lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                   1                            11111               1   1    11       111111                11     33333                     2   111         4444   1          22       111                   1      
lowQualScore                  :                                                                                                                                                                                                                                                                                                                 3  1  1       5       1           1     2              99      22222    8          6   0 2  33   3   444444        9       55     55555                6  0 3   222      3  2222   3          22     2 444     2             7      
lowQualScore                  :                                                                                                                                                                                                                                                                                                                 .  .  .       .       .           .     .              ..      .....    .          .   . .  ..   .   ......        .       ..     .....                .  . .   ...      .  ....   .          ..     . ...     .             .      
lowQualScore                  :                                                                                                                                                                                                                                                                                                                 8  8  4       7       7           0     5              33      88888    0          2   0 5  88   2   000000        2       22     00000                7  7 3   333      0  5555   3          33     5 555     5             0      
consensus                     :                                                                                                                                                                                                                                                                                                           CGGTTTCCT-ACGACAAAATCAAGTTTT-AAAATATTTTCGTAGAC-GTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAAT-ANAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGG----TCATGTGAGAAAGCTGTCACGT-ACATGTAAGATANAGGAGATTT-TCCTCCATGAA-GAAAANCCNTATCTCNTATGGGCAGAAACAGGGGAA
Reference ( gi|7 )            :                                                                                                                                                                                                                                                                                                           CGGTTTTCT-ACGACAAAATTAAGTTTT-AAAATATTTTCTTAGAC-GTGAAAATGAAAATGTATATGATGACAATTT-GTGGATAAGGTAAT-AGAT--TACAAAAAGTG-ATTTAGTCCAAGATTTTCTTCAGG----GCATGTGAGAAAGCTGTCACGTGACATGGAAGATATAG----TTT-TCCTCCATGAG-GAAAACCTGCATCTTCTATGAGCAGAAATTGGAGAA
gi|10                         :                                                                                                                                                                                                                                                                                                           CGGTTTCCT-ACAACAAGATCAAGTTCT-TAAATAGTTTCGTAGAC-ATGAAAATGAAAATATATATGATTACGACTT-GTGAATAAGGAAAT-ATAT--CACAAACAATG-ACTTTGTGTCAGATTATCGTCAGGTCATGCATGTGAGAAAGCTGTCACATGACATGTAAGATAGAG----TTT-TCCTCCATGAATGAAA
gi|27                         :                                                                                                                                                                                                                                                                                                           CGGTTTCCT-ACGACAAAATCAAGTTTT-AAAATATTTTCGTAGAC-G
gi|32                         :                                                                                                                                                                                                                                                                                                           CGGTTTCCT-ATGGCAAAATTAAGTTTT-AAAATATTTTTGTAGAC-
gi|26                         :                                                                                                                                                                                                                                                                                                          aCGGTTTCCT-ACGACAAAATCAAGTTTA-AAAATATTTCCGTAGAC-
gi|28                         :                                                                                                                                                                                                                                                                                                           CGGTTTCCT-ACGACAAAATCAAGTTTG-AAATTGTTTTCGTAGAC-Ga
gi|14                         :                                                                                                                                                                                                                                                                                                           CGGTGTT---ACAACAAAACCAATTTGT-AAAATATTTACGTAATA-GTGGAAATAAAAGTATATACGA-GA-----T-GCTGATAAAG-AATAAGATGATAC-AAAAGT---TCTAGTCCAAAATGTTC
gi|34                         :                                                                                                                                                                                                                                                                                                          aCAGTTTCCT-ATGACAAAATCAAGTTTT-AAAATTTTTTCCTAGAgt
gi|19                         :                                                                                                                                                                                                                                                                                                           CGATTGCCT-ACAACAAAATTAGGTTTTAAAAATAGTTTATTAGAT-GTGATAATGAATATAAATAt
gi|30                         :                                                                                                                                                                                                                                                                                                          aCAGTTTCCT-ACAACACTATCAAGTTTT-AAAATATTTTCCTAGAC-
gi|42                         :                                                                                                                                                                                                                                                                                                           CGGTTTCCT-ACGACAAAATCAAGTTTT-AAAATGTa
gi|37                         :                                                                                                                                                                                                                                                                                                           CAGTTTCCT-ACAACAAAATCAAGTTTT-AAAATATTTCTGTAGaa
gi|40                         :                                                                                                                                                                                                                                                                                                           CGGTTTCCT-A------AATCAAGTTTT-AGAATATTTTCTTAGAC-GTg
gi|36                         :                                                                                                                                                                                                                                                                                                          aCGGTTTTCT-ACAACAAAATCAAGTTTA-AAACTGTTCTCGTAG
gi|21                         :                                                                                                                                                                                                                                                                                                         taCGGTTTCCTTAC-ATAAAATCAAATTTT-GAAATGTTTTTGTAAGC-GTATAAATGAA
gi|29                         :                                                                                                                                                                                                                                                                                                          aCAGTTTTCT-ACAATAAAATCAAGATTT-TAAATATTTTTGTAG
gi|31                         :                                                                                                                                                                                                                                                                                                          taGGCTTCCT-TCGACAAAATCAAGTTTT-AAAATATTTTAGTAGAC-GTg
gi|23                         :                                                                                                                                                                                                                                                                                                            GGTTTCCT-ACGAAAAAATCAAGTTTT-AAGATAGTTTCATAGAC-GT
gi|38                         :                                                                                                                                                                                                                                                                                                           tGGTTTCCT-ACGACAAAGTCAAGTTTA-AAAATATTTTCGTAGA
gi|35                         :                                                                                                                                                                                                                                                                                                            tGTTTCCT-ACAACAAAATCAAGTCGT-AAAATATTTTCTT
gi|33                         :                                                                                                                                                                                                                                                                                                             aTTTCCT-ACAACAAAATCAAGTTTT-AAAATATTTTCTTAGGC-GTtagcg
gi|2                          :                                                                                                                                                                                                                                                                                                                 tCT-ACAAAAAAATAAAGTTTT-AAAATATTTTC-------GTGAAAACG----------TGATTATGATTT-GTGGATAAGGAAAT-AGAT--TACAAAAATTG-GTTTAGTCC-AGATTTTTGTCAGG----TCATATGAGAAAGCTGT--CGT-ACA--GAAAAT
gi|5                          : tttttatccaacatgggtgaactcgtgattgattcttacgttatttctcccattcagctcagtcaaatgacagaccctcataatggccatcatcacaaaaatattttactttttaaatacatgtttaatgcctcaaatttcacatatatatgaagaaattgatattttaaagtacatactaaatataacccagaaattacagcacagagtttgttttattaattcacctcaaatataatttttaaccttaacttgttcttttaggtaggccagacgtaataaatataaatggtgacgtcattgatgT-ACAACAAAACCAAATTT--AAAATATTC----AGGT-GTAAAAATGAAAATATATATGATTACGATTTAATGGATGA
gi|1                          :                                                                                                                                                                                          tgttttaataatagccttaaaatatattttttccttgactctgttttcgtaggtaagccagatttcctagatatatacgttgtcttcattattctgacgtaacggcaaactgtttatttacactgtcgAAAACAAAGTATT-AAAATATTTT--TATATTGTGAAAATAAAAATACATATGATTACGATTT-GTGGACAAAATAAT-ATGT--TACACAA-TTGTATTTAGTCTAAGATTTTAGACAGG----TCATGTGAGAAAGCTGTCATAC-ACATGTATGGGATAGGAGATTTATCTACCATGGT-GAAAAGCCGTATCTCCTATGAACAGAAATAGGGGAAtgatgtagtgattcatttacgttattttctcaaatcttaaac
gi|22                         :                                                                                   aagtatcaaaagtcatcatgagtatccatgttggttcgaatctcacaagaagctcaaagttacatgaaggtaaacttacctgcatgaatgaactcattatggactttttctcccattcatctcagttaaatgattggccctaggcaacggccgtcatcacaaagatagtttattttttaaatgcatgtttaaagcgcaaactttcacatgggtatgaagaaatcgacattttaatgtaagtctaaactagaaattacccctgtattttgtttgtttagataaatcacttcaaatataattgttacattgaccctgtcattgttggtaagtaagacgtcataaatatatatgttgacatcaatattctgacgtaacatctgtttcttttatattggttgctT-TCCTCCATGAA-GAAAACCCTTATCTTATATGGGCAGAAACAGAAGAA

Unaligned ( gi|3 ): TATAAGAATCCACCATGAGTATCTGTGTGGGATAGAAATATATTACTGGAGGGGTTGAAATTACATGCAGGGACAAGCTCTGCTGAGTTCACTGCATGTATTTTGATCCAAAGGGTGAGATTTGGATGAACTCTTATTCTTCCCTCCCATTCATCTCAGTCAAATGACAGATATCCGATGATGGCCTTCATCACAAAAATATTCTATTTTTTAAATGCATGTTTAACGCCCAAAATTTCACAGATATTATTATGAAGAAATGGACATTTTAAAGTACATACTGAAAGTATGTACCAGAAATTACACCTGTTTATCACTCTGCATATTGTTTGTTTAAATCATTCACTTCAAATATATTTTGTACTCTGACATAAATATATACGTTGATGTCATTATTCTGACATAACGTCTATCTCTTTTT
Unaligned ( gi|4 ): TTCCTGCAAATAATTCCCAATGCAGAGGGTGAGATTACTCTAACTTCATCCTTGATTATTTTTTTGTCATTCATCTAAGTCAAATGTTGGCCATCATTTCAAAAATATCTTACATTTTAAATGCATGTTTAACACCCAAAATTCAACAGAATATTCATTTTAAAATACCAGGTATTACAGAAATATTTACACCCGTTAAACTTCCAGCACATTGTTTAATAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
Unaligned ( gi|6 ): TTTTAATGCGCGTTTAACGCCAAAAATTTCACATATAGAGATCTATATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTT
Unaligned ( gi|8 ): GACAAGGCTCTATGGAATTTCCTGCATGTTATTTTGACCAAGAGGTGAGCATTTTTTTTATCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGTGTTTAACGTCGAAAATGTCACATAAATTTAGAAAATTGGATAATTTAAAGTACATAC
Unaligned ( gi|9 ): AATATAAGAATCCATTATGAGTATCCGTGTTGGATAGCAATATATCAGACAGAGCCTAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT
Unaligned ( gi|11 ): CGTCAGAATAATGTCATGAATATCAAGAATAGAAGATAAAAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAAGACTCTGCCGAGTTTTCTGTATGTAATTTTGACCCAGAGG
Unaligned ( gi|12 ): TCACCCGAGGGGTCAAAACTATATGCAGGGACGAGGCTTTGTTTTGAGTCAAAGGCTGAGATTTTTCTTTCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|13 ): GTCATACTGTTATATTATAAAAATAAGAACATAAGAATACATAATGAGTATCCATCTCACCCGAGGTATCAAAATGGCATTCAGGGACGAAACTCTGCGGAGTTTCCGGCATATAATTTTGACCCA
Unaligned ( gi|15 ): TAAGTCACTTCGAATATAATTTTACCCTGATATTATTCTTGAAGGTAAGCAAGACATCAAAAATATATACGTTTATGCCATTATTCTGTGATAACGCCTATCTCTTTTT
Unaligned ( gi|16 ): GACCCGTAATGACCATCGTCACAAATAATCAAACTTTTATATTGCGTGTTTAACGTCCAAAATTTCACAGATATATGAAGAAATCGACATTT
Unaligned ( gi|17 ): GATAATGGACGTCATCACGAAAATATGCTACTTTTTAAATGCATATCTAACGCTCAAACTTTCACAGA
Unaligned ( gi|18 ): ACTTTTTAAATGGGTGTTTAACGCCCAGAATTGCGCAGATATGTAAATAAATCGACATTTTAAAGT
Unaligned ( gi|20 ): CTTTTTTAATGCGTGTTTAACGCCCAAAATTTCGCATATATATGAAGAAATGGACAT
Unaligned ( gi|24 ): ATACGTTGACGTCATTTATCTGGCGTAATTTCTATATTTTTTCAT
Unaligned ( gi|25 ): ATACGTGTGCGTCACTATATATTCTGACGAACGGCAAACTCTTTC
Unaligned ( gi|39 ): ACTTTTTAATGCGGTTTAACGCCCAAAATTGCGCATGCATGT
Unaligned ( gi|41 ): ATGAAGAAATAAACAACTTGCTTATGAATGGCAAAAT
Unaligned ( gi|43 ): TTTTAATACGTGTTTAACGCCCAATATTTCGCATA
Unaligned ( gi|44 ): CATTATTCTGACGCAACGCCTATCTCTTTTT
Unaligned ( gi|45 ): CTTTTTAAATGCGTGTTTAACGCCCAAAATT
Unaligned ( gi|46 ): AACAAAATCAAGTTTTGACATATTTTCATAG

lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 11                                     2222                     2               4444   1          11                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         1   0                1                               0            1  6               1  11   0   44  8         5               1111                2    0            1  4444   0          11     1  1     11    0       0   0   
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         .   .                .                               .            .  .               .  ..   .   ..  .         .               ....                .    .            .  ....   .          ..     .  .     ..    .       .   .   
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         7   9                6                               3            7  7               0  00   8   66  0         6               2222                5    0            0  0000   0          22     0  0     77    7       7   7   
consensus                     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGTGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
Reference ( family-1490 )     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATANAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGT-ACATGTAAGATANAGGAGATTT-TCCTCCATGAA-GAAAANCCNTATCTCNTATGGGCAGAAACAGGGGAA
gi|1                          :                                                                                                                                                                                                                                                                                                                                                                                                                                AAAACAAAGTATTA-AAATATTTTTATAT-TGTGAAAATAAAAATACATATGATTACGATTT-GTGGACAAAATAATATGT--TAC-ACAATTGTATTTAGTCTAAGATTTTAGACAGGT----CATGTGAGAAAGCTGTCATAC-ACATGTATGGGATAGGAGATTTATCTACCATGGT-GAAAAGCCGTATCTCCTATGAACAGAAATAGGGGAA
gi|10                         : aagtatcaaaagtcatcatgagtatccatgttggttcgaatctcacaagaagctcaaagttacatgaaggtaaacttacctgcatgaatgaactcattatggactttttctcccattcatctcagttaaatgattggccctaggcaacggccgtcatcacaaagatagtttattttttaaatgcatgtttaaagcgcaaactttcacatgggtatgaagaaatcgacattttaatgtaagtctaaactagaaattacccctgtattttgtttgtttagataaatcacttcaaatataattgttacattgaccctgtcattgttggtaagtaagacgtcataaatatatatgttgacatcaatattctgacgtaacatctgtttcttttatattggttgctCGGTTTCC-TACAACAAGATCAAGTTCTT-AAATAGTTTCGTAGACATGAAAATGAAAATATATATGATTACGACTT-GTGAATAAGGAAATATAT--CACAAACAATG-ACTTTGTGTCAGATTATCGTCAGGTCATGCATGTGAGAAAGCTGTCACATGACATGTAAGATAGAG----TTT-TCCTCCATGAATGAAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTGT---TACAACAAAACCAATTTGTA-AAATATTTACGTAATAGTGGAAATAAAAGTATATACGA----GA--T-GCTGATAAAGAATAAGATGATACAAAA---G-TTCTAGTCCAAAATGTTCGT
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGATTGCC-TACAACAAAATTAGGTTTTAAAAATAGTTTATTAGATGTGATAATGAATATAAATA
gi|2                          :                                                                                                                                                                                                                                                                                                                                                                                                                       aC-TACAAAAAAATAAAGTTTTA-AAATATTTTCGT------GAAAACG----------TGATTATGATTT-GTGGATAAGGAAATAGAT--TACAAAAATTG-GTTTAGTCC-AGATTTTTGTCAGGT----CATATGAGAAAGCTGT--CGT-ACA
gi|21                         :                                                                                               tttttatccaacatgggtgaactcgtgattgattcttacgttatttctcccattcagctcagtcaaatgacagaccctcataatggccatcatcacaaaaatattttactttttaaatacatgtttaatgcctcaaatttcacatatatatgaagaaattgatattttaaagtacatactaaatataacccagaaattacagcacagagtttgttttattaattcacctcaaatataatttttaaccttaacttgttcttttaggtaggccagacgtaataaatataaatggtgacgtcattgatgCGGTTTCCTTAC-ATAAAATCAAATTTTG-AAATGTTTTTGTAAGCGTATAAATGAAgaaaat
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aT-TCCTCCATGAA-GAAAACCCTTATCTTATATGGGCAGAAACAGAAGAA
gi|23                         :                                                                                                                                                                                                                                                                                                                                                                                                                 cGGTTTCC-TACGAAAAAATCAAGTTTTA-AGATAGTTTCATAGACGTagtg
gi|26                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TACGACAAAATCAAGTTTAA-AAATATTTCCGTAGAC
gi|27                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGa
gi|28                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTGA-AATTGTTTTCGTAGACG
gi|29                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CAGTTTTC-TACAATAAAATCAAGATTTT-AAATATTTTTGTAG
gi|30                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACACTATCAAGTTTTA-AAATATTTTCCTAGACg
gi|31                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTCC-TTCGACAAAATCAAGTTTTA-AAATATTTTAGTAGACGTa
gi|32                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TATGGCAAAATTAAGTTTTA-AAATATTTTTGTAGAC
gi|33                         :                                                                                                                                                                                                                                                                                                                                                                                                                   aTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTTCTTAGGCGT
gi|34                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCAGTTTCC-TATGACAAAATCAAGTTTTA-AAATTTTTTCCTAGA
gi|35                         :                                                                                                                                                                                                                                                                                                                                                                                                                   GTTTCC-TACAACAAAATCAAGTCGTA-AAATATTTTCt
gi|36                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTTC-TACAACAAAATCAAGTTTAA-AACTGTTCTCGTAGtttagcg
gi|37                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTCTGTAG
gi|38                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGTTTCC-TACGACAAAGTCAAGTTTAA-AAATATTTTCGTAGAg
gi|40                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TA------AATCAAGTTTTA-GAATATTTTCTTAGACGT
gi|42                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTCC-TACGACAAAATCAAGTTTTA-AAATGT
gi|46                         :                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAAATCAAGTTTTG-ACATATTTTCATAGaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                     aTCG-TACAACAAAACCAAATTT-A-AAATATTC----AGGTGTAAAAATGAAAATATATATGATTACGATTTAATGGATGATGA
gi|7                          :                                                                                                                                                                                                                                                                                    tgttttaataatagccttaaaatatattttttccttgactctgttttcgtaggtaagccagatttcctagatatatacgttgtcttcattattctgacgtaacggcaaactgtttatttacactgCGGTTTTC-TACGACAAAATTAAGTTTTA-AAATATTTTCTTAGACGTGAAAATGAAAATGTATATGATGACAATTT-GTGGATAAGGTAATAGAT--TACAAAAAGTG-ATTTAGTCCAAGATTTTCTTCAGGG----CATGTGAGAAAGCTGTCACGTGACATGGAAGATATAG----TTT-TCCTCCATGAG-GAAAACCTGCATCTTCTATGAGCAGAAATTGGAGAAtgtagtgattcatttacgttattttctcaaatcttaaac

Unaligned ( gi|3 ): TATAAGAATCCACCATGAGTATCTGTGTGGGATAGAAATATATTACTGGAGGGGTTGAAATTACATGCAGGGACAAGCTCTGCTGAGTTCACTGCATGTATTTTGATCCAAAGGGTGAGATTTGGATGAACTCTTATTCTTCCCTCCCATTCATCTCAGTCAAATGACAGATATCCGATGATGGCCTTCATCACAAAAATATTCTATTTTTTAAATGCATGTTTAACGCCCAAAATTTCACAGATATTATTATGAAGAAATGGACATTTTAAAGTACATACTGAAAGTATGTACCAGAAATTACACCTGTTTATCACTCTGCATATTGTTTGTTTAAATCATTCACTTCAAATATATTTTGTACTCTGACATAAATATATACGTTGATGTCATTATTCTGACATAACGTCTATCTCTTTTT
Unaligned ( gi|4 ): TTCCTGCAAATAATTCCCAATGCAGAGGGTGAGATTACTCTAACTTCATCCTTGATTATTTTTTTGTCATTCATCTAAGTCAAATGTTGGCCATCATTTCAAAAATATCTTACATTTTAAATGCATGTTTAACACCCAAAATTCAACAGAATATTCATTTTAAAATACCAGGTATTACAGAAATATTTACACCCGTTAAACTTCCAGCACATTGTTTAATAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
Unaligned ( gi|6 ): TTTTAATGCGCGTTTAACGCCAAAAATTTCACATATAGAGATCTATATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTT
Unaligned ( gi|8 ): GACAAGGCTCTATGGAATTTCCTGCATGTTATTTTGACCAAGAGGTGAGCATTTTTTTTATCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGTGTTTAACGTCGAAAATGTCACATAAATTTAGAAAATTGGATAATTTAAAGTACATAC
Unaligned ( gi|9 ): AATATAAGAATCCATTATGAGTATCCGTGTTGGATAGCAATATATCAGACAGAGCCTAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT
Unaligned ( gi|11 ): CGTCAGAATAATGTCATGAATATCAAGAATAGAAGATAAAAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAAGACTCTGCCGAGTTTTCTGTATGTAATTTTGACCCAGAGG
Unaligned ( gi|12 ): TCACCCGAGGGGTCAAAACTATATGCAGGGACGAGGCTTTGTTTTGAGTCAAAGGCTGAGATTTTTCTTTCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|13 ): GTCATACTGTTATATTATAAAAATAAGAACATAAGAATACATAATGAGTATCCATCTCACCCGAGGTATCAAAATGGCATTCAGGGACGAAACTCTGCGGAGTTTCCGGCATATAATTTTGACCCA
Unaligned ( gi|15 ): TAAGTCACTTCGAATATAATTTTACCCTGATATTATTCTTGAAGGTAAGCAAGACATCAAAAATATATACGTTTATGCCATTATTCTGTGATAACGCCTATCTCTTTTT
Unaligned ( gi|16 ): GACCCGTAATGACCATCGTCACAAATAATCAAACTTTTATATTGCGTGTTTAACGTCCAAAATTTCACAGATATATGAAGAAATCGACATTT
Unaligned ( gi|17 ): GATAATGGACGTCATCACGAAAATATGCTACTTTTTAAATGCATATCTAACGCTCAAACTTTCACAGA
Unaligned ( gi|18 ): ACTTTTTAAATGGGTGTTTAACGCCCAGAATTGCGCAGATATGTAAATAAATCGACATTTTAAAGT
Unaligned ( gi|20 ): CTTTTTTAATGCGTGTTTAACGCCCAAAATTTCGCATATATATGAAGAAATGGACAT
Unaligned ( gi|24 ): ATACGTTGACGTCATTTATCTGGCGTAATTTCTATATTTTTTCAT
Unaligned ( gi|25 ): ATACGTGTGCGTCACTATATATTCTGACGAACGGCAAACTCTTTC
Unaligned ( gi|39 ): ACTTTTTAATGCGGTTTAACGCCCAAAATTGCGCATGCATGT
Unaligned ( gi|41 ): ATGAAGAAATAAACAACTTGCTTATGAATGGCAAAAT
Unaligned ( gi|43 ): TTTTAATACGTGTTTAACGCCCAATATTTCGCATA
Unaligned ( gi|44 ): CATTATTCTGACGCAACGCCTATCTCTTTTT
Unaligned ( gi|45 ): CTTTTTAAATGCGTGTTTAACGCCCAAAATT

lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 11                                     2222                                     2222   1          11                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         1   0                1                               0            1  6                  11   0   44  8         5               1111                   0 6               8888   0          11                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         .   .                .                               .            .  .                  ..   .   ..  .         .               ....                   . .               ....   .          ..                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         7   9                6                               3            7  7                  00   8   66  0         6               2222                   7 7               3333   0          22                                    
consensus                     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGCGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
Reference ( family-1490 )     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGTGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
gi|1                          :                                                                                                                                                                                                                                                                                                                                                                                                                                AAAACAAAGTATTA-AAATATTTTTATAT-TGTGAAAATAAAAATACATATGATTACGATTT-GTGGACAAAATAATATGT--TAC-ACAATTGTATTTAGTCTAAGATTTTAGACAGGT----CATGTGAGAAAGCTGTCATAC-ACATGTATGGGATAGGAGATTTATCTACCATGGT-GAAAAGCCGTATCTCCTATGAACAGAAATAGGGGAA
gi|10                         : aagtatcaaaagtcatcatgagtatccatgttggttcgaatctcacaagaagctcaaagttacatgaaggtaaacttacctgcatgaatgaactcattatggactttttctcccattcatctcagttaaatgattggccctaggcaacggccgtcatcacaaagatagtttattttttaaatgcatgtttaaagcgcaaactttcacatgggtatgaagaaatcgacattttaatgtaagtctaaactagaaattacccctgtattttgtttgtttagataaatcacttcaaatataattgttacattgaccctgtcattgttggtaagtaagacgtcataaatatatatgttgacatcaatattctgacgtaacatctgtttcttttatattggttgctCGGTTTCC-TACAACAAGATCAAGTTCTT-AAATAGTTTCGTAGACATGAAAATGAAAATATATATGATTACGACTT-GTGAATAAGGAAATATAT--CACAAACAATG-ACTTTGTGTCAGATTATCGTCAGGTCATGCATGTGAGAAAGCTGTCACATGACATGTAAGATAGAG----TTT-TCCTCCATGAATGAAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTGT---TACAACAAAACCAATTTGTA-AAATATTTACGTAATAGTGGAAATAAAAGTATATACGA----GA--T-GCTGATAAAGAATAAGATGATACAAAA---G-TTCTAGTCCAAAATGTTCGT
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGATTGCC-TACAACAAAATTAGGTTTTAAAAATAGTTTATTAGATGTGATAATGAATATAAATA
gi|2                          :                                                                                                                                                                                                                                                                                                                                                                                                                       aC-TACAAAAAAATAAAGTTTTA-AAATATTTTCGT------GAAAACG----------TGATTATGATTT-GTGGATAAGGAAATAGAT--TACAAAAATTG-GTTTAGTCC-AGATTTTTGTCAGGT----CATATGAGAAAGCTGTC
gi|21                         :                                                                                               tttttatccaacatgggtgaactcgtgattgattcttacgttatttctcccattcagctcagtcaaatgacagaccctcataatggccatcatcacaaaaatattttactttttaaatacatgtttaatgcctcaaatttcacatatatatgaagaaattgatattttaaagtacatactaaatataacccagaaattacagcacagagtttgttttattaattcacctcaaatataatttttaaccttaacttgttcttttaggtaggccagacgtaataaatataaatggtgacgtcattgatgCGGTTTCCTTAC-ATAAAATCAAATTTTG-AAATGTTTTTGTAAGCGTATAAATGAAgtacagaaaat
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aT-TCCTCCATGAA-GAAAACCCTTATCTTATATGGGCAGAAACAGAAGAA
gi|23                         :                                                                                                                                                                                                                                                                                                                                                                                                                 cGGTTTCC-TACGAAAAAATCAAGTTTTA-AGATAGTTTCATAGACGTagtg
gi|26                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TACGACAAAATCAAGTTTAA-AAATATTTCCGTAGAC
gi|27                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGa
gi|28                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTGA-AATTGTTTTCGTAGACG
gi|29                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CAGTTTTC-TACAATAAAATCAAGATTTT-AAATATTTTTGTAG
gi|30                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACACTATCAAGTTTTA-AAATATTTTCCTAGACg
gi|31                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTCC-TTCGACAAAATCAAGTTTTA-AAATATTTTAGTAGACGTa
gi|32                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TATGGCAAAATTAAGTTTTA-AAATATTTTTGTAGAC
gi|33                         :                                                                                                                                                                                                                                                                                                                                                                                                                   aTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTTCTTAGGCGT
gi|34                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCAGTTTCC-TATGACAAAATCAAGTTTTA-AAATTTTTTCCTAGA
gi|35                         :                                                                                                                                                                                                                                                                                                                                                                                                                   GTTTCC-TACAACAAAATCAAGTCGTA-AAATATTTTCt
gi|36                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTTC-TACAACAAAATCAAGTTTAA-AACTGTTCTCGTAGtttagcg
gi|37                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTCTGTAG
gi|38                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGTTTCC-TACGACAAAGTCAAGTTTAA-AAATATTTTCGTAGAg
gi|40                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TA------AATCAAGTTTTA-GAATATTTTCTTAGACGT
gi|42                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTCC-TACGACAAAATCAAGTTTTA-AAATGT
gi|46                         :                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAAATCAAGTTTTG-ACATATTTTCATAGaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                     aTCG-TACAACAAAACCAAATTT-A-AAATATTC----AGGTGTAAAAATGAAAATATATATGATTACGATTTAATGGATGATGATGTAG
gi|7                          :                                                                                                                                                                                                                                                                                    tgttttaataatagccttaaaatatattttttccttgactctgttttcgtaggtaagccagatttcctagatatatacgttgtcttcattattctgacgtaacggcaaactgtttatttacactgCGGTTTTC-TACGACAAAATTAAGTTTTA-AAATATTTTCTTAGACGTGAAAATGAAAATGTATATGATGACAATTT-GTGGATAAGGTAATAGAT--TACAAAAAGTG-ATTTAGTCCAAGATTTTCTTCAGGG----CATGTGAGAAAGCTGTCACGTGACATGGAAGATATAG----TTT-TCCTCCATGAG-GAAAACCTGCATCTTCTATGAGCAGAAATTGGAGAAtgattcatttacgttattttctcaaatcttaaac

Unaligned ( gi|3 ): TATAAGAATCCACCATGAGTATCTGTGTGGGATAGAAATATATTACTGGAGGGGTTGAAATTACATGCAGGGACAAGCTCTGCTGAGTTCACTGCATGTATTTTGATCCAAAGGGTGAGATTTGGATGAACTCTTATTCTTCCCTCCCATTCATCTCAGTCAAATGACAGATATCCGATGATGGCCTTCATCACAAAAATATTCTATTTTTTAAATGCATGTTTAACGCCCAAAATTTCACAGATATTATTATGAAGAAATGGACATTTTAAAGTACATACTGAAAGTATGTACCAGAAATTACACCTGTTTATCACTCTGCATATTGTTTGTTTAAATCATTCACTTCAAATATATTTTGTACTCTGACATAAATATATACGTTGATGTCATTATTCTGACATAACGTCTATCTCTTTTT
Unaligned ( gi|4 ): TTCCTGCAAATAATTCCCAATGCAGAGGGTGAGATTACTCTAACTTCATCCTTGATTATTTTTTTGTCATTCATCTAAGTCAAATGTTGGCCATCATTTCAAAAATATCTTACATTTTAAATGCATGTTTAACACCCAAAATTCAACAGAATATTCATTTTAAAATACCAGGTATTACAGAAATATTTACACCCGTTAAACTTCCAGCACATTGTTTAATAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
Unaligned ( gi|6 ): TTTTAATGCGCGTTTAACGCCAAAAATTTCACATATAGAGATCTATATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTT
Unaligned ( gi|8 ): GACAAGGCTCTATGGAATTTCCTGCATGTTATTTTGACCAAGAGGTGAGCATTTTTTTTATCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGTGTTTAACGTCGAAAATGTCACATAAATTTAGAAAATTGGATAATTTAAAGTACATAC
Unaligned ( gi|9 ): AATATAAGAATCCATTATGAGTATCCGTGTTGGATAGCAATATATCAGACAGAGCCTAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT
Unaligned ( gi|11 ): CGTCAGAATAATGTCATGAATATCAAGAATAGAAGATAAAAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAAGACTCTGCCGAGTTTTCTGTATGTAATTTTGACCCAGAGG
Unaligned ( gi|12 ): TCACCCGAGGGGTCAAAACTATATGCAGGGACGAGGCTTTGTTTTGAGTCAAAGGCTGAGATTTTTCTTTCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|13 ): GTCATACTGTTATATTATAAAAATAAGAACATAAGAATACATAATGAGTATCCATCTCACCCGAGGTATCAAAATGGCATTCAGGGACGAAACTCTGCGGAGTTTCCGGCATATAATTTTGACCCA
Unaligned ( gi|15 ): TAAGTCACTTCGAATATAATTTTACCCTGATATTATTCTTGAAGGTAAGCAAGACATCAAAAATATATACGTTTATGCCATTATTCTGTGATAACGCCTATCTCTTTTT
Unaligned ( gi|16 ): GACCCGTAATGACCATCGTCACAAATAATCAAACTTTTATATTGCGTGTTTAACGTCCAAAATTTCACAGATATATGAAGAAATCGACATTT
Unaligned ( gi|17 ): GATAATGGACGTCATCACGAAAATATGCTACTTTTTAAATGCATATCTAACGCTCAAACTTTCACAGA
Unaligned ( gi|18 ): ACTTTTTAAATGGGTGTTTAACGCCCAGAATTGCGCAGATATGTAAATAAATCGACATTTTAAAGT
Unaligned ( gi|20 ): CTTTTTTAATGCGTGTTTAACGCCCAAAATTTCGCATATATATGAAGAAATGGACAT
Unaligned ( gi|24 ): ATACGTTGACGTCATTTATCTGGCGTAATTTCTATATTTTTTCAT
Unaligned ( gi|25 ): ATACGTGTGCGTCACTATATATTCTGACGAACGGCAAACTCTTTC
Unaligned ( gi|39 ): ACTTTTTAATGCGGTTTAACGCCCAAAATTGCGCATGCATGT
Unaligned ( gi|41 ): ATGAAGAAATAAACAACTTGCTTATGAATGGCAAAAT
Unaligned ( gi|43 ): TTTTAATACGTGTTTAACGCCCAATATTTCGCATA
Unaligned ( gi|44 ): CATTATTCTGACGCAACGCCTATCTCTTTTT
Unaligned ( gi|45 ): CTTTTTAAATGCGTGTTTAACGCCCAAAATT

lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 11                                     2222                                     2222   1          11                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         1   0                1                               0            1  6                  11   0   44  8         5               1111                   888               8888   0          11                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         .   .                .                               .            .  .                  ..   .   ..  .         .               ....                   ...               ....   .          ..                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         7   9                6                               3            7  7                  00   8   66  0         6               2222                   000               3333   0          22                                    
consensus                     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGCGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
Reference ( family-1490 )     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGCGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
gi|1                          :                                                                                                                                                                                                                                                                                                                                                                                                                                AAAACAAAGTATTA-AAATATTTTTATAT-TGTGAAAATAAAAATACATATGATTACGATTT-GTGGACAAAATAATATGT--TAC-ACAATTGTATTTAGTCTAAGATTTTAGACAGGT----CATGTGAGAAAGCTGTCATAC-ACATGTATGGGATAGGAGATTTATCTACCATGGT-GAAAAGCCGTATCTCCTATGAACAGAAATAGGGGAA
gi|10                         : aagtatcaaaagtcatcatgagtatccatgttggttcgaatctcacaagaagctcaaagttacatgaaggtaaacttacctgcatgaatgaactcattatggactttttctcccattcatctcagttaaatgattggccctaggcaacggccgtcatcacaaagatagtttattttttaaatgcatgtttaaagcgcaaactttcacatgggtatgaagaaatcgacattttaatgtaagtctaaactagaaattacccctgtattttgtttgtttagataaatcacttcaaatataattgttacattgaccctgtcattgttggtaagtaagacgtcataaatatatatgttgacatcaatattctgacgtaacatctgtttcttttatattggttgctCGGTTTCC-TACAACAAGATCAAGTTCTT-AAATAGTTTCGTAGACATGAAAATGAAAATATATATGATTACGACTT-GTGAATAAGGAAATATAT--CACAAACAATG-ACTTTGTGTCAGATTATCGTCAGGTCATGCATGTGAGAAAGCTGTCACATGACATGTAAGATAGAG----TTT-TCCTCCATGAATGAAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTGT---TACAACAAAACCAATTTGTA-AAATATTTACGTAATAGTGGAAATAAAAGTATATACGA----GA--T-GCTGATAAAGAATAAGATGATACAAAA---G-TTCTAGTCCAAAATGTTCGT
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGATTGCC-TACAACAAAATTAGGTTTTAAAAATAGTTTATTAGATGTGATAATGAATATAAATA
gi|2                          :                                                                                                                                                                                                                                                                                                                                                                                                                       aC-TACAAAAAAATAAAGTTTTA-AAATATTTTCGT------GAAAACG----------TGATTATGATTT-GTGGATAAGGAAATAGAT--TACAAAAATTG-GTTTAGTCC-AGATTTTTGTCAGGT----CATATGAGAAAGCTGTC
gi|21                         :                                                                                               tttttatccaacatgggtgaactcgtgattgattcttacgttatttctcccattcagctcagtcaaatgacagaccctcataatggccatcatcacaaaaatattttactttttaaatacatgtttaatgcctcaaatttcacatatatatgaagaaattgatattttaaagtacatactaaatataacccagaaattacagcacagagtttgttttattaattcacctcaaatataatttttaaccttaacttgttcttttaggtaggccagacgtaataaatataaatggtgacgtcattgatgCGGTTTCCTTAC-ATAAAATCAAATTTTG-AAATGTTTTTGTAAGCGTATAAATGAAgtacagaaaat
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aT-TCCTCCATGAA-GAAAACCCTTATCTTATATGGGCAGAAACAGAAGAA
gi|23                         :                                                                                                                                                                                                                                                                                                                                                                                                                 cGGTTTCC-TACGAAAAAATCAAGTTTTA-AGATAGTTTCATAGACGTagtg
gi|26                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TACGACAAAATCAAGTTTAA-AAATATTTCCGTAGAC
gi|27                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGa
gi|28                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTGA-AATTGTTTTCGTAGACG
gi|29                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CAGTTTTC-TACAATAAAATCAAGATTTT-AAATATTTTTGTAG
gi|30                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACACTATCAAGTTTTA-AAATATTTTCCTAGACg
gi|31                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTCC-TTCGACAAAATCAAGTTTTA-AAATATTTTAGTAGACGTa
gi|32                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TATGGCAAAATTAAGTTTTA-AAATATTTTTGTAGAC
gi|33                         :                                                                                                                                                                                                                                                                                                                                                                                                                   aTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTTCTTAGGCGT
gi|34                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCAGTTTCC-TATGACAAAATCAAGTTTTA-AAATTTTTTCCTAGA
gi|35                         :                                                                                                                                                                                                                                                                                                                                                                                                                   GTTTCC-TACAACAAAATCAAGTCGTA-AAATATTTTCt
gi|36                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTTC-TACAACAAAATCAAGTTTAA-AACTGTTCTCGTAGtttagcg
gi|37                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTCTGTAG
gi|38                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGTTTCC-TACGACAAAGTCAAGTTTAA-AAATATTTTCGTAGAg
gi|40                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TA------AATCAAGTTTTA-GAATATTTTCTTAGACGT
gi|42                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTCC-TACGACAAAATCAAGTTTTA-AAATGT
gi|46                         :                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAAATCAAGTTTTG-ACATATTTTCATAGaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                     aTCG-TACAACAAAACCAAATTT-A-AAATATTC----AGGTGTAAAAATGAAAATATATATGATTACGATTTAATGGATGATGATGTAG
gi|7                          :                                                                                                                                                                                                                                                                                    tgttttaataatagccttaaaatatattttttccttgactctgttttcgtaggtaagccagatttcctagatatatacgttgtcttcattattctgacgtaacggcaaactgtttatttacactgCGGTTTTC-TACGACAAAATTAAGTTTTA-AAATATTTTCTTAGACGTGAAAATGAAAATGTATATGATGACAATTT-GTGGATAAGGTAATAGAT--TACAAAAAGTG-ATTTAGTCCAAGATTTTCTTCAGGG----CATGTGAGAAAGCTGTCACGTGACATGGAAGATATAG----TTT-TCCTCCATGAG-GAAAACCTGCATCTTCTATGAGCAGAAATTGGAGAAtgattcatttacgttattttctcaaatcttaaac


blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         T                    A                                            C  A                  GA       AA  .         C               CATG                   ATG               .      .          AT
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                            T  .                  .        AT  .         A               .                      GTG               .      .          A 
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                            T  .                  .        AG  .         A               .                                               .          G 
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                            T  .                  .        .   .         .                                                                            
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                            .  .                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                         .                    .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                                              .                                                                                                                                                                      
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                                              .                                                                                                                                                                      


blockSeqCons                  :                                                                                                                                                                                                                                                                                                                                                                                                                 
originalCons                  :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGCGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
finalCons                     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGCGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA

Unaligned ( gi|3 ): TATAAGAATCCACCATGAGTATCTGTGTGGGATAGAAATATATTACTGGAGGGGTTGAAATTACATGCAGGGACAAGCTCTGCTGAGTTCACTGCATGTATTTTGATCCAAAGGGTGAGATTTGGATGAACTCTTATTCTTCCCTCCCATTCATCTCAGTCAAATGACAGATATCCGATGATGGCCTTCATCACAAAAATATTCTATTTTTTAAATGCATGTTTAACGCCCAAAATTTCACAGATATTATTATGAAGAAATGGACATTTTAAAGTACATACTGAAAGTATGTACCAGAAATTACACCTGTTTATCACTCTGCATATTGTTTGTTTAAATCATTCACTTCAAATATATTTTGTACTCTGACATAAATATATACGTTGATGTCATTATTCTGACATAACGTCTATCTCTTTTT
Unaligned ( gi|4 ): TTCCTGCAAATAATTCCCAATGCAGAGGGTGAGATTACTCTAACTTCATCCTTGATTATTTTTTTGTCATTCATCTAAGTCAAATGTTGGCCATCATTTCAAAAATATCTTACATTTTAAATGCATGTTTAACACCCAAAATTCAACAGAATATTCATTTTAAAATACCAGGTATTACAGAAATATTTACACCCGTTAAACTTCCAGCACATTGTTTAATAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
Unaligned ( gi|6 ): TTTTAATGCGCGTTTAACGCCAAAAATTTCACATATAGAGATCTATATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTT
Unaligned ( gi|8 ): GACAAGGCTCTATGGAATTTCCTGCATGTTATTTTGACCAAGAGGTGAGCATTTTTTTTATCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGTGTTTAACGTCGAAAATGTCACATAAATTTAGAAAATTGGATAATTTAAAGTACATAC
Unaligned ( gi|9 ): AATATAAGAATCCATTATGAGTATCCGTGTTGGATAGCAATATATCAGACAGAGCCTAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT
Unaligned ( gi|11 ): CGTCAGAATAATGTCATGAATATCAAGAATAGAAGATAAAAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAAGACTCTGCCGAGTTTTCTGTATGTAATTTTGACCCAGAGG
Unaligned ( gi|12 ): TCACCCGAGGGGTCAAAACTATATGCAGGGACGAGGCTTTGTTTTGAGTCAAAGGCTGAGATTTTTCTTTCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|13 ): GTCATACTGTTATATTATAAAAATAAGAACATAAGAATACATAATGAGTATCCATCTCACCCGAGGTATCAAAATGGCATTCAGGGACGAAACTCTGCGGAGTTTCCGGCATATAATTTTGACCCA
Unaligned ( gi|15 ): TAAGTCACTTCGAATATAATTTTACCCTGATATTATTCTTGAAGGTAAGCAAGACATCAAAAATATATACGTTTATGCCATTATTCTGTGATAACGCCTATCTCTTTTT
Unaligned ( gi|16 ): GACCCGTAATGACCATCGTCACAAATAATCAAACTTTTATATTGCGTGTTTAACGTCCAAAATTTCACAGATATATGAAGAAATCGACATTT
Unaligned ( gi|17 ): GATAATGGACGTCATCACGAAAATATGCTACTTTTTAAATGCATATCTAACGCTCAAACTTTCACAGA
Unaligned ( gi|18 ): ACTTTTTAAATGGGTGTTTAACGCCCAGAATTGCGCAGATATGTAAATAAATCGACATTTTAAAGT
Unaligned ( gi|20 ): CTTTTTTAATGCGTGTTTAACGCCCAAAATTTCGCATATATATGAAGAAATGGACAT
Unaligned ( gi|24 ): ATACGTTGACGTCATTTATCTGGCGTAATTTCTATATTTTTTCAT
Unaligned ( gi|25 ): ATACGTGTGCGTCACTATATATTCTGACGAACGGCAAACTCTTTC
Unaligned ( gi|39 ): ACTTTTTAATGCGGTTTAACGCCCAAAATTGCGCATGCATGT
Unaligned ( gi|41 ): ATGAAGAAATAAACAACTTGCTTATGAATGGCAAAAT
Unaligned ( gi|43 ): TTTTAATACGTGTTTAACGCCCAATATTTCGCATA
Unaligned ( gi|44 ): CATTATTCTGACGCAACGCCTATCTCTTTTT
Unaligned ( gi|45 ): CTTTTTAAATGCGTGTTTAACGCCCAAAATT

lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 11                                     2222                                     2222   1          11                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         1   0                1                               0            1  6                  11   0   44  8         5               1111                   888               8888   0          11                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         .   .                .                               .            .  .                  ..   .   ..  .         .               ....                   ...               ....   .          ..                                    
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                         7   9                6                               3            7  7                  00   8   66  0         6               2222                   000               3333   0          22                                    
consensus                     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGCGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
Reference ( family-1490 )     :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGTGAAAATGAAAATATATATGATTACGATTT-GTGGATAAGGAAATAGAT--TACAAAAANTG-ATTTAGTCCAAGATTTTCGTCAGGT----CATGTGAGAAAGCTGTCACGCGACATGTAAGATATAG----TTT-TCCTCCATGAA-GAAAACCCGTATCTTCTATGAGCAGAAATAGGAGAA
gi|1                          :                                                                                                                                                                                                                                                                                                                                                                                                                                AAAACAAAGTATTA-AAATATTTTTATAT-TGTGAAAATAAAAATACATATGATTACGATTT-GTGGACAAAATAATATGT--TAC-ACAATTGTATTTAGTCTAAGATTTTAGACAGGT----CATGTGAGAAAGCTGTCATAC-ACATGTATGGGATAGGAGATTTATCTACCATGGT-GAAAAGCCGTATCTCCTATGAACAGAAATAGGGGAA
gi|10                         : aagtatcaaaagtcatcatgagtatccatgttggttcgaatctcacaagaagctcaaagttacatgaaggtaaacttacctgcatgaatgaactcattatggactttttctcccattcatctcagttaaatgattggccctaggcaacggccgtcatcacaaagatagtttattttttaaatgcatgtttaaagcgcaaactttcacatgggtatgaagaaatcgacattttaatgtaagtctaaactagaaattacccctgtattttgtttgtttagataaatcacttcaaatataattgttacattgaccctgtcattgttggtaagtaagacgtcataaatatatatgttgacatcaatattctgacgtaacatctgtttcttttatattggttgctCGGTTTCC-TACAACAAGATCAAGTTCTT-AAATAGTTTCGTAGACATGAAAATGAAAATATATATGATTACGACTT-GTGAATAAGGAAATATAT--CACAAACAATG-ACTTTGTGTCAGATTATCGTCAGGTCATGCATGTGAGAAAGCTGTCACATGACATGTAAGATAGAG----TTT-TCCTCCATGAATGAAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTGT---TACAACAAAACCAATTTGTA-AAATATTTACGTAATAGTGGAAATAAAAGTATATACGA----GA--T-GCTGATAAAGAATAAGATGATACAAAA---G-TTCTAGTCCAAAATGTTCGT
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGATTGCC-TACAACAAAATTAGGTTTTAAAAATAGTTTATTAGATGTGATAATGAATATAAATA
gi|2                          :                                                                                                                                                                                                                                                                                                                                                                                                                       aC-TACAAAAAAATAAAGTTTTA-AAATATTTTCGT------GAAAACG----------TGATTATGATTT-GTGGATAAGGAAATAGAT--TACAAAAATTG-GTTTAGTCC-AGATTTTTGTCAGGT----CATATGAGAAAGCTGTC
gi|21                         :                                                                                               tttttatccaacatgggtgaactcgtgattgattcttacgttatttctcccattcagctcagtcaaatgacagaccctcataatggccatcatcacaaaaatattttactttttaaatacatgtttaatgcctcaaatttcacatatatatgaagaaattgatattttaaagtacatactaaatataacccagaaattacagcacagagtttgttttattaattcacctcaaatataatttttaaccttaacttgttcttttaggtaggccagacgtaataaatataaatggtgacgtcattgatgCGGTTTCCTTAC-ATAAAATCAAATTTTG-AAATGTTTTTGTAAGCGTATAAATGAAgtacagaaaat
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aT-TCCTCCATGAA-GAAAACCCTTATCTTATATGGGCAGAAACAGAAGAA
gi|23                         :                                                                                                                                                                                                                                                                                                                                                                                                                 cGGTTTCC-TACGAAAAAATCAAGTTTTA-AGATAGTTTCATAGACGTagtg
gi|26                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TACGACAAAATCAAGTTTAA-AAATATTTCCGTAGAC
gi|27                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTTA-AAATATTTTCGTAGACGa
gi|28                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TACGACAAAATCAAGTTTGA-AATTGTTTTCGTAGACG
gi|29                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CAGTTTTC-TACAATAAAATCAAGATTTT-AAATATTTTTGTAG
gi|30                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACACTATCAAGTTTTA-AAATATTTTCCTAGACg
gi|31                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTCC-TTCGACAAAATCAAGTTTTA-AAATATTTTAGTAGACGTa
gi|32                         :                                                                                                                                                                                                                                                                                                                                                                                                                 CGGTTTCC-TATGGCAAAATTAAGTTTTA-AAATATTTTTGTAGAC
gi|33                         :                                                                                                                                                                                                                                                                                                                                                                                                                   aTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTTCTTAGGCGT
gi|34                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCAGTTTCC-TATGACAAAATCAAGTTTTA-AAATTTTTTCCTAGA
gi|35                         :                                                                                                                                                                                                                                                                                                                                                                                                                   GTTTCC-TACAACAAAATCAAGTCGTA-AAATATTTTCt
gi|36                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTTC-TACAACAAAATCAAGTTTAA-AACTGTTCTCGTAGtttagcg
gi|37                         :                                                                                                                                                                                                                                                                                                                                                                                                               taCAGTTTCC-TACAACAAAATCAAGTTTTA-AAATATTTCTGTAG
gi|38                         :                                                                                                                                                                                                                                                                                                                                                                                                                  GGTTTCC-TACGACAAAGTCAAGTTTAA-AAATATTTTCGTAGAg
gi|40                         :                                                                                                                                                                                                                                                                                                                                                                                                                tCGGTTTCC-TA------AATCAAGTTTTA-GAATATTTTCTTAGACGT
gi|42                         :                                                                                                                                                                                                                                                                                                                                                                                                                aCGGTTTCC-TACGACAAAATCAAGTTTTA-AAATGT
gi|46                         :                                                                                                                                                                                                                                                                                                                                                                                                                              ACAAAATCAAGTTTTG-ACATATTTTCATAGaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                     aTCG-TACAACAAAACCAAATTT-A-AAATATTC----AGGTGTAAAAATGAAAATATATATGATTACGATTTAATGGATGATGATGTAG
gi|7                          :                                                                                                                                                                                                                                                                                    tgttttaataatagccttaaaatatattttttccttgactctgttttcgtaggtaagccagatttcctagatatatacgttgtcttcattattctgacgtaacggcaaactgtttatttacactgCGGTTTTC-TACGACAAAATTAAGTTTTA-AAATATTTTCTTAGACGTGAAAATGAAAATGTATATGATGACAATTT-GTGGATAAGGTAATAGAT--TACAAAAAGTG-ATTTAGTCCAAGATTTTCTTCAGGG----CATGTGAGAAAGCTGTCACGTGACATGGAAGATATAG----TTT-TCCTCCATGAG-GAAAACCTGCATCTTCTATGAGCAGAAATTGGAGAAtgattcatttacgttattttctcaaatcttaaac

Unaligned ( gi|3 ): TATAAGAATCCACCATGAGTATCTGTGTGGGATAGAAATATATTACTGGAGGGGTTGAAATTACATGCAGGGACAAGCTCTGCTGAGTTCACTGCATGTATTTTGATCCAAAGGGTGAGATTTGGATGAACTCTTATTCTTCCCTCCCATTCATCTCAGTCAAATGACAGATATCCGATGATGGCCTTCATCACAAAAATATTCTATTTTTTAAATGCATGTTTAACGCCCAAAATTTCACAGATATTATTATGAAGAAATGGACATTTTAAAGTACATACTGAAAGTATGTACCAGAAATTACACCTGTTTATCACTCTGCATATTGTTTGTTTAAATCATTCACTTCAAATATATTTTGTACTCTGACATAAATATATACGTTGATGTCATTATTCTGACATAACGTCTATCTCTTTTT
Unaligned ( gi|4 ): TTCCTGCAAATAATTCCCAATGCAGAGGGTGAGATTACTCTAACTTCATCCTTGATTATTTTTTTGTCATTCATCTAAGTCAAATGTTGGCCATCATTTCAAAAATATCTTACATTTTAAATGCATGTTTAACACCCAAAATTCAACAGAATATTCATTTTAAAATACCAGGTATTACAGAAATATTTACACCCGTTAAACTTCCAGCACATTGTTTAATAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
Unaligned ( gi|6 ): TTTTAATGCGCGTTTAACGCCAAAAATTTCACATATAGAGATCTATATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTT
Unaligned ( gi|8 ): GACAAGGCTCTATGGAATTTCCTGCATGTTATTTTGACCAAGAGGTGAGCATTTTTTTTATCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGTGTTTAACGTCGAAAATGTCACATAAATTTAGAAAATTGGATAATTTAAAGTACATAC
Unaligned ( gi|9 ): AATATAAGAATCCATTATGAGTATCCGTGTTGGATAGCAATATATCAGACAGAGCCTAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACT
Unaligned ( gi|11 ): CGTCAGAATAATGTCATGAATATCAAGAATAGAAGATAAAAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAAGACTCTGCCGAGTTTTCTGTATGTAATTTTGACCCAGAGG
Unaligned ( gi|12 ): TCACCCGAGGGGTCAAAACTATATGCAGGGACGAGGCTTTGTTTTGAGTCAAAGGCTGAGATTTTTCTTTCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|13 ): GTCATACTGTTATATTATAAAAATAAGAACATAAGAATACATAATGAGTATCCATCTCACCCGAGGTATCAAAATGGCATTCAGGGACGAAACTCTGCGGAGTTTCCGGCATATAATTTTGACCCA
Unaligned ( gi|15 ): TAAGTCACTTCGAATATAATTTTACCCTGATATTATTCTTGAAGGTAAGCAAGACATCAAAAATATATACGTTTATGCCATTATTCTGTGATAACGCCTATCTCTTTTT
Unaligned ( gi|16 ): GACCCGTAATGACCATCGTCACAAATAATCAAACTTTTATATTGCGTGTTTAACGTCCAAAATTTCACAGATATATGAAGAAATCGACATTT
Unaligned ( gi|17 ): GATAATGGACGTCATCACGAAAATATGCTACTTTTTAAATGCATATCTAACGCTCAAACTTTCACAGA
Unaligned ( gi|18 ): ACTTTTTAAATGGGTGTTTAACGCCCAGAATTGCGCAGATATGTAAATAAATCGACATTTTAAAGT
Unaligned ( gi|20 ): CTTTTTTAATGCGTGTTTAACGCCCAAAATTTCGCATATATATGAAGAAATGGACAT
Unaligned ( gi|24 ): ATACGTTGACGTCATTTATCTGGCGTAATTTCTATATTTTTTCAT
Unaligned ( gi|25 ): ATACGTGTGCGTCACTATATATTCTGACGAACGGCAAACTCTTTC
Unaligned ( gi|39 ): ACTTTTTAATGCGGTTTAACGCCCAAAATTGCGCATGCATGT
Unaligned ( gi|41 ): ATGAAGAAATAAACAACTTGCTTATGAATGGCAAAAT
Unaligned ( gi|43 ): TTTTAATACGTGTTTAACGCCCAATATTTCGCATA
Unaligned ( gi|44 ): CATTATTCTGACGCAACGCCTATCTCTTTTT
Unaligned ( gi|45 ): CTTTTTAAATGCGTGTTTAACGCCCAAAATT