lowQualScore : 1111111111111111111111111111111111111
lowQualScore : 11111111 55555555555555555555555555555555555555555555 222222 4444444 222 33333333333333333333333333333 44444444444444444444444444 1 55555555 11111111111111111111 555555555555555555 1111 33333333 11 111 111 3333333333333 11 44444444444444444444444 222222222222222 11 222222222222222 111111111111 111 1111 11 22222 33333333 2 2 22 1111 111 333333 1 1 3333 2222 1 0000000000000000000000000000000000000 11 222 2 2 4444 8888888888
lowQualScore : 66 0 4 66 11111111 3 33 2 88888888888888888888888888888888888888888888 2 4 2 33 55555 777777 2 666666 0 1111111 2 555 55555 444 4444 2 22 6 66666666666666666666666666666 2 2 33 77777777777777777777777777 888888 3 44444444 88888888888888888888 44 444444444444444444 6666 1 55555555 88 555 111 111 8888888888888 22 9999 0 1 3 88 7 44444444444444444444444 888888 999999999999999 00 2 999999999999999 777 333333333333 3 6 6 222 5555 22 1 33333 8 0 22222222 8 0 8 8 6 0 0 6 44 8 2222 1 555 6 888 6 444444 5 0 1 6 5 0 8888 4444 1 3 7 6666666666666666666666666666666666666 88 333 2 0 6 8 2222 4 0000000000 6
lowQualScore : .. . . .. ........ . .. . ............................................ . . . .. ..... ...... . ...... . ....... . ... ..... ... .... . .. . ............................. . . .. .......................... ...... . ........ .................... .. .................. .... . ........ .. ... ... ... ............. .. .... . . . .. . ....................... ...... ............... .. . ............... ... ............ . . . ... .... .. . ..... . . ........ . . . . . . . . .. . .... . ... . ... . ...... . . . . . . .... .... . . . ..................................... .. ... . . . . .... . .......... .
lowQualScore : 99 5 0 99 88888888 1 77 7 66666666666666666666666666666666666666666666 2 4 2 11 66666 444444 2 444444 6 0000000 1 888 33333 111 5555 0 88 2 22222222222222222222222222222 7 7 77 00000000000000000000000000 222222 6 33333333 99999999999999999999 33 999999999999999999 7777 7 55555555 33 888 777 888 6666666666666 44 1111 5 2 6 44 3 11111111111111111111111 888888 555555555555555 33 2 555555555555555 777 777777777777 5 7 5 555 9999 77 0 00000 0 8 77777777 0 8 2 2 0 8 0 0 44 0 2222 0 555 0 444 2 444444 4 8 8 0 0 8 0000 0000 0 3 3 0000000000000000000000000000000000000 33 000 5 0 0 5 5555 0 0000000000 0
consensus : NNGTGACA--AATAAATAT--GGTAAANTGACT--A-AT--AT-ATA---TA-----C--GNCANAC------CGG-T-------------A-A-A-A--TAT-----AT-----TATACGT-T------ATGCAAACC-GTA-AA---AT-----ATAT-TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TA-T-A--TA--T--------TA-----T-------GCAA------ACAAAATATAT-TATA--ACGTTATGCACAC---------GA---------CCC-TTTTTGCAC-AC-GGCCCTCACTACC-ATTTTGA-GTACCACAGCTGA--TGTACGCTC--GAAACGCCTACGTCATTGA---TT---GTTG-CGTTC--TGCTCAGTCA-GACTATCGCA-A--CCGTCTTCGAAGC-TCCTTG-TTGAA----AG---------------AGAA------GATT----NT-----A---AGAGGTTCTTTAGGG----GGAGGTCGGAGATGGGAAATATAAA-A-TATTAAT-TAT----GT-GGAGTAGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGCAATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGA-GTCGGAGCGG-TAGGGTTGGGTGATGTGGCCCAATATTCCGAATTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAGATATCCCCTCGAACATTCGAAATGACTAAGCTGTCAGTTGATGNTCCACAATG---ACGGAT-TGCACC------CG-AAATG---C---AAATGC-A-TGTACTACTAT--ATATTTCTATATCAGATTATGCCNAATCGACGGATTGCACCATAAAGCGAANGGGTCT--AAATATGCAAATACTAAGT
Reference ( gi|2 ) : CCGTGACA--AATAAATGT--GGTAAACTGACT--A-AT--AT-ATA---TA-----T--GGCACAC------CGG-T-------------A-A-A-A--TAT-----AT-----TATACGT-T------ATGCACACCGGTA-AA---AT-----ATAT-TA----TACGT-TAT--GCACACCGGTA-A---A--A---------------TA-T-A--TA-----------TA-----T-------GCAA------ACAACATATAT-TATAA-ACGTTATGCACAC---------GA---------TCC-TTTTTGCACTAA-GGCCCTCACTATCGATTTTGATGTACCACAGCTGATTTGTACGCTC--GAAACGCCTACGTCATTGA---TT---GTTG-CATTC--TGCCAAGTCT-GACTATCGCA-A--CCGTCTTTGAAGC-TCCATG-TTGAA----AG---------------GGAA------GATT----CT-----A---AGAGTTTTTTTAGGG----AGAGGTCGGACATGGGAAATATAAA-A-TATTAAT-CAT----GT-GGAGTAGAACTACAATTTAGTCATTCAACTGTGTTTTATCGAGGAATAATAAAATGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGCAATGCAATA----T---TTT-TTAAGAAATATGTTTCAAAACGAAGACATATTTATTACCATAGGCATCAGA-GTCGGAGCAG-TAGGGTTGGGTAATGTGGCCCAATATTCCAATTTTTTTACATTCTTTTAAACCACACTTCTTAGTGCAAAATTGAAATATCTCCTCAAACATTGGAAATGACTAAGCTGTCAGTTGATGA---ACAATG---GCGAAT-TGCACC------CG-AAATG---C---AGATAC-ATTGTACTTCTAT--ATATTTCTATATCATAATATGTCCAAT-GGCGGTTTGCACC----AGCAAAAGGGTCTCGAAATA--AAAACACTAAGTTC
gi|3 : GTGACATAAATATATAT--GTTTAAGTAAAA--A-AT--AT-ACA---TT-----TTCGACA-ACAAAATATGG-T-------------A-A-A-C--TG------AC-----TATATATAT------AGGCAAATCGGTA-AATATAT-----ATATATA----TATGT-TAT--GCAAAC----A-A---A--A---------------TA-T-A--TA-----------TA-----TACATTATGCAA------ACAAAATATGT--ATA---CGTTATGCACAC---------GA---------CCC-TTTTTGCAC-AC-GGC-----------ATTTTGATGTACCACAGCTGATTTGTACGCTC--GAAACGCCTACGTCATTGA---TT---TTGG-CGTTC--AACTCAGTCA-GACTATCGCA-G--CCGTCTTTGAAGC-TCCTTG-TTGAA----AGTAAAGAATTTTAGAAGAAAAGAGATGATT----CT-----A---AGAGGTTCTTTAGTG----GGAGATCGGAGATGGGAAATATAAA-A-TGTTAACGTAT----GT-GGAGAAGAACTACAATTTGATTATTCAATTATGTT------------AATAGA-TACAT--AAT----AAAAAAA-GCCTT--CTTCTGTTGATGCAAAGCAATAAT--T---TTT-TTAAGAA-TACGTCTCGAAAAGAAAACATGCTGATCACCAAAGGCATGGGG-GTCGGAGCGG-TAGGGTTGGGTGAGTTGGTCCAATATTCCGATTTGTTTACATTCTTTT-AACCACACTTCATAGGGCAAAATTGAAATATCCCCTGTAACATTCGAAATGGCTAACATGTCAGTTGATGC---ACAATGACAGTAAATGTGT-CT------CA-ATATA---C---AG--------GTACTACTAT--ATATTTCTATATCAGATTATG
gi|18 : ctatgagaggtcaaacgtgactatattcaTGACA--AATAAATAT--GGTAAATTGACT--A-ATAAAT-ATA---TAT----T--AGCACAT------CAGTT-------------A-G-A-A--TAT-----A------TATACGT-T------ATGCA-ACC---A-AA---CT-----ATAT-TG-----ACGT-TAT--GCAAAC----------A--A---------------TA-T-A--T------------------------------------------ATATAT-TAT---ACATTAGACACTC---------GA---------CAC-ATTTTGCAC-AC-GGTCATTGCTACCTATTTTGATGTACTACAG
gi|1 : gttatatttacatcgtaatgcaatcgtatgaagccccaaacgtgattatattcagtgacataaatgaattatatgtgtaaaagtatacactctGACA--AATACATAT--AGTAAACTG-TTAAA-AT--AT-ATA---TA-----C--GTTATAC------------------------A-ATA-A--TAT-----ATG----TATACGT-T------ATGGACACCAGCA-AA---TT-----ATA--TA----TACGT-TAT--GCA-AACAATACA---A--A---------------CA-T-A--TA-----------
gi|12 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcGACA--AATAAATAT--GGTAAACTCAC-----AT------------------T--GGCACAT------CGG-T-------------A-ATA-AATTAT-----A------TATACGT-T------ATGCAAAC----A-AA---AT-----ATA--TA----TACGT-TAT--GCACACcgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|4 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcGACA--AATAAATAT--GGNNNNNNNNNN--N-NN--NN-NNN---NN-----N--NNNNNNN------NNN-NNNNNNNNNCAAACA-A-A-A--TAT-----AT------GTACGT-T------ATGCAGACCGGTA-gaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|13 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcACA--TATATATGTTTGGTAAA--------A-AT--AT-ATA---TA-----C--GTTATGC------AAA-C-------------A-A-A-A--TAT-----ATA----TATACGT-T------ATGCAAACCTGCA-AAT--AA-----ATA--TA----TACGT-TAT--GCACACCGGTA-A---A--AATATACATACCGGGGTA-T-A--TAAGT--------TA-----T-------GCAA------ACAATATATAT-------ACGTCATGCAAAC---------AA---------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|7 : atgactACA--AATAAATAT--GGTAAAATGACT--A-AT--ATAATA---TATATATT--GGCACAT------CGG-T-------------A-A-A-A--TAT-----ATAAATATATACGT-T------ATGCAAAA----A-AA---AT-----ATA--TA----TATGT-TAT--GCAAACC--TA-A---T--A---------------TA-TAA--TACTT--------TA-----T-------GCAC------ATGACaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|6 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaCA--AATAAATAT--GGTTAAATGACT--ATAT--TT-ATA---TA-----T--TATGT-T------CGG-T-------------A-A-ATA--TAT-----ATA----TATAcccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|1 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgGACA--A-AT--AC-ATA---TA---------GTAAAC------TGT-T-------------A-A-A-A--TAT-----AT------ATACGT-T------ATACA-------A-TA---AT-----ATATGTA----TACGT-TAT--GGACACCAGCA-A---ATTA---------------TA-T-A--TACGT--------TA-----T-------GCAA------ACAATACA-AA-CATAT-ACGCTACGattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttctcagaaagagcctacgttattgatttttggcgcgttctcatccagacgcgtatatcccttttcgaaacttttgacatatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|15 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctc--A-AT--AT-ATAA--TA-----T--GTTATGA------AAA-C-------------A-A-A-A--TAT-----AT------ATACGT-T------ATGAAAAC----A-AA---AT-----ATAA--A----TACGG-TAT--GCACAtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|21 : gcaaac--A-AT--AT-TTA---TA-----T--GTCGT-T------CGT-T-------------ACA-A-A--TAT-----AT------ATACGT-T------ATGCACACtgtctctttttcaaacgaccctgactaccaaaagctacgcctacgtcattgattgttttagtcagactttcgcaaccgtccttgaagctccttgttgaaagagaagaatctaagaggttctttacgggtgatcgtagatgtgaaatataacatattaattatgtggtgtagaactacaatttacttatttaattgtgttttatggatgaataataaagcgcacggatttaaaaaaaagcctttatttttgttgatgcaatgcaatat
gi|7 : aaatgtttttttagatatataaaggaaaatacaa--A-AT--AT-ATA---TA-----C--GTTTAA---------G-T-------------A-A-A-A--AAT-----AT------ACACCT-TCAACAAATAAATAT-GGTA-AA---ATGACTAATAT-AA----TATATATATTGGCACATCGGTA-A---A--A---------------TA-T-A--TAAATATATACGTTA-----T-------GCAA------AAAAAATATA--TAT---ATGTTATGCAAACCTAATATATAA---------TAC-TTTATGCAC-AT-GACCCgatcctttttgcacacggccctcattaccaatttttaagtaccataactgatatgtacgctcgaagcgcatacgtcattgattgttgccttctgctcaatcaaact
gi|12 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgta--A-AT--AT-ATA---TA-----C--GTTTAA---------G-T-------------A-A-A-A--TAT-----AT--------ACAT-C------CTCGACA--AATA-AA----T-----ATGG-TAAACTCACAT-TG---GCACATCGGTA-ATAAATTA---------------TA-T-A--TACGT--------TA-----T-------GCAA------ACAAAATATA--TAT---ACGTTATGCACAC---------GA---------CCC-caaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|5 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaT--AT-ATACGTTA-----T--G-CAAAC------------------------A-A-A-A--TATTTATTATA----TATACGT-T------ATGCATATCGGTT-AA---AT-----ATAG-TA----TACGT-TAT--GCAAAC----A-A---A--A---------------TATT-A--TATACAT------TA-----T-------ACAA------ACAAAATATATATACAA-----TATGCACAC---------GA---------CCC-caaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|11 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataatttT--AT-ATACGTTA-----T--GGAA-AC----------------------------A-A--TAT-----ATA----TATACGT-T------ATGCAAAC------AA---AT-----ATA--CA----TACGT-TAT--GCAAA--G--A-A---A--A---------------TA-T-A--TA-----------TA-----C-------Gccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|9 : at-------------A-A-A-A--TAT-----AA------ATACGT-T------ATGGAAACA---A-AA---AA-----ATAT--A----TACGT-TAT--GCACACttattcacaagaccccaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaaaaagtctacgtcatagatttttgtcgtgttcgcttccagacacgtgaaccccttttcggtgcttttgaatgacaaaaaatattgtaagagggtcattaggggaagtgggaaatgtaaactattaagtatattagagtagaaatataatttagttattaaatttttttatggatgaataatcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|21 : ttatgaaaac-------------A-A-A-A--TAT------T-----TATATGT-C------GT-----TCGTTACAA---AT-----ATAT--A----TACGT-TAT--GCACACgacccttttttgaacacggccctcatgaaatgcctacgtcattgaatgttgtgttctgctcagtcagactatcgccacagtatttgaagctccgtgttgaaagagaagatcattagaggttctttagggggatatcggagatgggaaatataaaatattaattatgtggagtagaactacaattttatggatgaaaaatacagcgcacggaattaaaaaaaacacctttacttgtgttgatgcaatgcaatatacttttaagagatagtctcgaaaggacatgtctatcaccataggcatagccgccggagcgttagagttaatgatgtggccctatattccgaatttttgacattatttaaccacacttcctatggcaaaagagatatcccctcaaacattcgaaatgactaagctgtcagt
gi|25 : aaatgtttttttagatatataaaggaaaatac-------------A-A-A-A--TAC-----AT------ATACGT-T------ATGTAAAC----A-AA---AT-----ATA--TA----TACGT-TAT--GTAAACgatcctttttgcacacggccctcattaccaatttttaagtaccataactgatatgtacgctcgaagcgcatacgtcattgattgttgccttctgctcaatcaaact
gi|11 : aac-----TATACGT-T------ATGGAAAC-------A---AT-----ATATATA----TACGT-TAT--GCAAAC------A---A--A---------------TA-T-A--CA-----------TACGTTAT-------GCAA------AGAAAATATAT--ATA---CGTTATTCACAA---------GA---------CCC-aa
gi|4 : attaA-AA---AT-----ATAT--G----TACGT-TAT--GCAGACCGGTA-caaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaaaaagtctacgtcatagatttttgtcgtgttcgcttccagacacgtgaaccccttttcggtgcttttgaatgacaaaaaatattgtaagagggtcattaggggaagtgggaaatgtaaactattaagtatattagagtagaaatataatttagttattaaatttttttatggatgaataatcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|25 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcgacaaataaatatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaacA-AA---AT-----ACAT--A----TACGT-TAT--GTAAAC----A-A---A--A---------------TA-T-A--TATACGT------TA-----T-------GTAA------ACAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|15 : aacA---AT-----ATAT-AA----TATGT-TAT--GAAAAC----A-A---A--A---------------TA-T-A--TA-----------TACGTTAT-------GAAA------ACAAAATATA-----AATACGGTATGCACAT---------G----------TCT-CTTTTTCA--AACGACCCTGACT--------------ACCAAAA-----------GCT------ACGCCTACGTCATTGA---TT---GTT----TT--------AGTCA-GACTTTCGCA-A--CCGTCCTTGAAGC-TCCTTG-TTGAA----AG---------------AGAA------GAAT----CT-----A---AGAGGTTCTTTACGG-----GTGATCGTAGATGTGAAATATAAC-A-TATTAAT-TAT----GT-GGTGTAGAACTACAATTTACTTATTTAATTGTGTTTTATGGATGAATAATAAAGCGCACGGA--TTTAAAAAAAA-GCCTTTATTTTTGTTGATGCAATGCAATA----T---
gi|9 : gcaaacT-TAT--GAAAAC----A-A---A--A---------------TA-T-AAATACGT--------TA-----T-------GGAA------ACAAAAAA-AT--ATAT-ACGTTATGCACAC---------GA---------CCCTTTTTTGAAC-AC-GGCCCTCA
gi|21 : A-A---A--A---------------TA-T-T--TA-----------TA-----T-------GTCGTTCGTTACAA-ATATA--TAT---ACGTTATGCACAC---------GA---------TCC-TTTTTGCAC-AC-GGCCCTCATTACCAATTTTTAAGTACCATAACTGATATGTACGCTC--GAAGCGCATACGTCATTGA---TT---GTTG-CCTTC--TGCTCAATCA-AACTtgaaatgcctacgtcattgaatgttgtgttctgctcagtcagactatcgccacagtatttgaagctccgtgttgaaagagaagatcattagaggttctttagggggatatcggagatgggaaatataaaatattaattatgtggagtagaactacaattttatggatgaaaaatacagcgcacggaattaaaaaaaacacctttacttgtgttgatgcaatgcaatatacttttaagagatagtctcgaaaggacatgtctatcaccataggcatagccgccggagcgttagagttaatgatgtggccctatattccgaatttttgacattatttaaccacacttcctatggcaaaagagatatcccctcaaacattcgaaatgactaagctgtcagt
gi|9 : aaatgtttttttagatatataaaggaaaatac-----------TA-----T-------GAAA------ACAAAATATA-----AATACGTTATGGAAAC---------AAAAAAATATATAC-GTTATGCAC-AC-GACCCTT--------TTTTGA---AC-ACGGCC----------CTCATGAAATGCCTACGTCATTGA---AT---GTTG-TGTTC--TGCTCAGTCA-GACTATCGCC-A--CAGTATTTGAAGC-TCCGTG-TTGAA----AG---------------AGAA------GATC----AT-----T---AGAGGTTCTTTAGGG----GGATATCGGAGATGGGAAATATAAA-A-TATTAAT-TAT----GT-GGAGTAGAACTACAATTT------------------TATGGATGAAAAATACAGCGCACGGAATT--AAAAAAAACACCTTTACTTGTGTTGATGCAATGCAATA----TA--CTT-TTAAGAGATA-GTCTCGAAA---GGACATGTCTATCACCATAGGCAT-AGCCGCCGGAGCGT-TAGAGTTAA-TGATGTGGCCCTATATTCCGAATTTTTGACATTATTT--AACCACACTTCCTATGGCAAAA--GAGATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGT
gi|19 : tCACGACCAATTTTG------CACA-CTG-------CCCTCATGAAATACCTACGTCATTGA---AT---GTTG-CGTTA--TTCTCAGTCA-GAATATCGC------CGTCTTTGAAGC-TCCTTG-TTGAA----AG---------------AGAA------GATT----CT-----A---AGAAGTTCCTTAGGG----GGAGATCGGAGATGGTAAAT-TAAA-ATTATTATT-TAT----GT-GGAGTAGAACTACAATTTGGTTGTTTAATTGTGTTTTATGGATGAATAA
gi|14 : aGTACCACAGCTGAGTTGTACGCTC--GAAACGCCTACGTCATTGA---TT---GTTG-CGTTC--TGCTCAGTCA-GACTTTCGCA-A--CAGTCTTTGAAGC-TTCGTG-TTGAA----AG---------------AGGA------GATT----AT-----A---AAAGGTTCTTTAGGG-----GAGATCGGAGATGGGAAATATAAA-A-TATTAAT-AAT----GT-GAAGTAAAACTACAATTTAGTTATTCAATTGTGTTTTATGGACGAATAATAAGGCGCACGCAA--TTAAAAAAAA-A-CTTTGCTTGTGTTGATACAATGCAATATATTT---TTT-TTAAGAAACAGGGATCGAAAAGAAGACATATTTATCACCATAGGAATATGA-GTCGGGGTGG-TAGG---CGATGATGTGGCTCAATATTCCGCATTTTTAACATTTTT---AACCAGACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTTGAAATGACTAAGCTATAAGTTGATGgacggagcgttaggat
gi|11 : AAAAGTCTACGTCATAGA---TTTTTGTCG-TGTTCGCTTCCA------GAC-A-CGTG-AACCCCTTTTCGGTGC-TT-----TTGAATGACAA---------------AAAA------TATT----GT-----A---AGAGGGTCATTAGGG----GAAG--------TGGGAAATGTAAA-C-TATTAAG-TAT----ATTAGAGTAGAAATATAATTTAGTTATTAAATT-T-TTTTATGGATGAATAATc
gi|1 : attatatacgttatggaaacaatatatatatacgttatgcaaacaaatatacatacgttatgcaaagaaaatatatatacgttattcacaagaccccaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaACGC-TACGTCGTTGA---TT---GTTG-CGTTC--TGCTCAGTCA-GACTATCGCA-A--CCTTCTTTTAAAC-TCCTTG-TTGAA----AA---------------AGAA------GATT----CT-----A---AGCGGTTCTTTAGGG----GTAGATCGGAGATCGGAAATATAAA-A-TATTGAT-TAT----GT-GGAGTAGAACTGCAATTTAGTTATTTAATTGTGTTTTATGGATTAATAATTAAACGCACGGAATTTT--AAAAAA-GCCTTTACTTGTGTTGATGCAATGCAATA----TATCTTT-TCATGAAATA-GTCTCGA---TAAGACATATTTATCACCATAGGCATATGA-TTCGGAG-AGTTAAGGTT-GGTGATGTGGCACAAAATTCTGATTTTTTTACACT-TTTTAAACCACACATCTAAGGGCAAAATTGAGATATCCCCTCAAACATTCGAAATGACTAAGTTGTC---TAATGATCCACAATG---ACGGAT-TGCACC------AGTAAATGGGTCTCGAAATGC-AGT-TACTACTAT--AAATCTCTATATCAGATTATGCTAAAT-GACGGATTGCACCATAAAGCAAAAGcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|7 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatGCCTACATCATTGA---TT----TTGTCGTGT--TATCA--TCCAGACGAGTGTA-C--CCCATTTCGAAGC-TTT-TGATTGA----------------------TGAA------GAT------------------AATTGTTAGAGGGTCGTAAAGG--GAAGGTGGGAAATGTAAA-T-TATTAAG-TAT----ATTAGAATAGAAACATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|5 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagaGCCCACGTCATCGA---TTTTTGTCG-TGTTC--T--CA--TCCAGACGCTTGAACA--CCAT-TTCGAAGC-TTT-TGATTGAC----------------------GAA------GATT----ATTGTTCG---AGAGTCTT---AAGG----GGAGG---GA----GGAAATGTTAA-C-C-TTAAG-TGT----ATTAGAGTAGAAATATAATATAGTTATTAAGTTGg
gi|17 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataattttatatacgttatgcaaacaaaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagaGCATACATCAT-GAATTTT---GGCG-CGTTC--T--CA--TCCAGACGCGTGTA-T--CCCTTTTCGAAGC-TTTTGG-TTGAC----GA---------------AGAT------TATT----GT-----T---AGAGGGTATTAAAGG----GAAGGTGGGAAATGTTAACTATTAA-A-TAT--AT-TAC---------AGTAGAAATATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAAA
gi|12 : cccaaatggaaccagtttcgcaacaattccgagaaccagacggtgtaacagtaaacattgcccgattactgggaaacccaaaatgcaatcgcttatctgaagccaggatacaatatcttcgcagaaagaCCTACGTCATTGC---TT---TTTG----TCG-TGT----TCT----CATC-CA-G--ACG-CTTTGAAGCATTTGT--TTGA----------------------TGAA------GATTATTGTT-----AG--AGGGTCTTAATGGGA----AG-GGT--GATATGTAAGCTATAAGTG-TATTA--------------GAGTAGAAATATAATATAGTTATTTAATTGTg
gi|4 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcgacaaataaatatggtaaactcacattggcacatcggtaataaattatatatacgttatgcaaacaaaatatatatacgttatgcacacgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaaGAA------GATT----AT-----TGTTAGAGGATTTTCAGAG----GAAGGT-------GGGAAATGTAAA-C-TATAAGT-AAA----TT-AAAATAGAAATATAATTTAATTA-TCAAAT-TGTTTTATGGACGAATAATAAAGCGCACAGAA
gi|20 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcgacaaataaatatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaacaaaatatatgtacgttatgcagaccggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacGAA------GATT----AT-----TGTTAGAGGGTCTTTAGGG-----GAG-------ATGGAAAATATAAA-C-TATTAAC-TATATAAGT-GAAGGAAA---ACAATTTAGTTATTAAATTGTacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|24 : ttgagaaaatctagaagcaatccgtgatcagaccaaaggctgcaatacctgaaaagaacaccgcagaaagagatacgtcatagttttttgccgtgtttaatccagacacttgatctacA----T---TTTGTTAAGAAATA-GTCTCGAAAAGAAGACATATTTGTCACCATCGGCATAAGA-GTCGGAGCGA-AAGAGTT-GGTGATGTAGCCTAATATTCCt
gi|22 : aCGGAGCGT-TAGGATTGG-TGATGTAGCCCAATACTCCGAATTTTTAACATTTT----AACCACGCTTCTTGGAGCGAAGTTGACATATCCCCTTGAACATCCGAGATGACTAAGCTATCAGTTGATt
gi|1 : gaAATG---ACGGAT-TGCACCATAAAGCA-AAA-G---C---AAATACTACTGTA----TATTAGTATTTCAATATCAGATTATGTCCAATCGACGA-TTGCACC----AGTGAATGGGTCT--AAATATGCAAATACTAAGT
6 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|8 ): AATGACATAATTACAGAGATCCACAGATCTAAGATACCGATCTTCTATACTAATTTAATATATATGGCTGAAATTTCGAGTGGTATCTTTTATAACTTTTTGAACCACTGTCTGAAAATAATAATTTTGGTAACATTGGAATATTAAGCTGACATTTGAATTAATTGACATCTTTTAAAATTGTTACCAGTCATGATTTATTTTCGTTCTGAGTTAAAAAATATTACAGATTGGAAAAAATGTATGCATTTTTAAAAAGAAGTATTTTTTGAAACAAAAAAGGTACCATACTAGTTTCAACAAAGTCTTTTACCTTTTTAACTATCATATCATTTAAATATAAATTTTGTACAGAAAGATAAAGAAGTGAATAATCCATTGGTAGTGAACATTTTTGATTTTTTTTTTTTAAAAATTATGTTGCTTAAAATTTAAAAGAAAACATTATCATGAACAATTTTATGCAGTATTTTTATGCTTTTGTTGTGAAGT
Unaligned ( gi|10 ): TCCATACATAACTATAGTGACTTAATTACAGATGATGGCAGGCTAATAGCAATATAATGCACACGGCTGAAATTTCAGGTGGCATCTTTAGTATTTCTTTGAATCTTTGTCTGAATGAAATAATTTTGGTACGAAAGTTAAGCTGATAAAACTGATAACATTTCCAACTATCAATTATTTAATATTTTTCTTCTGAATTTAAATTATTACGGATTGAAAATGAAAATTGTTGAAATTTTTTACGAAATATTTTTTTTATTTTAACAAAAAATGGTAGTGTACTTGATTTAACAAATACATTTATCAACAAACAATAGAAATAAAAAAAAATATGTAGAAAGATGACAAAGTAAGTTTCCATTGGTGGCGAAAATTTCATATTTCATATAACATTTCCATAGATAATTTACATTTCCGTGGATAACTTACCTTTCCATGGACAATTTCATCAATACTGAGCTCTGTGTATTCATCCTGAAGTA
Unaligned ( gi|16 ): ATATATATGCATATAAAAGTAAAATATAGAATATCTAACGTGATATGTAAGATAAATATATTTATATATATGTGTGTTTTGTGTATATATAACAAAACACGTTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGAAAAAACACAAAATATTGATATGTATGTCGTCCGTTACAAAAAAAATATAGGAAAAACCCAGATGCAATCTGTGATCGGACCCAAGGCTGCAATACCCACAAAGAACATGCTACGTTGTTGACTTTTGTCGTGTTTCCAGACGCTTGCGCCCATTTTCGTAGCATTTGATT
Unaligned ( gi|23 ): TGAGGCGATGAACGTCACTATATTCGGAGTATATACTGTGTTCGTGATTATATATATACTTTTTAGTAAAAAAAATACACCCTCGACAAATAGATATAGTATA
Unaligned ( gi|26 ): ATTTACTGATTTAATTCTTAAATATATGGACGAGTGTATT
Unaligned ( gi|27 ): ACAGTATACTCTTACCAATACTGTTAACGAA
Alignments
lowQualScore : 11111111 2222222222222222222 3333333333333333333 44444444 111 5555555555555555555555555555555555555555555555555555555555 33333333333333 111111111 22222222222222222222 1111 4444444444 11 111 22222222222222 2222222222222222222222 111 111111 111 22222222 1 1 11 3333 222 555555555 1 111 222222 2 4444 222222222222222
lowQualScore : 3 666 3 7777 11111111 33 33 2 1111111111111111111 2 666666 33 4 666 333 55555 7777777777777777777 2 22 666666 77777777 55555 55555 333 4444 2 22 2 5555555555555555555555555555555555555555555555555555555555 555 33 88888888888888 222222222 00 2 5 5 33333333333333333333 5555 5555555555 0 88 2 444 444 777 444 7 777 3 00000000000000 2 2 2 2 1 2 7777777777777777777777 44 1 9999 3 3 222 2 33 5 99 33 33 1 2 55 0 222222 5 0 000 44444444 5 7 1 3 0 6 4 1 1 0 44 2 4 7777 2 3 3 111 3 000000000 0 999 888888 0 1 3 6 4444 0 999999999999999
lowQualScore : . ... . .... ........ .. .. . ................... . ...... .. . ... ... ..... ................... . .. ...... ........ ..... ..... ... .... . .. . .......................................................... ... .. .............. ......... .. . . . .................... .... .......... . .. . ... ... ... ... . ... . .............. . . . . . . ...................... .. . .... . . ... . .. . .. .. .. . . .. . ...... . . ... ........ . . . . . . . . . . .. . . .... . . . ... . ......... . ... ...... . . . . .... . ...............
lowQualScore : 6 444 6 1111 66666666 44 44 4 8888888888888888888 4 444444 11 4 111 999 66666 4444444444444444444 2 99 111111 99999999 66666 66666 666 7777 1 99 5 1111111111111111111111111111111111111111111111111111111111 000 99 44444444444444 333333333 44 5 0 0 55555555555555555555 5555 1111111111 7 88 9 444 444 888 444 5 000 5 66666666666666 7 0 7 2 3 9 6666666666666666666666 22 0 5555 9 7 111 1 44 3 22 99 99 0 0 11 2 999999 7 1 000 11111111 7 1 0 0 1 6 0 0 7 3 22 2 8 5555 5 2 2 222 2 000000000 0 888 888888 7 0 3 7 7777 7 333333333333333
consensus : NNGTGAC-A---AATAAAT-ATG----GTAAACTGACTA-A--T--AT-ATATA-----C---GTTANA-TCGG-T------A--A-A---A---TAT-----A-----TA-----T------ATAC-GTTAT--GCAA------ACC-----A-AAAT-----AT-----AT-TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A--T-A----------T----TATGCAAACAAAA---TA--TA---T-TATA---A-CGTTATGCACAC---------GACCCTTTTTGCAC-A-CGG--CC---CTCGCTACC-A--TTTTGA-GTACCACAGCTGA--T-TGTACGCTCA-GAAAC-GCCTACGTCATTGA---T---T---GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCTTGTT-GAC---------------------GGAGANGATTGTN---AGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAA-TATTAAT-TATG-T-GGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGAT-CACAATGACGGATTGCACCAG-AAATG-GT--C---AA-ATGCA-GGTACTACTATA------TATTTCTATATCAGATTATGTCCAAT-GACGGATTGCACC----AGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
Reference ( family-1821 ) : NNGTGAC-A---AATAAAT-ATG----GTAAANTGACTA-A--T--AT-ATATA-----C---GNCANA-CCGG-T------A--A-A---A---TAT-----A-----T------T------ATAC-GTTAT--GCAA------ACC-G-T-A-AAAT-----AT-----AT-TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A--T-A----------T----TATGCAAACAAAA---TA--TA---T-TATA---A-CGTTATGCACAC---------GACCCTTTTTGCAC-A-CGG--CC---CTCACTACC-A--TTTTGA-GTACCACAGCTGA--T--GTACGCTC--GAAAC-GCCTACGTCATTGA---T---T---GTT---G-CGTTCTGCTCAGTCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCTTGTT-GAA---------------------AGAGAAGATTNTA---AGAGGTTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAA-TATTAAT-TATG-T-GGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGGTAGGGTTGGGTGATGTGGCCCAATATTCCGAATTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAGATATCCCCTCGAACATTCGAAATGACTAAGCTGTCAGTTGATGNTCCACAATGACGGATTGCACCCG-AAATG-----C---AA-ATGCA-TGTACTACTATA------TATTTCTATATCAGATTATGCCNAATCGACGGATTGCACCATAAAGCGAANGGGTCT--AAATATGCAAATACTAAGT
gi|1 : GAC-A---AATACAT-ATA----GTAAACTG-TTA-AAAT--AT-ATATA-----C---GTTATA-C-----------A--ATA---A---TAT-----A-----TG-----T------ATAC-GTTAT--GGAC------ACCAG-C-A-AATT-----AT-----A--TA----TACGT-TAT--GCAAA-CAATACA---A--A---------------CAT-----A--T-A----------
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcAC-GC-TACGTCGTTGA---T---T---GTT---G-CGTTCTGCTCAGTCAGAC---TATCGCA-A--CCTTCTTTTAAAC-TCCTTGTT-GAA---------------------AAAGAAGATTCTA---AGCGGTTCTTTAGGGGTAGATCGGAGATCGGAAATATAAAA-TATTGAT-TATG-T-GGAGT--AGAACTGCAATTTAGTTATTTAATTGTGTTTTATGGATTAATAATTAAACGCACGGAATTTT--AAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----TATCTTT-TCATGAAATA-GTCTCG---ATAAGACATATTTATCACCATAGGCATATGATTCGGAGAGTTAAGGTT-GGTGATGTGGCACAAAATTCTGATTTTTTTACACTTTTTA-AACCACACATCTAAGGGCAAAATTGAGATATCCCCTCAAACATTCGAAATGACTAAGTTGTC---TAATGATCCACAATGACGGATTGCACCAGTAAATGGGT--CTCGAA-ATGCA-GTTACTACTATA------AATCTCTATATCAGATTATGCTAAAT-GACGGATTGCACCATAAAGCAAAA--------------GCAAATACTAcgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatTATCAGATTATGCT--A-AATGACGGATTGCACCAT-AAA-G-----C---AA-AAGCA-AATACTACTGTATATTAGTATTTCAATATCAGATTATGTCCAATCGAC-GATTGCACC----AGTGAATGGGTCT--AAATATGCAAATACTAAGTctgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|11 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctcta------T------ATAC-GTTAT--GGAA------AC---------AAT-----AT-----ATATA----TACGT-TAT--GCAAAC------A---A--A---------------TAT-----A--C-A----------TACGTTATGCAAAGAAAA---TA--TA-----TAT----A-CGTTATTCACAA---------GACCCactgtatttt
gi|11 : attaAAAA-GTCTACGTCATAGA---T---TTTTGTC---G-TGTTC-GCTT--CCAGAC----A-CGTG-AACCCCTTTTCGGTGC-TTTTGAAT-GAC---------------------AAAAAATATTGTA---AGAGGGTCATTAGGGGAAG--------TGGGAAATGTAAAC-TATTAAG-TATA-TTAGAGT--AGAAATATAATTTAGTTATTAAATT-T-TTTTATGGATGAATAATcaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaaaaagtctacgtcatagatttttgtcgtgttcgcttccagacacgtgaaccccttttcggtgcttttgaatgacaaaaaatattgtaagagggtcattaggggaagtgggaaatgtaaactattaagtatattagagtagaaatataatttagttattaaatttttttatggatgaataatcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : attatatacgttatggaaacaatatatatatacgttatgcaaacaaatatacatacgttatgcaaagaaaatatatatacgttattcacaagaccccaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaA-A--T--AT-ATATA-----C---GTTTAA----G-T------A--A-A---A---TAT-----A-----T---------------AC-ATCCTCGACAA------AT--------AAAT-----AT-----GG-TAAACTCACAT-TG---GCACATCGGTA-ATAAATTA---------------TAT-----A--T-ACG--------T----TATGCAAACAAAA---TA--TA-----TAT----A-CGTTATGCACAC---------GACCCcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaGAC-A---AATAAAT-ATG----GTAAACTCAC---A--T---------------T---GGCACA-TCGG-T------AATA-A---A---T-T-----A-----TA-----T------ATAC-GTTAT--GCAA------AC------A-AAAT-----AT-----A--TA----TACGT-TAT--GCACACcaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcCCTACGTCATTGC---T---T---TTT---GTCGTGTT-CTCATCCAGAC----------------G-CTTTGAAGCAT--TTGTTTGAT---------------------GAAGATTATTGTT---AGAGGGTCTTAATGGGAAGG---GTGAT-----ATGTAAGC-TATAAGTGTAT--T-AGAGT--AGAAATATAATATAGTTATTTAATTGTgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|13 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcgacaaataaatatggtaaactcacattggcacatcggtaataaattatatatacgttatgcaaacaaaatatatatacgttatgcacacgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaaTGACTA---CATATAT-ATGTTTGGTAAA------A-A--T--AT-ATATA-----C---GTTATG-CAAA-C------A--A-A---A---TAT-----A-----TA-----T------ATAC-GTTAT--GCAA------ACC-T-G-C-AAAT-----AA-----ATATA----TACGT-TAT--GCACACCGGTA-A---A--AATATACATACCGGGGTAT-----A--T-AAG--------T----TATGCAAACAATA---TA--TA---T--------A-CGTCATGCAAAC---------AA
gi|13 : aG----GTAAA------A-A--T--AT-ACATA-----CCGGGGTATA-TAAG-TTATGCAA--ACA---A---TAT-----A-----T-------------ATAC-GTCAT--GCAA------AC------A-AAAT-----AT-----A--TA----TACGT-TAT--CTACACaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|13 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccCCAACGTCATTGA---TTTGT---GTC---G-TGTT---CTCATCCAGAC---GCGTGTA-T--CCCTTTTCAAGGC-TTTTGATT-TAC---------------------GAAGATTATTGTT---AAAGGGTCTTAAGGGGTAGGTGGGAAAT---AAATAC-----TATTAAG-TATgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|14 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggtatataagttatgcaaacaatatatatacgtcatgcaaacaaaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaa-GTACCACAGCTGAGTT--GTACGCTC--GAAAC-GCCTACGTCATTGA---T---T---GTT---G-CGTTCTGCTCAGTCAGAC---TTTCGCA-A--CAGTCTTTGAAGC-TTCGTGTT-GAA---------------------AGAGGAGATTATA---AAAGGTTCTTTA-GGGGAGATCGGAGATGGGAAATATAAAA-TATTAAT-AATG-T-GAAGT--AAAACTACAATTTAGTTATTCAATTGTGTTTTATGGACGAATAATAAGGCGCACGCAA--TTAAAAAAAA-A-CTTTGCTTGTGTTGATAC---AATGCAATATATTT---TTT-TTAAGAAACAGGGATCGAAAAGAAGACATATTTATCACCATAGGAATATGAGTCGGGGTGGTAGG---CGATGATGTGGCTCAATATTCCGCATTTTTAACA--TTTTT-AACCAGACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTTGAAATGACTAAGCTATAAGTTGATG
gi|15 : --GCAA------AC---------AAT-----AT-----AT-AA----TATGT-TAT--GAAAAC----A-A---A--A---------------TAT-----A--T-A----------TACGTTATGAAAACAAAA---TA--TA---A--ATA-----CGGTATGCACAT---------GTCTCTTTTT-CAA-A-CGA--CC---CTGACTACC-A--------------AAAGCT--------------------AC-GCCTACGTCATTGA---T---T---GTT-------------TTAGTCAGAC---TTTCGCA-A--CCGTCCTTGAAGC-TCCTTGTT-GAA---------------------AGAGAAGAATCTA---AGAGGTTCTTTACGGGT-GATCGTAGATGTGAAATATAACA-TATTAAT-TATG-T-GGTGT--AGAACTACAATTTACTTATTTAATTGTGTTTTATGGATGAATAATAAAGCGCACGGA--TTTAAAAAAAA-GCCTTTATTTTTGTTGATGC---AATGCAATA----T---c
gi|17 : -GCATACATCAT-GAATTT---T---GGC---G-CGTTCT---CATCCAGAC---GCGTGTA-T--CCCTTTTCGAAGC-TTTTGGTT-GAC---------------------GAAGATTATTGTT---AGAGGGTATTAAAGGGAAGGTGGGAAATGTTAACTATTAAA-TAT--AT-TAC------AGT--AGAAATATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAAAG
gi|18 : cccaaatggaaccagtttcgcaacaattccgagaaccagacggtgtaacagtaaacattgcccgattactgggaaacccaaaatgcaatcgcttatctgaagccaggatacaatatcttcgcagaaagaTGAC-A---AATAAAT-ATG----GTAAATTGACTA-A--TAAAT-ATATAT----T---AGCACA-TCAGTT------A--G-A---A---TAT-----A------------T------ATAC-GTTAT--GC-A------ACC-----A-AACT-----AT-----AT-TG-----ACGT-TAT--GCAAAC----------A--A---------------TAT-----A--T-----------------------------A---TA--TA---T-TAT----A-CATTAGACACTC---------GACACATTTTGCAC-A-CGG--TC---ATTGCTACCTA--TTTTGATGTACTACAG
gi|19 : gttatatttacatcgtaatgcaatcgtatgaagccccaaacgtgattatattcagtgacataaatgaattatatgtgtaaaagtatacactctCACGACC-AA-TTTTG------CACA-CTG---------CCCTCATGAAAT-ACCTACGTCATTGA---A---T---GTT---G-CGTTATTCTCAGTCAGAA---TATCGC------CGTCTTTGAAGC-TCCTTGTT-GAA---------------------AGAGAAGATTCTA---AGAAGTTCCTTAGGGGGAGATCGGAGATGGTAAAT-TAAAATTATTATT-TATG-T-GGAGT--AGAACTACAATTTGGTTGTTTAATTGTGTTTTATGGATGAATAA
gi|2 : aGTGAC-A---AATAAAT-GTG----GTAAACTGACTA-A--T--AT-ATATA-----T---GGCACA-CCGG-T------A--A-A---A---TAT-----A-----T------T------ATAC-GTTAT--GCAC------ACC-GGT-A-AAAT-----AT-----AT-TA----TACGT-TAT--GCACACCGGTA-A---A--A---------------TAT-----A--T-A----------T-----ATGCAAACAACA---TA--TA---T-TATA---AACGTTATGCACAC---------GATCCTTTTTGCACTA-AGG--CC---CTCACTATCGA--TTTTGATGTACCACAGCTGA--TTTGTACGCTC--GAAAC-GCCTACGTCATTGA---T---T---GTT---G-CATTCTGCCAAGTCTGAC---TATCGCA-A--CCGTCTTTGAAGC-TCCATGTT-GAA---------------------AGGGAAGATTCTA---AGAGTTTTTTTAGGGAGAGGTCGGACATGGGAAATATAAAA-TATTAAT-CATG-T-GGAGT--AGAACTACAATTTAGTCATTCAACTGTGTTTTATCGAGGAATAATAAAATGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATATGTTTCAAAACGAAGACATATTTATTACCATAGGCATCAGAGTCGGAGCAGTAGGGTTGGGTAATGTGGCCCAATATTCCAATTTTTTTACATTCTTTTAAACCACACTTCTTAGTGCAAAATTGAAATATCTCCTCAAACATTGGAAATGACTAAGCTGTCAGTTGATGA---ACAATGGCGAATTGCACCCG-AAATG-----C---AG-ATACATTGTACTTCTATA------TATTTCTATATCATAATATGTCCAAT-GGCGGTTTGCACC----AGCAAAAGGGTCTCGAAATA--AAAACACTAAGTgacggagcgttaggat
gi|20 : ccGAAGATTATTGTTAGAGGGTCTTTAGGGG--------AGATGGAAAATATAAAC-TATTAAC-TATA-T--AAGTGAAGGAAAACAATTTAGTTATTAAATTGTtc
gi|21 : ttgagaaaatctagaagcaatccgtgatcagaccaaaggctgcaatacctgaaaagaacaccgcagaaagagatacgtcatagttttttgccgtgtttaatccagacacttgatctac------A--A-A---A---TAT-----------T------T------ATAT-GTCGT-------------TC-G-TTACAAAT-----AT-----AT--A----TACGT-TAT--GCACACt
gi|21 : aaatgtttttttagatatataaaggaaaatacAAA---TA--TA---T--ATA-----CGTTATGCACAC---------GATCCTTTTTGCAC-A-CGG--CC---CTCATTACC-AATTTTTAA-GTACCATAACTGA--TATGTACGCTC--GAAGC-GCATACGTCATTGA---T---T---GTT---G-CCTTCTGCTCAATCAAAC---Tgatcctttttgcacacggccctcattaccaatttttaagtaccataactgatatgtacgctcgaagcgcatacgtcattgattgttgccttctgctcaatcaaact
gi|22 : aaatgtttttttagatatataaaggaaaatacaaaatatttatatgtcgttcgttacCGGAGCGTTAGGATTGG-TGATGTAGCCCAATACTCCGAATTTTTAACATTTT----AACCACGCTTCTTGGAGCGAAGTTGACATATCCCCTTGAACATCCGAGATGACTAAGCTATCAGTTGAT
gi|24 : gaA----T---TTTGTTAAGAAATA-GTCTCGAAAAGAAGACATATTTGTCACCATCGGCATAAGAGTCGGAGCGAAAGAGTT-GGTGATGTAGCCTAATATTCC
gi|25 : aA-A--T--AC-ATATA-----C---GTTATG-TAAA-C------A--A-A---A---TAT-----A------------T------ATAC-GTTAT--GTAA------ACt
gi|3 : aacaaGAC-A---ACAAAAT-ATG----GTAAACTGACTA----T--AT-ATATA---------GGCAAA-TCGG-T------A--A-ATATA---TAT-----A-----TA-----T------ATAT-GTTAT--GCAA------AC------A-AAAT-----AT-----AT-------------------------------------A---------------TAT-----A--C-A----------T----TATGCAAACAAAA---TA--TG---T--ATA-----CGTTATGCACAC---------GACCCTTTTTGCAC-A-CGG--C--------------A--TTTTGATGTACCACAGCTGA--TTTGTACGCTC--GAAAC-GCCTACGTCATTGA---T---T---TTG---G-CGTTCAACTCAGTCAGAC---TATCGCA-G--CCGTCTTTGAAGC-TCCTTGTT-GAAAGTAAAGAATTTTAGAAGAAAAGAGATGATTCTA---AGAGGTTCTTTAGTGGGAGATCGGAGATGGGAAATATAAAA-TGTTAACGTATG-T-GGAGA--AGAACTACAATTTGATTATTCAATTATGTTA-ATAGATACATAATAAA------------------AAAA-GCCTT--CTTCTGTTGATGC---AAAGCAATAAT--T---TTT-TTAAG-AATACGTCTCGAAAAGAAAACATGCTGATCACCAAAGGCATGGGGGTCGGAGCGGTAGGGTTGGGTGAGTTGGTCCAATATTCCGATTTGTTTACATTCTTTT-AACCACACTTCATAGGGCAAAATTGAAATATCCCCTGTAACATTCGAAATGGCTAACATGTCAGTTGATG---CACAATGACAG-T---------AAATGTGTCTC---AATATACA-GGTACTACTATA------TATTTCTATATCAGATTATGaa
gi|4 : ctatgagaggtcaaacgtgactatattcagtgacataaatatatatgtttaagtaaaaaatatacattttcGTGAC-ATAAAAAAAGT-GTT----GTAAAC-------------AT-ATATA-----C---GTTTAA----G-T------A--A-A---A---TAT-----A-----T-------------ACAC-CCTCG--ACAA------AT--------AAAT-----ATGGNNNNN-NN----NNNNN-NNN--NNNNNNNNNNN-N---N--N---------------NNN-----N--N-N----------N----NNNNCAAACAAAA---TA--TA-----TGT----A-CGTTATGCAGAC---------
gi|4 : tatgaggtgccaaacgtgacaatattcaGAC-A---AATAAAT-ATG----GNNNNNNNNNNN-N--N--NN-NNNNN-----N---NNNNNN-NNNN-N------N--N-N---N---NNN-----N--------------------------------CAA------AC------A-AAAT-----AT-----AT--G----TACGT-TAT--GCAGACCGGTA-cggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|4 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctc-GCATACGTCTTTGA---T---T---TTT---GTCGTGTT-CTCATCCAGAC----AT-------------TTTGA----------TT-GAC---------------------GAAGATTATTGTT---AGAGGATTTTCAGAGGAAGGT-------GGGAAATGTAAAC-TATAAGT-AAAT-T-AAAAT--AGAAATATAATTTAATTATCAAAT--TGTTTTATGGACGAATAATAAAGCGCACAGAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcgacaaataaatatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaacaaaatatatgtacgttatgcagaccggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaaga-A--T--AC-ATATA-----C---GTTTAA----G-T------A--A-A---A---TAT-----A-----TACTACCTCGAAAAATAC-ATTAT--GGTA------AAC-G-G-A-CTAT-----AT-----AT-TA----TAT-----T--GCACATTGGTA-A---A--AATTCATAAACACT--TAT-----A--TTG----------T----TATGCAAACAATA---TA--TAATTT-TATAT--A-CGTTATGCAAAC---------AAacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttGAA-A---AATACATTATG----GTAAACGGACTATA--T--AT--TATA-----T---TGCACA-TTGG-T------A--A-A---AATTCAT-----AAACACT------T------ATATTGTTAT--GCAA------AC---------AAT-----AT-----AT-AA----T---T-T-------------TA------------------------TAT-----A--C-G----------T----TATGCAAACAAAA---TATTTA---T-TATATATA-CGTTATGCATAaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcT-ATATA-----C---GTTATG-CAAA-C------A--A-A---A---TATTTATTA-----TA-----T------ATAC-GTTAT--GCAT------ATC-GGT-T-AAAT-----AT-----AG-TA----TACGT-TAT--GCAAAC----A-A---A--A---------------TATTATATA--C-A----------T----TATACAAACAAAA---TA--TA---TATACA---A----TATGCACAC---------GACCCC-----CAG-AGCGGTACCAGTTTCGCAACA-A--TTCTGA-GAACCAtcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataattt-GCCCACGTCATCGA---T---T---TTT---GTCGTGTT-CTCATCCAGAC---GCTTGAACA--CCAT-TTCGAAGC-TTTTGATT-GAC---------------------GAAGATTATTGTT---CGAGAGTC-TTAAGGGGAG---GGA----GGAAATGT-TAA-CCTTAAG-TGTATT-AGAGT--AGAAATATAATATAGTTATTAAGTTGgacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|6 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataattttatatacgttatgcaaacaaaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagaC-A---AATAAAT-ATG----GTTAAATGACT--A--T--AT-TTATA-----T---ATTATGTTCGG-T------A--A-AT--A---TAT-----A-----TA-----T------ATA
gi|6 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgCTCA-GAAAGAGCCTACGTTATTGA---T---T---TTTGGCG-CGTT---CTCATCCAGACGCGTAT---A-T--CCCTTTTCGAAAC-Tattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttctcagaaagagcctacgttattgatttttggcgcgttctcatccagacgcgtatatcccttttcgaaacttttgacatatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgcaaataaatatggttaaatgactatatttatatattatgttcggtaaatatatatatataattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttA-A--T--AT-ATATA-----C---GTTTAA----G-T------A--A-A---A---AAT-----A------------T------ACAC-CTTCA--ACAAATAAATATG-G-T-A-AAATGACTAAT-----AT-AA----TATATATATTGGCACATCGGTA-A---A--A---------------TAT-----A--T-AAATATATACGT----TATGCAAAAAAAA---TA--TA-----TAT----A-TGTTATGCAAACCTAATATATAATACTTTATGCAC-A-TGA--CC---Ctttgacatatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaAC-A---AATAAAT-ATG----GTAAAATGACTA-A--T--ATAATATATATATT---GGCACA-TCGG-T------A--A-A---A---TAT-----A-----TAAATA-T------ATAC-GTTAT--GCAA------AA------A-AAAT-----AT-----A--TA----TATGT-TAT--GCAAACC--TA-A---T--A---------------TATA----A--T-ACT--------T----TATGCAcaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaAAA-GCAATCACTTGT-CTGAGGCCAGGATGCAATA----C---TTT-CGCAGAAAGA-GCCTcatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccct-GCCTACATCATTGA---T---TTT-GTC---G-TGTTAT---CATCCAGAC---GAGTGTA-C--CCCATTTCGAAGC-TTTTGATT-GAT---------------------GAAGATAATTGTT---AGAGGGTCGTAAAGGGAAGG-------TGGGAAATGTAAAT-TATTAAG-TATATT-AGAAT--AGAAACATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|9 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagaT-TAT--GAAAAC----A-A---A--A---------------TAT-----AAAT-ACG--------T----TATGGAAACAAAAAAATA--TA---T--------A-CGTTATGCACAC---------GACCCTT---------------------------------TTTTGA-A---CACGGCC------------CTCATGAAAT-GCCTACGTCATTGA---A---T---GTT---G-TGTTCTGCTCAGTCAGAC---TATCGCC-A--CAGTATTTGAAGC-TCCGTGTT-GAA---------------------AGAGAAGATCATT---AGAGGTTCTTTAGGGGGATATCGGAGATGGGAAATATAAAA-TATTAAT-TATG-T-GGAGT--AGAACTACAATTT------------------TATGGATGAAAAATACAGCGCACGGAATT--AAAAAAAACACCTTTACTTGTGTTGATGC---AATGCAATA----TA--CTT-TTAAGAGATA-GTCTCGAAAGGA---CATGTCTATCACCATAGGCATAGCCGCCGGAGCGTTAGAGTTAA-TGATGTGGCCCTATATTCCGAATTTTTGACATTATTT--AACCACACTTCCTATGGCAAAA--GAGATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTg
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AATGACATAATTACAGAGATCCACAGATCTAAGATACCGATCTTCTATACTAATTTAATATATATGGCTGAAATTTCGAGTGGTATCTTTTATAACTTTTTGAACCACTGTCTGAAAATAATAATTTTGGTAACATTGGAATATTAAGCTGACATTTGAATTAATTGACATCTTTTAAAATTGTTACCAGTCATGATTTATTTTCGTTCTGAGTTAAAAAATATTACAGATTGGAAAAAATGTATGCATTTTTAAAAAGAAGTATTTTTTGAAACAAAAAAGGTACCATACTAGTTTCAACAAAGTCTTTTACCTTTTTAACTATCATATCATTTAAATATAAATTTTGTACAGAAAGATAAAGAAGTGAATAATCCATTGGTAGTGAACATTTTTGATTTTTTTTTTTTAAAAATTATGTTGCTTAAAATTTAAAAGAAAACATTATCATGAACAATTTTATGCAGTATTTTTATGCTTTTGTTGTGAAGT
Unaligned ( gi|10 ): TCCATACATAACTATAGTGACTTAATTACAGATGATGGCAGGCTAATAGCAATATAATGCACACGGCTGAAATTTCAGGTGGCATCTTTAGTATTTCTTTGAATCTTTGTCTGAATGAAATAATTTTGGTACGAAAGTTAAGCTGATAAAACTGATAACATTTCCAACTATCAATTATTTAATATTTTTCTTCTGAATTTAAATTATTACGGATTGAAAATGAAAATTGTTGAAATTTTTTACGAAATATTTTTTTTATTTTAACAAAAAATGGTAGTGTACTTGATTTAACAAATACATTTATCAACAAACAATAGAAATAAAAAAAAATATGTAGAAAGATGACAAAGTAAGTTTCCATTGGTGGCGAAAATTTCATATTTCATATAACATTTCCATAGATAATTTACATTTCCGTGGATAACTTACCTTTCCATGGACAATTTCATCAATACTGAGCTCTGTGTATTCATCCTGAAGTA
Unaligned ( gi|16 ): ATATATATGCATATAAAAGTAAAATATAGAATATCTAACGTGATATGTAAGATAAATATATTTATATATATGTGTGTTTTGTGTATATATAACAAAACACGTTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGAAAAAACACAAAATATTGATATGTATGTCGTCCGTTACAAAAAAAATATAGGAAAAACCCAGATGCAATCTGTGATCGGACCCAAGGCTGCAATACCCACAAAGAACATGCTACGTTGTTGACTTTTGTCGTGTTTCCAGACGCTTGCGCCCATTTTCGTAGCATTTGATT
Unaligned ( gi|23 ): TGAGGCGATGAACGTCACTATATTCGGAGTATATACTGTGTTCGTGATTATATATATACTTTTTAGTAAAAAAAATACACCCTCGACAAATAGATATAGTATA
Unaligned ( gi|26 ): ATTTACTGATTTAATTCTTAAATATATGGACGAGTGTATT
Unaligned ( gi|27 ): ACAGTATACTCTTACCAATACTGTTAACGAA
Alignments
lowQualScore : 11111111111111 22222222222222 111111111 111111111111 33333333333333333 222222222222222 44444444444444444444444444444444444444444444444444444444444 111111111111111 333333333333 111111111 1111111111 222222222222222222222 1111 3333333333 11 11 111 22222222222222 222222222222222222222222 111 11 111111 111 22222222 1 1 11 333 111 5555555555 1 111 222222 1 111 11 111
lowQualScore : 3 666 3 7777 33333333333333 88888888888888 22 222222222 111111111111 99999999999 2 88888888888888888 2 77777 222222222222222 4444 2 22 1 99999999999999999999999999999999999999999999999999999999999 666666666666666 444 555555555555 000000000 7777777777 1 4 4 66 999999999999999999999 5555 7777777777 22 77 66 888 444 33 444 7 777 1 00000000000000 2 2 2 3333 2 2 333333333333333333333333 33 0 1 1 7 222 2 0 2 5 22 1 33 1 2 55 0 222222 5 0 000 44444444 5 7 1 1 0 6 1 1 1 0 44 666 3 2 555 2222222222 0 000 888888 3 6 444 6 88 7 555
lowQualScore : . ... . .... .............. .............. .. ......... ............ ........... . ................. . ..... ............... .... . .. . ........................................................... ............... ... ............ ......... .......... . . . .. ..................... .... .......... .. .. .. ... ... .. ... . ... . .............. . . . .... . . ........................ .. . . . . ... . . . . .. . .. . . .. . ...... . . ... ........ . . . . . . . . . . .. ... . . ... .......... . ... ...... . . ... . .. . ...
lowQualScore : 6 444 6 1111 22222222222222 77777777777777 99 000000000 333333333333 55555555555 0 33333333333333333 1 44444 444444444444444 5555 0 88 7 22222222222222222222222222222222222222222222222222222222222 777777777777777 777 111111111111 777777777 3333333333 1 4 4 11 666666666666666666666 5555 9999999999 44 11 99 888 444 44 444 5 000 0 66666666666666 7 0 7 8888 5 5 777777777777777777777777 77 5 0 0 0 111 1 7 7 3 11 1 99 0 0 11 2 999999 7 1 000 11111111 7 1 0 0 1 6 0 0 7 3 22 000 2 5 555 5555555555 0 555 888888 3 7 000 7 33 3 333
consensus : NNGTGAC-A---AATAAAT-ATG----GTAAACTGACTAA--T---ATATATACGTT---ANA-TCG----GTAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------C---A---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATGCAAACA---------------AAA---TATA---T-TATA-A-CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CC---CTC---GC--TACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCTTG-TT-GACGA---------------------AGANNATTGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
Reference ( family-1821 ) : NNGTGAC-A---AATAAAT-ATG----GTAAACTGACTAA--T---ATATATACGTT---ANA-TCG----GTAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------C---A---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATGCAAACA---------------AAA---TATA---T-TATA-A-CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CC---CTC---GC--TACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCTTG-TT-GACGG---------------------AGANGATTGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGAT-CACAATGACGGATTGCACCAG-AAAT-G-GTC---AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
gi|1 : GAC-A---AATACAT-ATA----GTAAACTG-TTAAAAT---ATATATACGTT---ATA--CA----ATAA-----------TAT-----A------TGT-----------ATACGTTATG-GACAC--------C---AGC-AA-ATT----AT-----AT--------A----TACGT-TAT--GCAAA-CAATACA---A--A---------------CAT-----A---T-A----------
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcAC-G--C-TACGTCGTTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TATCGCA-A--CCTTCTTTTAAAC-TCCTTG-TT-GAAAA---------------------AGAAGATTCTAAGCGGTTCTTTAGGGGTAGATCGGAGATCGGAAATATAAAAT-ATTGAT-TATG-TGGAGT--AGAACTGCAATTTAGTTATTTAATTGTGTTTTATGGATTAATAATTAAACGCACGGAATTTT--AAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----TATCTTT-TCATGAAATA-GTCTCG---ATAAGACATATTTATCACCATAGGCATATGATTCGGAGAGTTAAGGTT-GGTGATGTGGCACAAAATTCTGATTTTTTTACACTTTTTA-AACCACACATCTAAGGGCAAAATTGAGATATCCCCTCAAACATTCGAAATGACTAAGTTGTC---TAATGATCCACAATGACGGATTGCACCAGTAAATGG-GTCTCGAA-ATGCA-GTTACTACTATAAATC------TCTATATCAGATTATGCTAAAT-GACGGATTGCACCA--TAAAG----C--AAA-A-GCAAATACTAcgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatAATGACGGATTGCACCAT-AAA----G-C---AA-AAGCA-AATACTACTGTATATTAGTATTTCAATATCAGATTATGTCCAATCGAC-GATTGCACCAGTGAATGGGTCT--AAATATGCAAATACTAAGTctgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|11 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgcta------TAT-----------ATACGTTATG-GAAAC-----------------A-AT-----AT-----ATA------TA----TACGT-TAT--GCAAAC------A---A--A---------------TAT-----A---C-A----------TACGTTATGCAAAGA---------------AAA---TATA-----TAT--A-CGTTATTCACAA---------GACCCactgtatttt
gi|11 : atA-AAAAA-G--TCTACGTCATAGATTTT---T--GTC---G-TGTTC-GCT--TCCAGAC----A-CGTG-AACCCCTTTTCGGTGC-TTTTGA-AT-GACAA---------------------AAAATATTGTAAGAGGGTCATTAGGGGAAG--------TGGGAAATGTAAACT-ATTAAG-TATATTAGAGT--AGAAATATAATTTAGTTATTAAATT-T-TTTTATGGATGAATAATcaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaaaaagtctacgtcatagatttttgtcgtgttcgcttccagacacgtgaaccccttttcggtgcttttgaatgacaaaaaatattgtaagagggtcattaggggaagtgggaaatgtaaactattaagtatattagagtagaaatataatttagttattaaatttttttatggatgaataatcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : attatatacgttatggaaacaatatatatatacgttatgcaaacaaatatacatacgttatgcaaagaaaatatatatacgttattcacaagaccccaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaAA--T---ATATATACGTT---TAA--------GTAA--A----A---TAT-----A------TAC-----------ATCCTCGA---CAAAT----------------AA-AT-----AT-----GG-------TAAACTCACAT-TG---GCACATCGGTA-ATAAATTA---------------TAT-----A---T-ACG--------T----TATGCAAACA---------------AAA---TATA-----TAT--A-CGTTATGCACAC---------GACCCcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaGAC-A---AATAAAT-ATG----GTAAACTCAC-------------AT-TGGC---ACA-TCG----GTAATAA----A---T-T-----A------TAT-----------ATACGTTATG-CAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--GCACACcaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcCA-GAAA--GAACCTACGTCATTGC---T---T--TTT---GTCGTGTT-CTCATCCAGAC----------------G-CTTTGAAGCAT--TTG-TTTGATGA---------------------AGATTATTGTTAGAGGGTCTTAATGGGAAGG---GTGAT-----ATGTAAGCT-ATAAGTGTAT--TAGAGT--AGAAATATAATATAGTTATTTAATTGTgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|13 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcgacaaataaatatggtaaactcacattggcacatcggtaataaattatatatacgttatgcaaacaaaatatatatacgttatgcacacgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgTGACTA---CATATAT-ATGTTTGGTAAA------AA--T---ATATATACGTT---ATG-CAA----ACAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------CTG-C---AA-AT-----AA-----ATA------TA----TACGT-TAT--GCACACCGGTA-A---A--AATATACATACCGGGGTAT-----A---T-AAG--------T----TATGCAAACA---------------ATA---TATA---T------A-CGTCATGCAAAC---------AA
gi|13 : aTATATAAGTT---AT---------GCAA--A----C---AAT-----A------TAT-----------ATACGTCATG-CAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--CTACACaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|13 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggGCGCA-GAAA--GAACCAACGTCATTGA---TTTGT--GTC---G-TGTT---CTCATCCAGAC---GCGTGTA-T--CCCTTTTCAAGGC-TTTTGA-TT-TACGA---------------------AGATTATTGTTAAAGGGTCTTAAGGGGTAGGTGGGAAAT---AAATAC----T-ATTAAG-TATgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|14 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggtatataagttatgcaaacaatatatatacgtcatgcaaacaaaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacct-GTACCACAGCTGAGT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TTTCGCA-A--CAGTCTTTGAAGC-TTCGTG-TT-GAAAG---------------------AGGAGATTATAAAAGGTTCTTTAGGGG-AGATCGGAGATGGGAAATATAAAAT-ATTAAT-AATG-TGAAGT--AAAACTACAATTTAGTTATTCAATTGTGTTTTATGGACGAATAATAAGGCGCACGCAA--TTAAAAAAAA-A-CTTTGCTTGTGTTGATAC---AATGCAATATATTT---TTT-TTAAGAAACAGGGATCGAAAAGAAGACATATTTATCACCATAGGAATATGAGTCGGGGTGGTAGG---CGATGATGTGGCTCAATATTCCGCATTTTTAACA--TTTTT-AACCAGACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTTGAAATGACTAAGCTATAAGTTGATG
gi|15 : G-CAAAC-----------------A-AT-----AT-----AT-------AA----TATGT-TAT--GAAAAC----A-A---A--A---------------TAT-----A---T-A----------TACGTTATGAAAACA---------------AAA---TATA---A--ATA---CGGTATGCACAT---------GTCTCTTTT--------T-CAA-A-CGA--CC---CTG---AC--TACC-A--------------AAAGCT--------------------AC-G--CCTACGTCATTGA---T---T--GTT-------------TTAGTCAGAC---TTTCGCA-A--CCGTCCTTGAAGC-TCCTTG-TT-GAAAG---------------------AGAAGAATCTAAGAGGTTCTTTACGGGT-GATCGTAGATGTGAAATATAACAT-ATTAAT-TATG-TGGTGT--AGAACTACAATTTACTTATTTAATTGTGTTTTATGGATGAATAATAAAGCGCACGGA--TTTAAAAAAAA-GCCTTTATTTTTGTTGATGC---AATGCAATA----T---c
gi|17 : CA-GAAAGAG--CATACATCAT-GAATTT---T--GGC---G-CGTTCT---CATCCAGAC---GCGTGTA-T--CCCTTTTCGAAGC-TTTTGG-TT-GACGA---------------------AGATTATTGTTAGAGGGTATTAAAGGGAAGGTGGGAAATGTTAACTATTAAAT-AT--AT-TAC-----AGT--AGAAATATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAAAG
gi|18 : cccaaatggaaccagtttcgcaacaattccgagaaccagacggtgtaacagtaaacattgcccgattactgggaaacccaaaatgcaatcgcttatctgaagccaggatacaatatcttcgTGAC-A---AATAAAT-ATG----GTAAATTGACTAA--T---AAATATATATTAGCACA-TCA----GTTA--G----A----AT-----A------TAT-----------ATACGTTATG-C-AAC--------C---A---AA-CT-----AT-----AT-------TG-----ACGT-TAT--GCAAAC----------A--A---------------TAT-----A---T--------------------------------------------A---TATA---T-TAT--A-CATTAGACACTC---------GACACATTT--------TGCAC-A-CGG--TC---ATT---GC--TACCTA--TTTTGATGTACTACAG
gi|19 : gttatatttacatcgtaatgcaatcgtatgaagccccaaacgtgattatattcagtgacataaatgaattatatgtgtaaaagtatacactctACC-AA-TTTTG------CACA-CTG---------CCCTCATGAAAT-A--CCTACGTCATTGA---A---T--GTT---G-CGTTATTCTCAGTCAGAA---TATCGC------CGTCTTTGAAGC-TCCTTG-TT-GAAAG---------------------AGAAGATTCTAAGAAGTTCCTTAGGGGGAGATCGGAGATGGTAAAT-TAAAATTATTATT-TATG-TGGAGT--AGAACTACAATTTGGTTGTTTAATTGTGTTTTATGGATGAATAA
gi|2 : acacgGTGAC-A---AATAAAT-GTG----GTAAACTGACTAA--T---ATATATATGGC---ACA-CCG----GTAA--A----A---TAT-----A------T-T-----------ATACGTTATG-CACAC--------CGGTA---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCACACCGGTA-A---A--A---------------TAT-----A---T-A----------T-----ATGCAAACA---------------ACA---TATA---T-TATA-AACGTTATGCACAC---------GATCCTTTT--------TGCACTA-AGG--CC---CTC---AC--TATCGA--TTTTGATGTACCACAGCTGATT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CATTCTGCCAAGTCTGAC---TATCGCA-A--CCGTCTTTGAAGC-TCCATG-TT-GAAAG---------------------GGAAGATTCTAAGAGTTTTTTTAGGGAGAGGTCGGACATGGGAAATATAAAAT-ATTAAT-CATG-TGGAGT--AGAACTACAATTTAGTCATTCAACTGTGTTTTATCGAGGAATAATAAAATGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATATGTTTCAAAACGAAGACATATTTATTACCATAGGCATCAGAGTCGGAGCAGTAGGGTTGGGTAATGTGGCCCAATATTCCAATTTTTTTACATTCTTTTAAACCACACTTCTTAGTGCAAAATTGAAATATCTCCTCAAACATTGGAAATGACTAAGCTGTCAGTTGATGA---ACAATGGCGAATTGCACCCG-AAAT-G---C---AG-ATACATTGTACTTCTATATATT------TCTATATCATAATATGTCCAAT-GGCGGTTTGCACCAGCAAAAGGGTCTCGAAATA-A-AAACACTAAGTgacggagcgttaggat
gi|20 : ccCTTGATC-TACGA---------------------AGATTATTGTTAGAGGGTCTTTAGGGG--------AGATGGAAAATATAAACT-ATTAAC-TATA-T-AAGTGAAGGAAAACAATTTAGTTATTAAATTGTtc
gi|21 : ttgagaaaatctagaagcaatccgtgatcagaccaaaggctgcaatacctgaaaagaacaccgcagaaagagatacgtcatagttttttgccgtgtttaatccagacaAA--T---ATTTATATGTC---GT--TCG----TTAC--A----A----AT-----A------TAT-----------ATACGTTATG-CACAC--------t
gi|21 : aaatgtttttttagatatataaaggaaaatacaa---------------AAA---TATA---T--ATA---CGTTATGCACAC---------GATCCTTTT--------TGCAC-A-CGG--CC---CTC---AT--TACC-AATTTTTAA-GTACCATAACTGA-TAT-GTACGCTC--GAAGC-G--CATACGTCATTGA---T---T--GTT---G-CCTTCTGCTCAATCAAAC---Tgatcctttttgcacacggccctcattaccaatttttaagtaccataactgatatgtacgctcgaagcgcatacgtcattgattgttgccttctgctcaatcaaact
gi|22 : aaatgtttttttagatatataaaggaaaatacaaaatatttatatgtcgttcgttacCGGAGCGTTAGGATTGG-TGATGTAGCCCAATACTCCGAATTTTTAACATTTT----AACCACGCTTCTTGGAGCGAAGTTGACATATCCCCTTGAACATCCGAGATGACTAAGCTATCAGTTGAT
gi|24 : gaA----T---TTTGTTAAGAAATA-GTCTCGAAAAGAAGACATATTTGTCACCATCGGCATAAGAGTCGGAGCGAAAGAGTT-GGTGATGTAGCCTAATATTCC
gi|25 : aA--A----A----AT-----A------CAT-----------ATACGTTATG-TAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--GTAAACt
gi|3 : aacGAC-A---ACAAAAT-ATG----GTAAACTGACTA---T---ATATATAGGC----AAA-TCG----GTAA--ATAT-A---TAT-----A------TAT-----------ATATGTTATG-CAAAC------------A---AA-AT-----AT-----AT-------------------------------------------A---------------TAT-----A---C-A----------T----TATGCAAACA---------------AAA---TATG---T--ATA---CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--C-------------------A--TTTTGATGTACCACAGCTGA-T-TTGTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--TTG---G-CGTTCAACTCAGTCAGAC---TATCGCA-G--CCGTCTTTGAAGC-TCCTTG-TT-GAAAGTAAAGAATTTTAGAAGAAAAGAGATGATTCTAAGAGGTTCTTTAGTGGGAGATCGGAGATGGGAAATATAAAAT-GTTAACGTATG-TGGAGA--AGAACTACAATTTGATTATTCAATTATGTTA-ATAGATACATAATAAA------------------AAAA-GCCTT--CTTCTGTTGATGC---AAAGCAATAAT--T---TTT-TTAAGAA-TACGTCTCGAAAAGAAAACATGCTGATCACCAAAGGCATGGGGGTCGGAGCGGTAGGGTTGGGTGAGTTGGTCCAATATTCCGATTTGTTTACATTCTTTT-AACCACACTTCATAGGGCAAAATTGAAATATCCCCTGTAACATTCGAAATGGCTAACATGTCAGTTGATG---CACAATGACAG--T--------AAAT-GTGTCTC-AATATACA-GGTACTACTATATATT------TCTATATCAGATTATGaa
gi|4 : ctatgagaggtcaaacgtgactatattcagtgacataaatatatatgtttaagtaaaaaatatacattttcGTGAC-ATAAAAAAAGT-GTT----GTAAAC-------------ATATATACGTT---TAA--------GTAA--A----A---TAT-----A--------T-----------ACACCCTCGA-CAAAT----------------AA-AT-----ATGGNNNNN-------NN----NNNNN-NNN--NNNNNNNNNNN-N---N--N---------------NNN-----N---N-N----------N----NNNNCAAACA---------------AAA---TATA-----TGT--A-CGTTATGCAGAC---------
gi|4 : tatgaggtgccaaacgtgacaatattcaGAC-A---AATAAAT-ATG----GNNNNNNNNNNNN--N---NNNNNNNNNNN---NNN-NNN----NNNN--N----N---NNN-----N-------------------------------CAAAC------------A---AA-AT-----AT-----AT--------G----TACGT-TAT--GCAGACCGGTA-cggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|4 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctc-G--CATACGTCTTTGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC----AT-------------TTTGA-----------TT-GACGA---------------------AGATTATTGTTAGAGGATTTTCAGAGGAAGGT-------GGGAAATGTAAACT-ATAAGT-AAAT-TAAAAT--AGAAATATAATTTAATTATCAAAT--TGTTTTATGGACGAATAATAAAGCGCACAGAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcgacaaataaatatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaacaaaatatatgtacgttatgcagaccggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagaA--T---ACATATACGTT---TAA--------GTAA--A----A---TAT-----A------TACTACCTCGAAAAATACATTATGGTAAAC--------G---G---ACTAT-----AT-----AT-------TA----TAT-----T--GCACATTGGTA-A---A--AATTCATAAACACT--TAT-----A---TTG----------T----TATGCAAACA---------------ATA---TATAATTT-TATATA-CGTTATGCAAAC---------AAacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttGAA-A---AATACATTATG----GTAAACGGACT-A--T---ATAT-TATATTGC-ACA-TTG----GTAA--A----AATTCAT-----AAACACTTAT-----------AT-TGTTATG-CAAAC-----------------A-AT-----AT-----ATAATTTTATA----TACGT-TAT--GCAAAC----A-A---A--A---------------TAT-----T---T-A----------T----TATATATACGTTATGCATATCGGTTAAA---TATA---G-TAT--A-CGTTATGCAAAC---------AAaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcTG----GTAAA------AA--TTC-ATAAACAC-TT---ATA-TTGTTATGCAA--ACAATA---TAT-----AATTT--TAT-----------ATACGTTATG-CAAAC------------A---AA-AT-----ATTTATTATA------TA----TACGT-TAT--GCATATCGGTT-A---A--A---------------TAT-----AGTAT-ACG--------T----TATGCAAACA---------------AAA---TA-----T-TATATA-CATTATACAAAC---------AAAATATATATACAATATGCAC-A-CGA--CC---CCCAGAGCGGTACC-A--GTTTaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacatTATATACGTT---ATG-CAA----ACAA--A----A---TATTTATTA------TAT-----------ATACGTTATG-CATAT--------C---GGTTAA-AT-----AT-----AG-------TA----TACGT-TAT--GCAAAC----A-A---A--A---------------TATTATATA---C-A----------T----TATACAAACA---------------AAA---TATA---TATACA-A----TATGCACAC---------GACCCC-------------CAG-AGCGGTACCAGTTTC---GC--AACA-A--TTCTGA-GAACCAcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataatttCA-GAAAGAG--CCCACGTCATCGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC---GCTTGAACA--CCAT-TTCGAAGC-TTTTGA-TT-GACGA---------------------AGATTATTGTTCGAGAGTC-TTAAGGGGAG---GGA----GGAAATGT-TAAC-CTTAAG-TGTATTAGAGT--AGAAATATAATATAGTTATTAAGTTGgacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|6 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataattttatatacgttatgcaaacaaaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgC-A---AATAAAT-ATG----GTTAAATGACT-A--T---ATTTATATATT---ATGTTCG----GTAA--AT---A---TAT-----A------TAT-----------ATA
gi|6 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgCTCA-GAAAGAG--CCTACGTTATTGA---T---T--TTTGGCG-CGTT---CTCATCCAGACGCGTAT---A-T--CCCTTTTCGAAAC-TT-----TT-GACattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttctcagaaagagcctacgttattgatttttggcgcgttctcatccagacgcgtatatcccttttcgaaacttttgacatatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgcaaataaatatggttaaatgactatatttatatattatgttcggtaaatatatatatataattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttAA--T---ATATATACGTT---TAA--------GTAA--A----A----A------A------TAT-----------ACACCTTCAA-CAAATAAATATGGT---A---AA-ATGACTAAT-----AT-------AA----TATATATATTGGCACATCGGTA-A---A--A---------------TAT-----A---T-AAATATATACGT----TATGCAAAAA---------------AAA---TATA-----TAT--A-TGTTATGCAAACCTAATATATAATACTTTA--------TGCAC-A-TGA--CC---Catatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaAC-A---AATAAAT-ATG----GTAAAATGACTAA--TATAATATATATATTGGCACA-TCG----GTAA--A----A---TATATAA-A------TAT-----------ATACGTTATG-CAAA---------A---A---AA-AT-----AT-----A--------TA----TATGT-TAT--GCAAACC--TA-A---T--A---------------TATA----A---T-ACT--------T----TATGCAcaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaAAA-GCAATCACTTGT-CTGAGGCCAGGATGCAATA----C---TTT-CGCAGAAAGA-GCCTcatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctCA-GAAAGAG--CCTACATCATTGA---T---TTTGTC---G-TGTTAT---CATCCAGAC---GAGTGTA-C--CCCATTTCGAAGC-TTTTGA-TT-GATGA---------------------AGATAATTGTTAGAGGGTCGTAAAGGGAAGG-------TGGGAAATGTAAATT-ATTAAG-TATATTAGAAT--AGAAACATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|9 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgT-TAT--GAAAAC----A-A---A--A---------------TAT-----AAA-T-ACG--------T----TATGGAAACA---------------AAAAAATATA---T------A-CGTTATGCACAC---------GACCCTT----------------------------------------------TTTTGA-A---CACGGCC------------CTCATGAAAT-G--CCTACGTCATTGA---A---T--GTT---G-TGTTCTGCTCAGTCAGAC---TATCGCC-A--CAGTATTTGAAGC-TCCGTG-TT-GAAAG---------------------AGAAGATCATTAGAGGTTCTTTAGGGGGATATCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAACTACAATTT------------------TATGGATGAAAAATACAGCGCACGGAATT--AAAAAAAACACCTTTACTTGTGTTGATGC---AATGCAATA----TA--CTT-TTAAGAGATA-GTCTCGAAAGGA---CATGTCTATCACCATAGGCATAGCCGCCGGAGCGTTAGAGTTAA-TGATGTGGCCCTATATTCCGAATTTTTGACATTATTT--AACCACACTTCCTATGGCAAAA--GAGATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTg
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AATGACATAATTACAGAGATCCACAGATCTAAGATACCGATCTTCTATACTAATTTAATATATATGGCTGAAATTTCGAGTGGTATCTTTTATAACTTTTTGAACCACTGTCTGAAAATAATAATTTTGGTAACATTGGAATATTAAGCTGACATTTGAATTAATTGACATCTTTTAAAATTGTTACCAGTCATGATTTATTTTCGTTCTGAGTTAAAAAATATTACAGATTGGAAAAAATGTATGCATTTTTAAAAAGAAGTATTTTTTGAAACAAAAAAGGTACCATACTAGTTTCAACAAAGTCTTTTACCTTTTTAACTATCATATCATTTAAATATAAATTTTGTACAGAAAGATAAAGAAGTGAATAATCCATTGGTAGTGAACATTTTTGATTTTTTTTTTTTAAAAATTATGTTGCTTAAAATTTAAAAGAAAACATTATCATGAACAATTTTATGCAGTATTTTTATGCTTTTGTTGTGAAGT
Unaligned ( gi|10 ): TCCATACATAACTATAGTGACTTAATTACAGATGATGGCAGGCTAATAGCAATATAATGCACACGGCTGAAATTTCAGGTGGCATCTTTAGTATTTCTTTGAATCTTTGTCTGAATGAAATAATTTTGGTACGAAAGTTAAGCTGATAAAACTGATAACATTTCCAACTATCAATTATTTAATATTTTTCTTCTGAATTTAAATTATTACGGATTGAAAATGAAAATTGTTGAAATTTTTTACGAAATATTTTTTTTATTTTAACAAAAAATGGTAGTGTACTTGATTTAACAAATACATTTATCAACAAACAATAGAAATAAAAAAAAATATGTAGAAAGATGACAAAGTAAGTTTCCATTGGTGGCGAAAATTTCATATTTCATATAACATTTCCATAGATAATTTACATTTCCGTGGATAACTTACCTTTCCATGGACAATTTCATCAATACTGAGCTCTGTGTATTCATCCTGAAGTA
Unaligned ( gi|16 ): ATATATATGCATATAAAAGTAAAATATAGAATATCTAACGTGATATGTAAGATAAATATATTTATATATATGTGTGTTTTGTGTATATATAACAAAACACGTTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGAAAAAACACAAAATATTGATATGTATGTCGTCCGTTACAAAAAAAATATAGGAAAAACCCAGATGCAATCTGTGATCGGACCCAAGGCTGCAATACCCACAAAGAACATGCTACGTTGTTGACTTTTGTCGTGTTTCCAGACGCTTGCGCCCATTTTCGTAGCATTTGATT
Unaligned ( gi|23 ): TGAGGCGATGAACGTCACTATATTCGGAGTATATACTGTGTTCGTGATTATATATATACTTTTTAGTAAAAAAAATACACCCTCGACAAATAGATATAGTATA
Unaligned ( gi|26 ): ATTTACTGATTTAATTCTTAAATATATGGACGAGTGTATT
Unaligned ( gi|27 ): ACAGTATACTCTTACCAATACTGTTAACGAA
Alignments
lowQualScore : 11111111111111 33333333333333 111111111 111111111111 33333333333333333 222222222222222 44444444444444444444444444444444444444444444444444444444444 111111111111111 333333333333 111111111 1111111111 222222222222222222222 1111 3333333333 11 11 111 22222222222222 222222222222222222 111 11 111111 111 22222222 1 1 11 2222 111 33333333 1 1 111 222222 1 111 11 111
lowQualScore : 3 555 44 3 6666 22222222222222 11111111111111 22 333333333 000000000000 99999999999 1 88888888888888888 2 77777 222222222222222 4444 1 22 1 33333333333333333333333333333333333333333333333333333333333 2 555555555555555 2 444 555555555555 000000000 7777777777 1 4 4 66 999999999999999999999 5555 7777777777 22 77 66 888 444 33 444 7 777 1 00000000000000 2 2 2 2 777777 2 2 222222222222222222 5555 22 2 1 1 7 000 1 2 2 5 22 1 33 1 2 0 1 0 222222 5 0 000 44444444 5 7 1 1 0 6 1 1 1 0 44 9999 2 3 2 555 66666666 0 0 000 888888 3 6 444 6 88 7 555
lowQualScore : . ... .. . .... .............. .............. .. ......... ............ ........... . ................. . ..... ............... .... . .. . ........................................................... . ............... . ... ............ ......... .......... . . . .. ..................... .... .......... .. .. .. ... ... .. ... . ... . .............. . . . . ...... . . .................. .... .. . . . . ... . . . . .. . .. . . . . . ...... . . ... ........ . . . . . . . . . . .. .... . . . ... ........ . . ... ...... . . ... . .. . ...
lowQualScore : 3 888 66 3 5555 55555555555555 33333333333333 88 000000000 333333333333 00000000000 9 77777777777777777 0 00000 333333333333333 2222 9 66 7 77777777777777777777777777777777777777777777777777777777777 5 666666666666666 5 444 111111111111 000000000 3333333333 1 4 4 11 666666666666666666666 5555 9999999999 44 11 99 888 444 44 444 5 000 0 66666666666666 7 0 7 5 222222 5 5 000000000000000000 3333 00 5 0 0 0 444 5 4 7 3 11 7 99 0 0 1 4 2 999999 7 1 000 11111111 7 1 0 0 1 6 0 0 7 3 22 5555 5 2 5 555 88888888 0 0 555 888888 3 7 000 7 33 3 333
consensus : NNGTGAC-A---AA--TAAAT-ATG----GTAAACTGACTAA--T---ATATATACGTT---ANA-TCG----GTAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------C---A---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATG-CAAACA---------------A-AA---TATA---T-TATA-A-CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CC---CTC---GC--TACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
Reference ( family-1821 ) : NNGTGAC-A---AA--TAAAT-ATG----GTAAACTGACTAA--T---ATATATACGTT---ANA-TCG----GTAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------C---A---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATG-CAAACA---------------A-AA---TATA---T-TATA-A-CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CC---CTC---GC--TACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
gi|1 : GTAAC-A---AAAATACAT-ATG----TTG--TTTATGAA--T---ATAAATACGTT---TAA--------GTAA--A----A----AT-----A------TAC-----------A-ACCTCG------AC----------------AA-AT-----AC-----AT--------A----TA---------GTAAACTGTTA-A---A--A---------------TAT-----A---T-A---------------TACGTTATACA---------------ATAA---TATA---TGTAT--A-CGTTATGGACAC---------
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcaGAC-A---AA--TACAT-ATA----GTAAACTG-TTAAAAT---ATATATACGTT---ATA--CA----ATAA-----------TAT-----A------TGT-----------ATACGTTATG-GACAC--------C---AGC-AA-ATT----AT-----AT--------A----TACGT-TAT--GCAAA-CAATACA---A--A---------------CAT-----A---T-A----------cagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcAC-G--C-TACGTCGTTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TATCGCA-A--CCTTCTTTTAAAC-TCCT------TG-TT-GAA-----------------AAA----GAAGAT-TCTAAGCGGTTCTTTAGGGGTAGATCGGAGATCGGAAATATAAAAT-ATTGAT-TATG-TGGAGT--AGAACTGCAATTTAGTTATTTAATTGTGTTTTATGGATTAATAATTAAACGCACGGAATTTT--AAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----TATCTTT-TCATGAAATA-GTCTCG---ATAAGACATATTTATCACCATAGGCATATGATTCGGAGAGTTAAGGTT-GGTGATGTGGCACAAAATTCTGATTTTTTTACACTTTTTA-AACCACACATCTAAGGGCAAAATTGAGATATCCCCTCAAACATTCGAAATGACTAAGTTGTC---TAATGATCCACAATGACGGATTGCACCAGTAAATGG-GTCTCGAA-ATGCA-GTTACTACTATAAATC------TCTATATCAGATTATGCTAAAT-GACGGATTGCACCA--TAAAG----C--AAA-A-GCAAATACTAcgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatTATCAGATTATGC--TA-AATGACGGATTGCACCAT-AAA----G---C-AA-AAGCA-AATACTACTGTATATTAGTATTTCAATATCAGATTATGTCCAATCGAC-GATTGCACCAGTGAATGGGTCT--AAATATGCAAATACTAAGTctgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|11 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctcta------TAT-----------ATACGTTATG-GAAAC-----------------A-AT-----AT-----ATA------TA----TACGT-TAT--GCAAAC------A---A--A---------------TAT-----A---C-A----------TACGTTATG-CAAAGA---------------A-AA---TATA-----TAT--A-CGTTATTCACAA---------GACCCactgtatttt
gi|11 : atA-AAAAA-G--TCTACGTCATAGATTTT---T--GTC---G-TGTTC-GCT--TCCAGAC----A-CGTG-AACCCCTTTTCGGTGC-TTTT------GA-AT-GAC-----------------AAA----AAATAT-TGTAAGAGGGTCATTAGGGGAAG--------TGGGAAATGTAAACT-ATTAAG-TATATTAGAGT--AGAAATATAATTTAGTTATTAAATT-T-TTTTATGGATGAATAATcaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaaaaagtctacgtcatagatttttgtcgtgttcgcttccagacacgtgaaccccttttcggtgcttttgaatgacaaaaaatattgtaagagggtcattaggggaagtgggaaatgtaaactattaagtatattagagtagaaatataatttagttattaaatttttttatggatgaataatcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : attatatacgttatggaaacaatatatatatacgttatgcaaacaaatatacatacgttatgcaaagaaaatatatatacgttattcacaagaccccaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaAA--T---ATATATACGTT---TAA--------GTAA--A----A---TAT-----A------TAC-----------ATCCTCGA---CAAAT----------------AA-AT-----AT-----GG-------TAAACTCACAT-TG---GCACATCGGTA-ATAAATTA---------------TAT-----A---T-ACG--------T----TATG-CAAACA---------------A-AA---TATA-----TAT--A-CGTTATGCACAC---------GACCCcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaGAC-A---AA--TAAAT-ATG----GTAAACTCAC-------------AT-TGGC---ACA-TCG----GTAATAA----A---T-T-----A------TAT-----------ATACGTTATG-CAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--GCACACcaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcCA-GAAA--GAACCTACGTCATTGC---T---T--TTT---GTCGTGTT-CTCATCCAGAC----------------G-CTTTGAAGCAT--T------TG-TTTGAT-----------------GAA----GATTAT-TGTTAGAGGGTCTTAATGGGAAGG---GTGAT-----ATGTAAGCT-ATAAGTGTAT--TAGAGT--AGAAATATAATATAGTTATTTAATTGTgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|13 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcgacaaataaatatggtaaactcacattggcacatcggtaataaattatatatacgttatgcaaacaaaatatatatacgttatgcacacgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgTGACTA---CA--TATAT-ATGTTTGGTAAA------AA--T---ATATATACGTT---ATG-CAA----ACAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------CTG-C---AA-AT-----AA-----ATA------TA----TACGT-TAT--GCACACCGGTA-A---A--AATATACATACCGGGGTAT-----A---T-AAG--------T----TATG-CAAACA---------------A-TA---TATA---T------A-CGTCATGCAAAC---------AA
gi|13 : aTATATAAGTT---AT---------GCAA--A----C---AAT-----A------TAT-----------ATACGTCATG-CAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--CTACACaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|13 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggGCGCA-GAAA--GAACCAACGTCATTGA---TTTGT--GTC---G-TGTT---CTCATCCAGAC---GCGTGTA-T--CCCTTTTCAAGGC-TTTT------GA-TT-TAC-----------------GAA----GATTAT-TGTTAAAGGGTCTTAAGGGGTAGGTGGGAAAT---AAATAC----T-ATTAAG-TATgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|14 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggtatataagttatgcaaacaatatatatacgtcatgcaaacaaaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacct-GTACCACAGCTGAGT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TTTCGCA-A--CAGTCTTTGAAGC-TTCG------TG-TT-GAA-----------------AGA----GGAGAT-TATAAAAGGTTCTTTAGGGG-AGATCGGAGATGGGAAATATAAAAT-ATTAAT-AATG-TGAAGT--AAAACTACAATTTAGTTATTCAATTGTGTTTTATGGACGAATAATAAGGCGCACGCAA--TTAAAAAAAA-A-CTTTGCTTGTGTTGATAC---AATGCAATATATTT---TTT-TTAAGAAACAGGGATCGAAAAGAAGACATATTTATCACCATAGGAATATGAGTCGGGGTGGTAGG---CGATGATGTGGCTCAATATTCCGCATTTTTAACA--TTTTT-AACCAGACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTTGAAATGACTAAGCTATAAGTTGATG
gi|15 : G-CAAAC-----------------A-AT-----AT-----AT-------AA----TATGT-TAT--GAAAAC----A-A---A--A---------------TAT-----A---T-A----------TACGTTATG-AAAACA---------------A-AA---TATA---A--ATA---CGGTATGCACAT---------GTCTCTTTT--------T-CAA-A-CGA--CC---CTG---AC--TACC-A--------------AAAGCT--------------------AC-G--CCTACGTCATTGA---T---T--GTT-------------TTAGTCAGAC---TTTCGCA-A--CCGTCCTTGAAGC-TCCT------TG-TT-GAA-----------------AGA----GAAGAA-TCTAAGAGGTTCTTTACGGGT-GATCGTAGATGTGAAATATAACAT-ATTAAT-TATG-TGGTGT--AGAACTACAATTTACTTATTTAATTGTGTTTTATGGATGAATAATAAAGCGCACGGA--TTTAAAAAAAA-GCCTTTATTTTTGTTGATGC---AATGCAATA----T---c
gi|17 : CA-GAAAGAG--CATACATCAT-GAATTT---T--GGC---G-CGTTCT---CATCCAGAC---GCGTGTA-T--CCCTTTTCGAAGC-TTTT------GG-TT-GAC-----------------GAA----GATTAT-TGTTAGAGGGTATTAAAGGGAAGGTGGGAAATGTTAACTATTAAAT-AT--AT-TAC-----AGT--AGAAATATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAAAG
gi|18 : cccaaatggaaccagtttcgcaacaattccgagaaccagacggtgtaacagtaaacattgcccgattactgggaaacccaaaatgcaatcgcttatctgaagccaggatacaatatcttcgTGAC-A---AA--TAAAT-ATG----GTAAATTGACTAA--T---AAATATATATTAGCACA-TCA----GTTA--G----A----AT-----A------TAT-----------ATACGTTATG-C-AAC--------C---A---AA-CT-----AT-----AT-------TG-----ACGT-TAT--GCAAAC----------A--A---------------TAT-----A---T----------------------------------------------A---TATA---T-TAT--A-CATTAGACACTC---------GACACATTT--------TGCAC-A-CGG--TC---ATT---GC--TACCTA--TTTTGATGTACTACAG
gi|19 : gttatatttacatcgtaatgcaatcgtatgaagccccaaacgtgattatattcagtgacataaatgaattatatgtgtaaaagtatacactctACC-AA-TTTTG------CACA-CTG---------CCCTCATGAAAT-A--CCTACGTCATTGA---A---T--GTT---G-CGTTATTCTCAGTCAGAA---TATCGC------CGTCTTTGAAGC-TCCT------TG-TT-GAA-----------------AGA----GAAGAT-TCTAAGAAGTTCCTTAGGGGGAGATCGGAGATGGTAAAT-TAAAATTATTATT-TATG-TGGAGT--AGAACTACAATTTGGTTGTTTAATTGTGTTTTATGGATGAATAA
gi|2 : acacgGTGAC-A---AA--TAAAT-GTG----GTAAACTGACTAA--T---ATATATATGGC---ACA-CCG----GTAA--A----A---TAT-----A------T-T-----------ATACGTTATG-CACAC--------CGGTA---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCACACCGGTA-A---A--A---------------TAT-----A---T-A----------T-----ATG-CAAACA---------------A-CA---TATA---T-TATA-AACGTTATGCACAC---------GATCCTTTT--------TGCACTA-AGG--CC---CTC---AC--TATCGA--TTTTGATGTACCACAGCTGATT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CATTCTGCCAAGTCTGAC---TATCGCA-A--CCGTCTTTGAAGC-TCCA------TG-TT-GAA-----------------AGG----GAAGAT-TCTAAGAGTTTTTTTAGGGAGAGGTCGGACATGGGAAATATAAAAT-ATTAAT-CATG-TGGAGT--AGAACTACAATTTAGTCATTCAACTGTGTTTTATCGAGGAATAATAAAATGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATATGTTTCAAAACGAAGACATATTTATTACCATAGGCATCAGAGTCGGAGCAGTAGGGTTGGGTAATGTGGCCCAATATTCCAATTTTTTTACATTCTTTTAAACCACACTTCTTAGTGCAAAATTGAAATATCTCCTCAAACATTGGAAATGACTAAGCTGTCAGTTGATGA---ACAATGGCGAATTGCACCCG-AAAT-G-----C-AG-ATACATTGTACTTCTATATATT------TCTATATCATAATATGTCCAAT-GGCGGTTTGCACCAGCAAAAGGGTCTCGAAATA-A-AAACACTAAGTgacggagcgttaggat
gi|20 : ccCT------TGATC-TAC-----------------GAA----GATTAT-TGTTAGAGGGTCTTTAGGGG--------AGATGGAAAATATAAACT-ATTAAC-TATA-T-AAGTGAAGGAAAACAATTTAGTTATTAAATTGTtc
gi|21 : ttgagaaaatctagaagcaatccgtgatcagaccaaaggctgcaatacctgaaaagaacaccgcagaaagagatacgtcatagttttttgccgtgtttaatccagacaAA--T---ATTTATATGTC---GT--TCG----TTAC--A----A----AT-----A------TAT-----------ATACGTTATG-CACAC--------t
gi|21 : aaatgtttttttagatatataaaggaaaatacaa---------------A-AA---TATA---T--ATA---CGTTATGCACAC---------GATCCTTTT--------TGCAC-A-CGG--CC---CTC---AT--TACC-AATTTTTAA-GTACCATAACTGA-TAT-GTACGCTC--GAAGC-G--CATACGTCATTGA---T---T--GTT---G-CCTTCTGCTCAATCAAAC---Tgatcctttttgcacacggccctcattaccaatttttaagtaccataactgatatgtacgctcgaagcgcatacgtcattgattgttgccttctgctcaatcaaact
gi|22 : aaatgtttttttagatatataaaggaaaatacaaaatatttatatgtcgttcgttacCGGAGCGTTAGGATTGG-TGATGTAGCCCAATACTCCGAATTTTTAACATTTT----AACCACGCTTCTTGGAGCGAAGTTGACATATCCCCTTGAACATCCGAGATGACTAAGCTATCAGTTGAT
gi|24 : gaA----T---TTTGTTAAGAAATA-GTCTCGAAAAGAAGACATATTTGTCACCATCGGCATAAGAGTCGGAGCGAAAGAGTT-GGTGATGTAGCCTAATATTCC
gi|25 : aA--A----A----AT-----A------CAT-----------ATACGTTATG-TAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--GTAAACt
gi|3 : aacGAC-A---AC--AAAAT-ATG----GTAAACTGACTA---T---ATATATAGGC----AAA-TCG----GTAA--ATAT-A---TAT-----A------TAT-----------ATATGTTATG-CAAAC------------A---AA-AT-----AT-----AT-------------------------------------------A---------------TAT-----A---C-A----------T----TATG-CAAACA---------------A-AA---TATG---T--ATA---CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--C-------------------A--TTTTGATGTACCACAGCTGA-T-TTGTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--TTG---G-CGTTCAACTCAGTCAGAC---TATCGCA-G--CCGTCTTTGAAGC-TCCT------TG-TT-GAAAGTAAAGAATTTTAGAAGAAAAGAGATGAT-TCTAAGAGGTTCTTTAGTGGGAGATCGGAGATGGGAAATATAAAAT-GTTAACGTATG-TGGAGA--AGAACTACAATTTGATTATTCAATTATGTTA-ATAGATACATAATAAA------------------AAAA-GCCTT--CTTCTGTTGATGC---AAAGCAATAAT--T---TTT-TTAAGAA-TACGTCTCGAAAAGAAAACATGCTGATCACCAAAGGCATGGGGGTCGGAGCGGTAGGGTTGGGTGAGTTGGTCCAATATTCCGATTTGTTTACATTCTTTT-AACCACACTTCATAGGGCAAAATTGAAATATCCCCTGTAACATTCGAAATGGCTAACATGTCAGTTGATG---CACAATGACAG--T--------AAAT-GTGTCTC-AATATACA-GGTACTACTATATATT------TCTATATCAGATTATGaa
gi|4 : ctatgagaggtcaaacgtgactatattcagtgacataaatatatatgtttaagtaaaaaatatacattttcGTGAC-ATAAAA--AAAGT-GTT----GTAAAC-------------ATATATACGTT---TAA--------GTAA--A----A---TAT-----A--------T-----------ACACCCTCGA-CAAAT----------------AA-AT-----ATGGNNNNN-------NN----NNNNN-NNN--NNNNNNNNNNN-N---N--N---------------NNN-----N---N-N----------N----NNNN-CAAACA---------------A-AA---TATA-----TGT--A-CGTTATGCAGAC---------
gi|4 : tatgaggtgccaaacgtgacaatattcaGAC-A---AA--TAAAT-ATG----GNNNNNNNNNNNN--N---NNNNNNNNNNN---NNN-NNN----NNNN--N----N---NNN-----N-------------------------------CAAAC------------A---AA-AT-----AT-----AT--------G----TACGT-TAT--GCAGACCGGTA-cggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|4 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctc-G--CATACGTCTTTGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC----AT-------------TTTGA-----------------TT-GAC-----------------GAA----GATTAT-TGTTAGAGGATTTTCAGAGGAAGGTGGGAAATGTAAACTATAAG-T-A--AAT-TA-----AAAT--AGAAATATAATTTAATTATCAAATTGT--TTTATGGACGAATAATAAAGCGCACAGAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcgacaaataaatatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaacaaaatatatgtacgttatgcagaccggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagaA--T---ACATATACGTT---TAA--------GTAA--A----A---TAT-----A------TACTACCTCGAAAAATACATTATGGTAAAC--------G---G---ACTAT-----AT-----AT-------TA----TAT-----T--GCACATTGGTA-A---A--AATTCATAAACACT--TAT-----A---TTG----------T----TATG-CAAACA---------------A-TA---TATAATTT-TATATA-CGTTATGCAAAC---------AAacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttGAA-A---AA--TACATTATG----GTAAACGGACT-A--T---ATAT-TATATTGC-ACA-TTG----GTAA--A----AATTCAT-----AAACACTTAT-----------AT-TGTTATG-CAAAC-----------------A-AT-----AT-----ATAATTTTATA----TACGT-TAT--GCAAAC----A-A---A--A---------------TAT-----T---T-A----------T----TATA-TATACGTTATGCATATCGGTTA-AA---TATA---G-TAT--A-CGTTATGCAAAC---------AAaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcTG----GTAAA------AA--TTC-ATAAACAC-TT---ATA-TTGTTATGCAA--ACAATA---TAT-----AATTT--TAT-----------ATACGTTATG-CAAAC------------A---AA-AT-----ATTTATTATA------TA----TACGT-TAT--GCATATCGGTT-A---A--A---------------TAT-----AGTAT-ACG--------T----TATG-CAAACA---------------A-AA---TA-----T-TATATA-CATTATACAAAC---------AAAATATATATACAATATGCAC-A-CGA--CC---CCCAGAGCGGTACC-A--GTTTaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacatTATATACGTT---ATG-CAA----ACAA--A----A---TATTTATTA------TAT-----------ATACGTTATG-CATAT--------C---GGTTAA-AT-----AT-----AG-------TA----TACGT-TAT--GCAAAC----A-A---A--A---------------TATTATATA---C-A----------T----TATA-CAAACA---------------A-AA---TATA---TATACA-A----TATGCACAC---------GACCCC-------------CAG-AGCGGTACCAGTTTC---GC--AACA-A--TTCTGA-GAACCAcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataatttCA-GAAAGAG--CCCACGTCATCGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC---GCTTGAACA--CCAT-TTCGAAGC-TTTT------GA-TT-GAC-----------------GAA----GATTAT-TGTTCGAGAGTC-TTAAGGGGAG---GGA----GGAAATGT-TAAC-CTTAAG-TGTATTAGAGT--AGAAATATAATATAGTTATTAAGTTGgacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|6 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataattttatatacgttatgcaaacaaaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgC-A---AA--TAAAT-ATG----GTTAAATGACT-A--T---ATTTATATATT---ATGTTCG----GTAA--AT---A---TAT-----A------TAT-----------ATA
gi|6 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgCTCA-GAAAGAG--CCTACGTTATTGA---T---T--TTTGGCG-CGTT---CTCATCCAGACGCGTAT---A-T--CCCTTTTCGAAAC-TTTTGACATATA-TT-AAG-----------------AAA----TATAATATGTAAGAattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttctcagaaagagcctacgttattgatttttggcgcgttctcatccagacgcgtatatcccttttcgaaacttttgacatatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgcaaataaatatggttaaatgactatatttatatattatgttcggtaaatatatatatataattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttAA--T---ATATATACGTT---TAA--------GTAA--A----A----A------A------TAT-----------ACACCTTCAA-CAAATAAATATGGT---A---AA-ATGACTAAT-----AT-------AA----TATATATATTGGCACATCGGTA-A---A--A---------------TAT-----A---T-AAATATATACGT----TATG-CAAAAA---------------A-AA---TATA-----TAT--A-TGTTATGCAAACCTAATATATAATACTTTA--------TGCAC-A-TGA--CC---Cattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaAC-A---AA--TAAAT-ATG----GTAAAATGACTAA--TATAATATATATATTGGCACA-TCG----GTAA--A----A---TATATAA-A------TAT-----------ATACGTTATG-CAAA---------A---A---AA-AT-----AT-----A--------TA----TATGT-TAT--GCAAACC--TA-A---T--A---------------TATA----A---T-ACT--------T----TATG-CAcaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaAAA-GCAATCACTTGT-CTGAGGCCAGGATGCAATA----C---TTT-CGCAGAAAGA-GCCTcatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctCA-GAAAGAG--CCTACATCATTGA---T---TTTGTC---G-TGTTAT---CATCCAGAC---GAGTGTA-C--CCCATTTCGAAGC-TTTT------GA-TT-GAT-----------------GAA----GATAAT-TGTTAGAGGGTCGTAAAGGGAAGG-------TGGGAAATGTAAATT-ATTAAG-TATATTAGAAT--AGAAACATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|9 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgT-TAT--GAAAAC----A-A---A--A---------------TAT-----AAA-T-ACG--------T----TATG-GAAACA---------------A-AAAAATATA---T------A-CGTTATGCACAC---------GACCCTT----------------------------------------------TTTTGA-A---CACGGCC------------CTCATGAAAT-G--CCTACGTCATTGA---A---T--GTT---G-TGTTCTGCTCAGTCAGAC---TATCGCC-A--CAGTATTTGAAGC-TCCG------TG-TT-GAA-----------------AGA----GAAGAT-CATTAGAGGTTCTTTAGGGGGATATCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAACTACAATTT------------------TATGGATGAAAAATACAGCGCACGGAATT--AAAAAAAACACCTTTACTTGTGTTGATGC---AATGCAATA----TA--CTT-TTAAGAGATA-GTCTCGAAAGGA---CATGTCTATCACCATAGGCATAGCCGCCGGAGCGTTAGAGTTAA-TGATGTGGCCCTATATTCCGAATTTTTGACATTATTT--AACCACACTTCCTATGGCAAAA--GAGATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTg
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AATGACATAATTACAGAGATCCACAGATCTAAGATACCGATCTTCTATACTAATTTAATATATATGGCTGAAATTTCGAGTGGTATCTTTTATAACTTTTTGAACCACTGTCTGAAAATAATAATTTTGGTAACATTGGAATATTAAGCTGACATTTGAATTAATTGACATCTTTTAAAATTGTTACCAGTCATGATTTATTTTCGTTCTGAGTTAAAAAATATTACAGATTGGAAAAAATGTATGCATTTTTAAAAAGAAGTATTTTTTGAAACAAAAAAGGTACCATACTAGTTTCAACAAAGTCTTTTACCTTTTTAACTATCATATCATTTAAATATAAATTTTGTACAGAAAGATAAAGAAGTGAATAATCCATTGGTAGTGAACATTTTTGATTTTTTTTTTTTAAAAATTATGTTGCTTAAAATTTAAAAGAAAACATTATCATGAACAATTTTATGCAGTATTTTTATGCTTTTGTTGTGAAGT
Unaligned ( gi|10 ): TCCATACATAACTATAGTGACTTAATTACAGATGATGGCAGGCTAATAGCAATATAATGCACACGGCTGAAATTTCAGGTGGCATCTTTAGTATTTCTTTGAATCTTTGTCTGAATGAAATAATTTTGGTACGAAAGTTAAGCTGATAAAACTGATAACATTTCCAACTATCAATTATTTAATATTTTTCTTCTGAATTTAAATTATTACGGATTGAAAATGAAAATTGTTGAAATTTTTTACGAAATATTTTTTTTATTTTAACAAAAAATGGTAGTGTACTTGATTTAACAAATACATTTATCAACAAACAATAGAAATAAAAAAAAATATGTAGAAAGATGACAAAGTAAGTTTCCATTGGTGGCGAAAATTTCATATTTCATATAACATTTCCATAGATAATTTACATTTCCGTGGATAACTTACCTTTCCATGGACAATTTCATCAATACTGAGCTCTGTGTATTCATCCTGAAGTA
Unaligned ( gi|16 ): ATATATATGCATATAAAAGTAAAATATAGAATATCTAACGTGATATGTAAGATAAATATATTTATATATATGTGTGTTTTGTGTATATATAACAAAACACGTTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGAAAAAACACAAAATATTGATATGTATGTCGTCCGTTACAAAAAAAATATAGGAAAAACCCAGATGCAATCTGTGATCGGACCCAAGGCTGCAATACCCACAAAGAACATGCTACGTTGTTGACTTTTGTCGTGTTTCCAGACGCTTGCGCCCATTTTCGTAGCATTTGATT
Unaligned ( gi|23 ): TGAGGCGATGAACGTCACTATATTCGGAGTATATACTGTGTTCGTGATTATATATATACTTTTTAGTAAAAAAAATACACCCTCGACAAATAGATATAGTATA
Unaligned ( gi|26 ): ATTTACTGATTTAATTCTTAAATATATGGACGAGTGTATT
Unaligned ( gi|27 ): ACAGTATACTCTTACCAATACTGTTAACGAA
Alignments
lowQualScore : 11111111111111 33333333333333 111111111 111111111111 33333333333333333 222222222222222 44444444444444444444444444444444444444444444444444444444444 111111111111111 333333333333 111111111 1111111111 222222222222222222222 1111 3333333333 11 11 111 22222222222222 222222222222222222 111 11 111111 111 22222222 1 1 11 2222 111 33333333 1 1 111 222222 1 111 11 111
lowQualScore : 3 555 44 3 6666 22222222222222 11111111111111 22 333333333 000000000000 99999999999 1 88888888888888888 2 77777 222222222222222 4444 1 22 1 33333333333333333333333333333333333333333333333333333333333 2 555555555555555 2 444 555555555555 000000000 7777777777 1 4 4 66 999999999999999999999 5555 7777777777 22 77 66 888 444 33 444 7 777 1 00000000000000 2 2 2 2 777777 2 2 222222222222222222 5555 22 2 1 1 7 000 1 2 2 5 22 1 33 1 2 0 1 0 222222 5 0 000 44444444 5 7 1 1 0 6 1 1 1 0 44 9999 2 3 2 555 66666666 0 0 000 888888 3 6 444 6 88 7 555
lowQualScore : . ... .. . .... .............. .............. .. ......... ............ ........... . ................. . ..... ............... .... . .. . ........................................................... . ............... . ... ............ ......... .......... . . . .. ..................... .... .......... .. .. .. ... ... .. ... . ... . .............. . . . . ...... . . .................. .... .. . . . . ... . . . . .. . .. . . . . . ...... . . ... ........ . . . . . . . . . . .. .... . . . ... ........ . . ... ...... . . ... . .. . ...
lowQualScore : 3 888 66 3 5555 55555555555555 33333333333333 88 000000000 333333333333 00000000000 9 77777777777777777 0 00000 333333333333333 2222 9 66 7 77777777777777777777777777777777777777777777777777777777777 5 666666666666666 5 444 111111111111 000000000 3333333333 1 4 4 11 666666666666666666666 5555 9999999999 44 11 99 888 444 44 444 5 000 0 66666666666666 7 0 7 5 222222 5 5 000000000000000000 3333 00 5 0 0 0 444 5 4 7 3 11 7 99 0 0 1 4 2 999999 7 1 000 11111111 7 1 0 0 1 6 0 0 7 3 22 5555 5 2 5 555 88888888 0 0 555 888888 3 7 000 7 33 3 333
consensus : NNGTGAC-A---AA--TAAAT-ATG----GTAAACTGACTAA--T---ATATATACGTT---ANA-TCG----GTAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------C---A---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATG-CAAACA---------------A-AA---TATA---T-TATA-A-CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CC---CTC---GC--TACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
Reference ( family-1821 ) : NNGTGAC-A---AA--TAAAT-ATG----GTAAACTGACTAA--T---ATATATACGTT---ANA-TCG----GTAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------C---A---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATG-CAAACA---------------A-AA---TATA---T-TATA-A-CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CC---CTC---GC--TACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
gi|1 : GTAAC-A---AAAATACAT-ATG----TTG--TTTATGAA--T---ATAAATACGTT---TAA--------GTAA--A----A----AT-----A------TAC-----------A-ACCTCG------AC----------------AA-AT-----AC-----AT--------A----TA---------GTAAACTGTTA-A---A--A---------------TAT-----A---T-A---------------TACGTTATACA---------------ATAA---TATA---TGTAT--A-CGTTATGGACAC---------
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcaGAC-A---AA--TACAT-ATA----GTAAACTG-TTAAAAT---ATATATACGTT---ATA--CA----ATAA-----------TAT-----A------TGT-----------ATACGTTATG-GACAC--------C---AGC-AA-ATT----AT-----AT--------A----TACGT-TAT--GCAAA-CAATACA---A--A---------------CAT-----A---T-A----------cagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcAC-G--C-TACGTCGTTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TATCGCA-A--CCTTCTTTTAAAC-TCCT------TG-TT-GAA-----------------AAA----GAAGAT-TCTAAGCGGTTCTTTAGGGGTAGATCGGAGATCGGAAATATAAAAT-ATTGAT-TATG-TGGAGT--AGAACTGCAATTTAGTTATTTAATTGTGTTTTATGGATTAATAATTAAACGCACGGAATTTT--AAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----TATCTTT-TCATGAAATA-GTCTCG---ATAAGACATATTTATCACCATAGGCATATGATTCGGAGAGTTAAGGTT-GGTGATGTGGCACAAAATTCTGATTTTTTTACACTTTTTA-AACCACACATCTAAGGGCAAAATTGAGATATCCCCTCAAACATTCGAAATGACTAAGTTGTC---TAATGATCCACAATGACGGATTGCACCAGTAAATGG-GTCTCGAA-ATGCA-GTTACTACTATAAATC------TCTATATCAGATTATGCTAAAT-GACGGATTGCACCA--TAAAG----C--AAA-A-GCAAATACTAcgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatTATCAGATTATGC--TA-AATGACGGATTGCACCAT-AAA----G---C-AA-AAGCA-AATACTACTGTATATTAGTATTTCAATATCAGATTATGTCCAATCGAC-GATTGCACCAGTGAATGGGTCT--AAATATGCAAATACTAAGTctgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|11 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctcta------TAT-----------ATACGTTATG-GAAAC-----------------A-AT-----AT-----ATA------TA----TACGT-TAT--GCAAAC------A---A--A---------------TAT-----A---C-A----------TACGTTATG-CAAAGA---------------A-AA---TATA-----TAT--A-CGTTATTCACAA---------GACCCactgtatttt
gi|11 : atA-AAAAA-G--TCTACGTCATAGATTTT---T--GTC---G-TGTTC-GCT--TCCAGAC----A-CGTG-AACCCCTTTTCGGTGC-TTTT------GA-AT-GAC-----------------AAA----AAATAT-TGTAAGAGGGTCATTAGGGGAAG--------TGGGAAATGTAAACT-ATTAAG-TATATTAGAGT--AGAAATATAATTTAGTTATTAAATT-T-TTTTATGGATGAATAATcaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaaaaagtctacgtcatagatttttgtcgtgttcgcttccagacacgtgaaccccttttcggtgcttttgaatgacaaaaaatattgtaagagggtcattaggggaagtgggaaatgtaaactattaagtatattagagtagaaatataatttagttattaaatttttttatggatgaataatcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : attatatacgttatggaaacaatatatatatacgttatgcaaacaaatatacatacgttatgcaaagaaaatatatatacgttattcacaagaccccaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaAA--T---ATATATACGTT---TAA--------GTAA--A----A---TAT-----A------TAC-----------ATCCTCGA---CAAAT----------------AA-AT-----AT-----GG-------TAAACTCACAT-TG---GCACATCGGTA-ATAAATTA---------------TAT-----A---T-ACG--------T----TATG-CAAACA---------------A-AA---TATA-----TAT--A-CGTTATGCACAC---------GACCCcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaGAC-A---AA--TAAAT-ATG----GTAAACTCAC-------------AT-TGGC---ACA-TCG----GTAATAA----A---T-T-----A------TAT-----------ATACGTTATG-CAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--GCACACcaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcCA-GAAA--GAACCTACGTCATTGC---T---T--TTT---GTCGTGTT-CTCATCCAGAC----------------G-CTTTGAAGCAT--T------TG-TTTGAT-----------------GAA----GATTAT-TGTTAGAGGGTCTTAATGGGAAGG---GTGAT-----ATGTAAGCT-ATAAGTGTAT--TAGAGT--AGAAATATAATATAGTTATTTAATTGTgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|13 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcgacaaataaatatggtaaactcacattggcacatcggtaataaattatatatacgttatgcaaacaaaatatatatacgttatgcacacgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgTGACTA---CA--TATAT-ATGTTTGGTAAA------AA--T---ATATATACGTT---ATG-CAA----ACAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------CTG-C---AA-AT-----AA-----ATA------TA----TACGT-TAT--GCACACCGGTA-A---A--AATATACATACCGGGGTAT-----A---T-AAG--------T----TATG-CAAACA---------------A-TA---TATA---T------A-CGTCATGCAAAC---------AA
gi|13 : aTATATAAGTT---AT---------GCAA--A----C---AAT-----A------TAT-----------ATACGTCATG-CAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--CTACACaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|13 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggGCGCA-GAAA--GAACCAACGTCATTGA---TTTGT--GTC---G-TGTT---CTCATCCAGAC---GCGTGTA-T--CCCTTTTCAAGGC-TTTT------GA-TT-TAC-----------------GAA----GATTAT-TGTTAAAGGGTCTTAAGGGGTAGGTGGGAAAT---AAATAC----T-ATTAAG-TATgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|14 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggtatataagttatgcaaacaatatatatacgtcatgcaaacaaaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacct-GTACCACAGCTGAGT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TTTCGCA-A--CAGTCTTTGAAGC-TTCG------TG-TT-GAA-----------------AGA----GGAGAT-TATAAAAGGTTCTTTAGGGG-AGATCGGAGATGGGAAATATAAAAT-ATTAAT-AATG-TGAAGT--AAAACTACAATTTAGTTATTCAATTGTGTTTTATGGACGAATAATAAGGCGCACGCAA--TTAAAAAAAA-A-CTTTGCTTGTGTTGATAC---AATGCAATATATTT---TTT-TTAAGAAACAGGGATCGAAAAGAAGACATATTTATCACCATAGGAATATGAGTCGGGGTGGTAGG---CGATGATGTGGCTCAATATTCCGCATTTTTAACA--TTTTT-AACCAGACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTTGAAATGACTAAGCTATAAGTTGATG
gi|15 : G-CAAAC-----------------A-AT-----AT-----AT-------AA----TATGT-TAT--GAAAAC----A-A---A--A---------------TAT-----A---T-A----------TACGTTATG-AAAACA---------------A-AA---TATA---A--ATA---CGGTATGCACAT---------GTCTCTTTT--------T-CAA-A-CGA--CC---CTG---AC--TACC-A--------------AAAGCT--------------------AC-G--CCTACGTCATTGA---T---T--GTT-------------TTAGTCAGAC---TTTCGCA-A--CCGTCCTTGAAGC-TCCT------TG-TT-GAA-----------------AGA----GAAGAA-TCTAAGAGGTTCTTTACGGGT-GATCGTAGATGTGAAATATAACAT-ATTAAT-TATG-TGGTGT--AGAACTACAATTTACTTATTTAATTGTGTTTTATGGATGAATAATAAAGCGCACGGA--TTTAAAAAAAA-GCCTTTATTTTTGTTGATGC---AATGCAATA----T---c
gi|17 : CA-GAAAGAG--CATACATCAT-GAATTT---T--GGC---G-CGTTCT---CATCCAGAC---GCGTGTA-T--CCCTTTTCGAAGC-TTTT------GG-TT-GAC-----------------GAA----GATTAT-TGTTAGAGGGTATTAAAGGGAAGGTGGGAAATGTTAACTATTAAAT-AT--AT-TAC-----AGT--AGAAATATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAAAG
gi|18 : cccaaatggaaccagtttcgcaacaattccgagaaccagacggtgtaacagtaaacattgcccgattactgggaaacccaaaatgcaatcgcttatctgaagccaggatacaatatcttcgTGAC-A---AA--TAAAT-ATG----GTAAATTGACTAA--T---AAATATATATTAGCACA-TCA----GTTA--G----A----AT-----A------TAT-----------ATACGTTATG-C-AAC--------C---A---AA-CT-----AT-----AT-------TG-----ACGT-TAT--GCAAAC----------A--A---------------TAT-----A---T----------------------------------------------A---TATA---T-TAT--A-CATTAGACACTC---------GACACATTT--------TGCAC-A-CGG--TC---ATT---GC--TACCTA--TTTTGATGTACTACAG
gi|19 : gttatatttacatcgtaatgcaatcgtatgaagccccaaacgtgattatattcagtgacataaatgaattatatgtgtaaaagtatacactctACC-AA-TTTTG------CACA-CTG---------CCCTCATGAAAT-A--CCTACGTCATTGA---A---T--GTT---G-CGTTATTCTCAGTCAGAA---TATCGC------CGTCTTTGAAGC-TCCT------TG-TT-GAA-----------------AGA----GAAGAT-TCTAAGAAGTTCCTTAGGGGGAGATCGGAGATGGTAAAT-TAAAATTATTATT-TATG-TGGAGT--AGAACTACAATTTGGTTGTTTAATTGTGTTTTATGGATGAATAA
gi|2 : acacgGTGAC-A---AA--TAAAT-GTG----GTAAACTGACTAA--T---ATATATATGGC---ACA-CCG----GTAA--A----A---TAT-----A------T-T-----------ATACGTTATG-CACAC--------CGGTA---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCACACCGGTA-A---A--A---------------TAT-----A---T-A----------T-----ATG-CAAACA---------------A-CA---TATA---T-TATA-AACGTTATGCACAC---------GATCCTTTT--------TGCACTA-AGG--CC---CTC---AC--TATCGA--TTTTGATGTACCACAGCTGATT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CATTCTGCCAAGTCTGAC---TATCGCA-A--CCGTCTTTGAAGC-TCCA------TG-TT-GAA-----------------AGG----GAAGAT-TCTAAGAGTTTTTTTAGGGAGAGGTCGGACATGGGAAATATAAAAT-ATTAAT-CATG-TGGAGT--AGAACTACAATTTAGTCATTCAACTGTGTTTTATCGAGGAATAATAAAATGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATATGTTTCAAAACGAAGACATATTTATTACCATAGGCATCAGAGTCGGAGCAGTAGGGTTGGGTAATGTGGCCCAATATTCCAATTTTTTTACATTCTTTTAAACCACACTTCTTAGTGCAAAATTGAAATATCTCCTCAAACATTGGAAATGACTAAGCTGTCAGTTGATGA---ACAATGGCGAATTGCACCCG-AAAT-G-----C-AG-ATACATTGTACTTCTATATATT------TCTATATCATAATATGTCCAAT-GGCGGTTTGCACCAGCAAAAGGGTCTCGAAATA-A-AAACACTAAGTgacggagcgttaggat
gi|20 : ccCT------TGATC-TAC-----------------GAA----GATTAT-TGTTAGAGGGTCTTTAGGGG--------AGATGGAAAATATAAACT-ATTAAC-TATA-T-AAGTGAAGGAAAACAATTTAGTTATTAAATTGTtc
gi|21 : ttgagaaaatctagaagcaatccgtgatcagaccaaaggctgcaatacctgaaaagaacaccgcagaaagagatacgtcatagttttttgccgtgtttaatccagacaAA--T---ATTTATATGTC---GT--TCG----TTAC--A----A----AT-----A------TAT-----------ATACGTTATG-CACAC--------t
gi|21 : aaatgtttttttagatatataaaggaaaatacaa---------------A-AA---TATA---T--ATA---CGTTATGCACAC---------GATCCTTTT--------TGCAC-A-CGG--CC---CTC---AT--TACC-AATTTTTAA-GTACCATAACTGA-TAT-GTACGCTC--GAAGC-G--CATACGTCATTGA---T---T--GTT---G-CCTTCTGCTCAATCAAAC---Tgatcctttttgcacacggccctcattaccaatttttaagtaccataactgatatgtacgctcgaagcgcatacgtcattgattgttgccttctgctcaatcaaact
gi|22 : aaatgtttttttagatatataaaggaaaatacaaaatatttatatgtcgttcgttacCGGAGCGTTAGGATTGG-TGATGTAGCCCAATACTCCGAATTTTTAACATTTT----AACCACGCTTCTTGGAGCGAAGTTGACATATCCCCTTGAACATCCGAGATGACTAAGCTATCAGTTGAT
gi|24 : gaA----T---TTTGTTAAGAAATA-GTCTCGAAAAGAAGACATATTTGTCACCATCGGCATAAGAGTCGGAGCGAAAGAGTT-GGTGATGTAGCCTAATATTCC
gi|25 : aA--A----A----AT-----A------CAT-----------ATACGTTATG-TAAA---------C---A---AA-AT-----AT-----A--------TA----TACGT-TAT--GTAAACt
gi|3 : aacGAC-A---AC--AAAAT-ATG----GTAAACTGACTA---T---ATATATAGGC----AAA-TCG----GTAA--ATAT-A---TAT-----A------TAT-----------ATATGTTATG-CAAAC------------A---AA-AT-----AT-----AT-------------------------------------------A---------------TAT-----A---C-A----------T----TATG-CAAACA---------------A-AA---TATG---T--ATA---CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--C-------------------A--TTTTGATGTACCACAGCTGA-T-TTGTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--TTG---G-CGTTCAACTCAGTCAGAC---TATCGCA-G--CCGTCTTTGAAGC-TCCT------TG-TT-GAAAGTAAAGAATTTTAGAAGAAAAGAGATGAT-TCTAAGAGGTTCTTTAGTGGGAGATCGGAGATGGGAAATATAAAAT-GTTAACGTATG-TGGAGA--AGAACTACAATTTGATTATTCAATTATGTTA-ATAGATACATAATAAA------------------AAAA-GCCTT--CTTCTGTTGATGC---AAAGCAATAAT--T---TTT-TTAAGAA-TACGTCTCGAAAAGAAAACATGCTGATCACCAAAGGCATGGGGGTCGGAGCGGTAGGGTTGGGTGAGTTGGTCCAATATTCCGATTTGTTTACATTCTTTT-AACCACACTTCATAGGGCAAAATTGAAATATCCCCTGTAACATTCGAAATGGCTAACATGTCAGTTGATG---CACAATGACAG--T--------AAAT-GTGTCTC-AATATACA-GGTACTACTATATATT------TCTATATCAGATTATGaa
gi|4 : ctatgagaggtcaaacgtgactatattcagtgacataaatatatatgtttaagtaaaaaatatacattttcGTGAC-ATAAAA--AAAGT-GTT----GTAAAC-------------ATATATACGTT---TAA--------GTAA--A----A---TAT-----A--------T-----------ACACCCTCGA-CAAAT----------------AA-AT-----ATGGNNNNN-------NN----NNNNN-NNN--NNNNNNNNNNN-N---N--N---------------NNN-----N---N-N----------N----NNNN-CAAACA---------------A-AA---TATA-----TGT--A-CGTTATGCAGAC---------
gi|4 : tatgaggtgccaaacgtgacaatattcaGAC-A---AA--TAAAT-ATG----GNNNNNNNNNNNN--N---NNNNNNNNNNN---NNN-NNN----NNNN--N----N---NNN-----N-------------------------------CAAAC------------A---AA-AT-----AT-----AT--------G----TACGT-TAT--GCAGACCGGTA-cggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|4 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctc-G--CATACGTCTTTGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC----AT-------------TTTGA-----------------TT-GAC-----------------GAA----GATTAT-TGTTAGAGGATTTTCAGAGGAAGGTGGGAAATGTAAACTATAAG-T-A--AAT-TA-----AAAT--AGAAATATAATTTAATTATCAAATTGT--TTTATGGACGAATAATAAAGCGCACAGAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcgacaaataaatatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaacaaaatatatgtacgttatgcagaccggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagaA--T---ACATATACGTT---TAA--------GTAA--A----A---TAT-----A------TACTACCTCGAAAAATACATTATGGTAAAC--------G---G---ACTAT-----AT-----AT-------TA----TAT-----T--GCACATTGGTA-A---A--AATTCATAAACACT--TAT-----A---TTG----------T----TATG-CAAACA---------------A-TA---TATAATTT-TATATA-CGTTATGCAAAC---------AAacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttGAA-A---AA--TACATTATG----GTAAACGGACT-A--T---ATAT-TATATTGC-ACA-TTG----GTAA--A----AATTCAT-----AAACACTTAT-----------AT-TGTTATG-CAAAC-----------------A-AT-----AT-----ATAATTTTATA----TACGT-TAT--GCAAAC----A-A---A--A---------------TAT-----T---T-A----------T----TATA-TATACGTTATGCATATCGGTTA-AA---TATA---G-TAT--A-CGTTATGCAAAC---------AAaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcTG----GTAAA------AA--TTC-ATAAACAC-TT---ATA-TTGTTATGCAA--ACAATA---TAT-----AATTT--TAT-----------ATACGTTATG-CAAAC------------A---AA-AT-----ATTTATTATA------TA----TACGT-TAT--GCATATCGGTT-A---A--A---------------TAT-----AGTAT-ACG--------T----TATG-CAAACA---------------A-AA---TA-----T-TATATA-CATTATACAAAC---------AAAATATATATACAATATGCAC-A-CGA--CC---CCCAGAGCGGTACC-A--GTTTaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacatTATATACGTT---ATG-CAA----ACAA--A----A---TATTTATTA------TAT-----------ATACGTTATG-CATAT--------C---GGTTAA-AT-----AT-----AG-------TA----TACGT-TAT--GCAAAC----A-A---A--A---------------TATTATATA---C-A----------T----TATA-CAAACA---------------A-AA---TATA---TATACA-A----TATGCACAC---------GACCCC-------------CAG-AGCGGTACCAGTTTC---GC--AACA-A--TTCTGA-GAACCAcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataatttCA-GAAAGAG--CCCACGTCATCGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC---GCTTGAACA--CCAT-TTCGAAGC-TTTT------GA-TT-GAC-----------------GAA----GATTAT-TGTTCGAGAGTC-TTAAGGGGAG---GGA----GGAAATGT-TAAC-CTTAAG-TGTATTAGAGT--AGAAATATAATATAGTTATTAAGTTGgacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|6 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataattttatatacgttatgcaaacaaaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgC-A---AA--TAAAT-ATG----GTTAAATGACT-A--T---ATTTATATATT---ATGTTCG----GTAA--AT---A---TAT-----A------TAT-----------ATA
gi|6 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgCTCA-GAAAGAG--CCTACGTTATTGA---T---T--TTTGGCG-CGTT---CTCATCCAGACGCGTAT---A-T--CCCTTTTCGAAAC-TTTTGACATATA-TT-AAG-----------------AAA----TATAATATGTAAGAattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttctcagaaagagcctacgttattgatttttggcgcgttctcatccagacgcgtatatcccttttcgaaacttttgacatatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgcaaataaatatggttaaatgactatatttatatattatgttcggtaaatatatatatataattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttAA--T---ATATATACGTT---TAA--------GTAA--A----A----A------A------TAT-----------ACACCTTCAA-CAAATAAATATGGT---A---AA-ATGACTAAT-----AT-------AA----TATATATATTGGCACATCGGTA-A---A--A---------------TAT-----A---T-AAATATATACGT----TATG-CAAAAA---------------A-AA---TATA-----TAT--A-TGTTATGCAAACCTAATATATAATACTTTA--------TGCAC-A-TGA--CC---Cattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaAC-A---AA--TAAAT-ATG----GTAAAATGACTAA--TATAATATATATATTGGCACA-TCG----GTAA--A----A---TATATAA-A------TAT-----------ATACGTTATG-CAAA---------A---A---AA-AT-----AT-----A--------TA----TATGT-TAT--GCAAACC--TA-A---T--A---------------TATA----A---T-ACT--------T----TATG-CAcaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaAAA-GCAATCACTTGT-CTGAGGCCAGGATGCAATA----C---TTT-CGCAGAAAGA-GCCTcatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctCA-GAAAGAG--CCTACATCATTGA---T---TTTGTC---G-TGTTAT---CATCCAGAC---GAGTGTA-C--CCCATTTCGAAGC-TTTT------GA-TT-GAT-----------------GAA----GATAAT-TGTTAGAGGGTCGTAAAGGGAAGG-------TGGGAAATGTAAATT-ATTAAG-TATATTAGAAT--AGAAACATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|9 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgT-TAT--GAAAAC----A-A---A--A---------------TAT-----AAA-T-ACG--------T----TATG-GAAACA---------------A-AAAAATATA---T------A-CGTTATGCACAC---------GACCCTT----------------------------------------------TTTTGA-A---CACGGCC------------CTCATGAAAT-G--CCTACGTCATTGA---A---T--GTT---G-TGTTCTGCTCAGTCAGAC---TATCGCC-A--CAGTATTTGAAGC-TCCG------TG-TT-GAA-----------------AGA----GAAGAT-CATTAGAGGTTCTTTAGGGGGATATCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAACTACAATTT------------------TATGGATGAAAAATACAGCGCACGGAATT--AAAAAAAACACCTTTACTTGTGTTGATGC---AATGCAATA----TA--CTT-TTAAGAGATA-GTCTCGAAAGGA---CATGTCTATCACCATAGGCATAGCCGCCGGAGCGTTAGAGTTAA-TGATGTGGCCCTATATTCCGAATTTTTGACATTATTT--AACCACACTTCCTATGGCAAAA--GAGATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTg
blockSeqs : T TAA . T TTTG ATGACTAATATA ATATTGTTAT TA CAATAT AAACACT TACCTCGAAAA G TAAATATGGTA T GACTA ATAATTTTAT AACT A TG A CGGTAAAAATATACATACCGGGGTATATAAGT . TTATGCATATCGGTT . AAA ATTTTATATA CTAATATAT ATATACAATA G T G TA CCCAGAGCGGTACCA ATGT GATTTGTA AT GA AA TTT TTG TT GGC T CTG T GCTTGAACA C T A T GACATA A T AAGTAAAGAATTTTAGAA AAGA AT A A G A GTG G C T G AT A GA A A G ATTTTA C CAG TATTT G G T G C A A A T TA CT C A G AT TGTGTCT . T TTG AGTATT C G GTG G CG T TGC
blockSeqs : . . . . . CTGTTAAAAT AGCACATCA . TATAT TTATTA . . CCGGTA . T TTATTATAT . . . A TGGTAAAAATTCATAAACACTTATATTGT . . . . TTATAAA . TT G . . . AGTTTCGCAACAA ATGT GATATGTA AT GA AA ATT . . . T ATT T ACGTGAAC G C . T . . . C . TT . T G A ATC A C . G AT A . A T G ATTA . . ATT . T A G G G T T T T A C A G CG TG . . AA . . . GCA G . T A
blockSeqs : . . . . . TTGACTAAT GGCACATCG . AATTC AATTT . . TCGGTT . . GGNNNNNN . . . C CGGTAAAATATATAAATATATACGT . . . . TTATATA . TT G . . . CTCATTACCAAT ATGT GATTTGTA A GA . . . . . T CTG T GCGTGTAT C T . T . . . T . TT . T G T ATC G A . . AT G . C C G TTTA . . TA . C A T G G A A T T C . . . . G . . GG .
blockSeqs : . . . . . CTGACTAAT GCACATTG . TAT ATAAA . . CCAGC . . ATAT . . . C CGGTAATAAATTATATATACGT . . . . TATACAA . TT G . . . ATTGCTACCTA AGT G A GA . . . . . . CTG G TTTCGCAA G C . C . . . C . AG . A T T GTG G A . . G G . C T G ATTA . . T . . G A G G T T T .
blockSeqs : . . . . . NNNNNNNNN ATGTTCG . AT A . . CCTGC . . ATAT . . . C CGGTTAAATATAGTATACGT . . . . TTATA . TT G . . . CTCACTATCGA AGA . A A . . . . . . CAA G TTTCGCAA G C . T . . . A . AG . A T A ATC A A . . G G . A A G . . . T . . G G A . A G . .
blockSeqs : . . . . . CTGACTAT ACATCG . AT A . . CCA . . GGT . . . C AAAATATTATATACAT . . . . GTATA . TA G . . . A AA . A C . . . . . . CTG T GCGTGTAT C T . C . . . A . TT . T G G GTC G A . . G G . C T G . . T . . T . .
blockSeqs : . . . . . CGGACTAT ATGCAA . AT A . . CGG . . ATA . . . A CTAATATATAATACTT . . . . TATA . . . . . . . . A C . . . . . . CG G TATCGCAA G C . C . . . C . AG . A T G ATC C A . . G G . C C G C
blockSeqs : . . . . . ATGACTAT ACACCG . CA A . . CA . . ATT . . . A AAAATATATATACGT . . . . TATA . . . . . . A T . . . . . . TT G TATCGCAG G C . C . . . A . AG . A T G GTG G C . . A A . A A .
blockSeqs : . . . . . CTCAC AAATCG . AT A . . CA . . ATT . . . C CGGTAAAATATATAT . . . . AATA . . C . . . . . . CT A GCGTATAT G C . T . . . A . TT . T G A ATC G A . . G A . C C .
blockSeqs : . . . . . AATTC NNNNNN . AT A . . CA . . ATT . . . A NNNNNNNNNNNNNNN . . . . TATA . . C . . . . . . TT G GAGTGTAC A T . T . . . C . TG . A T G G A A . . G G . A A .
blockSeqs : . . . . . AAT ATGCAA . NN A . . CA . . AGT . . . N AAAATATAAATACGT . . . . TATA . . C . . . . . . TT T TATCGCCA C T . T . . . C . TT . T A A G G T . . . . . A A
blockSeqs : . C ATACA . AT A . . CA . . ATA . . . G AAATATACATACGT . . . . TGTA . . T . . . . . . AT T TATCGC C A . C . . . C . TT . T G G . . A . . . . . A A
blockSeqs : GTTCG . AT A . . CA . . AT . . . C AAAATATTTAT . . . . TATA . . . . . . . . . . T AT G . . . . . . G . TA . A G . . . . . . . . . C .
blockSeqs : TAA . AT A . . AA . . AT . . . A ATATACAT . . . . TA . . . . . . . . . T . . . . . . . . T . TA . T T . . . . . .
blockSeqs : TAA . T A . . C . . AT . . . T AATATAT . . . . TA . . . . . . . . G . . . A . AG . T
blockSeqs : TAA . A N . . T . . AT . . . A
blockSeqs : TAA . A A . . C . . AT . . . C
blockSeqs : AT . A A . . T . . AT . . . A
blockSeqs : . A A . . C . . AT . . . A
blockSeqs : . . . . .
blockSeqCons : ** CTGACTAAT***** ATATCG******** AT******* CA*************** AT************* TATA******** CTCGCTACCA*********** AGT* ATTA** T******* T*
originalCons : NNGTGAC-A---AA--TAAAT-ATG----GTAAACTGACTAA--T---ATATATACGTT---ANA-TCG----GTAA--A----A---TAT-----A------TAT-----------ATACGTTATG-CAAAC--------C---A---AA-AT-----AT-----AT-------TA----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATG-CAAACA---------------A-AA---TATA---T-TATA-A-CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CC---CTC---GC--TACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
finalCons : NNGTGAC-A---AA--TAAAT-ATG----GTAAACTGACTAAT-----ATATATACGTTATATCG--------GTAA--AAT-------AT-----A------TAT-----------ATACGTTATG-CAAACA---------------AA-AT-----ATAT-------------A----TACGT-TAT--GCANACCGGTA-A---A--A---------------TAT-----A---T-A----------T----TATG-CAAACA---------------A-AA---TATATATA--------CGTTATGCACAC---------GACCCTTTT--------TGCAC-A-CGG--CCCTCGCTACCA-----------TTTTGAGT-ACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAATTA--AAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATAT-------TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AATGACATAATTACAGAGATCCACAGATCTAAGATACCGATCTTCTATACTAATTTAATATATATGGCTGAAATTTCGAGTGGTATCTTTTATAACTTTTTGAACCACTGTCTGAAAATAATAATTTTGGTAACATTGGAATATTAAGCTGACATTTGAATTAATTGACATCTTTTAAAATTGTTACCAGTCATGATTTATTTTCGTTCTGAGTTAAAAAATATTACAGATTGGAAAAAATGTATGCATTTTTAAAAAGAAGTATTTTTTGAAACAAAAAAGGTACCATACTAGTTTCAACAAAGTCTTTTACCTTTTTAACTATCATATCATTTAAATATAAATTTTGTACAGAAAGATAAAGAAGTGAATAATCCATTGGTAGTGAACATTTTTGATTTTTTTTTTTTAAAAATTATGTTGCTTAAAATTTAAAAGAAAACATTATCATGAACAATTTTATGCAGTATTTTTATGCTTTTGTTGTGAAGT
Unaligned ( gi|10 ): TCCATACATAACTATAGTGACTTAATTACAGATGATGGCAGGCTAATAGCAATATAATGCACACGGCTGAAATTTCAGGTGGCATCTTTAGTATTTCTTTGAATCTTTGTCTGAATGAAATAATTTTGGTACGAAAGTTAAGCTGATAAAACTGATAACATTTCCAACTATCAATTATTTAATATTTTTCTTCTGAATTTAAATTATTACGGATTGAAAATGAAAATTGTTGAAATTTTTTACGAAATATTTTTTTTATTTTAACAAAAAATGGTAGTGTACTTGATTTAACAAATACATTTATCAACAAACAATAGAAATAAAAAAAAATATGTAGAAAGATGACAAAGTAAGTTTCCATTGGTGGCGAAAATTTCATATTTCATATAACATTTCCATAGATAATTTACATTTCCGTGGATAACTTACCTTTCCATGGACAATTTCATCAATACTGAGCTCTGTGTATTCATCCTGAAGTA
Unaligned ( gi|16 ): ATATATATGCATATAAAAGTAAAATATAGAATATCTAACGTGATATGTAAGATAAATATATTTATATATATGTGTGTTTTGTGTATATATAACAAAACACGTTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGAAAAAACACAAAATATTGATATGTATGTCGTCCGTTACAAAAAAAATATAGGAAAAACCCAGATGCAATCTGTGATCGGACCCAAGGCTGCAATACCCACAAAGAACATGCTACGTTGTTGACTTTTGTCGTGTTTCCAGACGCTTGCGCCCATTTTCGTAGCATTTGATT
Unaligned ( gi|23 ): TGAGGCGATGAACGTCACTATATTCGGAGTATATACTGTGTTCGTGATTATATATATACTTTTTAGTAAAAAAAATACACCCTCGACAAATAGATATAGTATA
Unaligned ( gi|26 ): ATTTACTGATTTAATTCTTAAATATATGGACGAGTGTATT
Unaligned ( gi|27 ): ACAGTATACTCTTACCAATACTGTTAACGAA
Alignments
lowQualScore : 33333333333333 222222222222222222222222222 11111111 55555555555555555555555555555555555555555555555555555555555 111111111 22222222222222222222 1111 3333333333 11 11 111 22222222222222 222222222222222222 111 11 111 22222222 1 1 11 2222 111 33333333 1 1 111 222222 1 111 11 111
lowQualScore : 3 666 44 6 6666 88888888 333 0 22222222222222 22 7777 555 8888 55555 555555 4444 222222222222222222222222222 2 555 4 2 33333333 22 666666 666666 4 2 4444 2 99999999999 1 77777777777777777777777777777777777777777777777777777777777 33 33 5555 333 2 666666 2 33 000000000 00 2 5 5 77777777777777777777 5555 7777777777 22 77 66 888 444 33 444 7 777 1 00000000000000 2 2 2 2 777777 2 2 222222222222222222 5555 22 2 1 1 7 000 1 2 0 2 5 22 1 33 1 2 55 0 77 5 0 000 44444444 5 7 1 1 0 6 1 1 1 0 44 9999 2 3 2 555 66666666 0 0 000 888888 3 6 444 6 88 7 555
lowQualScore : . ... .. . .... ........ ... . .............. .. .... ... .... ..... ...... .... ........................... . ... . . ........ .. ...... ...... . . .... . ........... . ........................................................... .. .. .... ... . ...... . .. ......... .. . . . .................... .... .......... .. .. .. ... ... .. ... . ... . .............. . . . . ...... . . .................. .... .. . . . . ... . . . . . .. . .. . . .. . .. . . ... ........ . . . . . . . . . . .. .... . . . ... ........ . . ... ...... . . ... . .. . ...
lowQualScore : 6 444 66 2 5555 44444444 999 4 11111111111111 88 0000 555 2222 00000 555555 0000 999999999999999999999999999 0 555 0 0 66666666 99 111111 111111 2 1 5555 1 55555555555 7 77777777777777777777777777777777777777777777777777777777777 22 22 0000 999 2 444444 2 11 777777777 44 5 0 0 99999999999999999999 5555 9999999999 44 11 99 888 444 44 444 5 000 0 66666666666666 7 0 7 5 222222 5 5 000000000000000000 3333 00 5 0 0 0 444 5 5 1 7 3 11 7 99 0 0 11 2 99 7 1 000 11111111 7 1 0 0 1 6 0 0 7 3 22 5555 5 2 5 555 88888888 0 0 555 888888 3 7 000 7 33 3 333
consensus : NNGTGAC-A---AA--TAAAT-ATG----GTAAACT-GACTAATATA---TATACGT---T---ATA-T-CGGTA--A----A---A---TAT-----A------TA----T---------------A-----------TACGT-T---ATG-CAAA-C----A---AAAT--A------T------A-T-A----T-ACGT-----------TATGCAAAC-CGGTAA---A--A---------------TAT-----A--T-A----------T----TATG--CA--AAC----AA---AATA-TA------T-ATA--CGTTATGCACAC---------GACCCTTTTTGCAC-A-CGG--CC---CTCGCTACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAA--TTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
Reference ( family-1821 ) : NNGTGAC-A---AA--TAAAT-ATG----GTAAACT-GACTAATATA---TATACGT---T---ATA-T-CGGTA--A----A---A---TAT-----A------TA----T---------------A-----------TACGT-T---ATG-CAAA-C----A---AAAT--A------T------A-T-A----T-ACGT-----------TATGCANAC-CGGTAA---A--A---------------TAT-----A--T-A----------T----TATG--CA--AAC----AA---AATA-TA------T-ATA--CGTTATGCACAC---------GACCCTTTTTGCAC-A-CGG--CC---CTCGCTACC-A--TTTTGA-GTACCACAGCTGA-T-T-GTACGCTCA-GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCANCCAGAC---TATCGCA-A--CCGTCTTCGAAGC-TCCT------TG-TT-GAC-----------------GAA----GANNAT-TGTNAGAGGNTCTTTAGGGGGAGGTCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAANTACAATTTAGTTATTNAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAA--TTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATA-GTCTCGAAAAGAAGACATATTTATCACCATAGGCATANGAGTCGGAGCGNTAGGGTTGGGTGATGTGGCCCAATATTCCGANTTTTTNACATTTTTTT-AACCACACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTTGATGA--CACAATGACGGATTGCACCAG-AAAT-G-GTCTC-AA-ATGCA-GGTACTACTATATATT------TCTATATCAGATTATGTCCAAT-GACGGATTGCACCAGCGAAAGGGTCT--AAATA-GCAAATACTAAGT
gi|1 : ACGTGACT---ATA-TTCAGTA--ACAAAA---A---TAC-----A------TA----T---------------G-----------T-TGT-TT--ATG----------------AAT--A------T------A-A-A----T-ACGTTTAAGTAAAAATATACAACCTCGACAA---AT-A---------------CAT-----A--T-A------------------G--TA--AACTGTTAA---AATA-TA------T-ATA--CGTTATACA
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaGTAAC-A---AAAATACAT-ATG----TTG--TT-TATGAATATA---AATACGT---T----TA----AGTA--A----A---A----AT-----A------TA----C---------------AACCTCGACAAATACATAT---A-G-TAAA-CTGTTA---AAAT--A------T------A-T-A----T-ACGT-----------TATACAA------TAA---T--A---------------TAT-----G--T-A----------TACGTTATGGACACCAGC----AA---ATTA-TA------T-ATA--CGTTATGCAAAC---------AAataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcaAAAT-ATA-----CAACCTCGACAAATACA---TATA-GT---A---A-A-C-TGTTA--A----A---A---TAT-----A------TA----T---------------A-------------CGT-T---ATA-CAA--T----A---ATAT--A------T------G-T-A----T-ACGT-----------TATGGACAC-CAGCAA---ATTA---------------TAT-----A--T-ACG--------T----TATG--CA--AAC----AATACAA-A-CA------T-ATA--CGCTACGtacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaAC-G--C-TACGTCGTTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TATCGCA-A--CCTTCTTTTAAAC-TCCT------TG-TT-GAA-----------------AAA----GAAGAT-TCTAAGCGGTTCTTTAGGGGTAGATCGGAGATCGGAAATATAAAAT-ATTGAT-TATG-TGGAGT--AGAACTGCAATTTAGTTATTTAATTGTGTTTTATGGATTAATAATTAAACGCACGGAA--TTTTAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----TATCTTT-TCATGAAATA-GTCTCG---ATAAGACATATTTATCACCATAGGCATATGATTCGGAGAGTTAAGGTT-GGTGATGTGGCACAAAATTCTGATTTTTTTACACTTTTTA-AACCACACATCTAAGGGCAAAATTGAGATATCCCCTCAAACATTCGAAATGACTAAGTTGTC---TAATGATCCACAATGACGGATTGCACCAGTAAATGG-GTCTCGAA-ATGCA-GTTACTACTATAAATC------TCTATATCAGATTATGCTAAAT-GACGGATTGCACCA--TAAAG----C--AAA-A-GCAAATACTAtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctctatatcagattatgctaaatgacggattgcaccataaagcaaaagcaaatactactgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|1 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatTATCAGATTATGC--TA-AATGACGGATTGCACCAT-AAA----G---C-AA-AAGCA-AATACTACTGTATATTAGTATTTCAATATCAGATTATGTCCAATCGAC-GATTGCACCAGTGAATGGGTCT--AAATATGCAAATACTAAGTctgtatattagtatttcaatatcagattatgtccaatcgacgattgcaccagtgaatgggtctaaatatgcaaatactaagtactgtatttt
gi|11 : ttgttatttgaaagaatagacacatatttggacggaatactatgaggcgccaaacgtgactatattcagtaacaaaaatacatatgttgtttatgaatataaatacgtttaagtaaaaatatacaacctcgacaaatacatatagtaaactgttaaaatatatatacgttatacaataatatatgtatacgttatggacaccagcaaattatatatacgttatgcaaacaatacaaacatatacgctacgtcgttgattgttgcgttctgctcagtcagactatcgcaaccttcttttaaactccttgttgaaaaagaagattctaagcggttctttaggggtagatcggagatcggaaatataaaatattgattatgtggagtagaactgcaatttagttatttaattgtgttttatggattaataattaaacgcacggaattttaaaaaagcctttacttgtgttgatgcaatgcaatatatcttttcatgaaatagtctcgataagacatatttatcaccataggcatatgattcggagagttaaggttggtgatgtggcacaaaattctgatttttttacactttttaaaccacacatctaagggcaaaattgagatatcccctcaaacattcgaaatgactaagttgtctaatgatccacaatgacggattgcaccagtaaatgggtctcgaaatgcagttactactataaatctcta------TA----T---------------A-----------TACGT-T---ATG-GAAA-C----A---ATAT--A------T------A-T-A----T-ACGT-----------TATGCAAAC------A---A--A---------------TAT-----A--C-ATACG------T----TATG--CA--AAG----AA---AATA-TA------T-ATA--CGTTATTCACAA---------GACCCactgtatttt
gi|11 : atA-AAAAA-G--TCTACGTCATAGATTTT---T--GTC---G-TGTTC-GCT--TCCAGAC----A-CGTG-AACCCCTTTTCGGTGC-TTTT------GA-AT-GAC-----------------AAA----AAATAT-TGTAAGAGGGTCATTAGGGGAAG--------TGGGAAATGTAAACT-ATTAAG-TATATTAGAGT--AGAAATATAATTTAGTTATTAAATT-T-TTTTATGGATGAATAATcaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaaaaaaagtctacgtcatagatttttgtcgtgttcgcttccagacacgtgaaccccttttcggtgcttttgaatgacaaaaaatattgtaagagggtcattaggggaagtgggaaatgtaaactattaagtatattagagtagaaatataatttagttattaaatttttttatggatgaataatcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : attatatacgttatggaaacaatatatatatacgttatgcaaacaaatatacatacgttatgcaaagaaaatatatatacgttattcacaagaccccaaagcggaaccaatttcgcaacatttccgagaaccagacggtgtaacagtaaagattgcccgatttctgggggaaaaccctaaatgcaatcacttatctgaggctagaatgaaataccttcgcaaaaaaaAATATA---TATACGT---T----TA----AGTA--A----A---A---TAT-----A------TA----C---------------A-----------TCCTC-G---A---CAAA-T----A---AA-T--A------T------GGT-AAACTC-ACAT-----------TG-GCACAT-CGGTAATAAATTA---------------TAT-----A--T-ACG--------T----TATG--CA--AAC----AA---AATA-TA------T-ATA--CGTTATGCACAC---------GACCCcagcaacttaataacagagaattgaaggctaatatcaattaaacatacaaggctgaaatt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaGAC-A---AA--TAAAT-ATG----GTAAACT-CAC--AT----------TGG---C---ACA-T-CGGTAATA----A---A---T-T-----A------TA----T---------------A-----------TACGT-T---ATG-CAAA-C----A---AAAT--A------T------A-T-A----T-ACGT-----------TATGCACAC-caaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|12 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcCA-GAAA--GAACCTACGTCATTGC---T---T--TTT---GTCGTGTT-CTCATCCAGAC----------------G-CTTTGAAGCAT--T------TG-TTTGAT-----------------GAA----GATTAT-TGTTAGAGGGTCTTAATGGGAAGG---GTGAT-----ATGTAAGCT-ATAAGTGTAT--TAGAGT--AGAAATATAATATAGTTATTTAATTGTgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgcagaaagaacctacgtcattgctttttgtcgtgttctcatccagacgctttgaagcatttgtttgatgaagattattgttagagggtcttaatgggaagggtgatatgtaagctataagtgtattagagtagaaatataatatagttatttaattgt
gi|13 : atgaggctccaaacgtgaccatattcagtgacataaatatatattttttttgtaaatatatatacgtttaagtaaaatatatacatcctcgacaaataaatatggtaaactcacattggcacatcggtaataaattatatatacgttatgcaaacaaaatatatatacgttatgcacacgaccccaaagcggaaccagtttcgcaccaattccgagaaccagacggtgtaccagtaaatattgcctgattattggtaaaccctgaatgcaatcgcttgtctgaggccaggatgcaatatcttcgTGACTA---CA--TATAT-ATGTTTGGTAAA-------AATATA---TATACGT---T---ATG-C-AAACA--A----A---A---TAT-----A------TA----T---------------A-----------TACGT-T---ATG-CAAA-CCTG-C---AAATAAA------T------A-T-A----T-ACGT-----------TATGCACAC-CGGTAA---A--AATATACATACCGGGGTAT-----A--T-AAG--------T----TATG--CA--AAC---------AATA-TA------T-ATA--CGTCATGCAAAC---------AA
gi|13 : aA--TAAGTTATG-----CAAAC------AATATA---TATACGT---C---AT------GCA--AAC--A---A---AAT-----A------TA----T---------------A-----------TACGT-T---ATaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|13 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggtatGCGCA-GAAA--GAACCAACGTCATTGA---TTTGT--GTC---G-TGTT---CTCATCCAGAC---GCGTGTA-T--CCCTTTTCAAGGC-TTTT------GA-TT-TAC-----------------GAA----GATTAT-TGTTAAAGGGTCTTAAGGGGTAGGTGGGAAAT---AAATAC----T-ATTAAG-TATctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacctgcgcagaaagaaccaacgtcattgatttgtgtcgtgttctcatccagacgcgtgtatcccttttcaaggcttttgatttacgaagattattgttaaagggtcttaaggggtaggtgggaaataaatactattaagtat
gi|14 : atgactacatatatatgtttggtaaaaatatatatacgttatgcaaacaaaatatatatatacgttatgcaaacctgcaaataaatatatacgttatgcacaccggtaaaaatatacataccggggtatataagttatgcaaacaatatatatacgtcatgcaaacaaaatatatatacgttatctacacgattccaaaggggaaccagtttcgcaataattccgagaaccagacggtttaacagtaaatattgcccattactggagaaaccctaaatgcagccgcttgtctgaggctaggatgcaatacct-GTACCACAGCTGAGT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CGTTCTGCTCAGTCAGAC---TTTCGCA-A--CAGTCTTTGAAGC-TTCG------TG-TT-GAA-----------------AGA----GGAGAT-TATAAAAGGTTCTTTAGGGG-AGATCGGAGATGGGAAATATAAAAT-ATTAAT-AATG-TGAAGT--AAAACTACAATTTAGTTATTCAATTGTGTTTTATGGACGAATAATAAGGCGCACGCAA--TTAAAAAAAA-A-CTTTGCTTGTGTTGATAC---AATGCAATATATTT---TTT-TTAAGAAACAGGGATCGAAAAGAAGACATATTTATCACCATAGGAATATGAGTCGGGGTGGTAGG---CGATGATGTGGCTCAATATTCCGCATTTTTAACA--TTTTT-AACCAGACTTCTTAGGGCAAAATTGAAATATCCCCTCAAACATTTGAAATGACTAAGCTATAAGTTGATG
gi|15 : G-CAAA-C----A---ATAT--A------T------A---A----T-ATGT-----------TATGAAAAC-----AA---A--A---------------TAT-----A--T-A----------TACGTTATG--AA--AAC----AA---AATA-TA------A-ATA--CGGTATGCACAT---------GTCTCTTTTT-CAA-A-CGA--CC---CTGACTACC-A--------------AAAGCT--------------------AC-G--CCTACGTCATTGA---T---T--GTT-------------TTAGTCAGAC---TTTCGCA-A--CCGTCCTTGAAGC-TCCT------TG-TT-GAA-----------------AGA----GAAGAA-TCTAAGAGGTTCTTTACGGGT-GATCGTAGATGTGAAATATAACAT-ATTAAT-TATG-TGGTGT--AGAACTACAATTTACTTATTTAATTGTGTTTTATGGATGAATAATAAAGCGCACGGAT--TTAAAAAAAA-GCCTTTATTTTTGTTGATGC---AATGCAATA----T---c
gi|17 : CA-GAAAGAG--CATACATCAT-GAATTT---T--GGC---G-CGTTCT---CATCCAGAC---GCGTGTA-T--CCCTTTTCGAAGC-TTTT------GG-TT-GAC-----------------GAA----GATTAT-TGTTAGAGGGTATTAAAGGGAAGGTGGGAAATGTTAACTATTAAAT-AT--AT-TAC-----AGT--AGAAATATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAAAG
gi|18 : cccaaatggaaccagtttcgcaacaattccgagaaccagacggtgtaacagtaaacattgcccgattactgggaaacccaaaatgcaatcgcttatctgaagccaggatacaatatcttcgTGAC-A---AA--TAAAT-ATG----GTAAATT-GACTAATAAA---TATATAT---TAGCACA-T-CAGTT--A----G---A----AT-----A------TA----T---------------A-----------TACGT-T---ATG-CAAC-C----A---AACT--A------T------A-T-T----G-ACGT-----------TATGCAAAC----------A--A---------------TAT-----A--T-A----------T---------------------------ATA-T-------T-ATA--CATTAGACACTC---------GACACATTTTGCAC-A-CGG--TC---ATTGCTACCTA--TTTTGATGTACTACAG
gi|19 : gttatatttacatcgtaatgcaatcgtatgaagccccaaacgtgattatattcagtgacataaatgaattatatgtgtaaaagtatacactctACC-AA-TTTTG------CACA-CTG---------CCCTCATGAAAT-A--CCTACGTCATTGA---A---T--GTT---G-CGTTATTCTCAGTCAGAA---TATCGC------CGTCTTTGAAGC-TCCT------TG-TT-GAA-----------------AGA----GAAGAT-TCTAAGAAGTTCCTTAGGGGGAGATCGGAGATGGTAAAT-TAAAATTATTATT-TATG-TGGAGT--AGAACTACAATTTGGTTGTTTAATTGTGTTTTATGGATGAATAA
gi|2 : acacgGTGAC-A---AA--TAAAT-GTG----GTAAACT-GACTAATATA---TATATGG---C---ACA-C-CGGTA--A----A---A---TAT-----A------T-----T---------------A-----------TACGT-T---ATG-CACA-CCGGTA---AAAT--A------T------A-TTA----T-ACGT-----------TATGCACAC-CGGTAA---A--A---------------TAT-----A--T-A----------T-----ATG--CA--AAC----AA---CATA-TA------TTATAAACGTTATGCACAC---------GATCCTTTTTGCACTA-AGG--CC---CTCACTATCGA--TTTTGATGTACCACAGCTGATT-T-GTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--GTT---G-CATTCTGCCAAGTCTGAC---TATCGCA-A--CCGTCTTTGAAGC-TCCA------TG-TT-GAA-----------------AGG----GAAGAT-TCTAAGAGTTTTTTTAGGGAGAGGTCGGACATGGGAAATATAAAAT-ATTAAT-CATG-TGGAGT--AGAACTACAATTTAGTCATTCAACTGTGTTTTATCGAGGAATAATAAAATGCACGGAATTTTAAAAAAAA-GCCTTTACTTGTGTTGATGC---AATGCAATA----T---TTT-TTAAGAAATATGTTTCAAAACGAAGACATATTTATTACCATAGGCATCAGAGTCGGAGCAGTAGGGTTGGGTAATGTGGCCCAATATTCCAATTTTTTTACATTCTTTTAAACCACACTTCTTAGTGCAAAATTGAAATATCTCCTCAAACATTGGAAATGACTAAGCTGTCAGTTGATGA---ACAATGGCGAATTGCACCCG-AAAT-G-----C-AG-ATACATTGTACTTCTATATATT------TCTATATCATAATATGTCCAAT-GGCGGTTTGCACCAGCAAAAGGGTCTCGAAATA-A-AAACACTAAGTgacggagcgttaggat
gi|20 : ccCT------TGATC-TAC-----------------GAA----GATTAT-TGTTAGAGGGTCTTTAGGGG--------AGATGGAAAATATAAACT-ATTAAC-TATA-T-AAGTGAAGGAAAACAATTTAGTTATTAAATTGTtc
gi|21 : ttgagaaaatctagaagcaatccgtgatcagaccaaaggctgcaatacctgaaaagaacaccgcagaaagagatacgtcatagttttttgccgtgtttaatccagacaAATATT---TATATGT---C---GT--T-CGTTA--C----A---A----AT-----A------TA----T---------------A-----------TACGT-T---ATG-CACA-C----G---At
gi|21 : aaatgtttttttagatatataaaggaaaatacaaA---AATA-TA------T-ATA--CGTTATGCACAC---------GATCCTTTTTGCAC-A-CGG--CC---CTCATTACC-AATTTTTAA-GTACCATAACTGA-TAT-GTACGCTC--GAAGC-G--CATACGTCATTGA---T---T--GTT---G-CCTTCTGCTCAATCAAAC---Ttcctttttgcacacggccctcattaccaatttttaagtaccataactgatatgtacgctcgaagcgcatacgtcattgattgttgccttctgctcaatcaaact
gi|22 : aaatgtttttttagatatataaaggaaaatacaaaatatttatatgtcgttcgttacCGGAGCGTTAGGATTGG-TGATGTAGCCCAATACTCCGAATTTTTAACATTTT----AACCACGCTTCTTGGAGCGAAGTTGACATATCCCCTTGAACATCCGAGATGACTAAGCTATCAGTTGAT
gi|24 : gaA----T---TTTGTTAAGAAATA-GTCTCGAAAAGAAGACATATTTGTCACCATCGGCATAAGAGTCGGAGCGAAAGAGTT-GGTGATGTAGCCTAATATTCC
gi|25 : a--A----A---A----AT-----A------CA----T---------------A-----------TACGT-T---ATG-TAAA-C----A---AAAT--A------T------A-T-A----T-ACGT-----------TATGTAAAC-t
gi|3 : aacGAC-A---AC--AAAAT-ATG----GTAAACT-GACTA-TATA---TATAGGC---A---A-A-T-CGGTA--A----ATATA---TAT-----A------TA----T---------------A-----------TATGT-T---ATG-CAAA-C----A---AAAT--A------T------A-T-A----T-A------------------------------------------------------T-----A--C-A----------T----TATG--CA--AAC----AA---AATA-TG------T-ATA--CGTTATGCACAC---------GACCCTTTTTGCAC-A-CGG--C--------------A--TTTTGATGTACCACAGCTGA-T-TTGTACGCTC--GAAAC-G--CCTACGTCATTGA---T---T--TTG---G-CGTTCAACTCAGTCAGAC---TATCGCA-G--CCGTCTTTGAAGC-TCCT------TG-TT-GAAAGTAAAGAATTTTAGAAGAAAAGAGATGAT-TCTAAGAGGTTCTTTAGTGGGAGATCGGAGATGGGAAATATAAAAT-GTTAACGTATG-TGGAGA--AGAACTACAATTTGATTATTCAATTATGTTA-ATAGATACATAATAAA------------------AAAA-GCCTT--CTTCTGTTGATGC---AAAGCAATAAT--T---TTT-TTAAGAA-TACGTCTCGAAAAGAAAACATGCTGATCACCAAAGGCATGGGGGTCGGAGCGGTAGGGTTGGGTGAGTTGGTCCAATATTCCGATTTGTTTACATTCTTTT-AACCACACTTCATAGGGCAAAATTGAAATATCCCCTGTAACATTCGAAATGGCTAACATGTCAGTTGATG---CACAATGACAG--T--------AAAT-GTGTCTC-AATATACA-GGTACTACTATATATT------TCTATATCAGATTATGaa
gi|4 : ctatgagaggtcaaacgtgactatattcagtgacataaatatatatgtttaagtaaaaaatatacattttcGTGAC-ATAAAA--AAAGT-GTT----GTAAAC---------ATA---TATACGT---T----TA----AGTA--A----A---A---TAT-----A------------T---------------A-----------CACCC-T---CGA-CAAA-T--------AAAT--A------TGGNNNNN-N-N----N-NNNN-----------NNNNNNNNN-NNNNNN---N--N---------------NNN-----N--N-N----------N----NNNN--CA--AAC----AA---AATA-TA------T-GTA--CGTTATGCAGAC---------
gi|4 : tatgaggtgccaaacgtgacaatattcaGAC-A---AA--TAAAT-ATG----GNNNNNN-NNNNNNNNNN---NNNNNNN---N---NNN-N-NNNNN--N----N---N---NNN-----N------------------------------------------------------CAAA-C----A---AAAT--A------T------A-T-G----T-ACGT-----------TATGCAGAC-CGGTAcggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|4 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctc-G--CATACGTCTTTGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC----AT-------------TTTGA-----------------TT-GAC-----------------GAA----GATTAT-TGTTAGAGGATTTTCAGAGGAAGGTGGGAAATGTAAACTAT-AAGT-A--AAT-TA-----AAAT--AGAAATATAATTTAATTATCAAAT--TGTTTTATGGACGAATAATAAAGCGCACAGAA--nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagagcatacgtctttgatttttgtcgtgttctcatccagacattttgattgacgaagattattgttagaggattttcagaggaaggtgggaaatgtaaactataagtaaattaaaatagaaatataatttaattatcaaattgttttatggacgaataataaagcgcacagaaacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggtgccaaacgtgacaatattcagtgacataaaaaaagtgttgtaaacatatatacgtttaagtaaaatatatacaccctcgacaaataaatatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaaacaaaatatatgtacgttatgcagaccggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcggaaccagtttcgcaacaattccgagaaccaggcggtgtaatagtaaatagtgtccgattacttagaaatctctaaatgcaattgcttgtctgaggccagaatgcaatacctttacaaaaagaATACA---TATACGT---T----TA----AGTA--A----A---A---TAT-----A------TA----CTACCTCGAAAA----A-----------TACAT-T---ATGGTAAA-C----G---GACT--A------T------A-T-A----TTATAT-----------T--GCACAT-TGGTAA---A--AATTCATAAACACT--TAT-----A--TTG----------T----TATG--CA--AAC----AA---TATA-TAATTTTAT-ATA--CGTTATGCAAAC---------AAacagtgacttaataatagagactagaagcatcgtatcaattcagcaggcacgg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttGAA-A---AA--TACATTATG----GTAAACG-GACT-ATATA---T-TATAT---TGC-ACA-T-TGGTA--A----A---AATTCAT-----AAACACTTA----T---------------A-----------T-TGT-T---ATG-CAAA-C----A---ATAT--ATAATTTT------A-T-A----T-ACGT-----------TATGCAAAC-----AA---A--A---------------TAT---------------------T----TAT---------------------TA-TA------T-ATA--CGTTATGCATAaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcTA---TATACGT---T---ATG-C-AAACA--A----A---A---TATTTATTA------TA----T---------------A-----------TACGT-T---ATG-CATATC----GGTTAAAT--A------T------AGT-A----T-ACGT-----------TATGCAAAC-----AA---A--A---------------TATTATATA--C-A----------T----TATA--CA--AAC----AA---AATA-TA------T-ATA--CAATATGCACAC---------GACCCC-----CAG-AGCGGTACCAGTTTCGCAACA-A--TTCTGA-GAACCAtcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|5 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataatttCA-GAAAGAG--CCCACGTCATCGA---T---T--TTT---GTCGTGTT-CTCATCCAGAC---GCTTGAACA--CCAT-TTCGAAGC-TTTT------GA-TT-GAC-----------------GAA----GATTAT-TGTTCGAGAGTC-TTAAGGGGAG---GGA----GGAAATGT-TAAC-CTTAAG-TGTATTAGAGT--AGAAATATAATATAGTTATTAAGTTGgacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgcagaaagagcccacgtcatcgatttttgtcgtgttctcatccagacgcttgaacaccatttcgaagcttttgattgacgaagattattgttcgagagtcttaaggggagggaggaaatgttaaccttaagtgtattagagtagaaatataatatagttattaagttg
gi|6 : tatgaggagccaaatgtgactatattatgtgacataatttaagatatatattatatatagtgtttgtttatgtttatacatatacgtttaagtaaaatatatactacctcgaaaaatacattatggtaaacggactatatattatattgcacattggtaaaaattcataaacacttatattgttatgcaaacaatatataattttatatacgttatgcaaacaaaatatttattatatatacgttatgcatatcggttaaatatagtatacgttatgcaaacaaaatattatatacattatacaaacaaaatatatatacaatatgcacacgacccccagagcggtaccagtttcgcaacaattctgagaaccagacggtgtaacagtaaatattgccctattacttgggaaaccctgaatataatcgcttgtctgacgccaggatgcaatatctgtgC-A---AA--TAAAT-ATG----GTTAAAT-GACT-ATATT---TATATAT---T---ATGTT-CGGTA--A----AT--A---TAT-----A------TA----T---------------A-----------TA
gi|6 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgCTCA-GAAAGAG--CCTACGTTATTGA---T---T--TTTGGCG-CGTT---CTCATCCAGACGCGTAT---A-T--CCCTTTTCGAAAC-TTTTGACATATA-TT-AAG-----------------AAA----TATAATATGTAAGAattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttctcagaaagagcctacgttattgatttttggcgcgttctcatccagacgcgtatatcccttttcgaaacttttgacatatattaagaaatataatatgtaagaattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : ttttcatctccatatctctgttcataaccgcagcggtgtatgaggcgtcaaacgggactaaattcgatgacataaatatatttatatatgttgtttgtaaatatatatatacgtttaagtaaaaattatacaccctcgcaaataaatatggttaaatgactatatttatatattatgttcggtaaatatatatatataattgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncacgaccccaaagcgggaccagtttcgcaacaatttcgagaaccagaagacgttatagcatatattgcccgattactgggggaaccctaaatgcttgtctgaagctaggatgcaataccttAATATA---TATACGT---T----TA----AGTA--A----A---A---AAT-----A------TA----CACCTTCAACAAATAAA-----------TATGG-TAAAATGACTAA-T----A---TAAT--A------T------A-T-A----T-A--T-----------TG-GCACAT-CGGTAA---A--A---------------TAT-----A--T-AAATATATACGT----TATG--CA--AAA----AA---AATA-TA------T-ATA--TGTTATGCAAACCTAATATATAATACTTTATGCAC-A-TGA--CC---Cattatttgatgaaatatataagaattatttgatgaaatatataagaattatatgatgaaataattaa
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaAC-A---AA--TAAAT-ATG----GTAAAAT-GACTAATATAATATATATAT---TGGCACA-T-CGGTA--A----A---A---TAT-----A------TAAATAT---------------A-----------TACGT-T---ATG-CAAA-A----A---AAAT--A------T------A-T-A----T-ATGT-----------TATGCAAAC-C--T-----A--A---------------TAT-----A--T-A----------------------------------------------------ATA--CTTTATGCACAT---------GACCCcaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaAAA-GCAATCACTTGT-CTGAGGCCAGGATGCAATA----C---TTT-CGCAGAAAGA-GCCTcaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgcagaaagagcctacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|7 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctCA-GAAAGAG--CCTACATCATTGA---T---TTTGTC---G-TGTTAT---CATCCAGAC---GAGTGTA-C--CCCATTTCGAAGC-TTTT------GA-TT-GAT-----------------GAA----GATAAT-TGTTAGAGGGTCGTAAAGGGAAGG-------TGGGAAATGTAAATT-ATTAAG-TATATTAGAAT--AGAAACATAATTTAGTTATTAAAT--TGTTTTATGGATGAATAATAacatcattgattttgtcgtgttatcatccagacgagtgtaccccatttcgaagcttttgattgatgaagataattgttagagggtcgtaaagggaaggtgggaaatgtaaattattaagtatattagaatagaaacataatttagttattaaattgttttatggatgaataatag
gi|9 : atttgcttttaagacatcaaatcatatacaagtacatgtaatttactatgaggcaccaaatgtgactatattcagtgacataaatattatgttttttgtaaatatatatacgtttaagtaaaaaatatacaccttcaacaaataaatatggtaaaatgactaatataatatatatattggcacatcggtaaaatatataaatatatacgttatgcaaaaaaaatatatatatgttatgcaaacctaatatataatactttatgcacatgaccccaaagcagaatcagtctccgagaactagacggtgtaacagtaaatattgcccgattactgaggaagccctaaagcaatcacttgtctgaggccaggatgcaatactttcgT-----------TATGAAAAC-----AA---A--A---------------TAT-----AAAT-ACG--------T----TATG--GA--AAC----AA---AAAAATA------T-ATA--CGTTATGCACAC---------GACCCTT---------------------------------TTTTGA-A---CACGGCC------------CTCATGAAAT-G--CCTACGTCATTGA---A---T--GTT---G-TGTTCTGCTCAGTCAGAC---TATCGCC-A--CAGTATTTGAAGC-TCCG------TG-TT-GAA-----------------AGA----GAAGAT-CATTAGAGGTTCTTTAGGGGGATATCGGAGATGGGAAATATAAAAT-ATTAAT-TATG-TGGAGT--AGAACTACAATTT------------------TATGGATGAAAAATACAGCGCACGGAA--TTAAAAAAAACACCTTTACTTGTGTTGATGC---AATGCAATA----TA--CTT-TTAAGAGATA-GTCTCGAAAGGA---CATGTCTATCACCATAGGCATAGCCGCCGGAGCGTTAGAGTTAA-TGATGTGGCCCTATATTCCGAATTTTTGACATTATTT--AACCACACTTCCTATGGCAAAA--GAGATATCCCCTCAAACATTCGAAATGACTAAGCTGTCAGTg
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AATGACATAATTACAGAGATCCACAGATCTAAGATACCGATCTTCTATACTAATTTAATATATATGGCTGAAATTTCGAGTGGTATCTTTTATAACTTTTTGAACCACTGTCTGAAAATAATAATTTTGGTAACATTGGAATATTAAGCTGACATTTGAATTAATTGACATCTTTTAAAATTGTTACCAGTCATGATTTATTTTCGTTCTGAGTTAAAAAATATTACAGATTGGAAAAAATGTATGCATTTTTAAAAAGAAGTATTTTTTGAAACAAAAAAGGTACCATACTAGTTTCAACAAAGTCTTTTACCTTTTTAACTATCATATCATTTAAATATAAATTTTGTACAGAAAGATAAAGAAGTGAATAATCCATTGGTAGTGAACATTTTTGATTTTTTTTTTTTAAAAATTATGTTGCTTAAAATTTAAAAGAAAACATTATCATGAACAATTTTATGCAGTATTTTTATGCTTTTGTTGTGAAGT
Unaligned ( gi|10 ): TCCATACATAACTATAGTGACTTAATTACAGATGATGGCAGGCTAATAGCAATATAATGCACACGGCTGAAATTTCAGGTGGCATCTTTAGTATTTCTTTGAATCTTTGTCTGAATGAAATAATTTTGGTACGAAAGTTAAGCTGATAAAACTGATAACATTTCCAACTATCAATTATTTAATATTTTTCTTCTGAATTTAAATTATTACGGATTGAAAATGAAAATTGTTGAAATTTTTTACGAAATATTTTTTTTATTTTAACAAAAAATGGTAGTGTACTTGATTTAACAAATACATTTATCAACAAACAATAGAAATAAAAAAAAATATGTAGAAAGATGACAAAGTAAGTTTCCATTGGTGGCGAAAATTTCATATTTCATATAACATTTCCATAGATAATTTACATTTCCGTGGATAACTTACCTTTCCATGGACAATTTCATCAATACTGAGCTCTGTGTATTCATCCTGAAGTA
Unaligned ( gi|16 ): ATATATATGCATATAAAAGTAAAATATAGAATATCTAACGTGATATGTAAGATAAATATATTTATATATATGTGTGTTTTGTGTATATATAACAAAACACGTTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGAAAAAACACAAAATATTGATATGTATGTCGTCCGTTACAAAAAAAATATAGGAAAAACCCAGATGCAATCTGTGATCGGACCCAAGGCTGCAATACCCACAAAGAACATGCTACGTTGTTGACTTTTGTCGTGTTTCCAGACGCTTGCGCCCATTTTCGTAGCATTTGATT
Unaligned ( gi|23 ): TGAGGCGATGAACGTCACTATATTCGGAGTATATACTGTGTTCGTGATTATATATATACTTTTTAGTAAAAAAAATACACCCTCGACAAATAGATATAGTATA
Unaligned ( gi|26 ): ATTTACTGATTTAATTCTTAAATATATGGACGAGTGTATT
Unaligned ( gi|27 ): ACAGTATACTCTTACCAATACTGTTAACGAA