AATAGAT---AATAAGTTTCAATTAACAGCGTG----TCCTG-----AGGAA------AGGACAA---GGAGGCTTAGT-CAATTTTG-T-AATTGTCATGG----A-------------ACTTCTT------------GTC---GC-CAAACAATGA-----CACC------TGTACATAA--ACTT---TAAATTATGTTT----G--TCTT-A--GTCTT---T------AAACTT-GTTTTGAG---A-TTTTTAATCCTTAAACTCAT-----T--T-------------------------AT----T--CA----TATTTAT-ATATAAAAA---AAATCC-------------------------A---ACAA----------TACAA---ATATTTCCA-T--------------TTTA----ATT-AAACACCATACACTGA--TC-----------CCATTTAATGATAAAC--------------GT--------------------A----AAAATAGACAAATGAACAGAAT--------TTG-----------------AAT--AT-aacgtgacacaattgtcaagcaccaattggtattctactctttaattgaagataaaatagataataagtttcaattaacagcgtgtcctgaggaaaggacaaggaggcttagtcaattttgtaattgtcatggaacttcttgtcgccaaacaatgacacctgtacataaactttaaattatgtttgtcttagtctttaaacttgttttgagatttttaatccttaaactcatttattcatatttatatataaaaaaaatccaacaatacaaatatttccattttaattaaacaccatacactgatcccatttaatgataaacgtaaaaatagacaaatgaacagaatttgaatatgtgta
gi|9 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttaatgataacACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------GATGTTGCTGAGCAACAAGAATACATTCTAAACCCCTTCTC-ACCGGCAAGGTTCTCAACATCTAC-TCAAACGCGTCACTA-C---TGCCACC-----TGTCAAACGGTACTCCCACTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGAAAAACT-GACATCAGTA------------AA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------GCC---AC-TGA------A-----CACC------TGCAT---C--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TT-TTTTTAATCAATAAACAGAAAATAAT--T-------------------------AT----T--TA----TAACTGT---AAAAAAAT-GAAATTC-------------AT----------A---ATgtgta
blockSeqs : T T GAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN C AGATGTCGCTGTCA G C C . T ATT C GCCAC T CTGA TG G A T C CTGTTA TGT GCTT TCG TT GTTTTGTAATTGGCATGCAATTAACA TTT A ACAATG AATGA GACAAA ATAA TAAATTATGT TTTT GT GG GGT GGCCAA T A G A CG ATTCATAATTATAAAAAAATTGTAA AACC AG ATGG AA TTG ATAATTGTAAAAAATAG AAAATAGTTAT TG GCT A ATTA A T TAC C CC CCGTTTACCGGTAATGACAAGCGT GTTT TAGAATAT TACCANNNNNNNNNNAG AA A CTT T ATTTTG AT CTCC C A A T TTAAAGATCATG A AATTTATGTT C T A C TTATAAAAG A TTATT A GTGAAA T AC T AT TTTT TGTT T A A A G A A T G A C GTT TG A C AG TG TGTCCT G T C T A C T TGATA AATG T CTA CTA T A TC C GC GAAA TGGGT C T GT A
blockSeqs : . T NNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN C CGATGTCGTTGTCA . C C . . . C . . . . G A T C . . . CG . ATTTTGTAATTGGCTTGCAATTTACT . . TG . GTCC ATA AAATT . . . . . . . . A . . . . . AT TG ATAATTGTTAAAAG A TC . A . . T AAC . . CCGTTTAATGGCGAGCGT . . . . . . T . . T . A A . . . TTGC . A A . T . T T . . AC G AG . . . . G T . . A . A . T TTT TG T C . . TTCC G G . A A . . . . . TCT . . T T . . . . A . TT .
blockSeqs : . . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN C TGTTATCACTGCCG . A C . . . T . . . . A A . G . . . TG . ATTTTGTAAATGAAATTTACT . . . . . A ATC . . . . . . . . A . . . . . A TG ATAATTG T TC . . . . A TTC . . CAGGTTAAAAGCAAGTGT . . . . . . T . . T . A A . . . C . . . . G . . A . . TG . AT . . . . T A . . G . A . C GCT TG G C . . TTCT G T . T A . . . . . TC . . A . . . . . T . GA .
blockSeqs : . C CGATGTTGCTG . A G . . . C . . . . G T . T . . . CG . TGGAACTTCTT . . . . . A TC . . . . . . . . G . . . . . A TG ATAATTG A TC . . . . A TAA . . TTGTTTAATGACAAGTTT . . . . . . T . . C . T A . . . C . . . . T . . T . . AC . AT . . . . C G . . A . G . T GTC TA T T . . TTTA G G . A . . . . . . AT . . T . . . . . A . GA .
blockSeqs : C CAATGTCC . A G . . . A . . . . G A . T . . . CG . GCAATTTACT . . . . . A TC . . . . . . . . A . . . . . G TT ATAA T CA . . . . T TAA . . ACATTTAATAGCAAGCAT . . . . . . T . . T . G T . . . C . . . . G . . A . . AC . AG . . . . T A . . A . A . T CTT TG T C . . TTCA G G . A . . . . . . TC . . A . . . . . A . TT .
blockSeqs : C CCA . G G . . . C . . . . G G . C . . . CG . AATTGGC . . . . . G TG . . . . . . . . A . . . . . A TG ATAG T TA . . . . T CGG . . CCTTCAAATGAAAAGTAT . . . . . . T . . . . A A . . . C . . . . A . . A . . T . AG . . . . A T . . C . C . T GCC TG T C . . TTTT G G . T . . . . . . AT . . A . . . . . G . GA .
blockSeqs : . CCA . G A . . . T . . . . G C . G . . . TG . AATTTGT . . . . . A TC . . . . . . . . A . . . . . A TG ATAA T TT . . . . A TAC . . CTGTTTAATGACAAGCGT . . . . . . T . . . . A A . . . C . . . . G . . T . . C . AC . . . . A A . . A . G . T GTC TG T A . . TTCC G G . A . . . . . . TT . . C . . . . . G . TT .
blockSeqs : . . . A . . . A . . . . G A . G . . . TG . AATTGGT . . . . . A TG . . . . . . . . A . . . . . A G TTA T CA . . . . A TAA . . TCATTTAATGACGAGCAA . . . . . . T . . . . A A . . . T . . . . G . . T . . T . GT . . . . C A . . C . G . T TTT TG T A . . TTAC A T . G . . . . . . AT . . T . . . . . A
blockSeqs : . . . . . C . . . . G . . G . . . C . AATAAGC . . . . . A TG . . . . . . . . A . . . . . A T AAT T C . . . . T TAC . . CTGTTTAATGGCGAGCGT . . . . . . . . . . . A T . . . T . . . . G . . A . . T . GG . . . . C T . . A . A . T CTC C A A . . TCT T A . A . . . . . . CT . . T . . . .
blockSeqs : . . . T . . . . . . . T . . . T . AATTGGC . . . . . A TC . . . . . . . . A . . . . . A . AGA . C . . . . A TT . . CCATTTAATGATAAACGT . . . . . . . . . . . A A . . . C . . . . G . . T . . T . G . . . . C A . . A . A . C TT A T C . . TCT T G . T . . . . . . AT . . A . . . .
blockSeqs : . . C . . . . . . G . . . . . AATTGGC . . . . . C T . . . . . . . . . . . . . . A . AGA . . . . . . T C . . CTTTTTAATGACA . . . . . . . . . . . T A . . . C . . . . G . . T . . C . G . . . . A T . . A . A . T . C . C . . TCT G T . A . . . . . . TG . . A . . .
blockSeqs : . . . . . . T . . . . . AATTGGC . . . . . . . . . . . . . . . . . . . . . T . AA . . . . T . . . CCAT . . . . . . . . . . . A C . . . T . . . . G . . A . . C . T . . . . C T . . C . G . T . . . . . . CCT G G . A . . . . . . TC . . G .
blockSeqs : . . . . . . . . . . . . . . . CGGT . . . . . . . . . . . . A . . . C . . . . G . . A . . T . T . . . . C T . . A . A . . . . . . . . GAT A G . A . . . . . . TC . . T
blockSeqs : . . . . . . . . CTGT . . . . . . . . . . . . . . . . . . . . . . . . T . . C . G . . . . C A . . A . G . . . . . . . . TCA A G . T . . . . . . CT . . T
blockSeqs : . GT . . . . . . . . . . . . . . . . . . . . . . . . T . . C . T . . . . C A . . . . . . . . . . TCC . . . A . . . . . . AC
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . A . . . . T . . . G T . . . . . . . . T . . . . . . . . . . CT
blockSeqs : . . . . . . . . . . . . . . . T . . . . C . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . .
blockSeqCons : CGATGTCGCTGCA******************** ATAAG************************* ** C*** AN*
originalCons : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTT-----------C-----------CA--------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTC-------------AT----------A---GTAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATAC--C-AAA-A-G-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
finalCons : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTTCGATGTCGCTGCA--------------------AGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTCATAAG-------------------------TAA----------TATCA---ATATTTTCA-TA----TA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--AT-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TAA---------CGA-AAAG-TTT-TGT-T--------GTTT-TCC-----CATTTGGAAGTNACAGAATAC------ACAATA-ATACC---AAA-AAN-GGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATATAAAGCATGTAAGACA----TG-TTTAAAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTT-----TTCT----AT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
14 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATTTACCTTTATGTATATTCATTAAATTTTGATACTGCTTTACCTATTTTTGTCAGAGTTGAACTTAATACAGTATATCTCCAGTTATATTCCGCACTGGAGTATAATCTGCAGGTTATTTTGAAGCCAAAACTAGTGGAAAAAAGCAAGTATACGTTTATTATCCGTAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGACAAAAGTGAAAGATGAATTTTGATTGGTTATTTATTGAGTAACAAAATCTAGACTGGTGTACCGCTTAATTTTGTAAAAAACTTCGGTAAAACATTTTGATGTGATATATAGTGTGTTAGTGACATAAAACTTGCGACTATAAAATGGTGTTATTGAAATATCTTTATGTGTATTTGG
Unaligned ( gi|21 ): TCCTGATGCTTCTTCTAAAATGGTTATACCAAAATAGTTTTTTGCAAATTGGGGTACCGTATATCGCCAATTATAAACCGCACCCAAGTATAATCCGCAGGTGATTTTGAAGCCGAAACTGGTCGAAAAAAGCTAGTATCCGTCTATAATCCGCAGGCATGAATCAGCTGAACCAGCTGTTTACTACATCTGCCATTTTGAAATCCAGACCAAAGTGAAAGATGAATTTTGATTGGCTTATTATGGAGTAACAAAATCTAGACTGGTGTACTGCATTACTTTGTAAAAACATAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGAAAATTTGCGAGTACCAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGGG
Unaligned ( gi|22 ): TGACCCTAATTTTACTCTATTTCCAAAGTATAATCCGCACTTGAGTATAATCCGCAGGTGATTTTGAAGTGAAAACTAGTGGAAAATTGCTAGTATACATCTATTATCTGCAGGCATGATTCAGTTGTTTACTACTTCTGCAATTTTGAAATCCTTACCAAAGTGAAAGATCAATTTTGATTGGTTATTCATGGAGTAACACAATCTAGACTGGTGTGCTGCATGATTTTGTCAAAAACGTAGGTAAAATATTTTGATGTGATATATATAGAGTGTACTTCAAAATCCCTATGGCTCAAAAATGACATGGTACTCAAAATCCCCTTGATGGGTGGCAT
Unaligned ( gi|23 ): AATCTCCAAGTATAAACCACACCCAAGTATAATCTGCAGGTGATTTTGAAGCCAAAACTGGTCGAAAAAAGCTAGTATCTGTCCATAATCCGCAGGCATGAATCAGATGAATCAGCTGTTTACCACATCCATCATTTTGAAATCCCAACCAAAGTGAAAGATGAATTTTGATTGGCTAATTATTGAGTAACGAAATCGAGACTGGTGTACTGCATAACTTTGTAAAAACGTAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGGAGACAATAAAACTTGCAAGTATAAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGG
Unaligned ( gi|28 ): ATTTATGTTTATTTATAGGTTATTTATTCCTGGTCATATTTTTTTTGTTTTTAAAGGGAATATACCATAAATCTCCTATTATAAACCGCACTCAAGTATAATCCGCAGGTGATTTTGAAATCGAAACTGGTCGAAAAAAGCTTGTATACGTCTATAATCCGCAGGCATGAATCAGATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGATCAAAGTGAAAGATAATTTTTGATTGGCTAATTATTGAGTAACAAAATCTAGACT
Unaligned ( gi|32 ): ACTACCGTAATCGTTTGATTATACCCCTTTGCCAAGTATAACCTGCAGGCTAATTTTGAAGCCAAAACTTGTGAAAAAAAAACTTATATCCATGAATAATACGCAGTTGTTTACTACTGCCGCCATTTTGAAATCGAAAGACAAATTTTGATTGGCTAGATTTTAAGTCACATAATCTAGACTGGCATACTGTTAATTTTGTAAAATCACATGTGATAACTACTATTAAATATTTTGTGTAA
Unaligned ( gi|34 ): TTTTAATTTAGACTTTATGTCATACTTTTGACAAATAACCACAGACCCTGGACTTTTGATTTTAACATACAGTAATCTTCCAATTATAACATGCCACCAAGTATACCCCGCATGCTGATTTTGAAGACAAAATTGGTGGAAAAAAGTAAATATATATCAATTATACACAGCCATTATATCTTCAAATCCAAATCTGTTCGCCATTTTGA
Unaligned ( gi|41 ): CTTTGATCTCTCGAATAAAAGTCTCCTCAGAGTATCACAGACTGATTTTGTATCCAAATCTGGTGGAAACATAGCTCTTGTATCCTGGCATATCACACAGCATGAAATTGAGAGTTTACCATGGCCACCATTTTAAAATCAATACAAAAG
Unaligned ( gi|48 ): ATGCAATTCAGTCTTTATTCATGTTCAATTAGTTATATAAAAAAAATTAGATATGCGTACACTCAACTAGTATTTACTGTTGATTGTTACTACCAT
Unaligned ( gi|49 ): GACTATTGCTTATTTTTTTATAAAAATATACCGTAATATTGCAAATATAAGACACCCCAAAGTATCACCTGCAGGCTGATTTTGAGGCAAAGATAA
Unaligned ( gi|50 ): ACTATTGGATAAAATATAGGTAAAACATTTTGATGTGATATATAGTATGTTAGAGACAATAAAACTTGCGAGTATAAAATGGTGTTACCGA
Unaligned ( gi|51 ): GCAGTTCAGCAAAACAAATGCGAGTTGAAAATATTTGCATAGGTTAAAAAAAGCCAGTGGATTAAAAAGTTAAAATTCTACCCCTG
Unaligned ( gi|52 ): ACTACAGTATTTCGCAAATTATAATCTGCACTCGAGTACAATCTGCAGGTGCTTTTGGAGCCAAAACTATTGGATAAAAT
Unaligned ( gi|56 ): AAATCCCCATGGCTCAAAAATGACAAAGTAGTCAAAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 555555555555555555555555555555555555555555555555555555555 1 22222222222 4444444444444444444444444444444444444444 111111 111111 1111111111111 2222222222222222222222222 4444444444444444444444444444444 11111111111 1111 222222222222222222222222222222222222222222222222222222222222222 11111111111111111 1 1111 111111111111 2222222222222222222222222 1111111111 111111111 11111
lowQualScore : 8 3 888 777777777777777777777777777777777777777777777777777777777 0 77777777777 4 4 8 1 3 3 555 1 77777 0 0 2 6666 44 1 3 5 1 888888 555 6666 777 44 0000000000000000000000000000000000000000 555 3 333333 77777 555555 555555 6666666666666 6666 44 0 44 555 888888 3 3 3 2 33 6666666666666666666666666 5555 33 5555 888 888 0000000000000000000000000000000 44444444444 55 555 2222 2 2 999 2 0 33 777777777777777777777777777777777777777777777777777777777777777 5555 77777777 44444444444444444 22 666 333 5 666666 22 2222 2 8 1 2 111111111111 2 3333333333333333333333333 2 4 4 2 3333333333 2 7777777 1 333 2 4 2 1 2 5555 2 33 4444 2 2 2 2 1 2 2 1 2 1 2 0 2 666 44 3 1 6 33 33 555555555 2 4 2 3 55 2 2 2 4444 444 2 1 77 3 44 7777 11111 1 5 22 5
lowQualScore : . . ... ......................................................... . ........... . . . . . . ... . ..... . . . .... .. . . . . ...... ... .... ... .. ........................................ ... . ...... ..... ...... ...... ............. .... .. . .. ... ...... . . . . .. ......................... .... .. .... ... ... ............................... ........... .. ... .... . . ... . . .. ............................................................... .... ........ ................. .. ... ... . ...... .. .... . . . . ............ . ......................... . . . . .......... . ....... . ... . . . . . .... . .. .... . . . . . . . . . . . . . ... .. . . . .. .. ......... . . . . .. . . . .... ... . . .. . .. .... ..... . . .. .
lowQualScore : 0 2 222 000000000000000000000000000000000000000000000000000000000 0 66666666666 4 0 2 9 6 3 888 4 77777 6 9 9 1111 22 8 5 7 0 888888 444 5555 000 22 3333333333333333333333333333333333333333 444 1 111111 77777 444444 555555 5555555555555 5555 22 2 22 444 888888 1 1 1 6 77 7777777777777777777777777 7777 77 7777 555 888 0000000000000000000000000000000 99999999999 44 444 7777 9 0 666 7 5 44 666666666666666666666666666666666666666666666666666666666666666 0000 22222222 00000000000000000 88 333 777 5 111111 99 9999 2 4 9 2 444444444444 2 5555555555555555555555555 2 4 4 2 7777777777 2 4444444 7 777 2 8 2 0 8 0000 2 11 7777 2 2 2 2 0 4 4 3 4 7 5 1 1 222 99 4 7 1 44 44 222222222 4 5 5 1 22 5 5 5 8888 777 7 0 33 3 66 7777 11111 0 0 00 0
consensus : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTTCGATGTCGCTG-C-AAGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTCAT---------A------------A--G-TAA----------TATCA---ATATTTTCA----TATA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--A-T-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TA------A---------CG-------A-AAAG-TTT-TGT-T--------G-TTT-TCC-----CATTTGGAAGTTACAGAATAC---ACAATA-ATACNAAA-AANGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATAT-AAAGCATGT--AAGACA----TG-TTTA-AAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTTTTCTAT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
Reference ( family-188 ) : GGAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANCATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCAAAACCCTCAAAGTCATCTCCTTCGATGTCGCTG-C-AAGCAACGATAACACGTTCTAAACCCCTTCTC-ACCGACGAGGTTCTCAACACCTAC-TCAAACGTGTCACTA-T---TGCCACT-----TGTCAAACGGTATTCGCGCTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGATAATCC-GACAGCAGNAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGT-A-AAAAAAAT-GAAATTCAT---------A------------A--G-TAA----------TATCA---ATATTTTCA----TATA-TATTTCTTTATTACATT-AAACACCATACAATTA--TC-----------C--------------C--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--A-T-T---TTGCACCAGTCTAG------T--TA----AT-AAATAGAAG-ACTTCCGGT------------T-TA------A---------CG-------A-AAAG-TTT-TGT-T--------G-TTT-TCC-----CATTTGGAAGTNACAGAATAC---ACAATA-ATACCAAA-AANGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATAT-AAAGCATGT--AAGACA----TG-TTTA-AAAC-TTCCTGTGCTTNTTGCAC-T-ACGTTCAAG-ATGATAGTCGTCAG-AAATGCTGTTNTCGACTGGCCTTTGTTGACGATCGCAAAGTTTGGG--GGAAA--C-T---C-C-GACGAGACCTGAA-AAATAAAAT-T-A-TTTTTTCTAT-AC-NT-TAGTATAAC---AC-GCACCCCTGTTTNAGACCTTAAAA--ACTTG-GG--AAAA----AACT-----GCGGNTTATAATC-GTANNTT-TACGGTA
gi|1 : GGAAATTTTATTTTAATTTCAAATG----AT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCGTCTCCTTC-----------C-AAGCAACGATAACACGTTCTAAACCCCTTCTC-ACCAACGAGGTTCTAAACACCTACATCCA-CGTGTCACTA-T---TGACACT-----TGTCAAACGGTATTCGCGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTACTTTCAATTAACAGAGTGATAATCC-GACAGCAGTAA------AGGACAA---GGAA----AGTACAAGTGGG-CGGA--GTCA-------A-------------A-TTGGC------------GCC---GT-CGA------A-----CACC------TGCAC---A--ATTT---T--------CTT----G--TCCCGA--ATTTT---T------TAATTT-GTTTGGTAA-TA-TTCTTAATCAATCAACTGATAATAAT--T-------------------------AT----T--CA----TCAGTGT-T-AAAAAAAT-GAAATTCAT---------A---------------G-TAA----------TATCA---ATATTTTCA----TATA-TATTTCTTTATTACATT-AAACCCCATACAATTA--TC-----------C--------------T--------------GT--------------------A----AAAATAGTGAATTGAACAGATG--------TTG-----------------AAT--AATAT---TTGTACCAGTCTAG------T--TA----AT-AAATTGATG-ACTTCCGGT------------T-TA------G---------CG-------A-AAAG-TTT-TGT-T--------G-TTT-TCC-----CATTTGGAAGTTACAGAATAC---ACAATA-ATACATCA-AAGGGTTTGTAAACTACGTTTATTTAAT----ATAAATAATAAAATAT-AAAGCATGT--TAGACA----TG-TTTA-AAAC-TTTGTGTGCTTTTTGCAC-T-ACGTTCAGG-ATGATAGGCATCAG-AAATACTGTTCTCGACTGGCCTTTGTTGACGATCGCAAAGTTAGCG--GGAAA--C-T---G-G-GATGAAACCTGAA-AAATAAAAT-T-A-TTTTTTCTAT-AA-CA-TACTATAAA---CC-GCACCCCTGTTTCAGACCTTAAAA--AACTG-GG--AAAA----AACT-----GCGGTTTTTAATT-GGTTATT-TACGGTA
gi|10 : AA----------AATGA---ATTTTATCC----TATAATA---CTTTAT-------AAACACCATACAGTTA--TC-----------C--------------C--------------GTTTACCGGTAATGACAAGCGTA----AAAATAATAAATGGAACAGAAT--------TCA-----------------AAT--A-T-T---T-GCACCAGTCTAG------T--TAT---AA-AAATAGAAG-ACTTCCGGT------------T-TA------A----------G-------A-GAAG-TTT--GT-T--------T-TTT-TTT-----CATTTGGAAGTAAAAGAATAC---ACAATA-ATACTAAA-AATGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAATAT-AAAGCATGT--AAGACA----TA-TTTT-AAAC-TTTACATGCTTAATGCAC-T-AGGTTCAAG-ATCACAGTCGTTAG-AAATGTTGCTTT-GACC-GCCATTGTTGAC-ATCG-ATAGTTTGGA--GGAAA--CTT---C-C-GAC--TACCTGAA-AAATATAAT-T-A-TTTTTTCTAT-TC-TC-TAGTATAAC---AC-GCATTCTTGTTTAAGATCTTAAAA--ACTTA-GG--AAAA----AA
gi|11 : atgtgtaaaaaccagaaTAATTAATAA--CAAAAATAAT--T-------------------------GT----T--CA----TAATTGT-A-AAAAAA-T-GAAATTCAT---------A------------ATTG-TAAAAAATAGTTATATCA---ATATTTTCA----TATA-TATTTCTTTATTACATT-AAACATCATACAATTA--TC-----------C--------------C--------------GTTTAATGGCGAGCGT------A----AAAATATTGAATTGAACAGAAT--------TTG-----------------AAT--A-T-T---T-GCGCCAGTCAAG------T--TA----AT-AAGTAGAAG-ACTTCTGGT------------T-TA------A---------CA-------A-AAAG-TTT-TAT-T--------G-T--------------------GTTGCAGAATAC---ACAATT-ATACCAAA-AAGGGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATAT-AAAGCATGT--AAGACATGTTTG-TTTA-AAAC-TTTGTGTGCTTTTTGCGCGTAACGTTCAAG-ATGATAGTAATCAG-AAATACTGTTGTTGACTGGCCTTTGTTGATGATCGCAAATTTTGGG--GGAAA--C-T-------GATGAGACCTGAA-AAATAATTT-T-T-TTTTATCTAT-AC-AT-TAGTATAAT---AC-GCACCCCTGTTTTCGACCTTAAAA--A-TTG-GG--AAAA----AACT-----GCGGCTTATAATC-ATAGTTT-TATGGTAaatttttgtagttcaaccaaacaaaaatgcgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaagttaaattctacccctgt
gi|12 : ACTCATCAAAA-TCTCAAAATCATCTCCTTAGATGTCGCTGTC-AAGCAACAATAACACGTTTTCAACCCCTTCTCGACC-ACCAAGTTCTCAACACCTAT-TCAAAGGTGTCACTG-T---TACCACTGCCACTATCACATGGTATTCCCACTCTTT-AATTCTGACAGCAGCA--AAG-GATG
gi|12 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctTAATTCTGACAGCAGCAA------AGGATGA---GAAA----AGTACAAGTTGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CCA------A-----CACC------TGCAC---A--ATTT---T--------CAT----G--TCCCAA--ATTTT---T------TAATTC-GTTTTGTGT-TA-TTTTTAATCAAGTAACTGATAATAAT--T-------------------------AT----T--CA----TAATagaaaagtacaagttggcggagttaaattggcgccgcccaacacctgcacaattttcatgtcccaaattttttaattcgttttgtgttatttttaatcaagtaactgataataattattcataat
gi|13 : aaaatggtgttaccgtaattatttttatgtgtatgtgtatttgggtaagataaaagggaaaaaactattgacaattttttttttaagtgcacctttctagaaatgtttgggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattctcactgtatctgcatcattcagcagtctctgatgtcctactcatcaaaatctcaaaatcatctccttagatgtcgctgtcaagcaacaataacacgttttcaaccccttctcgaccaccaagttctcaacacctattcaaaggtgtcactgttaccactgccactatcacatggtattcccactcttACTCATTAAACCTCTCAAAGTCATCTTCTTTGACATCGCTGTC-GAACA
gi|14 : ccgcaggtaaagttgaagccaaaactggtcgaagaaagctattgaacatctattatccgcaggcatgaatcagttgtttactacatccgccattttgaaatccgaaccaaagtgaagtattttgattggctaattatggagtaacgaaatcaagactagtgaactgcataactttgtaaaaacgtaggtaaaaagttttgacgtgatatatagcatgttagaaacaataaaatttgcaagtataatgtggtgttactattttttatgtgtatttgggtaagacaaaagggaaaatacaaacaaactattgacaatttttttatgtccattttgtgcagaacatttgggtcctaaagaggaccatcaccctctcactgtatctgcatcattcagctgtctctgatgtcagACTCATCAAAACTCTTTAAGTCATTTCCTTCAATGTC-----C-A-GCAACAATAACATATTCTCACCTCCTTCTC-ACCCACCAGGTTCTCAACACTTAC-CCAAACGTGTCACTATT---TGCCACT-----TGTCAAACAGTATTCGCACTCTTT-AATT----CAAGATCA--AGGAGATGTCAA-TAGTTTCAACTAACAGAGTGGTAATCC-GACTGTAGCAA------AGGACAA---GGAA----AGTACAAGTGGG-C--A--GTCA-------A-------------A-TTTGT------------GCT---GC-CAA------A-----CA------------------------------------------------CAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-TGTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--CA----TAATTGTAA-AAAAAAAT-GAAATTCAT---------A------------A--gatgccgaaactgttcgtca
gi|15 : aagataaaagggaaaattaaaacaaactattgacaattttttaagtgcatctcaatagaaatatttgggtcctaaaaaggggcaatcaccctctcaatgtatctgcatcattcagcagtctctgatgtccgAATGGAACAAAAT--------TGG-----------------AAT--A-T-T---T-GCACCAATCTAG------T--TAT---AT-AAATAGAAG-ACTTCCGGT------------T-TA------A---------CG-------A-GAAGTTTT-TGT-T----------TTT-TTT-----CATTTGGAAGTAAAAGAATAC---ACAATA-ATACTAAA-AATGGATTATAAACTGTGTTTATTAAAT----AAAAATCATAAAATAT-AAAGCATGT--AAGACA----TA-TTTT-AAGC-TTTTTGTGCTTATTGCTC-T-ATGTTCA---------------AG-AAATGCTGCTTTTGAC-AGCTGTTGTTGAC-ATCG-ATAATTTGGG--GGGAA--CTT---C-T-GAC--TACCTTAA-AAATATAAT-T-A-TTTTTTCTAT-AC-TC-TAGTATAAC---AC-GCATCTCTGTTTAAGACCTTAAAA--ACTTA-GG--AAAA----AAt
gi|16 : aaATACAATTA--TC-----------CAGGTTAAAAGCAAGT--------------GT--------------------A----AAAATAGTGAATTGAACAAAATTAGAATATTTGTACCANNNNNNNNNNAGAAT--A-T-T---T-GTACCAGTCTAG------T--TA----AT-AAATTTAAG-ACTTCCGGT------------T-TA------A---------CG-------A-AAAG-TTT-TGT-T--------T-TTT-TCC-----CATTTGGAAGTTACAGAATAC---ACAATA--TACACAA-AAGGGTTATTAAACTGTGTTTATTAAAT----AGAAATCATAAAATTT-AAAGCATGT--AAGACA----TG-TTTA-AAAT-TTCCTGTGTTTGTTGCAT-A-ACGTTCAGG-ATGATAGTCATCAG-AAATACTGTTGCTGACTGGCCT---ATGACGAACGCAAAGTATGGA--AGAAA--C-T---C-T-GATGAGACCAGAA-AAATAAAAT-T-A-TTTTTTCTAT-AC-AT-TAGTATAAT---AC-GCACACCTGTTTTAGAGCTTAAAA--GCTTG-GG--AAAA----AATT-----GCAGATTATAATC-GTATTTTATACTGTattttttttgcaattcaaccaaacaaaaatgtgagttgaaagataaaaatgcgagttgaaaatatttgcactggctaaaaaaaaaagttaaattctaaccctggca
gi|17 : caAAACATGTTAGTA-T---TGTCAAG-----TATGGAAGGGAATTTGCGCTCTTT-AATT----GAAGATCA--A-GAGAT--CAATTAGTTTCAATTAGTGCACTTATAATCT-CACAGCAGGAA------AGGACAA---GGGA----G----AGGTGGG-
gi|17 : tTGGGTCGGA--GTCAGTTTTGTA-------------A-TTGGCATGCAATTAACAGCC---GC-CAA------A-----CATTGACAAATGCAC---ATAACTT---T--------CTTTTTTG--TCATAG--AGTTT---T------AAATTT-G-TTTATGTAAA-TTTTCAATCCATAAACTGTTGTT--T--T-------------------------TT----T--CA----TAGCTAT-A-AAAAAAA-------TCTT---------A---------------------------------CA---ATATTTACA----TATA-TAT-----------ATT-TAATG----ACAA------------------C--------------C--------------AT--------------------A----AAAATAGTGAATTGATCAGGAT--------TTA-----------------AAT--A---T---TTGTACCAGTCTAG------T--TA----gtgggttagtgttagtggtggaggggggtgtagggggatgggtcggagtcagttttgtaattggcatgcaattaacagccgccaaacattgacaaatgcacataactttcttttttgtcatagagttttaaatttgtttatgtaaattttcaatccataaactgttgtttttttcatagctataaaaaaaatcttacaatatttacatatatatatttaatgacaaccataaaaatagtgaattgatcaggatttaaatatttgtaccagtctagttatacacattatattatagacttgcagtgtatattgttgt
gi|18 : taaacatgttagtattgtcaagtatggaagggaatttgcgctctttaattgaagatcaagagatcaattagtttcaattagtgcacttataatctcacagcaggaaaggacaagggagaggtggggtgggttagtgttagtggtggaggggggtgtagggggaTAAT--T-------------------------ATAACCG--CA----TAATTAT-G-AAAAAAATTGAGAC-------------A------------A--T-TAA-----------A-CA---ATATTTTCA----TGTA-TACTTCCATATT-TATTCAAATGCAATGCCATTA--TC-----------T--------------T--------------GTTTAATGACAAGTTT------A----AAAATAGTGAATTTAACATTTT--------TTG-----------------AAT--A-T-T---TTGTACCAGTCTAG------TATTA----AT-ACATGTTAG-ACTTCTGGT------------T-TA------T----------------------AT-TTTATGT-T----------TTT-TTA-----AATGTGGACGTAACAAATTAC---TCAATA-ATACTAAA-AATGGCTTATTTACTGTGT-------------GGCAAACATAACATAC-AAAGCAAAT--AAGACA----TG-TTTA-AAAC-TTCTTGTTCATATTGCAC-T-ACGTTCAAG-GTGAAATTTGACAT-AAA----------GAC-------------CGA----AAAGTTCGAG--AGAAA--C-T---T-TAGACGGGATCTGAA-AAGAAAAATAT-A-TTTTTTCTGT-AC-TT-TGATATTAC---CC-ACACCTCTGTTTAAGATTTTAAtacacattatattatagacttgcagtgtatattgttgt
gi|19 : cATTTCTATATAACATT-AAACCCCATACAATTA--TCACATTTAATAGCAAG-----------C--------------AT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--A-T-T---T-GTACCAGTCTAG------T--TA----ATCAAAT-GAAG-TCTCGCGGT------------T-TA------A---------CT-------A-AATG-TTT-TGT-T--------G-TTT-TCC-----CATTTGGAA---------TAC---ACAATA-ATACACAA-AAGGGTTTATAAACTGCATTTATTTGAT----AGAAATCGTAAAATAT-AAAGCATGT--AAGACA----TG-GTTA-AAAC-TTCATGTGCTTTTTGCAC-T-TTGTTCAAG-ATGATAGTCATCAG-AAATACTGTTGTCGACTGGCCTTTGTTGACTATCGCAAAGTTTGGG--GGAAG--C-T---C-T-GACGAGACCTGAA-AAATATATT-T-T-TTTTATATAT-AC-AT-TAGTATAAT---AT-GCACCCCTGTTT
gi|2 : ATTCATCAAAACCCTCAAAGTCATCTGCTTCGATGTCGTTGTC-AAGCAACGGTAACAGGTTCTCAACCCCTTCTC-ACCCACCAGGTTCTCAACACCTGC-TCAAACATGTCACTT-T---TGCCACT-----TGTCAAACGGTATCTGCACTCTTTTAATT----CAGGATCA--AAGAGATGTCACTTAATTTCAATTAACAGAGTGATAATCC-GACCACAGTAA------AGGACGA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGT------------GCC---CC-TGA------A-----CACC------TGCAC---A--ATTT---T---------TT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TA-ATTTTAATCAATAAACTGATAATAAT--T-------------------------AT----T--AG----TAATTGT----AAAAAAT--------------------------------A--G-TAA----------TATCA---ATATTTTCA----TAT----TTTTTTTATTTCATT-AAACCCCATACAATTA--TC-----------C--------------G--------------GT--------------------t
gi|24 : cagatgatattcaacaggtaggtactaaataaaacattctgttattagattagattatatgattccacaaagttgaaaactcttcaaatttaaaataattgagtgaaatcttataattactgtatttcccaagtataatccgcaggtgattttgaagccaaaaactggtggaaaaaaagctagcgtacgtctattatccacaggcataagttgtttactacatctgccattttgaaatctggaccaaaatgaaagattagttttgatatttttggagtaacaaaatctagactggtgtactgcatgattttgtaaaaaacgtaggtaaaacgttttgatgtgatataaagtgtgctaaagacaataaaatttgcgagtataaaatggtgttactgtaatttatgtgtatgtgtatttgggtaagtgcatcttttgagaaatattttggtcctaaaaaggggcaatcaccctctcactgtatctgcatcattcagcagtctctgatgtctg--------------GT--------------------G----AAAATAGTGAATT-------AT--------TTG-------------------------------TGTACCAGTCAAG------T--TAC---AT-AAAC---AG-ACTTCTGCTTTAAAGATCATGT-TA------A---------CA-------A-ACAG-TTT-TGTCT--------A-TTT-T-T-----CATTTGGAATTAATAAAATAC---ACAAAATATACTGAA-AATGGTTTATAAACTTTGTTTATTGAAT----AGAAATCATAAAATAT-AAACCATAT--AAAACA----TG-TCTA-AAACATTCAT-TGC--ATTGC-C-T---GTATACT-GTGAAAGTCCTGGGAAAATGCTttaatggcgagtataaaaat
gi|24 : AAAGTCCTGG--GAAAATGC-T---T-CAGACGGGACC-------ATA-----T-A-TATTTTCTGTTGT-CTATAGTTTAAC---CT-GCACCCCTGTTTA--ATCTTAAAA--ACtcagacgggaccatatatattttctgttgtctatagtttaacctgcacccctgtttaatcttaaaaac
gi|25 : gtgaaaatagtgaattatttgtgtaccagtcaagttacataaacagacttctgctttaaagatcatgttaacaaacagttttgtctatttttcatttggaattaataaaatacacaaaatatactgaaaatggtttataaactttgtttattgaatagaaatcataaaatataaaccatataaaacatgtctaaaacattcattgcattgcctgtatactgtg----AAAATAGTCAATTGAACAGAAT--------TTG-----------------AAT--A-T-TCTTTTGTTCCAGTCTAG------T--TA----CT----T----GTACTTTCAGT------------T-TA------A----------------------AT-TTTATGT-TTTATAAAAG-TTTATCCTTATTCATTTTGAAGTTACAAAATAC---ACAAAA-ACACTAAA-TATGGTTTATAAAC-GTGTTTATT---T----A---ATC------TAT-AAA-CATAT--AAGACA--------------AC-TTCCTGTGCATATTGCAT-T-ACAT----GTATGTTCGCAGTGAA-AAATGTTG--------TAGCA------GACGATTGTAAAATTAAGG--GAAAA--CTT---T-T-GACGATACCTGAA-GAAAAAAA----A-----TTCTAT-ACTCT-TAGT
gi|26 : tCCAGTTTCGG-CTTTAAAATCACCTGCGG--ATTA----TACTTGGGTGCGGTTTATAATG-GGAGATT-TACGGTA
gi|27 : atttaagttagattttataataaagtcactcttgaagcctcgtgaagtgatttttaaactttttttacattgacTACACCAGTCTAGATTTTGT--TACTCCAT-AAATAA--------CCAAT------------CATA------ATTG------CA-------A-AAAG-TTT-TGT-T--------G-TTT-TCC-----AATTTGGAAGTTACAGAATAC---ACAAAA-ATATACAA-AAGGGTTTATAAACTGTGTTTATTAAAT----AGAAATCATAAAGTAT-AAAGCATGT--AAGACA----TG-TTTA-AAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTCAAG-tcgaaaaaagctaatatccgttcataatctgcaggcatgaatcagatgaatcagttgttaactacatctgccattttgacatccggaccaaagtgaaagatgaattttgattggctaattatggagtaacaaattt
gi|29 : ctcgcaaattttattgtctctaacacactatatatcacatcaaaactttttacctactttttttacgaaataatgcagATGTGAAAACAGCAAAATATGTGAAAACA-GTA--AAA-AATGGTTTA---ACAGTGTT-GTTAATTTTTTAGTTATCGTAAA-TAT-AAAACCTAT--AAGGCA----TG-TTTA-AAAC-ATCCT-T-CATATT---C-T-TCATTTACG-GTAAAAATCGCCAG-AAATGCTGTTGT
gi|3 : tgtcttttttgttttggaagtagcaaaatGGAAGTTTTATTTTAATTTCAAATGCTATATTATATTTTGTTTA------------CATTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-ATCAAAACCCTCATAACCATCTCCTTTGTTATCACTG-CCGAGCAACTATAACACGTTCTAAACCCCTTTTC-ACCAACGAGGTTCTGAACACCTAC-TCATTGGTGTCACTA-T---AGACACT-----TGTCAAACAGTATTTGTGCTTTTT-AATT----CAAGATCA--AAGAGATGCCAATTA----------ACAG--TGATATTCC-GACGGCAGTAA------AGGACAA---AGAA----GGTACAAGTGGG-CGGA--GTCA-------A-------------A-TAAGC------------GTT---GC-CGA------A-----CACA------TGCAC---A--ATTT---T--------GTT----C--TTCCGA--AGTTC---T------AAATTT-GTTTTGTGT-CA-TTTTTAATCAATAAACCGGTAATAAC--T-------------------------TT----T--CA----TAATTGT-A-AAAAAAA--GCAATACAT---------A------------ATTG-TAA----------AA--A---ATAGT--AA----TATA-TATTACATTAT--CATT-AAA----AGGCGAGT----------------------------------------------GT--------------------A----AAAACAGCAAATTTAACAGAAT--------TTG-----------------AAT--A-T-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TA------G---------TG-------A-AAAG-TTT-TGT-T--------G-TTT-TTC-----CATTTGGAAGTTACAGAATAC---ACAATA-ATACCAAA-AAGGGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATAT-AAAGCATGT--CAGACA----TG-TTTA-AAAC-TTCATGTGCTTTTTGCAA-T-ACGTTCAAG-ATGATAGGCATCAG-AAATACTGTTCTTGACTGGCCTTTGTTGAGGATCACAGTGTTAGTA--GGAAA--C-T---C-T-GATGAAACCTGAA-AAATAGAAT-T-ATTTTTTTCTAT-AC-CT-TAGTATAAT---AC-AGACCCCAGTTTTAGACTTTTAAA--ACTTG-GG--AAAA----AACT-----GCCGATAATAATC-ATAGATT-AACGGTAagtcgagcattaacttctgacggaacaaaatatatttttctgtactcctacctctttttttaataccttaaaact
gi|30 : ----AGAAATCATAAAATAT-AAAGCATGT--GAGAAA----TG-TTTA-AAAC-TTCCTGTGCTTTTTGCAC-T-ACGTTCAAG-ATTATAGTCATCAG-AAATACTGTTGCCGAATGGCCTTTGTTGATGATCACAAAGTTTTGG--GGAAA--C-C---C-T-GACAAGACATGAA-AAAAAAAAA-A-A-AAAATTCTAT-AC-AT-TAGTACAAC---AC-GCACCC--GTTTTAGACCTTAAAA--TCTTG-GA--AAAA----AACT-----GCAGATTATAATC-CTATTTT-TATGGTAa
gi|31 : CAGAAT--------TTG-----------------AAT--A---T---TTGCAACAGTCTAG------T--TA----GT-AAATAGAAG-ACTTCCGGT------------G-TA------A---------TG-------A-AAAG-TTT-TGT-T--------GTTTT-TCT-----CATTTGGAAGTTACAGATTAT---ACAATA-ATACCAAA-AAGGGTTTATCAGCTGTGTTTATTAAAT----AGGAATCATTAAATAT-AAAGCATGT--AAGACA----TG-TTTA-AAAC-TTCCTGAGCTTTTTGCAC-T-ACGTTC-----TGATAGTCATCAG-AAATACTGTTGTCCACTGGCCTTTGTTGAta
gi|33 : AATAT-AAAGCAAGT--AAGACA----TGTTTTA-AAAT-TTCC-GTGCTAATTGCAG-T-ACGTTCAAG-ATCACAATCGTCAG-AAATGCTGCTTTTGACC-GCCATTGTTGAC-ATCG-ATAGTTTGGG--GGAAA--CTT---C-C-GACTCTACCTGAA-AAATATAAT-T-A-TTTTTTCTAT-AC-TG-TAGTAT---------GCACCCCTGTTTAAGACCTTAAAA--ACTTT-GG--A
gi|35 : C-GACAGCAGCAA------AGGACGA---GGAA----AGTACAAGTGGG-CGGA--GTTA-------A-------------A-TTGGC------------GCC---GC-CGA------A-----CACC------TGCAC---G--ATTT---T--------CTT----G--TTCCAA--ATTTT---T------AAATTC-GTTTTGTTT-TA-TTTCTAATCAATAAACTGATAACAAT--T-------------------------AT----A--CA----TAATTGT-A-AAAAAAAT-GAAATTCAT---------AATTGTAAAAAATA--G-TAA----------TATCA---ATA-TTTCA----TATA-TAtttttttttaattgcagttcaacaaaacaaaaat
gi|36 : GGGAATTCTATTTTCATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATCAAAACCCTCAAAATCATCTCGTTC-----------C-AAGCAACGATAACACGTTCTAAACCACTTCTC-ACCAACGAGGTTCT
gi|37 : GAAATTTTATTTTAATTTCAAATGCTATAT-ATATTTTGTTTATGGTAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT-ATC-AAACCCTCAAAATCATCTCCTTC-----------C-AAGCAACAACAGCACGTTCTAAACCCTTTCTC-ACCAACGA
gi|38 : TATTAAATT-AAACAC-ATACAATTACCTC-----------C--------------CTTCAAATGAAAAGTAT--------------------A----AAAATAGTGAATTGAACATAAT--------TTG-----------------AAT--A-T-T---T-ATACCAGTTTAG------C--TAT---AT-TAATAGTA----TTCCAGT------------T-TA------AAATTTATGTTG-------ACAAAGATGT-TGT-C----------TTT-TCA-----CATTTAGAACCAACACAATAC---ACA---------AAA-ATTGGTTTAAAAACT
gi|39 : TGATAATCT-GGCACCAGGAA------AGGATAATGTGGCA----GACTCAATTTGG---AA--ATTAGC-----A-------------A-TTTACT-----------GCTTTTGCATGATG----A-----CACT------TGTGC---A--TTTTAAAT--------TTT----GGTTGTCAAGGATTTT---T------AAATTTTGTTTTGTTT-TA-TTTTTAATCCATAAATTGAT-----T--T-------------------------AC----TAGCAATGGTAATTAT-A-AAAt
gi|4 : GTTTCCAACACCTAC-TCAAACATGTCACT-------------------------CAGTATTCGCACTCTTT-AAAT----GAAGATCA--AAGAGATGTTGATTAGTTTCAATTAACAGTGTTATAATCG-GACAGCAGGAA------AGGACCA---GGAA----AGGACAA-TGGG----A--GTCA-------ATTTTGTAAATGAAA-TTTACT-----------GCC---GC-CGA------AAATGACACCGTCC--TGTAC---A--ACACA--T--------CTT----T--T---AA--ATTTTGGTTGGCCAAAAATTT---TTTA-AT-TAGTTTTTCATCCATACATTAAT--TAACCGT-------------------------AT----T--CA----TAATTAT-A-GAAAATAT---AAT---T---------A------------A--GACAA----------TGCAA---GTGTTTCCATAATTATA-TGTTTCCATATTAAATT-GATCACCATACACTTG--CG-----------CTGTTTAATGACAAGC--------------GT--------------------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--A-TAT---ATATACAAGTCTAG------T--TT----AT-AAAT---AG-ACTTCTGGT------------T-TATACTTTA---------CGTTTACGTA-AAA---CT-GGC-C--------T-TTT-TGA-----TATTTGNNNNNNNNNNNNNNN---NNNNNN-NNNNNNNN-NNNNNNNNNNNNNNTG---ATATT---T----GGAAGTAATAAAATACAAAAAAATACTAAAAACA-----G-TTTATAAAC-TTc
gi|40 : aatgcattttttattcagatatctttggatgatctgattgtaatagttgatgcattatgatcatattaatccagtggctgtacaaatttattgtcaatgtaattccatctttattaatgttcattaaacaatgaaatcataataagagatgtgttcacacttcactctttatgaacttagtattaccattcacagtgtacaaccgttagaatgataacatTTGTAAAAGATTAAAATGTTTGGGAGGGAAA--A-TGTCC-T-GACTA--CCTGAACAAATAAAAT-CCA-TTTTGTCCAT-AC-TC-TAGTTTAACCTAACTGTAACCCT--TTAGGAC--TAAAA--ACTTA-AA--AAAAGAAAAACT-----GCCGGTTATAggtaacatgtaactttggctgaatctatcatgtaaagtct
gi|42 : taccggaaatgctgGTTGATGACTGAAAAGTTTGGG--AGAAA--C-T---TAC-AACGA------------TAAAATAT-A-TTTTTCCTAT-AA-TC-TGATATTGC---CC-GCACCCTTGTTTGAGACCTTAAAAT-GTCTG-GGGCAAAA----AAC------ATGGGTTATAGTCTGCAGATT-
gi|43 : A---ATATTTAAAA---TATA-GATGTCCATATCGGATT-AAGTACTATAAAATCA--TC-----------C--------------T--------------TTTTAATGACA-----------AGTTTAAAATAGTGAATTGAACAGAAT--------TTG-----------------AATAAA-C-T---TTGTTTCAGTagggttacagatg
gi|44 : aaaagaggacaataattacaaaa--------------C--------------GT--------------------A----AAAATAATAAATTTAACAGAAT--------TTG-----------------AAT--A-T-T---T-GCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCCGGT------------T-TA------G---------CA-------A-AAAG-TTT-TGT-T--------G-TTT-TCC-----CATTTAAAAGTTACAGAATAC---ACAATag
gi|45 : gagGATCAGAAT--------TTG-----------------AAT--A-T-T---T-GTACCAGTCTAG------T--AA----AT-AAATTGAAG-ACTTCCAGT------------T-CA------G---------CA-------A-AAAG-TTT-TGT-T--------G-TTT-TCC-----CATTTGGAAGTTACAGAATAC---ACTATA-ATACACAA-AACGGTTTATAAAta
gi|47 : TTCTCAACATCTAC-TCAAACGTGTCACAA-T---TGCCACT-----TGTCAGATGGTATTCACACTCTTT-AATT----C---------AAGAGATGTCAATTA--TTAAAT-------GTGATAATCG-GAC
gi|5 : CCTCTTCTT---CGACA--GTTCTCATTGCCTAC-TCAAACATATCACTA-TATTTGTCCCT-----TATCAAACGGTATTCACACTCTGT-AATT----GAAGATGATGAAGAGATGTCGGTTAGTTTCAATTAACAGAATGATAATCT-GACAGCAGGAA------ATGACTA---GAAA----AGTACCAGTGGG-CGGA--GTCA-------ATTTTGTA------A-TTGGCTTGCAATTTACTGCC---AC-AAA------A-----CATC------TGCCC---A--ATTT---T--------GTT----G--TCCCAG--ATCTT---T------AAATTT-GTTCTGTGT-TA-TTTTTAATCAATAAACTGATAATAAT--TATTCATAATTATAAAAAAATTGTAAAT----T--CA----TAATTGT-A-AAAAATAT-TAA--T--T---------A------------A--GACAA----------TATAA---ATATTTTCAA---TATA-TATTTCTTTATTACATT-AAACACTATATAATTG--TC-----------T--------------C--------------ATTTAATGACGAGCAA------A----AAAATAGTGAATTGAACAGAAT--------TTG-----------------AAT--A-T-T---T-GCACCAGTCTAG------T--TA----AT-A----GCAG-ATTTCTGGT------------T-TA------A---------TG-------A-AAAG-TTT-TGT-T--------G-TTT-T-T-----CATTTGGAAGTAACAGAATGC---ACAATA-ATACCAAAGAGTGGTTTATAAACTATGTTTATTAAAT----AGAAATCATAAAATAT-AAAATATGT--AAGACA----TT-TTTA-TAAT-TTCCTGTGCTTATTGCAC-T-TTGTACAAG-ATGGTAACCGTCAG-AAATGCTG--------------TTGTTGATGATCGCAAAGTTTGGG--AGAAA--C-T---C-A-GGCAAGACCTGAA-AAATATAAT-T-A-ATTTTTCTAT-AC-AC-TAGTATGAT---AG-GTACCCCAGTTTTA
gi|53 : cacgtcGGTTCTGAACACCTAC-ATACAAGTGTCACTA-T---TGA-ACT-----GGACAAATGGTATTCGCGCTTTTT-AATT----CAAGag
gi|54 : A-TATTTCCATATTAAATT-AAATACCATACAATTA--TC-----------C--------------T--------------GT--------------------
gi|55 : GGAATTTGCTATCTTT-AATT----GAAGATCA--AAGAGATGCCAGTTAGTTttgatgaca
gi|57 : agGGAAATTTTATTTTAATTTCAAATGCTATAT-ATA
gi|6 : CCACT--------CAA---GTATTTATGCTTTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTTAATTAACAGGGTGATAATCC-AACAGCAGTAACTGTTAAGGACAA---AGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------ATT---GC-CGA------A-----CACC------TGCAC---A--GTTT---T--------GTT----G--TCCCAA--AGTTT---T------AAATTT-GTTTTGTGT-TA-TTTTTAATCAATAAACTGATAATGAT--T-------------------------AT----T--CA----TAATTGT-T-AAAACAAT-GAAATTCATAATTGTTAAA------------A--G-TAG----------TATTAGCTATATTTTCA----TATA-TAATTCTTTATTACATT-AAACACCATACAATTA--TC-----------CTGTTTAATGGCGAGC--------------GT--------------------G----AAAATAGTAAATTTATCAGAAT--------TTA-----------------AAT--A---T---TTGCACCAGTCTAG------T--GA----AT-AAATAGAAG-ACTTCGGGT------------T-TA------G---------CG-------A-AAAG-TGT-TGT-T--------G-TTT-TCC-----CATTTGGAAGTTACAGAATAC---ACAATA-GTACCAAA-AGGGGTTTATAAACTTTGTTTATTAAAT----AGAAATCATAAAATAT-AAAGCATGT--AAGACA----CG-TTTA-TAAC-TTTGTGTGCTTTTCGCAC-T-ATGTTCAAG-ATGATA--------------CTGTTCTCGACTGGATTTTGTTGGCGATCCCGAAGTTTGGG--GGAAA--C-T---C-C-GATAAGACCTGAA-AAA-AAAA----A-TTTTT--TAT-AC-CT-TAGTATAAT---AC-GCACCCCTGTTTTGGACCTTAAAA--ACTTG-GG---GAA----AACT-----ACGGATTATAATC-ATATTTT-TACGGTAc
gi|7 : caaacCATCAACACTCTCAAAGTCATCTCCTTCAATGACGCTG-
gi|8 : gcatgtaatttatgcacaaatggtttaacacacaggcactggtcacaatttttttttttagtatatttggtcatatagtatctatatagtagactggtcacaaactctttttttagtatattaaaattatggtcatgtagtaccgtattttcccaattataatctttactcaagtataatccgctggtgattttgaaagcaaaactggtgggaaaaagatagtatacatctattatctgcaggcatgaatcaattgtttacctcatccgccattttgaaattcagaccaaagtgaaagaagaatttggattggttcttcatggcgtaacaaaatcaatactggtgtactgcataattttgtaaaaaaacgtaggtgaaatgttttgatgtgatatatagtgtgttggagacaataaaatttgtgaatataaaatggtgttaccataattacttttatgtgtatttgggtaagaaaaagtgaaaataaaaacaaactattgacaatttttttaaatgcatctttcgagaaatatttggaccatcaccctttcactgtaattgcatcattcagcagtctctaatgtccgatgAATGATAACAAGTTCTAAACACCTTCTC-Atcc
gi|8 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttAAGTTCTAAACACCTTC-TCAAACGTGACACAA-T---TGTCAAG-----CACCAATTGGTATTC-TACTCTTT-AATT----GAAGATAA--AATAGAT---AATAAGTTTCAATTAACAGCGTG----TCCTG-----AGGAA------AGGACAA---GGAGGCTTAGT-CAATTTTG-T-AATTGTCATGG----A-------------ACTTCTT------------GTC---GC-CAAACAATGA-----CACC------TGTACATAA--ACTT---TAAATTATGTTT----G--TCTT-A--GTCTT---T------AAACTT-GTTTTGAG---A-TTTTTAATCCTTAAACTCAT-----T--T-------------------------AT----T--CA----TATTTAT-ATATAAAAA---AAATCC------------------------A--A-CAA----------TACAA---ATATTTCCA----T----------TTTA----ATT-AAACACCATACACTGA--TC-----------CCATTTAATGATAAAC--------------GT--------------------A----AAAATAGACAAATGAACAGAAT--------TTG-----------------AAT--A-T-aacgtgacacaattgtcaagcaccaattggtattctactctttaattgaagataaaatagataataagtttcaattaacagcgtgtcctgaggaaaggacaaggaggcttagtcaattttgtaattgtcatggaacttcttgtcgccaaacaatgacacctgtacataaactttaaattatgtttgtcttagtctttaaacttgttttgagatttttaatccttaaactcatttattcatatttatatataaaaaaaatccaacaatacaaatatttccattttaattaaacaccatacactgatcccatttaatgataaacgtaaaaatagacaaatgaacagaatttgaatatgtgta
gi|9 : aaatgcattttttattctgaaactagtagccttggatgatcagattgtaattgttaatgcattatcgtattaatccagagcatgtttattgattggggatcaatgttattatgttttttttaatgttcaattaactataaatacataattagatatgtgttcactctttgtgaactagcgtttgcctttcaccgtttactaccgtttaatgataacACTCATCAAAACCCTCAAAGTCATCTCCTTCGATGTTGCTG----AGCAACAAGAATACATTCTAAACCCCTTCTC-ACCGGCAAGGTTCTCAACATCTAC-TCAAACGCGTCACTA-C---TGCCACC-----TGTCAAACGGTACTCCCACTCTTT-AATT----CAAGATCA--AAGAGATGTCAATTAGTTTCAATTAACAGAGTGAAAAACT-GACATCAGTA------------AA---GGAA----AGTACAAGTGGG-TGGA--GTCA-------A-------------A-TTGGC------------GCC---AC-TGA------A-----CACC------TGCAT---C--ATTT---T--------CTT----G--TCCCAA--ATTTT---T------AAATTT-GTTTTGTGT-TT-TTTTTAATCAATAAACAGAAAATAAT--T-------------------------AT----T--TA----TAACTGT---AAAAAAAT-GAAATTCAT---------A------------ATTG-TAA----------gtgta
15 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATTTACCTTTATGTATATTCATTAAATTTTGATACTGCTTTACCTATTTTTGTCAGAGTTGAACTTAATACAGTATATCTCCAGTTATATTCCGCACTGGAGTATAATCTGCAGGTTATTTTGAAGCCAAAACTAGTGGAAAAAAGCAAGTATACGTTTATTATCCGTAGGCATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGACAAAAGTGAAAGATGAATTTTGATTGGTTATTTATTGAGTAACAAAATCTAGACTGGTGTACCGCTTAATTTTGTAAAAAACTTCGGTAAAACATTTTGATGTGATATATAGTGTGTTAGTGACATAAAACTTGCGACTATAAAATGGTGTTATTGAAATATCTTTATGTGTATTTGG
Unaligned ( gi|21 ): TCCTGATGCTTCTTCTAAAATGGTTATACCAAAATAGTTTTTTGCAAATTGGGGTACCGTATATCGCCAATTATAAACCGCACCCAAGTATAATCCGCAGGTGATTTTGAAGCCGAAACTGGTCGAAAAAAGCTAGTATCCGTCTATAATCCGCAGGCATGAATCAGCTGAACCAGCTGTTTACTACATCTGCCATTTTGAAATCCAGACCAAAGTGAAAGATGAATTTTGATTGGCTTATTATGGAGTAACAAAATCTAGACTGGTGTACTGCATTACTTTGTAAAAACATAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGAAAATTTGCGAGTACCAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGGG
Unaligned ( gi|22 ): TGACCCTAATTTTACTCTATTTCCAAAGTATAATCCGCACTTGAGTATAATCCGCAGGTGATTTTGAAGTGAAAACTAGTGGAAAATTGCTAGTATACATCTATTATCTGCAGGCATGATTCAGTTGTTTACTACTTCTGCAATTTTGAAATCCTTACCAAAGTGAAAGATCAATTTTGATTGGTTATTCATGGAGTAACACAATCTAGACTGGTGTGCTGCATGATTTTGTCAAAAACGTAGGTAAAATATTTTGATGTGATATATATAGAGTGTACTTCAAAATCCCTATGGCTCAAAAATGACATGGTACTCAAAATCCCCTTGATGGGTGGCAT
Unaligned ( gi|23 ): AATCTCCAAGTATAAACCACACCCAAGTATAATCTGCAGGTGATTTTGAAGCCAAAACTGGTCGAAAAAAGCTAGTATCTGTCCATAATCCGCAGGCATGAATCAGATGAATCAGCTGTTTACCACATCCATCATTTTGAAATCCCAACCAAAGTGAAAGATGAATTTTGATTGGCTAATTATTGAGTAACGAAATCGAGACTGGTGTACTGCATAACTTTGTAAAAACGTAGGTAAAACGTTTTGATGTGATGTATAGTGTGTTGGAGACAATAAAACTTGCAAGTATAAAATGGTGTTACCGAAATTATTTTTATGTTTGTGTATTTGG
Unaligned ( gi|28 ): ATTTATGTTTATTTATAGGTTATTTATTCCTGGTCATATTTTTTTTGTTTTTAAAGGGAATATACCATAAATCTCCTATTATAAACCGCACTCAAGTATAATCCGCAGGTGATTTTGAAATCGAAACTGGTCGAAAAAAGCTTGTATACGTCTATAATCCGCAGGCATGAATCAGATGAATCAGTTGTTTACTACATCCGCCATTTTGAAATCCGGATCAAAGTGAAAGATAATTTTTGATTGGCTAATTATTGAGTAACAAAATCTAGACT
Unaligned ( gi|32 ): ACTACCGTAATCGTTTGATTATACCCCTTTGCCAAGTATAACCTGCAGGCTAATTTTGAAGCCAAAACTTGTGAAAAAAAAACTTATATCCATGAATAATACGCAGTTGTTTACTACTGCCGCCATTTTGAAATCGAAAGACAAATTTTGATTGGCTAGATTTTAAGTCACATAATCTAGACTGGCATACTGTTAATTTTGTAAAATCACATGTGATAACTACTATTAAATATTTTGTGTAA
Unaligned ( gi|34 ): TTTTAATTTAGACTTTATGTCATACTTTTGACAAATAACCACAGACCCTGGACTTTTGATTTTAACATACAGTAATCTTCCAATTATAACATGCCACCAAGTATACCCCGCATGCTGATTTTGAAGACAAAATTGGTGGAAAAAAGTAAATATATATCAATTATACACAGCCATTATATCTTCAAATCCAAATCTGTTCGCCATTTTGA
Unaligned ( gi|41 ): CTTTGATCTCTCGAATAAAAGTCTCCTCAGAGTATCACAGACTGATTTTGTATCCAAATCTGGTGGAAACATAGCTCTTGTATCCTGGCATATCACACAGCATGAAATTGAGAGTTTACCATGGCCACCATTTTAAAATCAATACAAAAG
Unaligned ( gi|46 ): CACGGTGAAATTCACCAGAAATGCTATGGTTGATGATCGAAAAGTTCGGAAGAAATGATGTCGGGATCTGAATAGTTAGATATATTTTTGATATTCTAATGATACCTTAAAAAATTTAAGAAAA
Unaligned ( gi|48 ): ATGCAATTCAGTCTTTATTCATGTTCAATTAGTTATATAAAAAAAATTAGATATGCGTACACTCAACTAGTATTTACTGTTGATTGTTACTACCAT
Unaligned ( gi|49 ): GACTATTGCTTATTTTTTTATAAAAATATACCGTAATATTGCAAATATAAGACACCCCAAAGTATCACCTGCAGGCTGATTTTGAGGCAAAGATAA
Unaligned ( gi|50 ): ACTATTGGATAAAATATAGGTAAAACATTTTGATGTGATATATAGTATGTTAGAGACAATAAAACTTGCGAGTATAAAATGGTGTTACCGA
Unaligned ( gi|51 ): GCAGTTCAGCAAAACAAATGCGAGTTGAAAATATTTGCATAGGTTAAAAAAAGCCAGTGGATTAAAAAGTTAAAATTCTACCCCTG
Unaligned ( gi|52 ): ACTACAGTATTTCGCAAATTATAATCTGCACTCGAGTACAATCTGCAGGTGCTTTTGGAGCCAAAACTATTGGATAAAAT
Unaligned ( gi|56 ): AAATCCCCATGGCTCAAAAATGACAAAGTAGTCAAAAT