lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 2222222222222222222222222222222222222222222222222222222222222222 22 111 111111 1 44444 1 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 11111 1 11 333 11 1 3333333333333333333 11111 888888888888 1111 11111111111 222222 2 1 55555555555555555555555555 666666666666666666666666666666666666666666666666666666666666666666666666 111 22222 2222222222222222222222222222 111111 999999999999999999999999999999999999999999999999999999999999999999999999999 111111 1 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 111 222 111111111111 4444444444444444444 22222 111 3333 6666666666666666666 1 222222 3333333
lowQualScore : 888 6666666666666666666666666666666666666666666666666666666666666666 77 3 1 4 88 4 55 555 55 444444 2 4 66 99999 11 3 4 4 6 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 55555 2 5 6 00 6 333 22 6 0 1111111111111111111 77777 555555555555 888 0000 77777777777 5 888888 555 9 66 6 6 2 4 8 5 22222222222222222222222222 66666 7 3 666666666666666666666666666666666666666666666666666666666666666666666666 0 2 3 0 555 5555 00000 33 2 6666666666666666666666666666 888 444444 000000 55 222222222222222222222222222222222222222222222222222222222222222222222222222 3 44 2 3 3 44 555555 6 1 1 1 9 2 7 666 8 2 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 0 222 3 3 222 666666666666 55 5 7777777777777777777 22 77777 0 000 8888 55 55 3 5555555555555555555 77 3 2 1 4 666666 4444444 1
lowQualScore : ... ................................................................ .. . . . .. . .. ... .. ...... . . .. ..... .. . . . . ................................................................................................................. ..... . . . .. . ... .. . . ................... ..... ............ ... .... ........... . ...... ... . .. . . . . . . .......................... ..... . . ........................................................................ . . . . ... .... ..... .. . ............................ ... ...... ...... .. ........................................................................... . .. . . . .. ...... . . . . . . . ... . . ................................................................................................................................................................................................................ . ... . . ... ............ .. . ................... .. ..... . ... .... .. .. . ................... .. . . . . ...... ....... .
lowQualScore : 000 4444444444444444444444444444444444444444444444444444444444444444 77 5 9 4 44 4 66 666 33 111111 8 4 11 88888 99 8 1 2 0 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 55555 5 0 0 00 0 000 00 0 5 2222222222222222222 22222 444444444444 888 6666 66666666666 0 000000 444 3 00 1 6 8 0 7 6 33333333333333333333333333 66666 3 6 666666666666666666666666666666666666666666666666666666666666666666666666 7 5 8 6 000 3333 22222 44 7 0000000000000000000000000000 333 777777 333333 77 555555555555555555555555555555555555555555555555555555555555555555555555555 1 22 2 1 1 22 777777 2 2 9 4 5 3 3 222 0 6 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 4 000 6 6 666 333333333333 55 1 3333333333333333333 77 00000 5 000 2222 00 00 6 8888888888888888888 99 5 5 5 4 666666 9999999 4
consensus : GCTGGACAACTTGGCTCTTGTNGGCAG-T-GCA-------GCNGCATT--------ATC---------ATGC------------CTC-GCAAACCAGTTGCTGGTCTTC-TT-NT-TTC-ATAT---ACCT-GTTTGACT--T-TTTTCA-AGAC--A--GNNTTTTTGTAAANGTTACCAGTAATTGATCGACCATTT--GGTAGGA-TTTGAATGACAC-ACCGC--GAACTG--AAGAATATCGAANNNAGGTTACCTTTTTTGCACTCNACGATNAGTCTTCTGTTGTCTTTTTCGTCTAATGTTTAATTACCNNNNNGACGTTGGGGCTCGANATAAAACACCNATGTCTTGCCACCANTATTAGCAATTCACATATTCGTT--TTTACTACAATTTTTATAC-T-TAC-TCT--AAGC---A----TTTTTTTG-CG---T-TTT-TACACTCTCGTGGCCTTTTGGG-AATCAGTTAA-GAGATGAGGTACCCATCTAGCACA---AATCTTTTTT--AC-CTT---T-AGATGTT---TAGTCA-G-AATTTCGT-G---AAC----------AG------------T--GCCGAC--TA---------TAAG--AG-G----AAGATCTTGCAAGGTGTATC--TAGCAT----CTTN-TTTGATGCAG--TTA-TGTA------CTGCA------G---A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G----------C-----C----------TA-----CC--A--G-------TG-T-GA----G-GA--TCATC-TT-TGATG--TCNA----AT-TTTCCATCTTTAAATTTCTTGTACCACCTGTAAACCGTTGCTCTAGAGACGTT--AGACGACCCATGTACAT--CATCACACAATTCAG--A-T-A--AAAATATA-GCTTTACAAGGTATAT---T-T-----AA--AACGCTACGCGTTTTA-AT-A---TA--ACCC-C-TA----ATTTCAGACTTC-AAAANT-CT-------CC-----TTCA---T--------------AA-T------G--------A--------TA--------CGACCAGTGT--NTA-T-GACTGACCT-TATTTCAA----A-TG--A-ATGT--AACTTCGGTATTGTAT-ACCC--AN----TTNCGATAAAATTTCGTGCA-T-TGTGTAGCTATTGAATA---ACTCTTTAT-TGTG--ATATA--AAC-CGT-TACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTCT-AAAAT-AATT--CCGATTGCCCCTCGTA
Reference ( gi|1 ) : GCTGGACAACTTGACGCTTGTGTGCAG-T-GCA-------GCAGCGTT--------ATC---------ATGC------------CTT-GTAAACCAGTTGCTGGTCTTC-TT-AT-TT--ATAT---ACCT-GTTTGACC--T-TTTCCA-AGAC--ATTTTTTTTTTGTAAAAGTAACCAGTAACTGATTGACCATTATTGATACAAAGTTGAATGACATGACCGGTGGAATTG--AATAATATCGAAAAAAAG-CACCTGTTTGATACTCC-TGATGGGTCTTCTTTTGGCCTTT--------------ATTATCAACCCGACGTTTGGGCTTGAAGTAAGACAGGAATGCTTCGTCACCAATA--AGTAATTCACATATGCATT--TTCACTACAATTTTTATACATGTACGTCTT-AAGC---A----TTTGTTTA-CG---T-TTT-TACATTCCCATAGTCTTTTGGGGAATCCGCTAA-GGGATAAGGTACCCATCTAGCACA---CATTTGTTTT--AC-TTT---TCAGATGTT---TGGTCA-G-AATTGCGT-G---AAC----------A-------------T--GCCAAT--TA---------TAAA--AG-G----AAGATCTTGCAAGGTGTATA--TAGCAT----CTTA-TT-GATGCAG--TTA-TGTA------CAGTA------G---A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G----------C-----C----------TG-----CC--A--G-------TA-T-AC----G-GA--TTATC-TT-TGATG--TCTA----AT-TTTCCATCTTTAAATTTTTTGTATCACCTGTAAAATGTTGCTCTAAAGACATT--AGATGACCAATGAACAT--CATCACACAATTGAGAAAATGAGAAAAATATA-GTTTTACAAGGTTTAT---G-A-----AA--AACGCTATGCATTTTA-AT-T---CA--ACCT-C-TA----ATTTCAGACTTCAAAAAAT-AT-------CT-----TTCA---T--------------AA-T------G--------A--------TA--------CGACCAGTGT--TTA-T-GACTGACCT-AATTTCAA----A-TA--G-ATGT--AACTTCGGTATTGTAT-ACCC--AT----TTTCGTTAAAATTTCGTGCA-T-T-TGTAGCTATTGAATA---ACTCTTCCG-TGTG--ATATA--AAC-CGT-TCCGAA----AACGTC--CAGGTGTAGTTTCTATCGAAACGCGTTCATC--AAAAT-AGTG--CCGATTGCCCCTCGTA
gi|2 : GCTGGGCAATTTGGCTCTTG-----GG-G-ACA-------ACTACATT--------ACC---------ATGCAGGAAGCA----CAT-GCTAACAAGTCGTTT-TCTTT-TT-AT-AT--AGATTCCAACT-GTTTGA-----------------------TATTTTTGTAAATGTTACCAATAATATATCGAGCATTA
gi|3 : GCTAGACAACTTGGTTCTTACGGGCAG-T-T------------GCATT--------ATCTTGAGGCAAATTC------------CTC-GCAAACCAGTTGCTGGTTTTC-TT-TT-TTC-ATTT---ACCT-GTTTGACA--T-TTTTCA-AGAC--A--GAGTTTTTGGAAAAGTTACCAGTAATTGACCGACC-----------------GAATAACACGACCGCTTTATTTT--ATGAATATC-AAGTAAAG-TACCTTTTTTGTACTCCACGA-GAGTCTaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcacatattcgttactacaatttttatacttctgcaatattttctttcgctttttttgtatgctcgtggccttttgggaatcagctaagaaatgaggtacccatctagcgcagatatgtttaccttttgatgataagtaagaattttgtaacaactgccgataagatgccaactatatgaggaagattttgatgcagtaacgaactgcagatatgtttgcagcaatagcagccaacgtggacctaccgctttcaggttcatcgtcgatgtcaaatttgccatctttaaataccttgtcccatctgtaaaccgttgctctggagacatttcatggcccatgtatatcacacaataacgaaaatataattttacaatgtacatgtatatttaaaacgctacacgttttgacattacctattaatttagacttcaaattctccttcacaatgataacaaaatacgatcagtgtacatgactggcctttttcaaatgcatgtaacttcggttttaaatacccaaattgcgataaaatttcgtgcattttgtagctattgaataactcgttagtgtgatgtaaaccgttgcgacattgcaggtataatttttatgaaaacgcgttcgtcttaaaatatccgttttg
gi|21 : GCTGGACAACTTCGCTCTTGTTGGCAGCT-GCA-------TTATCGTTCAGGAAGCAT----------ATGT------------ATC-GCAAACCAGTTGCTGGTTTTC-TT-TT-TTCCATAT---ACCT--TTTAACC--C-TTTTCA-AGAC--A--GGTTCTTTGTAAACGTTACCCGTAATGGATCGACggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgaccttgacctaccagtgtgtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|25 : CTGGACAACTTG--GCTCATGTG--G---GCA-------GCTGCATT--------ATC---------GTGCAGGAGGCACATGCTTGGCAAACAAGCTGCTGTTTTTT-TT-GT-TTTCACAT---AACT-GTTCGATT--T-TTT----AGAC--ACT
gi|4 : AGCTTGACTCTTGTTGGCAG-TTGTATTATCATGCAGGAGA--------AAC---------ATGC------------CTC-GTAAACCAGTTGATGGTCTTC-TT-ATACC--ACAT---ACCTTGTTTGACC--T-TTAACA-AGAC--ATATTTTT---GTAAATGTTACCAGTAATTGATCGGCCATTTTGGGTAAAATTTTGAATGAC-T-ACCGCGGGAACTGAAAAAAATATTG--TGTAGGTTACCTTTTTTGCA---A-TGATTAGTCTTCTGTTGTCTTTTTCGTCTAATGTTTAATTATCATACCGACGTTGGGACTCGAAATAAAACACCAATG
gi|17 : act---------ATAC------------CTC-GCAATTCAGTTGCTGGTCATCTTT-AT-GC--ATTT---ACCT-ATTTGACTGGTATTAACACAGAA--A------TTTTGTACAAGTTACCAGTAATTGATCGAGCATTTGTGGTAGGAATTTGAATGACA---------GAACTG--AAGAATATtattaaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|30 : attcagaaattatttattatcttgcagaaggcatAGTTGTTGATCTTT-TTTCT-TC--ATAT---ATAC-ATTTGACT--T-TTTTCA-AGAT--ATAACTTTT--GTAACGCTA-CCAGTAATTGATCGACCAgagtagagtatgtttttggcattactcaaatgtttggcaataatttatcttctttgacctttttt
gi|28 : GTTGCTAGTCTTC-TT-TT-TTC-ATCT---ACCT-ATTTCATT--T-TTTTCA-AGAC--A--GAGTTTTTGTGAAAGTTACCAGCGATTGATCGACCAT
gi|29 : cgcaaaatGTTATTGATCTTT-AT-AT-TTC-ATATTTCACTT-GTTTGATT--A-TTTTCA-AGACCGACTTTGT----GTAAACGTTACCAGTAATT
gi|24 : TTGTAAAACTTACCAGTAACAGATCGACCATTcaaacgacag
gi|9 : TCATCTATTG---TTT--------------ATTACCTACAAGAAATTGGAGTTCAATATAAAACACCCATGTCTTGCCACCACTATTAGT--------------TT--TTTACTATAACTTT---AC---TACTTCTT-AAGC---AGTTTTTTCTTTG-CA---T-TTTGTAC--TCTTATGGCCTTTTGAG-AATTAGTTAT-GCGATGCGGTACCCGTCTGGCACA---AATCATTCTT--GC-CTT---T-AAATGTT---TAGTCA-G-GATTTTGT-G---GAC----------AGCCTGTA------T--GCCAAC--TA---------CATG--AG-A----AAGATCTTGCAATATGTTTC--TAGCAT----CTTC-TTTGATGCAGGGCTG-TTTG------CAGTA------G------------------T---TA-CAG------C---CAACTTAG----------G----------T-----C----------TA-----CC--A--G-------TG-T-GA----G-GA--TCATC-TC-TGATG--TC--------------------AAAATTCTTGTACCATCTGAAAACCTTTGCTCTCAACACATT--AGACGACCTATG---TT--CATCACACAAtggaataagatcagaaccactcgaattaaaaaagcgtgtaaagaactttctggtactcgttgaaagcttagcaatacttggtatttcttgtcct
gi|13 : tttGTCACCAGTA--AGCAATTCAATTATCCGTT--TTAACTACAGTTTTTATACTTTTA-------AAGC---A----TTTg
gi|2 : ATTCACATATTCGTT-----ACTACAATTTTTATACTTCTGC-------AAT---A----TTTTCTTT-CGCTTT-TTT-TGTATGCTCGTGGCCTTTTGGG-AATCAGCTAA-GAAATGAGGTACCCATCTAGCGCA---GATATGTTTA--CC-TTT---T--GATGAT---AAGTAA-G-AATTTTGT-----AAC----------AAC-----------T--GCCGAT---------------------------AAGAT---GCCAACTATATG--AGGAAG----ATT--TT-GATGCAG--TAA-CGAA------CTGCA------G---A------TA---TGTT---TG-CAG------CAA-TAGC---A----------G----------C-----CAACGTGGACCTA-----CC--G--C-------TT-T-CA----G-GT--TCATC-GT-CGATG--TCAA----AT-TTGCCATCTTTAAATACCTTGTCCCATCTGTAAACCGTTGCTCTGGAGACATT--TCATGGCCCATG--TAT---ATCACACAAT------AACG---AAAATATA-ATTTTACAATGTACAT---GTATATTTAA--AACGCTACACGTTTTG-A------CATTACCTAT-TA----ATTT-AGACTTC--AAATT-CT-------CC-----TTCA---C--------------AA-T------GATAACAAAA--------TA--------CGATCAGTGT--ACA-T-GACTGGCCT--TTTTCAA----A-TG--C-ATGT--AACTTCGGTTTTAAAT-ACCCA-AA----TTGCGATAAAATTTCGTGCATT-T-TGTAGCTATTGAATA---ACTCGTTAG-TGTG--ATGTA--AAC-CGT-TGCGAC----ATTG----CAGGTATAATTTTTATGAAAACGCGTTCGTCTTAAAAT-Atgtactctcgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagatctagcatcttctttgatgcagtttgcaacagtaataaccgacatggtactactcctactagagtgaggatcatgtttgatgtcaaatattccat
gi|3 : gctgggcaatttggctcttggggacaactacattaccatgcaggaagcacatgctaacaagtcgttttctttttatatagattccaactgtttgatatttttgtaaatgttaccaataatatatcgagcattaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCACATATTTGTTGTTTTATT-TAATTTTTATAC-------TTTTGAAGC---A----GTTTTTTC-CC---T-TTG-TAC--TCACGTGGCCTTTTGGG-AATCAGTTAA-GT--TAAGGTACCCATCCATCACA---CATCTTTTTTTAAC-TTT-----AGATGTT---TAGTCA-GGAATT-CTT-G---AAC----------AGCTACCTATGAGAT--GTCAAC--AA---------TAGA--AG-A----AAGATCGTGCAACGTATATA--TAGCAT----CTTT-TT-TATACAG--TTA-TGTA------CTGTA------G---A------TA---TGTT---TG-CAG------TAG-TAAT---A----------G----------C-----tccgttttg
gi|14 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntccTT--TTTATTACAATGTTTATAC---T---TCTA-AAGCTGTA----TTT--TTA-GGAG-T-TTTGTAC-TTAC--TAGGCCGTTTGTTAATCAATTAA-GAGATGAGGTAGACTTTTAGCAGA---AATCATTTTT--AC-CTT---T-ACATGTT---TAGTCA-A-GATTTCGT-G---AAC----------A-------------tgaccttgacctaccagtgtgtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|5 : catgttcgtACAACAATGTTTATA--TGTCTGT-----AGC---A----TGTTTTGG-CG---T-TTT-TA-GCTCTCGTGGT-TTTAGTGGAATCAGTTAA-GAGATGAGGTACCAATCTAGCA-------TCTGT----------------AGATGTC---TATTCA-G-AATTTCGT-G---AAT----------A-------------TCTGCCAAT--GAGATGCCAACTAAATGAG-A----AAGATCTTGCAAGGTTTATC--TAGCAT----CTTC-TTTGATGTAG--TCA-TGTA------CTGCA------G---T------TA---TGTT---TC-AAG------CAA-AAAC---A----------A----------C-----CGACTTTAGCGTA-----CC--A--G-------TG-T-GA----G-GA--ATATC-TT-TGATG--TAAA----AT-TGTCCATCTTTAAATTTCGTGTGTCATCCGTAAATTGTTGCTCTATAGACATA--AGAT---------ACATTACATCATAC-ATTGA-------AG-AAAATATA-GCTTTACAAGA--TAT---G------------------------TTA-AT-A---TA--ACCT-C-TA----ATTTCAGACTT--AACGTT-TT-------CC-----TTCA---T--------------GA-T------G--------ATAACAAAGTA--------CGACCAGTGT--ATA-T-GACTAACCT-AATTTCAA----A-TG--A-ATGT--AACTTCGGTATTATAT-CCCC--AA----TTGCGATAAAAT---GT-CA-T-TATGTAGCTATTAAAAA---ACTCTTTAC-TGTG--AAATA--AAT-CGC-TACAAATTTGAATG-----AAG---AGTTTCTATGGAATCGCGTTCGTC--gctgcatctttgatgcagtaatgttctgcaaatatgttgacatcaataacagccgtactggacctaccagtgtgatgatcatctttgatgactcaaatgtttccgatttgtttccccccttatattatttattgtttttttaaacg
gi|4 : aACTTCTG-AAAC---A----CTCGTT-G-CG---T-TTT--ATACTTTCGTGGCCTTTTGGG-AATCATTTGA-GAGATGAAGTACCTATCAAGCACA---AATCTTATTT--AC-CTT----CAGATGTT---TAGTGA-A-AA--GC----------------------------------T--GCCGATAAGA---------TAAA--AG-------AGATCTCTCAAGGTGAACC--TAACAT----CTTC-TTTGATGCAA--CCA-TGTA------CTGCA------G---A------TA---TGTT---TG-CAG------TAG-TAAC---A----------G----------C-----C----------TA-----CT--AAGG-------CT-T-ACCAGCGCGA--TAATC-TT-TAATG--TCAA----AT-TTTCCATCTTTAACTTTCTTGTACCATCTATAAATTGTTGCTCAAGAGACATT--AGACGGCCCATG---TT--CATCACATAATGCAG----TAAG-----TATA-GTTTTAGAAAGTATAT---T-T-----AT--ATTGCCACGCGTTTTA-A-------A--A----------------CAGACTTC---AAAT--T-------CTAC---TTCA---T--------------AA-C------G--------A--------TA--------
gi|6 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaAGC---A----TATCTTTGGCG---T-TTT--GTATTCTCGT-GACCTTTAGGTAATCAGCTAA-GTGATGAGGTACCTATCTAGAACA---------TTTTA-AA-TAT---TTAGATGTT---AAGTCA-A-AATTTCGT-GAAAAACTGTCGATAAGA-------------T--GCCAAC--TA---------TATG--AG-G----AAGATCTT-------------------C----CTTA-----ATGTCG--ATA-TGTA------CTGCA------G---AT-----TATTTTGTT---TG-CAG------CAacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|12 : ttgcTTTA-TG---CGTTT-TGTACTCCGGTGGCCTCTTAAG-AATC-ATTACCGAGCTGAGGTACCCATCGAGCACA---AACCTTTTAT--AC-CTT---T-AGCGGTT---TAGTCA-G-GATTTCGTTGTC-AAT----------AGA-----------T--ACTGAC--TA---------AAAC--AG-A----AAGTTTTTGTAAGGTGTATC--TAGCATAATCTTTG-TT-GATG-----TTA-TATA------CTGTATAAGT-GTTTA------TAAG-TGTT---TG-AAG------AAG-TAAC---AATAGACTTAGG----------C-----G----------TT-----CC--A--A-------TG-A-AA----G-GA--CTATC-TT-TGATT--TATT----TT-TTTCCGTCTTTAAATGTTTTTTACCATCTGTAAACCGTTGCTCTAGCGAAATT---GACGACCGATGTA-----CATCACACAATTCAG--AGT-------ATATA-ACTTTACAAGGTATAT---C-T-----AA--AAtttttcatctttcaattcttgtaccacctgttaatcgttgctagagacattagacgaactgtgttaatcacaagaaaatgtattatatacaaggtctatttaaaacgctacacgtttagatatactttcttatttcatttcagacttcaaattcccctcattaataataacaaccaataacaagaccagtgtatatgactgacagtatatcaaataaatgtaacttctgttttgtatgtatatcacatggcgataaaagtttgaatatcttgtaggtattgaataattctttattataatataaaccgttacgaaattg
gi|16 : aatacttcagaagcTCCCATTGT-TATCAGTTAATCAGTTAA-GAACTTAGGTGCCAATCTAGCACAAATCATTTGT-----AC-CTT---T-AGATGTT---TAGTCGCA-AATAGC----------------------------------T--GCCGAT--------------AAG--AT-GCC--AAGGTATTGCAAGGTGTATC--TAGCAC----CTTATTT-GATGCAG--TTA-TGTA------CTGCA------G---ATACTAGTA---TGTT---TG-CAG------
gi|7 : tctttggccttgtgttgATCTGTTAA-AAAATGGGGTAGACGTCTTGCGCA---AACTTAATTT--ACGCCTAAATTAGAGGTCAAATGTTCATG-AGCTGC-T-G---ACA----------A-------------T--GG-AAC--TA---------TAAG--AG-CTTTTAAT-TCTTTAAATGTGAATC--TTGCAT----CTTT-TT----------TTA-T--------------------------------A---TGTT---TT-CAGA-----CA--TGAC---A----------G----------C----------------TG-----AC----------------T-TT----G-GC--TTCTCATTATGACG--GCCA----AT-TTTCCATTATTAACATATTTATGCCACCCGTAAAATGTGACCTTAGAAATGTTTAAGA--ACCCATG--CA---CATGACACAATT---------ACAAAAATATAGGTGTTA-AAAGTATAT---T-T-----AA--AATGCTACGCA-TTTA-AT-A---TA--ACTC-T-TA----ATGTCGAGCTTCaattatttgcatgtaaaccgtttctttatagacattagacgtcccatgtacataacatatttcagaa
gi|31 : tgagatGGTTTCCATCTAGCACA---AATCT----------TTT---TCATATGTT---TATTCA-G-GATTTTGT-G---AAC----------AGC-----------T--GCTGAT--tgccttcatttccacagtaaaactatatttcagtaaaatgacgtatatcctgtagaaacaagaccactctttattgacatgtaaactgtattttaaaaaaagtacatagtttctataggagtgcatatgtc
gi|10 : atgcGT-G---AA-----------A-------------T--GCCAGC--TA---------TACG--AG-C----TAATTCATTCACTGTGTAGC--TAGCAT----CTTC-TTTGATGCAA--TTG-TGTG------TAGAT------G---A------TA---TGTT---TT-CAG------AAA-TGAA---A----------G----------CTGACTT----------TGGCTTCCC--A--G-------AA-TGAC----G-G---CCATC-AT-TGAAG--TCCA----AT-TTTCCACGATTAACATTTTTATGCCACCTGT-AAATGT--------AAATGTT--TAAGGACCCATGTAC----C-TGACACAATTCAG---------AAAATATA-GGTTTGAAAGGTATAT---T-T-----AA--AACGCTACGCATTTTT-AT-A---TA--ACTC-A-TT----ATTTCAAGCTTC---GAAT-CTGCCTTCACT-----TTCA---C--------------AG-TAA----A--------A--------TA--------TGACCAGTG----TACT-CACTGACCG-CATTTCAA----A-AG--A-ATGT--Aaagatgcctt
gi|13 : gcgccaacattatttacgccttaatgagtgatcaccatctcataaactgctgccgAAA--AGAG----AAGA----G-AAGAAG-ATC--TAGCAT----CTTC-TTTGATGCAG--TT--TGCAA-----CAGTAATAACCG---A------CA---TG----------G------TAC-TACT-------------------------C-----C----------TA-----CT--A--G-------AG-T-GA----G-GA--TCATG-TT-TGATG--TCAA----AT-ATTCCAT
gi|6 : gtcaccagtaagcaattcaattatccgttttaactacagtttttatacttttaaagcattttgtactctcgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaA--AG-G----AAGATCTTCC---TCATATAGTTGGCAT----CTTA-TC-GA--CAG--TT
gi|23 : ttgcagcatatctttggcgttttgtattctcgtgacctttaggtaatcagctaagtgatgaggtacctatctagaacattttaaatatttagatgttaagtcaaaatttcgtgaaaTATC--TAGCAA----ATAA-TTTGATGTAA--TTG-TTCA------CAGCT------G---A------AA---GGTT---TT-CAGGAAAGACAGATGAC---GTTG-------G----------T-----C----------TC-----CT--A--G-------AA-T-GA----T-GA--TCATC-TT-TGATG--TACA----AT-TTTCCAaatgtcgatatgtactgcagattattttgtttgcagcatttttcatctttcaattcttgtaccacctgttaatcgttgctagagacattagacgaactgtgttaatcacaagaaaatgtattatatacaaggtctatttaaaacgctacacgtttagatatactttcttatttcatttcagacttcaaattcccctcattaataataacaaccaataacaagaccagtgtatatgactgacagtatatcaaataaatgtaacttctgttttgtatgtatatcacatggcgataaaagtttgaatatcttgtaggtattgaataattctttattataatataaaccgttacgaaattg
gi|8 : cttattacttctttattATT--TAGCAT----AT-G-TT-TACGCTG--TTA-TGTA------CTTCA------G---A------TA---CGTTATATGATAG------CAG-CAAC---ACCCGACTTGAG----------C-----C----------TA-----CC--A--G-------TG-T-AA----G-GA--TCATT-TT-TTATG--TC-A----ATATTTCCATCTTTAAATTTCTTGTACCACCTGTTTACCGTTGCTTTAGAGGCATT--AGACGATCAATGTGCAT---AGTACACAATT-----------AAAAATATG-GCTTTAAAAGGTCTAT---T-A-----CA--AACGCCACGCCTTTTC-ATAT-------ACTT-C-GA----ATTTCA-ACTT--GAAAAT--T-------CTC----TTCT---T--------------AA-TTATATAGCAAC----A--------TA--------CAACCAGTGT--TTA-T-AACTGACTT--GTTTCAA-------A--GTATGT--AGCTTCAGTATAGTAT-ATCC--A------------AGTAT---ATACA-C-TGTGTAGCTATTGAATA---ACTGTTTAT-TGTG--ATATA--AAT-CAT----GGA----TATATTG-CTGGTATCGTTACCATGGAAACGCGctatcatttttat
gi|11 : GCAT----CTTCCTT-GATGCGG--TGACTTTAATACTGCAGTA----------A------TA---GAT-----A-CAG------CCG-TGAT---T----------G----------C-----C-----------G-----CCCAA--GACATAACTG-T-AC----G-AAGCTCGTC-TT-TCGTG--TCCA----TT-TCTTTATCATTAAATTTCTCACATCACCAATAAACTGTAGCCATAGGCGCGTC--TGAAGGCCCATAAACAG--CA---CAAAGTTCAGA---------AAACAT-------------CTTA-------------A--CACG----GCAT---A-AT-A---TA--AACC-C-GA----ATTTCAGA-TTCAAA---TCGT-------CC-----CTCA---T--------------AAGT------GTAGCAAA-A--------TA--------TTACCAGTGT--ATA-C-GACTGACCG-TATTTC-A----A-TG--C-ATGC--AATGTTGGTATTATGTGACTG--AA----TACCACCAAATGTTCGTGCA-A-T-GTTAGATAATCAATAC--ACCTTTAC--TGCA--ATATA--ACCACGT-TACGTA----Aattgtc
gi|14 : cGCAT----CTT---T-GATGCAG--TAA-TGTT------CTGCA------A---A------TA---TGTT---GA-CAT------CAA-TAAC---A----------GCCGTACTGGAC-----C----------TA-----CC--A--G-------TG-T-GA----T-GA--TCATC-TT-TGATGACTCAA----ATGTTTCC
gi|6 : catgttcgttttttattacaatgtttatacttctaaagctgtatttttaggagttttgtacttactaggccgtttgttaatcaattaagagatgaggtagacttttagcagaaatcatttttacctttacatgtttagtcaagatttcgtgaacagct--G-------TACT-GC----A-GA--TTATT-TT-----G--TTTGCAGCAT-TTTTCATCTTTCAATTCTT-GTACCACCTGTTAATCGTTGCT--AGAGACATT--AGACGAACTGTGT---T--AATCACA------AGAAAATGT----ATTATA-----TACAAGGTCTAT---T-T-----AA--AACGCTACACGTTTAG-AT-A---TA--CTTT-CTTATTTCATTTCAGACTTC---AAAT-TC-------CC-----CTCA---TTAATAATAACAACCAA-T------A--------A--------CA--------AGACCAGTGT--ATA-T-GACTGACAG-TATATCAA----A-TA--A-ATGT--AACTTCTGTTTTGTAT-GTAT--ATCACATGGCGATAAAAGTTTGAATA-TCT-TGTAGGTATTGAATA---ATTCTTTAT-TATA--ATATA--AAC-CGT-TACGAA----Agatttgtttccccccttatattatttattgtttttttaaacg
gi|16 : ttgcagcatatctttggcgttttgtattctcgtgacctttaggtaatcagctaagtgatgaggtacctatctagaacattttaaatatttagatgttaagtcaaaatttcgtgaaaaactgtcgataagatgccaactatatgaggaagatcttccttaatgtcgatatAATTATTTGCAT-----GTAAACCGTTTCTTTATAGACATT--AGACGTCCCATGTACAT---A--ACATATTTCAGAAttg
gi|3 : tctttggccttgtgttgtcccattgttatcagttaatcagttaagaacttaggtgccaatctagcacaaatcatttgtacctttagatgtttagtcgcaaatagctgccgataagatgccaaggtattgcaaggtgtatctagcaccttatttgatgcagttatgtactgcagatactagtatgtttgcagTGTCAAATTTTGCTCCAGAGACACT--ACACGACCCTCGAGCAT--CA---CACAATTCAGAAA-TGA--------TA-GCTTTACAGG--TTAT--------------------------TTTTA-A-------A--ACAC-C-TC----ACTTC----CTCAAATATT-CT-------CC-----TTCA---A--------------AA-T------G--------A--------TAACAAACTTCGCTCTGTGT--GTA-T-GACTTACCT-TTTGTCAA----AATG--A-ATGT--AACTTCGGTATTGTGT-ACCA--AA----ATTCGATAAAATTTCATGAA-T-TGTGTGGCTATTGAATA---ACCTTTTAT-TGTG--AATTA--AAT-CGT-TACGG--------GTTTGCAGATAGAGTTTCAATGAAAACGCGTT
gi|22 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgaccttgacctaccagtgAGAAAAAGA---ATTTTACACGGTATATTTTA-A-----AAGCAACGCT-T---TTTTATAT-TATATA--ATTC-C-TA----ATTTCAAGCTTC-AAATCT-AT-------CTTCATCTTCAGAGT--------------AA--------A--------A--------TA--------TGGCCAGTGT--TC--T-TACTGACCA-TATTTGAA----A-TG--A-ATt
gi|18 : c--AACGCTATGCATTTTG-GT-A---TA--ATCT-C-TA----ATTTCCGATTTTAAAT--T-CT-------CC-----TTTA---T--------------TA-T------A--------A------------------CAAC-A-------TA-TCGAC-GACCT-TGTTCCAA----A-TG--A-ATGC--AGCATCGGTATTGTTT-A-CT--ATA---TTTCGGTAGAAGTGCGTGCATT-T-TGTAGCTGTTCAATA---GCTCTTTTT-TATG--ATTTA--AAC-AGT-ATCG------AACTTG--CAGGTATAGTTTCTATGGAACCGCa
gi|4 : ttacTTTAGAAAGT-AT-------AT-----TT-A---T--------------AT-T------G--------C--------CA--------CG--C-GT-T--TTA-A-AACAGACTTCAAATTCTACTTCA-TAACG-ATAACAAACTTCGATTTTGTAT-ATT---ATGA--TTGCGATAAAGTTTCGTGCA-G-CGTGTAGCCATTGAAAA---ACTCTTTAT-TTTG--TTATA--AAC-CGT-T---AA----ATTGTG--CAGGTATAGTTTTCATGGAAGCGCATTTGCCT-AAAAT-ATTT--CCGATTGCCTCTCGTAaat
gi|15 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagtT-----TTCA---C--------------AG-T------A--------AAA------TA--------TGGCCAGTGTACTCA-T-AAATCGCTT----TTCAA----A-TA--A-ATGT--AAATGTGGT-CCGAAT-GCACGGA-----TTTCAAAAAAGTTACGTTCA-TCT-CGTA--TATC-AACAGCCACTCTT--GTTTTGGCATGTA--GAT-CGCGTTTAAA----AACA-----ATGTAAAGTATCGATAGGAGCGCATTTATCT-AAAAA-AATGTTCCGTTTGCCTCTTGTAcc
gi|26 : aacaccacgtggcattattgtaatataaatcctaatttttagcttgaatctgccttcatTCGTGCA-C-TGTGTAGCTATTGAATA---GCTGTTTAT-TGTG--CTATA--AAT-CTT-TAC--A----AATTTA--CAGGTAAAGTTGCCATGTTAGCACTTTTGTC--TAAATGAAT---TCGATTGCCCt
gi|27 : aGCA-T-TGTGTAACTATTGGATA---ATTATTTAT-TATT--ATATATAAAA-TGT-TACGAA--------TCTGCAGGTATAGTTTCCA-CG------GCT-------AAATAAATT--CCGATTGCCGCTTGat
gi|33 : GTATAGTTTCCATGGGAGCGTGTGTGTCT-AAAAC-CTTT--CCGATTGCCCCTCGCA
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|19 ): TTAATAAACCGTGTCCCAAAACAGTTCAGTAAATATATGTTAAAGGACATGTCTGAAACCCTGAGCATCTTTTATATAAACCCGAATTTCAGATTGCAAGTTTCTCATCATTATAGCAAAGTGGTATCAGTGTTTTTTACTGATTGTATTCCAAATGAACAACTCTAGTATTTTCTGAACAATTCCCAC
Unaligned ( gi|20 ): TCATTTTTATATAACTCTTAATTTCAAGATACACTTCTGCTTTCATTTTCACACTAAGTCCAGTAAAACGAATGTAGATCCAGTCCGAATTCATACACGAATTTTAATACAAATACGTGAATCTTGTAGATAAATTTCCATATATACCACTTTTAAAATAAATGT
Unaligned ( gi|32 ): TGCTGGACAAGTTGGCTGTAATTAGCAGTTGCAGTATCATGCATTCGGCGTACGCCTCGCAAACGAGTTGC
Alignments
lowQualScore : 999999999999999999999999999999999999999999999999999999999999999999999 111 6666666666666666666666666666666666666 11 1111111 222 44444444444444444 111 1 11 33 111111 4444444 111111 333333 7777777777777777777777777777777777 11111111 11111 111111111111 99999999999999999999999999999999999999999999999999 111111111111111 22222 3333333333 1111111111 222 77777777777777777777777777777777777777777777777777777777777777 11111 1111 4444444444444444 111
lowQualScore : 33 444444444444444444444444444444444444444444444444444444444444444444444 0 55 4 777 88 4 111 55 1 2222222222222222222222222222222222222 11 1 1111111 555 3 88888888888888888 44 777 5 77 888888888888888 0 55555 1 1 3 0 1 00 88 1 000000 555 8888888 9999 000000 0 777 000000 1 55 3 3 3 2 33 3 555 22 3 3 999 44 9999999999999999999999999999999999 66666666 2 77777 1 1 3 444 5 0 5555 444 444444444444 777 444 2 777777 2 88888888888888888888888888888888888888888888888888 2 444444444444444 555 44 7 5 0 7 1 3 6666 3 1 2 555 1 0 33333 33 66 1111111111 3 888 3 555 1 3 77777 0 1 8888888888 99999 5555 1 6666 2 444 3 9999999 44 11111111111111111111111111111111111111111111111111111111111111 44 888 3 555 3 2 8888 4 22222 4 444 4 0 888 3 44 3 1111 3333333333333333 0 1 1 2 4 4 555
lowQualScore : .. ..................................................................... . .. . ... .. . ... .. . ..................................... .. . ....... ... . ................. .. ... . .. ............... . ..... . . . . . .. .. . ...... ... ....... .... ...... . ... ...... . .. . . . . .. . ... .. . . ... .. .................................. ........ . ..... . . . ... . . .... ... ............ ... ... . ...... . .................................................. . ............... ... .. . . . . . . .... . . . ... . . ..... .. .. .......... . ... . ... . . ..... . . .......... ..... .... . .... . ... . ....... .. .............................................................. .. ... . ... . . .... . ..... . ... . . ... . .. . .... ................ . . . . . . ...
lowQualScore : 11 777777777777777777777777777777777777777777777777777777777777777777777 1 00 0 000 88 9 888 55 0 7777777777777777777777777777777777777 00 4 2222222 000 0 22222222222222222 22 555 0 33 999999999999999 7 00000 0 0 7 7 0 77 00 5 999999 999 0000000 4444 222222 6 000 555555 5 55 6 6 6 3 88 3 888 22 3 1 666 22 1111111111111111111111111111111111 77777777 9 66666 5 4 6 444 2 6 3333 444 888888888888 888 444 5 222222 9 88888888888888888888888888888888888888888888888888 6 444444444444444 444 22 0 7 3 3 0 3 5555 3 4 3 000 4 2 33333 22 55 4444444444 1 222 1 444 5 1 77777 1 2 2222222222 11111 4444 4 1111 9 222 1 6666666 22 66666666666666666666666666666666666666666666666666666666666666 66 888 3 666 3 5 5555 0 77777 5 888 7 2 555 1 22 1 9999 1111111111111111 8 0 6 1 0 0 444
consensus : GCTGGACAACTTGGCTCTTGTNGGCAGT-GCAGCT----G-CATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTGGAATTG--AAGAATATCGAGTAAAGGCTACCTTTTTNGC---ACTCCA--------CGATGA---GTCTTCT-TTG-NCTTTTTCGTCTA-TGTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAATTCACATATTCGTT--TTT-ACTACAATTTTTATAC-T-T-C-TNT-AA----GCA----T-TTTTTTGCG---TTTT-TGT--ACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-ACCTTT-AGATGTTTAG---TCAGGAT-TTCG-TG---A--AC--------A------------GC-----------TGCCGAC--------TATANGAGG----AAGATCTTGCAAGGTGTATCTAGC---ATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TACCA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGC-G------T-TTTA----ATATAACC--C-CTA----ATTTCAGACTTC-AAA--TTC-T-C-----CT--TCA---------T--------------AA-T------G--------A--------TA--------CG--ACCAGTGT--NTAT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANAN--TTCCGATTGCCCCTCGTA
Reference ( family-1287 ) : GCTGGACAACTTGGCTCTTGTNGGCAGT-GCAGCN----G-CATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-NTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGNNTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-GG-A-TTTGAATGACAC-ACCGC--GAACTG--AAGAATATCGAANNNAGGTTACCTTTTTTGC---ACTCNA--------CGATNA---GTCTTCTGTTG-TCTTTTTCGTCTAATGTTTAATTACCNNNNNGACGTTGGGGCTCGANATAAAACACCNATGTCTTGCCACCANTATTAGCAATTCACATATTCGTT--TTT-ACTACAATTTTTATAC-T-TAC-TCT-AA----GCA----T-TTTTTTGCG---TTTT-TAC--ACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-ACCTTT-AGATGTTTAG---TCAGAAT-TTCG-TG---A--AC--------A------------G------------TGCCGAC--------TATAAGAGG----AAGATCTTGCAAGGTGTATCTAGC---ATCTTNTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TACCA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACGTT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGC-G------T-TTTA----ATATAACC--C-CTA----ATTTCAGACTTC-AAA-ANTC-T-C-----CT--TCA---------T--------------AA-T------G--------A--------TA--------CG--ACCAGTGT--NTAT-GACTGACCTTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-ANTTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAATAA--TTCCGATTGCCCCTCGTA
gi|1 : GCTGGACAACTTGACGCTTGTGTGCAGT-GCAGCA----G-CGTT----AT-------------C-------------ATGC-------------CTTGTAAACCAGTTGCTGGTCTTCTT-ATTT--ATAT---ACCT-GTTTGACCTTTTCCAAGACATTTTTTTTTTGTAAAAGTAACCAGTAACTGATTGACCATTATT--GA--TACAA-A-GTTGAATGACATGACCGGTGGAATTG--AATAATATCGAAAAAAAGC-ACCTGTTTGAT---ACTCC---------TGATGG---GTCTTCTTTTG-GCCTTT--------------ATTATCAACCCGACGTTTGGGCTTGAAGTAAGACAGGAATGCTTCGTCACCAATA--AGTAATTCACATATGCATT--TTC-ACTACAATTTTTATACATGTACGTCTTAA----GCA----T-TTGTTTACG---TTTT-TAC--ATTCCCATAGTCTTTTGG--GGA-ATCCGCTAA-GGGATAAGGTACCCATCTAGCACACATTTGTTTT-ACTTTTCAGATGTTTGG---TCAGAAT-TGCG-TG---A--AC--------A-------------------------TGCCAAT--------TATAAAAGG----AAGATCTTGCAAGGTGTATATAGC---ATCTTATT-GATGCAGTTAT----GTACAGT---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TGCCA----------G----TATACG---GATTATCTTTGATG--TCTAAT-TTTCCATCTTTAA-ATTTTTTGTATC-ACC----TGTAAAATGTTGCTCTAAAGACATT--AGATGACCAATGAACATCATCACACAATTGAGAAAA-TGAGAAAAAT-ATAGTT-T---TACAA-G-----GTTTATGAAAAACGCTATGC-A------T-TTTA----ATTCAACC--T-CTA----ATTTCAGACTTCAAAA-AATA-T-C-----TT--TCA---------T--------------AA-T------G--------A--------TA--------CG--ACCAGTGT--TTAT-GACTGACCTAATTTCAAA-TAGATGTAACTTCGGTATTGTAT----AC-C-C-ATTTTCGTTAAAAT-TTCGTGCATT-TGTAGCTATTGAATA---ACTCTT-CCGTGT--GATATAAAC-CG----TTCCGAA----AACGTC--CAGGTGTAGTTTCTATCGAAACGCGTTCATC--AAAATAG--TGCCGATTGCCCCTCGTA
gi|10 : G-TG---A--A----------------------A------------TGCCAGC--------TATACGAGC----TAATTCATTCACTGTGTAGCTAGC---ATCTTCTTTGATGCAATTGT----GTGTAGA---TG-----A------TA---TGTT---TT-CAG------AAA-TGAA---AGCTGACTTTGG-------------C----------T----------TCCCA----------G----AATGAC---GGCCATCATTGAAG--TCCAAT-TTTCCACGATTAACATTT-TTATGCC-ACC----TGTAAA-TGT--------AAATGTT--TAAGGACCCATGTAC--C-TGACACAATTCAG----------AAAAT-ATAGGT-T---TGAAA-G-----GTATATTTAAAACGCTACGC-A------T-TTTT----ATATAACT--C-ATT----ATTTCAAGCTTC-GAA---TC-TGC-----CT--TCACTTTCACAGT--------------AA--------A--------A--------TA--------TG--ACCAGTGT--AC-T-CACTGACCGCATTTCAAA-AGAATGTA
gi|11 : gcgccaacattatttacgccttaatgagtgatcaccatctcataaactgctgccgGC---ATCTTCCTTGATGCGGTGACTTTAATACTGC---AG-----T------AA---TAGA---TA-CAG------CCG-TGAT---T----------G-------------C----------C----------GCCCAAGACATAACTG----TACGAA---GCTCGTCTTTCGTG--TCCATT-TCTTTATCATTAA-ATTTCTCACATC-ACC----AATAAACTGTAGCCATAGGCGCGTC--TGAAGGCCCATAAACAGCA---CAAAGTTCAG---A-------AAAC-AT--CT-T---AACAC-G-----GCATA---------------------------------ATATAAAC--C-CGA----ATTTCAGA-TTC-AAA---TCGT-C-----CC--TCA---------T--------------AAGT------GTAGCAAA-A--------TA--------TT--ACCAGTGT--ATAC-GACTGACCGTATTTC-AA-TGCATGCAATGTTGGTATTATGT----GA-C-T-GAATACCACCAAATGTTCGTGCAATGT-TAGATAATCAATAC--AC-CTT-TACTGC--AATATAACCACG----TTACGTA----A
gi|12 : c-AA----GC--------TTTATGCG---TTTT--GT--ACTCCGGTGGCCTCTTAA--G-A-ATCA-TTACCGAGCTGAGGTACCCATCGAGCACAAACCTTTTAT-ACCTTT-AGCGGTTTAG---TCAGGAT-TTCGTTGTC-A--AT--------A------------GA-----------TACTGAC--------TAAAACAGA----AAGTTTTTGTAAGGTGTATCTAGCATAATCTTTGTTGAT---GTTAT----ATACTGTATAAGTGTTTA------TAAG-TGTT---TG-AAG------AAG-TAAC---AATAGACTTAGG-------------C----------G----------TTCCA----------A----TGAAAG---GACTATCTTTGATT--TATTTT-TTTCCGTCTTTAA-ATGTTTTTTACC-ATC----TGTAAACCGTTGCTCTAGCGAAATT---GACGACCGATGTA---CATCACACAATTCAG---AGT-------AT-ATAACT-T---TACAA-G-----GTATATCTAAAA
gi|13 : aatacttcagGTCACCAGTA--AGCAATTCAATTATCCGTT--TTA-ACTACAGTTTTTATAC-T-T---TTA-AA----GCA----T-TTT-----G---T---------ACTCTCGTG
gi|13 : ATCTAGC---ATCTTCTTTGATGCAGTT----------TGC---AA---------------------------CAG------TAA-TAAC---C----------GACATGGTACTACTC----------C----------TACTA----------G----AGTGAG---GATCATGTTTGATG--TCAAAT-ATTCCATtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagatctagcatcttctttgatgcagtttgcaacagtaataaccgacatggtactactcctactagagtgaggatcatgtttgatgtcaaatattccat
gi|14 : gtcaccagtaagcaattcaattatccgttttaactacagtttttatacttttaaagcattttgtactctcgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagCATGTTCGTT--TTTTATTACAATGTTTATAC-T-T----CT-AAAGCTGTA----T-TTTTAGGAG---TTTTGTACTTACTA----GGCCGTTTGT--T-A-ATCAATTAA-GAGATGAGGTAGACTTTTAGCAGAAATCATTTTT-ACCTTT-ACATGTTTAG---TCAAGAT-TTCG-TG---A--AC--------A------------GC-----------TGC
gi|14 : GC---ATCTT---TGATGCAGTAAT----GTTCTGC---AA-----A------TA---TGTT---GA-CAT------CAA-TAAC---A----------GCCGTACTGGA---C----------C----------TACCA----------G----TGTGAT---GATCATCTTTGATGACTCAAATGTTTCCatctttgatgcagtaatgttctgcaaatatgttgacatcaataacagccgtactggacctaccagtgtgatgatcatctttgatgactcaaatgtttccgatttgtttccccccttatattatttattgtttttttaaacg
gi|15 : catgttcgttttttattacaatgtttatacttctaaagctgtatttttaggagttttgtacttactaggccgtttgttaatcaattaagagatgaggtagacttttagcagaaatcatttttacctttacatgtttagtcaagatttcgtgaacagctAACACCACGT-GGCATTAT-TGTA----ATATAAAT--C-CTA----ATTTTTAGCTTG-AA----TC-TGC-----CT--TCA---------TTTTCAC--------AG-TAA----A--------A--------TA--------TG--GCCAGTGTACTCAT-AAATCGCT---TTTCAAA-TAAATGTAAATGTGGT-CCGAAT----GCAC-G-GATTTCAAAAAAGT-TACGTTCATCTCGTA--TATC-AACAGCCACTCTTGTTTTGG--CATGTAGAT-CGCGT-TTA--AA----AACA-----ATGTAAAGTATCGATAGGAGCGCATTTATC-TAAAAAAATGTTCCGTTTGCCTCTTGTAgatttgtttccccccttatattatttattgtttttttaaacg
gi|16 : -A-ATCAGTTAA-GAACTTAGGTGCCAATCTAGCACAAATCATTTGT-ACCTTT-AGATGTTTAG---TC---------G-CA---A--AT--------A------------GC-----------TGCCGA-----------TAAGATGCC--AAGGTATTGCAAGGTGTATCTAGC---ACCTTATTTGATGCAGTTAT----GTACTGC---AG-----ATACTAGTA---TGTT---TG-CAG------t
gi|16 : tctttggccttgtgttgtcccattgttatcagtt----TGTAAACCGTTTCTTTATAGACATT--AGACGTCCCATGTACAT-A--ACATATTTCAG---A-aattatttgcatgtaaaccgtttctttatagacattagacgtcccatgtacataacatatttcagaa
gi|17 : tctttggccttgtgttgtcccattgttatcagttaatcagttaagaacttaggtgccaatctagcacaaatcatttgtacctttagatgtttagtcgcaaatagctgccgataagatgccaaggtattgcaaggtgtatctagcaccttatttgatgcagttatgtactgcagatactagtatgtttgcagaattatttgcaT-GCAGAA----GGCAT----------------------------------ATAC-------------CTCGCAATTCAGTTGCTGGTCATCTT-TATG-CATTT---ACCT-ATTTGACTGGTATTAACACAGAAATTTT--GTACAAGTTACCAGTAATTGATCGAGCATTTGT--GG--TA-GGAA-TTTGAATGACA---------GAACTG--AAGAATAT-GAGTAGAG--TATGTTTTTGGCATTACTCAAATGTTTGGCAATAATTTATCTTCT-TTGACCTTTTTa
gi|18 : attcagaaattatttattatctTTACAACGCTATGC-A------T-TTTG----GTATAATC--T-CTA----ATTTCCGATTTT-AAA--TTC-T-C-----CT--TTA---------T--------------TA-T------A--------A------------------CA--AC--------ATATCGAC-GACCTTGTTCCAAA-TGAATGCAGCATCGGTATTGTTT----AC-T-A-TATTTCGGTAGAAG-TGCGTGCATTTTGTAGCTGTTCAATA---GCTCTT-TTTTAT--GATTTAAAC-AG----TATCG------AACTTG--CAGGTATAGTTTCTATGGAACCGCt
gi|19 : ACAGTTCAG-----T---AAATAT-ATG----T---TAAAG-G-----ACATGTCTGAAACCCTGAGC-A------TCTTTT----ATATAAAC--C-CGA----ATTTCAGATTGC-AAG-TTTC-T-C-----ATCATTA---------T--------------AG-C------A--------A--------AG--------TGGTATCAGTGT--TTTT-TACTGATTGTATTCCAAA-TGAA--CAACTCTAGTATTaat
gi|2 : ttaataaaccgtgtcccaaaGCTGGGCAATTTGGCTCTTG--GGGA----CAACT----A-CATT----AC-------------C-------------ATGCAGGAAGCA-----CATGCTAACAAGTCGTT----TTCTT-TTT---ATAT---AGAT--TCCAACTGTTT----GATA---TTTTT--GTAAATGTTACCAATAATATATCGAGCATT---------AA-GG-A-TTttctgaacaattcccac
gi|2 : ATTCACATATTCGTT------ACTACAATTTTTATAC-T-T-C-TGC-AA-----TA----T-TTTCTTTCGCTTTTTT-TGT--ATGCTCGTGGCCTTTTGG--G-A-ATCAGCTAA-GAAATGAGGTACCCATCTAGCGCAGATATGTTT--ACCTTT-TGATGATAAG---TAAGAAT-TTTG-TA---ACAACTGCCGATAA------------GA-----------TGCCAAC--------TATATGAGG----AAGAT----------------------------TTTGATGCAGTAAC----GAACTGC---AG-----A------TA---TGTT---TG-CAG------CAA-TAGC---A----------G-------------C----------CAACGTGGACCTACCG----------C----TTTCAG---GTTCATCGTCGATG--TCAAAT-TTGCCATCTTTAA-ATACCTTGTCCC-ATC----TGTAAACCGTTGCTCTGGAGACATT--TCATGGCCCATGTA---TATCACACAAT---A---A-C---GAAAAT-ATAATT-T---TACAATGTACATGTATATTTAAAACGCTACAC-G------T-TTTG----ACATTACC--TATTA----ATTT-AGACTTC--AA-ATTC-T-C-----CT--TCA---------C--------------AA-T------GATAACAAAA--------TA--------CG--ATCAGTGT--ACAT-GACTGGCCTT-TTTCAAA-TGCATGTAACTTCGGTTTTAAAT----AC-C-CAAATTGCGATAAAAT-TTCGTGCATTTTGTAGCTATTGAATA---ACTCGT-TAGTGT--GATGTAAAC-CG----TTGCGAC----ATTG----CAGGTATAATTTTTATGAAAACGCGTTCGTCTTAAAATA----TCCGTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcacatattcgttactacaatttttatacttctgcaatattttctttcgctttttttgtatgctcgtggccttttgggaatcagctaagaaatgaggtacccatctagcgcagatatgtttaccttttgatgataagtaagaattttgtaacaactgccgataagatgccaactatatgaggaagattttgatgcagtaacgaactgcagatatgtttgcagcaatagcagccaacgtggacctaccgctttcaggttcatcgtcgatgtcaaatttgccatctttaaataccttgtcccatctgtaaaccgttgctctggagacatttcatggcccatgtatatcacacaataacgaaaatataattttacaatgtacatgtatatttaaaacgctacacgttttgacattacctattaatttagacttcaaattctccttcacaatgataacaaaatacgatcagtgtacatgactggcctttttcaaatgcatgtaacttcggttttaaatacccaaattgcgataaaatttcgtgcattttgtagctattgaataactcgttagtgtgatgtaaaccgttgcgacattgcaggtataatttttatgaaaacgcgttcgtcttaaaatatccgttttg
gi|21 : gctgggcaatttggctcttggggacaactacattaccatgcaggaagcacatgctaacaagtcgttttctttttatatagattccaactgtttgatatttttgtaaatgttaccaataatatatcgagcattaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGGACAACTTCGCTCTTGTTGGCAG------CT----G-CATT----AT-------------CGTTCAGGAAGCATATGT-------------ATCGCAAACCAGTTGCTGGTTTTCTT-TTTTCCATAT---ACCT--TTTAACCCTTTTCAAGACAGGTTCTTT--GTAAACGTTACCCGTAATGGATCGACtg
gi|22 : CAG---A-A---AAAGA--AT---T-T---TACAC-G-----GTATATTTTAAAAGCAACGCTT------T-TTTATATTATATAATT--C-CTA----ATTTCAAGCTTC-AAA-TCTA-T-CTTCATCT--TCA---------G--------------AG-TAA----A--------A--------TA--------TG--GCCAGTGT---TCT-TACTGACCATATTTGAAA-TGAAT
gi|23 : TATCTAGC---AAATAATTTGATGTAATTGT----TCACAGC---TG-----A------AA---GGTT---TT-CAGGAAAGACAGATGAC---GTTG-------G-------------T----------C----------TCCTA----------G----AATGAT---GATCATCTTTGATG--TACAAT-TTTCCAa
gi|24 : cttattacttctttattTT--GTAAAACTTACCAGTAACAGATCGACCATT--T--GGAATA-AG-A-TCAGAAC----C-ACT-C--GAATTA--AAAAActatcatttttat
gi|25 : CTGGACAACTTGGCTCATGTGG------GCAGCT----G-CATT----ATCGTGCAGGAGGCAC-------------ATGC-------------TTGGCAAACAAGCTGCTGTTTTTTTTGTTTT-CACAT---AACT-GTTCGATTTTTT---AGACAgcgtgtaaagaactttctggtactcgttgaaagcttagcaatacttggtatttcttgtcct
gi|26 : TCGTGCACTGTGTAGCTATTGAATA---GCTGTT-TATTGT--GCTATAAAT-CT----TTAC--A----AATTTA--CAGGTAAAGTTGCCATGTTAGCACTTTTGTC-TAAATGAA--TT-CGATTGCCCct
gi|27 : aGCATTGTGTAACTATTGGATA---ATTATT-TATTATTATATATAAAA-TG----TTACGAA----TCTG----CAGGTATAGTTTCCACGG------------C-TAAATAAA--TTCCGATTGCCGCTTGat
gi|28 : CGCAAAAT-GTTGCTAGTCTTCTT-TTTT-CATCT---ACCT-ATTTCATTTTTTTCAAGACAGAGTTTTT--GTGAAAGTTACCAGCGATTGATCGACCAT
gi|29 : GTTATTGATCTTTAT-ATTT-CATATTTCACTT-GTTTGATTATTTTCAAGACCGACTTTGT--GTAAACGTTACCAGTAATT
gi|3 : GCTAGACAACTTGGTTCTTACGGGCAGT------T----G-CATT----AT-------------CTTGAGGCAA----ATTC-------------CTCGCAAACCAGTTGCTGGTTTTCTT-TTTT-CATTT---ACCT-GTTTGACATTTTTCAAGACAGAGTTTTT--GGAAAAGTTACCAGTAATTGACCGACC-----------------------GAATAACACGACCGCTTTATTTT--ATGAATATCAAGTAAAG--TACCTTTTTTGT---ACTCCA--------CGA-GA---GTCTcaaacgacag
gi|3 : TCACATATTTGTTGTTTT-ATT-TAATTTTTATAC-T-T---TTG-AA----GCA----G-TTTTTTCC-----CTT-TGT--ACTCACGTGGCCTTTTGG--G-A-ATCAGTTAA-GT--TAAGGTACCCATCCATCACACATCTTTTTTTAACTTT-AGATGTTTAG---TCAGGAA-TTCT-TG---A--AC--------A------------GCTACCTATGAGATGTCAAC--------AATAGAAGA----AAGATCGTGCAACGTATATATAGC---ATCTTTTTT-ATACAGTTAT----GTACTGT---AG-----A------TA---TGTT---TG-CAG------TAG-TAAT---A----------GCTGACCTTGA---C----------C----------TACCA----------G----TGTGggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgaccttgacctaccagtgtgtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|3 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntccCTTG-ACCTACCAGTGTGTCAAATTTTGCTCCAGAGACACT--ACACGACCCTCG---AGCATCACACAATTCAG---A--------AATGATAGCT-T---TACAG-G-----TTATTTTTAAAAC------------------------------ACC--T-C------ACTTC----CTC-AAATATTC-T-C-----CT--TCA---------A--------------AA-T------G--------A--------TAACAAACTTCG--CTCTGTGT--GTAT-GACTTACCTTTTGTCAAAATGAATGTAACTTCGGTATTGTGT----AC-C-A-AAATTCGATAAAAT-TTCATGAATTGTGTGGCTATTGAATA---ACCTTT-TATTGT--GAATTAAAT-CG----TTACGG--------GTTTGCAGATAGAGTTTCAATGAAAACGCGTTtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|30 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgacAGTTGTTGATCTTTTT-TCTT-CATAT---ATAC-ATTTGACTTTTTTCAAGATATAACTTTT--GT-AACGCTACCAGTAATTGATCGACCAt
gi|31 : ATGCGGTTTCCATCTAGCACAAATCTTTTTC-AT-------ATGTTTAT---TCAGGAT-TTTG-TG---A--AC--------A------------GC-----------TGCTG-----------ATAAGA
gi|32 : GCTGGACAAGTTGGCTGTAATTAGCAGTTGCAGTATCATG-CATTCGGCGT---------------------------ACGC-------------CTCGCAAACGAGTTGCtgcctt
gi|33 : tGTATAGTTTCCATGGGAGCGTGTGTGTC-TAAAACCT--TTCCGATTGCCCCTCGCA
gi|4 : aAGCTTGACTCTTGTTGGCAGT------T----G-TATT----AT-------------C-------------ATGCAGGAGAAACATGCCTCGTAAACCAGTTGATGGTCTTCTT-ATAC-CACAT---ACCTTGTTTGACCTTTAACAAGACA-TATTTTT--GTAAATGTTACCAGTAATTGATCGGCCATT--TTGGG--TA-AA-ATTTTGAATGAC-T-ACCGCGGGAACTGAAAAAAATATTG--TGTAGGTTACCTTTTTTGC---A----A--------TGATTA---GTCTTCTGTTG-TCTTTTTCGTCTAATGTTTAATTATCATACCGACGTTGGGACTCGAAATAAAACACCAATGTATTc
gi|4 : actTTGCG---TTTT--AT--ACTTTCGTGGCCTTTTGG--G-A-ATCATTTGA-GAGATGAAGTACCTATCAAGCACAAATCTTATTT-ACCTTC-AGATGTTTAG---T-------------G---A--AA--------A------------GC-----------TGCCGATAA------GATAAAAG------AGATCTCTCAAGGTGAACCTAAC---ATCTTCTTTGATGCAACCAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------TAG-TAAC---A----------G-------------C----------C----------TACTA----------AGGCTTACCAGCGCGATAATCTTTAATG--TCAAAT-TTTCCATCTTTAA-CTTTCTTGTACC-ATC----TATAAATTGTTGCTCAAGAGACATT--AGACGGCCCATGT---TCATCACATAATGCAG-----T---AAG--T-ATAGTT-T---TAGAA-A-----GTATATTTATATTGCCACGC-G------T-TTTA----A-------------A----A---CAGACTTC-AAA--TTC-T-A-----CT--TCA---------T--------------AA-C------G--------A--------TA--------aaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|4 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaacttctgaaacactcgAACTTCGATTTTGTAT----AT-TAT-GATTGCGATAAAGT-TTCGTGCAGCGTGTAGCCATTGAAAA---ACTCTT-TATTTT--GTTATAAAC-CG----TTA---A----ATTGTG--CAGGTATAGTTTTCATGGAAGCGCATTTGCC-TAAAATAT--TTCCGATTGCCTCTCGTAacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|5 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataaca-ACAACAATGTTTATAT-G-T-C-TGT-A-----GCA----T-GTTTTGGCG---TTTT-TA---GCTCTCGTGG--TTTTAGTGG-A-ATCAGTTAA-GAGATGAGGTACCAATCTAGCAT--------------CTGT-AGATGTCTAT---TCAGAAT-TTCG-TG---A--AT--------ATCTGCCAATGAGA------------TGCCAAC--------TAAATGAGA----AAGATCTTGCAAGGTTTATCTAGC---ATCTTCTTTGATGTAGTCAT----GTACTGC---AG-----T------TA---TGTT---TC-AAG------CAA-AAAC---A----------A-------------C----------CGACTTTAGCGTACCA----------G----TGTGAG---GAATATCTTTGATG--TAAAAT-TGTCCATCTTTAA-ATTTCGTGTGTC-ATC----CGTAAATTGTTGCTCTATAGACATA--AGATA---CAT-TACATCAT-AC---ATT--G---A-A---GAAAAT-ATAGCT-T---TACAA-G-----ATATG--------------------------TTA----ATATAACC--T-CTA----ATTTCAGACTT--AAC-GTTT-T-C-----CT--TCA---------T--------------GA-T------G--------ATAACAAAGTA--------CG--ACCAGTGT--ATAT-GACTAACCTAATTTCAAA-TGAATGTAACTTCGGTATTATAT----CC-C-C-AATTGCGATAAAAT----GT-CATTATGTAGCTATTAAAAA---ACTCTT-TACTGT--GAAATAAAT-CG----CTACAAATTTGAATG-----AAG---AGTTTCTATGGAATCGCGTTCGTC-cc
gi|6 : aA----GCA----TATCTTTGGCG---TTTT--GT--ATTCTCGTGACCTTTAGG--T-A-ATCAGCTAA-GTGATGAGGTACCTATCTAGAACA----TTTTAA-ATATTT-AGATGTTAAG---TCAAAAT-TTCG-TGAAAA--ACTGTCGATAA------------GA-----------TGCCAAC--------TATATGAGG----AAGATCTTCC------------------------TTAATGTCGATAT----GTACTGC---AG-----AT-----TATTTTGTT---TG-CAG------CA
gi|6 : ttgcAT-TTTTCATCTTTCA-ATT-CTTGTACC-ACC----TGTTAATCGTTGCT--AGAGACATT--AGACGAACTGTGT---TAATCACA------AG---A-------AAAT-GTA--T-TATATACAA-G-----GTCTATTTAAAACGCTACAC-G------T-TTAG----ATATA-CTTTC-TTATTTCATTTCAGACTTC-AAA--TTC-C-C-----CT---CA---------TTAATAATAACAACCAA-T------A--------A--------CA--------AG--ACCAGTGT--ATAT-GACTGACAGTATATCAAA-TAAATGTAACTTCTGTTTTGTATGTATAT-C-A-CATGGCGATAAAAG-TTTGAATATCTTGTAGGTATTGAATA---ATTCTT-TATTAT--AATATAAAC-CG----TTACGAA----Atttttcatctttcaattcttgtaccacctgttaatcgttgctagagacattagacgaactgtgttaatcacaagaaaatgtattatatacaaggtctatttaaaacgctacacgtttagatatactttcttatttcatttcagacttcaaattcccctcattaataataacaaccaataacaagaccagtgtatatgactgacagtatatcaaataaatgtaacttctgttttgtatgtatatcacatggcgataaaagtttgaatatcttgtaggtattgaataattctttattataatataaaccgttacgaaattg
gi|7 : ttgcagcatatctttggcgttttgtattctcgtgacctttaggtaatcagctaagtgatgaggtacctatctagaacattttaaatatttagatgttaagtcaaaatttcgtgaaaaactgtcgataagatgccaactatatgaggaagatcttccttaatgtcgatatgtactgcagattattttgtttgcagcTGA--G-ATATCTGTTAA-AAAATGGGGTAGACGTCTTGCGCAAACTTAATTT-ACGCCT-AAAT---TAGAGGTCA-AATGTTCA-TG---A--GC----------------------------------TGCTGACAATGGAACTATAAGAGCTTTTAAT-TCTTTAAATGTGAATCTTGC---ATCTTTTTTTAT------AT----GT-TTTC---AG-----A------CA---TG------A-CAG------C---TGACTTTG----------G-------------C----------T----------T--C---------------------------TCAT-TATGACG--GCCAAT-TTTCCATTATTAACATAT-TTATGCC-ACC----CGTAAAATGTGACCTTAGAAATGTTTAAGA--ACCCATGCA---CATGACACAATT------A-C---AAAAAT-ATAGGTGT---TA-AA-A-----GTATATTTAAAATGCTACGC-A--------TTTA----ATATAACT--C-TTA----ATGTCGAGCTTC-ttg
gi|7 : TTTCAGTAAAAT-GACGTATATCCTGTAGAAACAAGACC---ACTCTT-TATTGA--CATGTAAAC-TGTATTTTA-AAA----AAAGT------ACATAGTTTCTATAGGAGTGCATATGTC-tgccttcatttccacagtaaaactatatttcagtaaaatgacgtatatcctgtagaaacaagaccactctttattgacatgtaaactgtattttaaaaaaagtacatagtttctataggagtgcatatgtc
gi|8 : tgagatatctgttaaaaaatggggtagacgtcttgcgcaaacttaatttacgcctaaattagaggtcaaatgttcatgagctgctgacaatggaactataagagcttttaattctttaaatgtgaatcttgcatctttttttatatgttttcagacatgacagctgactttggcttctcattatgacggccaattttccattattaacatatttatgccacccgtaaaatgtgaccttagaaatgtttaagaacccatgcacatgacacaattacaaaaatataggtgttaaaagtatatttaaaatgctacgcatttaatataactcttaatgtcgagcttctgccttcatttccacagtaaaactataATTTAGC---ATAT-GTTT-ACGCTGTTAT----GTACTTC---AG-----A------TA---CGTTATATGATAG------CAG-CAAC---ACCCGACTTGAG-------------C----------C----------TACCA----------G----TGTAAG---GATCATTTTTTATG--TC-AATATTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTTTACCGTTGCTTTAGAGGCATT--AGACGATCAATGTGCAT-AGTACACAAT---------T---AAAAAT-ATGGCT-T---TAAAA-G-----GTCTATTACAAACGCCACGC-C------T-TTTC----ATAT-ACT--T-CGA----ATTTCA-ACTTG-AAA-ATTC-T-------CT--TCT---------T--------------AA-TTATATAGCAAC----A--------TA--------CA--ACCAGTGT--TTAT-AACTGA-CTTGTTTCAAA--GTATGTAGCTTCAGTATAGTAT----AT-C-C-AAGT---ATA---------TACACTGTGTAGCTATTGAATA---ACTGTT-TATTGT--GATATAAAT-C-------ATGGA----TATATTG-CTGGTATCGTTACCATGGAAACGCGATTGTC-
gi|9 : TTTTCATCTATTGTTTA-TTACCTACAAGAAATTGGAGTTCAATATAAAACACCCATGTCTTGCCACCACTATTAGT--------------TT--TTT-ACTATAACTTTACTAC-T-T-C-T-T-AA----GCAGTTTT-TTCTTTGCA---TTTT--GT--ACTCTTATGGCCTTTTGA--G-A-ATTAGTTAT-GCGATGCGGTACCCGTCTGGCACAAATCATTCTT-GCCTTT-AAATGTTTAG---TCAGGAT-TTTG-TG---G--AC--------A------------GCCTGTA------TGCCAAC--------TACATGAGA----AAGATCTTGCAATATGTTTCTAGC---ATCTTCTTTGATGCAG--------G----GC----------------------TGTT---TG-CAG------TAG-TTAC---A----------G-------------CCAACTTAGGTC----------TACCA----------G----TGTGAG---GATCATCTCTGATG--TC----------------AA-AATTCTTGTACC-ATC----TGAAAACCTTTGCTCTCAACACATT--AGACGACCTATGT---TCATCACACAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): TCATTTTTATATAACTCTTAATTTCAAGATACACTTCTGCTTTCATTTTCACACTAAGTCCAGTAAAACGAATGTAGATCCAGTCCGAATTCATACACGAATTTTAATACAAATACGTGAATCTTGTAGATAAATTTCCATATATACCACTTTTAAAATAAATGT
Alignments
lowQualScore : 333333333333 1111 99999999999999999999999999999999999999999999 44444444444444444444 11 11 333 111 55555555555555555555555555555555555 1111111 2222222222222222 11 11 111111 22 1111111111 1 555555555555555555555555555555555555555 11111 111111111111 88888888888888888888888888888888888888888888888888888888888888888888888888888888 22222 33333333333 111111111111111111 1111111111 6666666666666666666666666666666666666666666666666666 1111 33333333333333333333333 111
lowQualScore : 33 999999999999 2222 22222222222222222222222222222222222222222222 0 4 4 777 88 4 999 55 1 77777777777777777777 5 11 55 11 1 0 3 1 0 333 1 444 88888888888888888888888888888888888 9999999 1 1 4444444444444444 1 1 33 5 11 1 000000 5 9999999 66 7777777777 5 7777 0 55 3 3 3 1 0 3 3 3 0 555 4 3 3 44 555 111111111111111111111111111111111111111 1 44444 6 0 1 3 0 5555 444 444444444444 777 444 2 777777 2 99999999999999999999999999999999999999999999999999999999999999999999999999999999 555 44 7 5 0 7 1 3 6666 11 1 555 1 0 33333 33 66 00000000000 3 888 3 555 1 3 77777 0 1 555555555555555555 5555 1 6666 2 33 3333333333 888 9999999999999999999999999999999999999999999999999999 44 4 44 3 1 1 3 2 8888 4 4444 4 444 4 0 888 3 44 3 99999999999999999999999 0 1 1 2 4 1 444
lowQualScore : .. ............ .... ............................................ . . . ... .. . ... .. . .................... . .. .. .. . . . . . ... . ... ................................... ....... . . ................ . . .. . .. . ...... . ....... .. .......... . .... . .. . . . . . . . . . ... . . . .. ... ....................................... . ..... . . . . . .... ... ............ ... ... . ...... . ................................................................................ ... .. . . . . . . .... .. . ... . . ..... .. .. ........... . ... . ... . . ..... . . .................. .... . .... . .. .......... ... .................................................... .. . .. . . . . . .... . .... . ... . . ... . .. . ....................... . . . . . . ...
lowQualScore : 11 333333333333 1111 77777777777777777777777777777777777777777777 1 0 0 000 88 9 000 55 0 77777777777777777777 6 44 66 00 4 8 2 4 8 888 0 000 00000000000000000000000000000000000 5555555 0 0 5555555555555555 0 0 88 8 00 5 999999 0 2222222 88 6666666666 5 7777 6 55 6 6 6 5 2 1 1 1 2 444 5 1 1 22 444 777777777777777777777777777777777777777 0 55555 0 5 4 6 6 3333 444 888888888888 888 444 5 222222 9 33333333333333333333333333333333333333333333333333333333333333333333333333333333 444 22 0 7 3 3 0 3 5555 99 4 000 4 2 33333 22 55 00000000000 1 222 1 444 5 1 77777 1 2 999999999999999999 4444 4 1111 9 99 3333333333 555 2222222222222222222222222222222222222222222222222222 66 2 66 3 0 9 3 5 5555 0 2222 5 888 7 2 555 1 22 1 99999999999999999999999 8 0 6 1 0 0 444
consensus : GCTGGACAACTTGGCTCTTGTNGGCAG-TGCAGC----TGCATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAAGG-TACCTTTTTGGT---ACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC---T---TCTG-AAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GC-----------TGCC-----------GA-----------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTAT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
Reference ( family-1287 ) : GCTGGACAACTTGGCTCTTGTNGGCAG-TGCAGC----TGCATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTGGAATTG--AAGAATATCGAGTAAAGGCTACCTTTTTNGC---ACTCCA--------CGATGA---GTCT------------TCT-T---T-GNCTTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC---T---TCTNTAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GC-----------TGCC-----------GA-----------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTNT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
gi|1 : GCTGGACAACTTGACGCTTGTGTGCAG-TGCAGC----AGCGTT----AT-------------C-------------ATGC-------------CTTGTAAACCAGTTGCTGGTCTTCTT-ATTT--ATAT---ACCT-GTTTGACCTTTTCCAAGACATTTTTTTTTTGTAAAAGTAACCAGTAACTGATTGACCATTATT--GA--TACAA-A-GTTGAATGACATGACCGGTGGAATTG--AATAATATCGAAAAAAAGC-ACCTGTTTGAT---ACTCC---------TGATGG---GTCT------------TCT-T---TTGGCCTTT---------------ATTATCAACCCGACGTTTGGGCTTGAAGTAAGACAGGAATGCTTCGTCACCAATA--AGTAAT--TCACATATGCATT--TTC-ACTACAATTT-TTATACATGTACGTCT-TAAGC---A----T-TTGTTTACG---TTTTTACATTCCCATAGTCTTTTGG--GGA-ATCCGCTAA-GGGATAAGGTACCCATCTAGCACACATTTGTTTT-AC-TTTTCAGATGTTTGG---TCAGAAT-TGCG-TG--AACA----------------TGCC-----------AA-----------TTATAAAAGG----AAGATCTTGCAAGGTGTATATAGCATCTTATT-GATGCAGTTAT----GTACAGT---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TGC----------CA----------G----TATACG---GATTATCTTTGATG--TCTAAT-TTTCCATCTTTAA-ATTTTTTGTATC-ACC----TGTAAAATGTTGCTCTAAAGACATT--AGATGACCAATGAACATCATCACACAATTGAGAAAA-TGAGAAAAAT-ATAGTT-T---TACAA-G-----GTTTATGAAAAACGCTATGCA------T-TTT---A--ATTCAACC--T-CTA----ATTTCAGACTT-CAAAAA------A---TAT---CTTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTTT--AT-GACTGACCTAATTTCAAA-TAGATGTAACTTCGGTATTGTAT----AC-C-C-ATTTTCGTTAAAAT-TTCGTGCATT-TGTAGCTATTGAATA---ACTCTT-CCGTGT--GATATAAAC-CG----TTCCGAA----AACGTC--CAGGTGTAGTTTCTATCGAAACGCGTTCATC--AAAATA--GTGCCGATTGCCCCTCGTA
gi|10 : GCGCCAACATTATTT-ACGCCTT-A-ATGAGTGA---TCACCAT-CTCA-TA--AACT---GC-----------TGCC-----------GGTGAAATGCCAGCTATACGAGC----TAATTCATTCACTGTGTAGCTAGCATCTTCTTTGATGCAATTGT----GTGTAGA---TG-----A------TA---TGTT---TT-CAG------AAA-TGAA---A----------G-------------C----------T----------GACTTTGGCTTCCCA----------G----AATGAC---GGCCATCATTGAAG--TCCAAT-TTTCCACGATTAACATTT-TTATGCC-ACC----TGTAAAT-GT--------AAATGTT--TAAGGACCCATGTAC--C-TGACACAATTCAG---A-------AAAT-ATAGGT-T---TGAAA-G-----GTATATTTAAAACGCTACGCA------T-TTT---T--ATATAACT--C-ATT----ATTTCAAGCTT-C--GAATCTGCCT---TCA---CTTTCAC--------------AG-TAA----A--------A--------TA--------TG--ACCAGTGTAC---T-CACTGACCGCATTTCAAA-AGAATGTA
gi|11 : GCATCTTCCTTGATGCGGTGACTTTAATACTGC---AG-----T------AA---TAGA---TA-CAG------CCG-TGAT---T----------G-------------C----------C----------GCC----------CAAGACATAACTG----TACGAA---GCTCGTCTTTCGTG--TCCATT-TCTTTATCATTAA-ATTTCTCACATC-ACC----AATAAACTGTAGCCATAGGCGCGTC--TGAAGGCCCATAAACAGCA---CAAAGTTCAG---A-------AAAC-AT--CT-T---AACAC-G-----GCATA---------------------------------ATATAAAC--C-CGA----ATTTCAGA-TT-C--AAA------T---CGT---CCCTCAT--------------AAGT------GTAGCAAA-A--------TA--------TT--ACCAGTGTAT--AC-GACTGACCGTATTTC-AA-TGCATGCAATGTTGGTATTATGT----GA-C-T-GAATACCACCAAATGTTCGTGCAATGT-TAGATAATCAATAC--AC-CTT-TACTGC--AATATAACCACG----TTACGTA----A
gi|12 : cATAC---T---TC-AGAAGC-----------TTTATGCG---TTTT-GTACTCCGGTGGCCTCTTAA--G-A-ATCA-TTACCGAGCTGAGGTACCCATCGAGCACAAACCTTTTAT-AC-CTTT-AGCGGTTTAG---TCAGGAT-TTCGTTGTCAATA---GA-----------TACT-----------GA-----------CTAAAACAGA----AAGTTTTTGTAAGGTGTATCTAGCATAATCTTTGTTGATGTTAT----ATACTGTATAAGTGTTTA------TAAG-TGTT---TG-AAG------AAG-TAAC---AATAGACTTAGG-------------C----------G----------TTC----------CA----------A----TGAAAG---GACTATCTTTGATT--TATTTT-TTTCCGTCTTTAA-ATGTTTTTTACC-ATC----TGTAAACCGTTGCTCTAGCGAAATT---GACGACCGATGTA---CATCACACAATTCAG---AGT-------AT-ATAACT-T---TACAA-G-----GTATATCTAAAA
gi|13 : aGTCACCAGTA--AGCAAT--TCAATTATCCGTT--TTA-ACTACAGTTT-TTATAC---T---TTTA-AAGC---A-------------------TTTTGTACTCTCGTG
gi|13 : ATCTAGCATCTTCTTTGATGCAGTT----------TGC---AA---------------------------CAG------TAA-TAAC---C----------GACATGGTACTACTC----------C----------TAC----------TA----------G----AGTGAG---GATCATGTTTGATG--TCAAAT-ATTCCATtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagatctagcatcttctttgatgcagtttgcaacagtaataaccgacatggtactactcctactagagtgaggatcatgtttgatgtcaaatattccat
gi|14 : gtcaccagtaagcaattcaattatccgttttaactacagtttttatacttttaaagcattttgtactctcgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagCATGTTCGTT--TTTTATTACAATGT-TTATAC---T---TCTA-AAGCTGTA----T-TTTTAGGAG---TTTT-GTACTTACTAGGCCGTTTGT--T-A-ATCAATTAA-GAGATGAGGTAGACTTTTAGCAGAAATCATTTTT-AC-CTTT-ACATGTTTAG---TCAAGAT-TTCG-TG--AACA---GC-----------TGC
gi|14 : TCTTTGATGCAGTAAT----GTTCTGC---AA-----A------TA---TGTT---GA-CAT------CAA-TAAC---A----------GCCGTACTGGA---C----------C----------TAC----------CA----------G----TGTGAT---GATCATCTTTGATGACTCAAATGTTTCCatctttgatgcagtaatgttctgcaaatatgttgacatcaataacagccgtactggacctaccagtgtgatgatcatctttgatgactcaaatgtttccgatttgtttccccccttatattatttattgtttttttaaacg
gi|15 : catgttcgttttttattacaatgtttatacttctaaagctgtatttttaggagttttgtacttactaggccgtttgttaatcaattaagagatgaggtagacttttagcagaaatcatttttacctttacatgtttagtcaagatttcgtgaacagctgcaAACACCACGTGGCATTAT-TGT---A--ATATAAAT--C-CTA----ATTTTTAGCTT-G--AA-----------TCTG--CCTTCATTTTCAC--------AG-T------A--------AAA------TA--------TG--GCCAGTGTACTCAT-AA---ATCGCTTTTCAAA-TAAATGTAAATGTGGT-CCGAAT----GCAC-G-GATTTCAAAAAAGT-TACGTTCATCTCGTA--TATC-AACAGCCACTCTTGTTTTGG--CATGTAGAT-CGCGT-TTA--AA----AACA-----ATGTAAAGTATCGATAGGAGCGCATTTATC-TAAAAAAATGTTCCGTTTGCCTCTTGTAgatttgtttccccccttatattatttattgtttttttaaacg
gi|16 : -A-ATCAGTTAA-GAACTTAGGTGCCAATCTAGCACAAATCATTTGT-AC-CTTT-AGATGTTTAG---TC---------G-CA--AATA---GC-----------TGCC-----------GA--------------TAAGATGCC--AAGGTATTGCAAGGTGTATCTAGCACCTTATTTGATGCAGTTAT----GTACTGC---AG-----ATACTAGTA---TGTT---TG-CAG------t
gi|16 : tctttggccttgtgttgtcccattgttatcagtt----TGTAAACCGTTTCTTTATAGACATT--AGACGTCCCATGTACAT-A--ACATATTTCAG---A-aattatttgcatgtaaaccgtttctttatagacattagacgtcccatgtacataacatatttcagaa
gi|17 : tctttggccttgtgttgtcccattgttatcagttaatcagttaagaacttaggtgccaatctagcacaaatcatttgtacctttagatgtttagtcgcaaatagctgccgataagatgccaaggtattgcaaggtgtatctagcaccttatttgatgcagttatgtactgcagatactagtatgtttgcagaattatttgca-------------ATAC-------------CTCGCAATTCAGTTGCTGGTCATCTT-TATG-CATTT---ACCT-ATTTGACTGGTATTAACACAGAAATTTT--GTACAAGTTACCAGTAATTGATCGAGCATTTGT--GG--TA-GGAA-TTTGAATGACA---------GAACTG--AAGAATAT-GAGTAGAG--TATGTTTTTGGCATTACTCAAATGTTTGGCAATAATTTATCT------------TCT-T---T-GACCTTTTa
gi|18 : attcagaaattatttattatcttgcagaaggcatTTACAACGCTATGCA------T-TTT---G--GTATAATC--T-CTA----ATTTCCGATTT-T--AAA------T---TCT---CCTTTAT--------------TA-T------A--------A------------------CA--AC------AT--ATCGAC-GACCTTGTTCCAAA-TGAATGCAGCATCGGTATTGTTT----AC-T-A-TATTTCGGTAGAAG-TGCGTGCATTTTGTAGCTGTTCAATA---GCTCTT-TTTTAT--GATTTAAAC-AG----TATCG------AACTTG--CAGGTATAGTTTCTATGGAACCGCtt
gi|19 : ACAGTTCAG-----T---AAATAT-ATG----T---TAAAG-G-----ACATGTCTGAAACCCTGAGCA------TCTTT---T--ATATAAAC--C-CGA----ATTTCAGATTG-C--AAG------T---TTC---TCATCAT--------------TA-T------A--------G--------CAAAG-----TGGTATCAGTGTTT--TT-TACTGATTGTATTCCAAA-TGAA--CAACTCTAGTATTaat
gi|2 : ttaataaaccgtgtcccaaaGCTGGGCAATTTGGCTCTTG--GGGA----CAAC----TACATT----AC-------------C-------------ATGCAGGAAGCA-----CATGCTAACAAGTCGTT----TTCTT-TTT---ATAT---AGAT--TCCAACTGTTT----GATA---TTTTT--GTAAATGTTACCAATAATATATCGAGCATT--ttctgaacaattcccac
gi|2 : AT--TCACATATTCGTT------ACTACAATTT-TTATAC---T---TCTGCAA-T---A----T-TTTCTTTCGCTTTTTTTGTATGCTCGTGGCCTTTTGG--G-A-ATCAGCTAA-GAAATGAGGTACCCATCTAGCGCAGATATGTTT--AC-CTTT-TGATGATAAG---TAAGAAT-TTTG-T---AACA---AC-----------TGCC-----------GATAAGATGCCAACTATATGAGG----AAGAT-------------------------TTTGATGCAGTAAC----GAACTGC---AG-----A------TA---TGTT---TG-CAG------CAA-TAGC---A----------G-------------C----------CAACGTGGACCTAC----------CG----------C----TTTCAG---GTTCATCGTCGATG--TCAAAT-TTGCCATCTTTAA-ATACCTTGTCCC-ATC----TGTAAACCGTTGCTCTGGAGACATT--TCATGGCCCATGTA---TATCACACAAT---A---A-C---GAAAAT-ATAATT-T---TACAATGTACATGTATATTTAAAACGCTACACG------T-TTT---G--ACATTACC--TATTA----ATTT-AGACTT-C--AAA------T---TCT---CCTTCAC--------------AA-T------GATAACAAAA--------TA--------CG--ATCAGTGTAC--AT-GACTGGCCTT-TTTCAAA-TGCATGTAACTTCGGTTTTAAAT----AC-C-CAAATTGCGATAAAAT-TTCGTGCATTTTGTAGCTATTGAATA---ACTCGT-TAGTGT--GATGTAAAC-CG----TTGCGAC----ATTG----CAGGTATAATTTTTATGAAAACGCGTTCGTCTTAAAATA----TCCGTTTaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcacatattcgttactacaatttttatacttctgcaatattttctttcgctttttttgtatgctcgtggccttttgggaatcagctaagaaatgaggtacccatctagcgcagatatgtttaccttttgatgataagtaagaattttgtaacaactgccgataagatgccaactatatgaggaagattttgatgcagtaacgaactgcagatatgtttgcagcaatagcagccaacgtggacctaccgctttcaggttcatcgtcgatgtcaaatttgccatctttaaataccttgtcccatctgtaaaccgttgctctggagacatttcatggcccatgtatatcacacaataacgaaaatataattttacaatgtacatgtatatttaaaacgctacacgttttgacattacctattaatttagacttcaaattctccttcacaatgataacaaaatacgatcagtgtacatgactggcctttttcaaatgcatgtaacttcggttttaaatacccaaattgcgataaaatttcgtgcattttgtagctattgaataactcgttagtgtgatgtaaaccgttgcgacattgcaggtataatttttatgaaaacgcgttcgtcttaaaatatccgttttg
gi|21 : gctgggcaatttggctcttggggacaactacattaccatgcaggaagcacatgctaacaagtcgttttctttttatatagattccaactgtttgatatttttgtaaatgttaccaataatatatcgagcattaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGGACAACTTCGCTCTTGTTGGCAG------C----TGCATT----AT-------------CGTTCAGGAAGCATATGT-------------ATCGCAAACCAGTTGCTGGTTTTCTT-TTTTCCATAT---ACCT--TTTAACCCTTTTCAAGACAGGTTCTTT--GTAAACGTTACCCGTAATGGATCGACtg
gi|22 : CAG---A-A---AAAGA--AT---T-T---TACAC-G-----GTATATTTTAAAAGCAACGCT------T-TTTTATATTATATAATT--C-CTA----ATTTCAAGCTT-C--AAA------TCTATCTTCATCTTCAG--------------AG-TAA----A--------A--------TA--------TG--GCCAGTGT-T--CT-TACTGACCATATTTGAAA-TGAAT
gi|23 : TATCTAGCAAATAATTTGATGTAATTGT----TCACAGC---TG-----A------AA---GGTT---TT-CAGGAAAGACAGATGAC---GTTG-------G-------------T----------C----------TCC----------TA----------G----AATGAT---GATCATCTTTGATG--TACAAT-TTTCCAa
gi|24 : cttattacttctttattTT--GTAAAACTTACCAGTAACAGATCGACCATT--T--GGAATA-AG-A-T--------CAGAACCACTCGAATTA--AAAA--AGCGTGTAAAG---AACTTTCTGGT---ACTCctatcatttttat
gi|25 : CTGGACAACTTGGCTCATGTGG------GCAGC----TGCATT----ATCGTGCAGGAGGCAC-------------ATGC-------------TTGGCAAACAAGCTGCTGTTTTTTTTGTTTT-CACAT---AACT-GTTCGATTTTTT---AGACAgttgaaagcttagcaatacttggtatttcttgtcct
gi|26 : TCGTGCACTGTGTAGCTATTGAATA---GCTGTT-TATTGT--GCTATAAAT-CT----TTAC--A----AATTTA--CAGGTAAAGTTGCCATGTTAGCACTTTTGTC-TAAATGA--ATT-CGATTGCCCct
gi|27 : aGCATTGTGTAACTATTGGATA---ATTATT-TATTATTATATATAAAA-TG----TTACGAA----TCTG----CAGGTATAGTTTCCACGG------------C-TAAATAA--ATTCCGATTGCCGCTTGat
gi|28 : CGCAAAAT-GTTGCTAGTCTTCTT-TTTT-CATCT---ACCT-ATTTCATTTTTTTCAAGACAGAGTTTTT--GTGAAAGTTACCAGCGATTGATCGACCAT
gi|29 : GTTATTGATCTTTAT-ATTT-CATATTTCACTT-GTTTGATTATTTTCAAGACCGACTTTGT--GTAAACGTTACCAGTAATT
gi|3 : GCTAGACAACTTGGTTCTTACGGGCAG-T---------TGCATT----AT-------------CTTGAGGCAA----ATTC-------------CTCGCAAACCAGTTGCTGGTTTTCTT-TTTT-CATTT---ACCT-GTTTGACATTTTTCAAGACAGAGTTTTT--GGAAAAGTTACCAGTAATTGACCGACC-----------------------GAATAACACGACCGCTTTATTTT--ATGAATATCAAGTAAAG--TACCTTTTTTGT---ACTCCA--------CGA-GA---GTCTGGCAATATTTAATCT-TCGTT-GGCNNNNNNNNNN-NN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NNNNNTCCTCACATATTTGTTGTTTT-ATT-TAATTT-TTATAC---T---TTTG-AAGC---A----G-TTTTTTCC-----CTTTGTACTCACGTGGCCTTTTGG--G-A-ATCAGTTAA-GT--TAAGGTACCCATCCATCACACATCTTTTTTTAA-CTTT-AGATGTTTAG---TCAGGAA-TTCT-TG--AACA---GC-----------TACCTATGAGATGTCAA-----------CAATAGAAGA----AAGATCGTGCAACGTATATATAGCATCTTTTTT-ATACAGTTAT----GTACTGT---AG-----A------TA---TGTT---TG-CAG------TAG-TAAT---A----------GCTGACCTTGA---C----------C----------TAC----------CA----------G----TGTGcaaacgacag
gi|3 : CTTG-ACCTACCAGTGTGTCAAATTTTGCTCCAGAGACACT--ACACGACCCTCG---AGCATCACACAATTCAG---A--------AATGATAGCT-T---TACAG-G-----TTATTTTTAAAAC------------------------------ACC--T-C------ACTTC----CT-C--AAA------TAT-TCT---CCTTCAA--------------AA-T------G--------A--------TAACAAACTTCG--CTCTGTGTGT--AT-GACTTACCTTTTGTCAAAATGAATGTAACTTCGGTATTGTGT----AC-C-A-AAATTCGATAAAAT-TTCATGAATTGTGTGGCTATTGAATA---ACCTTT-TATTGT--GAATTAAAT-CG----TTACGG--------GTTTGCAGATAGAGTTTCAATGAAAACGCGTTtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|30 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgacAGTTGTTGATCTTTTT-TCTT-CATAT---ATAC-ATTTGACTTTTTTCAAGATATAACTTTT--GT-AACGCTACCAGTAATTGATCGACCAt
gi|31 : ATGCGGTTTCCATCTAGCACAAATCTTTTTC-AT--------ATGTTTAT---TCAGGAT-TTTG-TG--AACA---GC-----------TGCT-----------G--------------ATAAGA
gi|32 : GCTGGACAAGTTGGCTGTAATTAGCAGTTGCAGTATCATGCATTCGGCGT---------------------------ACGC-------------CTCGCAAACGAGTTGCtgcctt
gi|33 : tGTATAGTTTCCATGGGAGCGTGTGTGTC-TAAAACC--TTTCCGATTGCCCCTCGCA
gi|4 : aAGCTTGACTCTTGTTGGCAG-T---------TGTATT----AT-------------C-------------ATGCAGGAGAAACATGCCTCGTAAACCAGTTGATGGTCTTCTT-ATAC-CACAT---ACCTTGTTTGACCTTTAACAAGACATA-TTTTT--GTAAATGTTACCAGTAATTGATCGGCCATT--TTGGG--TA-AA-ATTTTGAATG--ACTACCGCGGGAACTGAAAAAAATATTGTGT--AGGTTACCTTTTTTGC---A----A--------TGATTA---GTCT------------TCTGT---T-GTCTTTTTCGTCTAAT-GTTTAATTATCATACCGACGTTGGGACTCGAAATAAAACACCAATGTATTc
gi|4 : actCAATGTATTAAAC---T---TCTG-AAAC---A----C-TCGTT-GCG---TTTT-ATACTTTCGTGGCCTTTTGG--G-A-ATCATTTGA-GAGATGAAGTACCTATCAAGCACAAATCTTATTT-AC-CTTC-AGATGTTTAG---T-------------G--AAAA---GC-----------TGCC-----------GA-----------TAAGATAAAA----GAGATCTCTCAAGGTGAACCTAACATCTTCTTTGATGCAACCAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------TAG-TAAC---A----------G-------------C----------C----------TAC----------TA----------AGGCTTACCAGCGCGATAATCTTTAATG--TCAAAT-TTTCCATCTTTAA-CTTTCTTGTACC-ATC----TATAAATTGTTGCTCAAGAGACATT--AGACGGCCCATGT---TCATCACATAATGCAG-----T---AAG--T-ATAGTT-T---TAGAA-A-----GTATATTTATATTGCCACGCG------T-TTT---A--A-------------A----A---CAGACTT-C--AAA------T---TCT---ACTTCAT--------------AA-C------G--------A--------TA--------aaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|4 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacacAACTTCGATTTTGTAT----AT-TAT-GATTGCGATAAAGT-TTCGTGCAGCGTGTAGCCATTGAAAA---ACTCTT-TATTTT--GTTATAAAC-CG----TT---AA----ATTGTG--CAGGTATAGTTTTCATGGAAGCGCATTTGCC-TAAAATA--TTTCCGATTGCCTCTCGTAacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|5 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataaca-ACAACAATGT-TTATAT---G---TCTGTA-GC---A----T-GTTTTGGCG---TTTTTA-GCTCTCGTGG--TTTTAGTGG-A-ATCAGTTAA-GAGATGAGGTACCAATCTAGCAT---------------CTGT-AGATGTCTAT---TCAGAAT-TTCG-TG--AATATCTGCCAATGAGA---TGCC-----------AA-----------CTAAATGAGA----AAGATCTTGCAAGGTTTATCTAGCATCTTCTTTGATGTAGTCAT----GTACTGC---AG-----T------TA---TGTT---TC-AAG------CAA-AAAC---A----------A-------------C----------CGACTTTAGCGTAC----------CA----------G----TGTGAG---GAATATCTTTGATG--TAAAAT-TGTCCATCTTTAA-ATTTCGTGTGTC-ATC----CGTAAATTGTTGCTCTATAGACATA--AGATA---CAT-TACATCAT-AC---ATT--G---A-A---GAAAAT-ATAGCT-T---TACAA-G-----ATATG-------------------------TT---A--ATATAACC--T-CTA----ATTTCAGACTT-A--ACG------T---TTT---CCTTCAT--------------GA-T------G--------ATAACAAAGTA--------CG--ACCAGTGTAT--AT-GACTAACCTAATTTCAAA-TGAATGTAACTTCGGTATTATAT----CC-C-C-AATTGCGATAAAAT----GT-CATTATGTAGCTATTAAAAA---ACTCTT-TACTGT--GAAATAAAT-CG----CTACAAATTTGAATG-----AAG---AGTTTCTATGGAATCGCGTTCGTC-cc
gi|6 : aAGC---A----TATCTTTGGCG---TTTT-GTATTCTCGTGACCTTTAGG--T-A-ATCAGCTAA-GTGATGAGGTACCTATCTAGAACA----TTTTAA-AT-ATTT-AGATGTTAAG---TCAAAAT-TTCG-TG--AAAA---ACTGTCGATAAGATGCC-----------AA-----------CTATATGAGG----AAG---------------------ATCTTCCTTAATGTCGATAT----GTACTGC---AG-----AT-----TATTTTGTT---TG-CAG------CA
gi|6 : ttgcAT-TTTTCATCTTTCA-ATT-CTTGTACC-ACC----TGTTAATCGTTGCT--AGAGACATT--AGACGAACTGTGT---TAATCACA------AG---A-------AAAT-GTA--T-TATATACAA-G-----GTCTATTTAAAACGCTACACG------T-TTA---G--ATATA-CTTTC-TTATTTCATTTCAGACTT-C--AAA------T---TCC---CCT-CATTAATAATAACAACCAA-T------A--------A--------CA--------AG--ACCAGTGTAT--AT-GACTGACAGTATATCAAA-TAAATGTAACTTCTGTTTTGTATGTATAT-C-A-CATGGCGATAAAAG-TTTGAATATCTTGTAGGTATTGAATA---ATTCTT-TATTAT--AATATAAAC-CG----TTACGAA----Atttttcatctttcaattcttgtaccacctgttaatcgttgctagagacattagacgaactgtgttaatcacaagaaaatgtattatatacaaggtctatttaaaacgctacacgtttagatatactttcttatttcatttcagacttcaaattcccctcattaataataacaaccaataacaagaccagtgtatatgactgacagtatatcaaataaatgtaacttctgttttgtatgtatatcacatggcgataaaagtttgaatatcttgtaggtattgaataattctttattataatataaaccgttacgaaattg
gi|7 : ttgcagcatatctttggcgttttgtattctcgtgacctttaggtaatcagctaagtgatgaggtacctatctagaacattttaaatatttagatgttaagtcaaaatttcgtgaaaaactgtcgataagatgccaactatatgaggaagatcttccttaatgtcgatatgtactgcagattattttgtttgcagcTGA--G-ATATCTGTTAA-AAAATGGGGTAGACGTCTTGCGCAAACTTAATTT-AC-GCCT-AAAT---TAGAGGTCAA-ATGTTCA-TG--AGCT---GC-----------TGAC-----------AATGGAA------CTATAAGAGCTTTTAAT-TCTTTAAATGTGAATCTTGCATCTTTTTTTAT------AT----GT-TTTC---AG-----A------CA---TG------A-CAG------C---TGACTTTG----------G-------------C----------T----------T------------C---------------------------TCAT-TATGACG--GCCAAT-TTTCCATTATTAACATAT-TTATGCC-ACC----CGTAAAATGTGACCTTAGAAATGTTTAAGA--ACCCATGCA---CATGACACAATT------A-C---AAAAAT-ATAGGTGT---TA-AA-A-----GTATATTTAAAATGCTACGCA--------TTT---A--ATATAACT--C-TTA----ATGTCGAGCTT-C--ttg
gi|7 : ATTTCAGTAAAAT-GACGTATATCCTGTAGAAACAAGACC---ACTCTT-TATTGA--CATGTAAAC-TGTATTTTA-AAA----AAAGT------ACATAGTTTCTATAGGAGTGCATATGTC-tgccttcatttccacagtaaaactatatttcagtaaaatgacgtatatcctgtagaaacaagaccactctttattgacatgtaaactgtattttaaaaaaagtacatagtttctataggagtgcatatgtc
gi|8 : tgagatatctgttaaaaaatggggtagacgtcttgcgcaaacttaatttacgcctaaattagaggtcaaatgttcatgagctgctgacaatggaactataagagcttttaattctttaaatgtgaatcttgcatctttttttatatgttttcagacatgacagctgactttggcttctcattatgacggccaattttccattattaacatatttatgccacccgtaaaatgtgaccttagaaatgtttaagaacccatgcacatgacacaattacaaaaatataggtgttaaaagtatatttaaaatgctacgcatttaatataactcttaatgtcgagcttctgccttcatttccacagtaaaactatATTTAGCATATGTTT--ACGCTGTTAT----GTACTTC---AG-----A------TA---CGTTATATGATAG------CAG-CAAC---ACCCGACTTGAG-------------C----------C----------TAC----------CA----------G----TGTAAG---GATCATTTTTTATG--TC-AATATTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTTTACCGTTGCTTTAGAGGCATT--AGACGATCAATGTGCAT-AGTACACAAT---------T---AAAAAT-ATGGCT-T---TAAAA-G-----GTCTATTACAAACGCCACGCC------T-TTT---C--ATAT-ACT--T-CGA----ATTTCA-ACTTGA--AAA------T---TCT----CTTCTT--------------AA-TTATATAGCAAC----A--------TA--------CA--ACCAGTGTTT--AT-AACTGA-CTTGTTTCAAA--GTATGTAGCTTCAGTATAGTAT----AT-C-C-AAGT---ATA---------TACACTGTGTAGCTATTGAATA---ACTGTT-TATTGT--GATATAAAT-C-------ATGGA----TATATTG-CTGGTATCGTTACCATGGAAACGCGATTGTC-
gi|9 : TTTTCATCT-ATTGTTTA-TTACCTACAAGAAATTGGAGTTCAATATAAAACACCCATGTCTTGCCACCACTATTAGT----------------TT--TTT-ACTATAACTT-TACTAC---T---TCT-TAAGC---AGTTTT-TTCTTTGCA----TTTTGTACTCTTATGGCCTTTTGA--G-A-ATTAGTTAT-GCGATGCGGTACCCGTCTGGCACAAATCATTCTT-GC-CTTT-AAATGTTTAG---TCAGGAT-TTTG-TG--GACA---GCCTGTA------TGCC-----------AA-----------CTACATGAGA----AAGATCTTGCAATATGTTTCTAGCATCTTCTTTGATGCAG--------G----GC----------------------TGTT---TG-CAG------TAG-TTAC---A----------G-------------CCAACTTAGGTC----------TAC----------CA----------G----TGTGAG---GATCATCTCTGATG--TC----------------AA-AATTCTTGTACC-ATC----TGAAAACCTTTGCTCTCAACACATT--AGACGACCTATGT---TCATCACACAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): TCATTTTTATATAACTCTTAATTTCAAGATACACTTCTGCTTTCATTTTCACACTAAGTCCAGTAAAACGAATGTAGATCCAGTCCGAATTCATACACGAATTTTAATACAAATACGTGAATCTTGTAGATAAATTTCCATATATACCACTTTTAAAATAAATGT
Alignments
lowQualScore : 333333333333 1111 99999999999999999999999999999999999999999999 44444444444444444444 11 11 222 111 55555555555555555555555555555555555 1111111 2222222222222222 11 11 111111 1111111111 1 555555555555555555555555555555555555555 11111 111111111111 88888888888888888888888888888888888888888888888888888888888888888888888888888888 22222 33333333333 111111111111111111 1111111111 6666666666666666666666666666666666666666666666666666 1111 33333333333333333333333 111
lowQualScore : 33 999999999999 2222 22222222222222222222222222222222222222222222 0 4 4 777 88 4 999 55 1 77777777777777777777 5 11 44 11 1 0 3 1 0 111 444 88888888888888888888888888888888888 9999999 0 4444444444444444 1 1 33 5 11 1 000000 5 9999999 7777777777 5 7777 0 55 3 3 3 1 0 3 3 3 0 555 4 3 3 44 555 111111111111111111111111111111111111111 1 44444 6 0 1 3 0 5555 444 444444444444 777 444 2 777777 2 99999999999999999999999999999999999999999999999999999999999999999999999999999999 555 44 7 5 0 7 1 3 6666 11 1 555 1 0 33333 33 66 00000000000 3 888 3 555 1 3 77777 0 1 555555555555555555 5555 1 6666 2 33 3333333333 888 9999999999999999999999999999999999999999999999999999 44 2 44 3 1 1 3 2 8888 4 4444 4 444 4 0 888 3 44 3 99999999999999999999999 0 1 1 2 4 1 444
lowQualScore : .. ............ .... ............................................ . . . ... .. . ... .. . .................... . .. .. .. . . . . . ... ... ................................... ....... . ................ . . .. . .. . ...... . ....... .......... . .... . .. . . . . . . . . . ... . . . .. ... ....................................... . ..... . . . . . .... ... ............ ... ... . ...... . ................................................................................ ... .. . . . . . . .... .. . ... . . ..... .. .. ........... . ... . ... . . ..... . . .................. .... . .... . .. .......... ... .................................................... .. . .. . . . . . .... . .... . ... . . ... . .. . ....................... . . . . . . ...
lowQualScore : 11 333333333333 1111 77777777777777777777777777777777777777777777 1 0 0 000 88 9 000 55 0 77777777777777777777 6 44 44 00 4 8 2 4 8 222 000 00000000000000000000000000000000000 5555555 2 5555555555555555 0 0 88 8 00 5 999999 0 2222222 6666666666 5 7777 6 55 6 6 6 5 2 1 1 1 2 444 5 1 1 22 444 777777777777777777777777777777777777777 0 55555 0 5 4 6 6 3333 444 888888888888 888 444 5 222222 9 33333333333333333333333333333333333333333333333333333333333333333333333333333333 444 22 0 7 3 3 0 3 5555 99 4 000 4 2 33333 22 55 00000000000 1 222 1 444 5 1 77777 1 2 999999999999999999 4444 4 1111 9 99 3333333333 555 2222222222222222222222222222222222222222222222222222 66 8 66 3 0 9 3 5 5555 0 2222 5 888 7 2 555 1 22 1 99999999999999999999999 8 0 6 1 0 0 444
consensus : GCTGGACAACTTGGCTCTTGTNGGCAGT-GCAGC----TGCATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAAGG-TACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC---T---TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GC-----------TGCC-----------GA-----------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTAT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
Reference ( family-1287 ) : GCTGGACAACTTGGCTCTTGTNGGCAGT-GCAGC----TGCATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAAGG-TACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC---T---TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GC-----------TGCC-----------GA-----------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTAT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
gi|1 : GCTGGACAACTTGACGCTTGTGTGCAGT-GCAGC----AGCGTT----AT-------------C-------------ATGC-------------CTTGTAAACCAGTTGCTGGTCTTCTT-ATTT--ATAT---ACCT-GTTTGACCTTTTCCAAGACATTTTTTTTTTGTAAAAGTAACCAGTAACTGATTGACCATTATT--GA--TACAA-A-GTTGAATGACATGACCGGTGGAATTG--AATAATATCGAAAAAAAG-CACCTGTTTGA---TACTCC---------TGATGG---GTCT------------TCT-T---TTGGCCTTT---------------ATTATCAACCCGACGTTTGGGCTTGAAGTAAGACAGGAATGCTTCGTCACCAATA--AGTAAT--TCACATATGCATT--TTC-ACTACAATTT-TTATACATGTACGTCTTAAGC---A----T-TTGTTTACG---TTTTTACATTCCCATAGTCTTTTGG--GGA-ATCCGCTAA-GGGATAAGGTACCCATCTAGCACACATTTGTTTT-AC-TTTTCAGATGTTTGG---TCAGAAT-TGCG-TG--AACA----------------TGCC-----------AA-----------TTATAAAAGG----AAGATCTTGCAAGGTGTATATAGCATCTTATT-GATGCAGTTAT----GTACAGT---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TGC----------CA----------G----TATACG---GATTATCTTTGATG--TCTAAT-TTTCCATCTTTAA-ATTTTTTGTATC-ACC----TGTAAAATGTTGCTCTAAAGACATT--AGATGACCAATGAACATCATCACACAATTGAGAAAA-TGAGAAAAAT-ATAGTT-T---TACAA-G-----GTTTATGAAAAACGCTATGCA------T-TTT---A--ATTCAACC--T-CTA----ATTTCAGACTT-CAAAAA------A---TAT---CTTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTTT--AT-GACTGACCTAATTTCAAA-TAGATGTAACTTCGGTATTGTAT----AC-C-C-ATTTTCGTTAAAAT-TTCGTGCATT-TGTAGCTATTGAATA---ACTCTT-CCGTGT--GATATAAAC-CG----TTCCGAA----AACGTC--CAGGTGTAGTTTCTATCGAAACGCGTTCATC--AAAATA--GTGCCGATTGCCCCTCGTA
gi|10 : GCGCCAACATTATTT-ACGCCTT-A-ATGAGTGA---TCACCAT-CTCA-TA--AACT---GC-----------TGCC-----------GGTGAAATGCCAGCTATACGAGC----TAATTCATTCACTGTGTAGCTAGCATCTTCTTTGATGCAATTGT----GTGTAGA---TG-----A------TA---TGTT---TT-CAG------AAA-TGAA---A----------G-------------C----------T----------GACTTTGGCTTCCCA----------G----AATGAC---GGCCATCATTGAAG--TCCAAT-TTTCCACGATTAACATTT-TTATGCC-ACC----TGTAAAT-GT--------AAATGTT--TAAGGACCCATGTAC--C-TGACACAATTCAG---A-------AAAT-ATAGGT-T---TGAAA-G-----GTATATTTAAAACGCTACGCA------T-TTT---T--ATATAACT--C-ATT----ATTTCAAGCTT-C--GAATCTGCCT---TCA---CTTTCAC--------------AG-TAA----A--------A--------TA--------TG--ACCAGTGTAC---T-CACTGACCGCATTTCAAA-AGAATGTA
gi|11 : GCATCTTCCTTGATGCGGTGACTTTAATACTGC---AG-----T------AA---TAGA---TA-CAG------CCG-TGAT---T----------G-------------C----------C----------GCC----------CAAGACATAACTG----TACGAA---GCTCGTCTTTCGTG--TCCATT-TCTTTATCATTAA-ATTTCTCACATC-ACC----AATAAACTGTAGCCATAGGCGCGTC--TGAAGGCCCATAAACAGCA---CAAAGTTCAG---A-------AAAC-AT--CT-T---AACAC-G-----GCATA---------------------------------ATATAAAC--C-CGA----ATTTCAGA-TT-C--AAA------T---CGT---CCCTCAT--------------AAGT------GTAGCAAA-A--------TA--------TT--ACCAGTGTAT--AC-GACTGACCGTATTTC-AA-TGCATGCAATGTTGGTATTATGT----GA-C-T-GAATACCACCAAATGTTCGTGCAATGT-TAGATAATCAATAC--AC-CTT-TACTGC--AATATAACCACG----TTACGTA----A
gi|12 : cATAC---T---TCAGAAGC-----------TTTATGCG---TTTT-GTACTCCGGTGGCCTCTTAA--G-A-ATCA-TTACCGAGCTGAGGTACCCATCGAGCACAAACCTTTTAT-AC-CTTT-AGCGGTTTAG---TCAGGAT-TTCGTTGTCAATA---GA-----------TACT-----------GA-----------CTAAAACAGA----AAGTTTTTGTAAGGTGTATCTAGCATAATCTTTGTTGATGTTAT----ATACTGTATAAGTGTTTA------TAAG-TGTT---TG-AAG------AAG-TAAC---AATAGACTTAGG-------------C----------G----------TTC----------CA----------A----TGAAAG---GACTATCTTTGATT--TATTTT-TTTCCGTCTTTAA-ATGTTTTTTACC-ATC----TGTAAACCGTTGCTCTAGCGAAATT---GACGACCGATGTA---CATCACACAATTCAG---AGT-------AT-ATAACT-T---TACAA-G-----GTATATCTAAAA
gi|13 : aGTCACCAGTA--AGCAAT--TCAATTATCCGTT--TTA-ACTACAGTTT-TTATAC---T---TTTAAAGC---A-------------------TTTTGTACTCTCGTG
gi|13 : ATCTAGCATCTTCTTTGATGCAGTT----------TGC---AA---------------------------CAG------TAA-TAAC---C----------GACATGGTACTACTC----------C----------TAC----------TA----------G----AGTGAG---GATCATGTTTGATG--TCAAAT-ATTCCATtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagatctagcatcttctttgatgcagtttgcaacagtaataaccgacatggtactactcctactagagtgaggatcatgtttgatgtcaaatattccat
gi|14 : gtcaccagtaagcaattcaattatccgttttaactacagtttttatacttttaaagcattttgtactctcgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagCATGTTCGTT--TTTTATTACAATGT-TTATAC---T---TCTAAAGCTGTA----T-TTTTAGGAG---TTTT-GTACTTACTAGGCCGTTTGT--T-A-ATCAATTAA-GAGATGAGGTAGACTTTTAGCAGAAATCATTTTT-AC-CTTT-ACATGTTTAG---TCAAGAT-TTCG-TG--AACA---GC-----------TGC
gi|14 : TCTTTGATGCAGTAAT----GTTCTGC---AA-----A------TA---TGTT---GA-CAT------CAA-TAAC---A----------GCCGTACTGGA---C----------C----------TAC----------CA----------G----TGTGAT---GATCATCTTTGATGACTCAAATGTTTCCatctttgatgcagtaatgttctgcaaatatgttgacatcaataacagccgtactggacctaccagtgtgatgatcatctttgatgactcaaatgtttccgatttgtttccccccttatattatttattgtttttttaaacg
gi|15 : catgttcgttttttattacaatgtttatacttctaaagctgtatttttaggagttttgtacttactaggccgtttgttaatcaattaagagatgaggtagacttttagcagaaatcatttttacctttacatgtttagtcaagatttcgtgaacagctgcaAACACCACGTGGCATTAT-TGT---A--ATATAAAT--C-CTA----ATTTTTAGCTT-G--AA-----------TCTG--CCTTCATTTTCAC--------AG-T------A--------AAA------TA--------TG--GCCAGTGTACTCAT-AA---ATCGCTTTTCAAA-TAAATGTAAATGTGGT-CCGAAT----GCAC-G-GATTTCAAAAAAGT-TACGTTCATCTCGTA--TATC-AACAGCCACTCTTGTTTTGG--CATGTAGAT-CGCGT-TTA--AA----AACA-----ATGTAAAGTATCGATAGGAGCGCATTTATC-TAAAAAAATGTTCCGTTTGCCTCTTGTAgatttgtttccccccttatattatttattgtttttttaaacg
gi|16 : -A-ATCAGTTAA-GAACTTAGGTGCCAATCTAGCACAAATCATTTGT-AC-CTTT-AGATGTTTAG---TC---------G-CA--AATA---GC-----------TGCC-----------GA--------------TAAGATGCC--AAGGTATTGCAAGGTGTATCTAGCACCTTATTTGATGCAGTTAT----GTACTGC---AG-----ATACTAGTA---TGTT---TG-CAG------t
gi|16 : tctttggccttgtgttgtcccattgttatcagtt----TGTAAACCGTTTCTTTATAGACATT--AGACGTCCCATGTACAT-A--ACATATTTCAG---A-aattatttgcatgtaaaccgtttctttatagacattagacgtcccatgtacataacatatttcagaa
gi|17 : tctttggccttgtgttgtcccattgttatcagttaatcagttaagaacttaggtgccaatctagcacaaatcatttgtacctttagatgtttagtcgcaaatagctgccgataagatgccaaggtattgcaaggtgtatctagcaccttatttgatgcagttatgtactgcagatactagtatgtttgcagaattatttgca-------------ATAC-------------CTCGCAATTCAGTTGCTGGTCATCTT-TATG-CATTT---ACCT-ATTTGACTGGTATTAACACAGAAATTTT--GTACAAGTTACCAGTAATTGATCGAGCATTTGT--GG--TA-GGAA-TTTGAATGACA---------GAACTG--AAGAATAT-GAGTAGA-G-TATGTTTTTGGCATTACTCAAATGTTTGGCAATAATTTATCT------------TCT-T---T-GACCTTTTa
gi|18 : attcagaaattatttattatcttgcagaaggcatTTACAACGCTATGCA------T-TTT---G--GTATAATC--T-CTA----ATTTCCGATTT-T--AAA------T---TCT---CCTTTAT--------------TA-T------A--------A------------------CA--AC------AT--ATCGAC-GACCTTGTTCCAAA-TGAATGCAGCATCGGTATTGTTT----AC-T-A-TATTTCGGTAGAAG-TGCGTGCATTTTGTAGCTGTTCAATA---GCTCTT-TTTTAT--GATTTAAAC-AG----TATCG------AACTTG--CAGGTATAGTTTCTATGGAACCGCtt
gi|19 : ACAGTTCAG-----T---AAATAT-ATG----T---TAAAG-G-----ACATGTCTGAAACCCTGAGCA------TCTTT---T--ATATAAAC--C-CGA----ATTTCAGATTG-C--AAG------T---TTC---TCATCAT--------------TA-T------A--------G--------CAAAG-----TGGTATCAGTGTTT--TT-TACTGATTGTATTCCAAA-TGAA--CAACTCTAGTATTaat
gi|2 : ttaataaaccgtgtcccaaaGCTGGGCAATTTGGCTCTTG--GGGA----CAAC----TACATT----AC-------------C-------------ATGCAGGAAGCA-----CATGCTAACAAGTCGTT----TTCTT-TTT---ATAT---AGAT--TCCAACTGTTT----GATA---TTTTT--GTAAATGTTACCAATAATATATCGAGCATT--ttctgaacaattcccac
gi|2 : AT--TCACATATTCGTT------ACTACAATTT-TTATAC---T---TCTGCAAT---A----T-TTTCTTTCGCTTTTTTTGTATGCTCGTGGCCTTTTGG--G-A-ATCAGCTAA-GAAATGAGGTACCCATCTAGCGCAGATATGTTT--AC-CTTT-TGATGATAAG---TAAGAAT-TTTG-T---AACA---AC-----------TGCC-----------GATAAGATGCCAACTATATGAGG----AAGAT-------------------------TTTGATGCAGTAAC----GAACTGC---AG-----A------TA---TGTT---TG-CAG------CAA-TAGC---A----------G-------------C----------CAACGTGGACCTAC----------CG----------C----TTTCAG---GTTCATCGTCGATG--TCAAAT-TTGCCATCTTTAA-ATACCTTGTCCC-ATC----TGTAAACCGTTGCTCTGGAGACATT--TCATGGCCCATGTA---TATCACACAAT---A---A-C---GAAAAT-ATAATT-T---TACAATGTACATGTATATTTAAAACGCTACACG------T-TTT---G--ACATTACC--TATTA----ATTT-AGACTT-C--AAA------T---TCT---CCTTCAC--------------AA-T------GATAACAAAA--------TA--------CG--ATCAGTGTAC--AT-GACTGGCCTT-TTTCAAA-TGCATGTAACTTCGGTTTTAAAT----AC-C-CAAATTGCGATAAAAT-TTCGTGCATTTTGTAGCTATTGAATA---ACTCGT-TAGTGT--GATGTAAAC-CG----TTGCGAC----ATTG----CAGGTATAATTTTTATGAAAACGCGTTCGTCTTAAAATA----TCCGTTTaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcacatattcgttactacaatttttatacttctgcaatattttctttcgctttttttgtatgctcgtggccttttgggaatcagctaagaaatgaggtacccatctagcgcagatatgtttaccttttgatgataagtaagaattttgtaacaactgccgataagatgccaactatatgaggaagattttgatgcagtaacgaactgcagatatgtttgcagcaatagcagccaacgtggacctaccgctttcaggttcatcgtcgatgtcaaatttgccatctttaaataccttgtcccatctgtaaaccgttgctctggagacatttcatggcccatgtatatcacacaataacgaaaatataattttacaatgtacatgtatatttaaaacgctacacgttttgacattacctattaatttagacttcaaattctccttcacaatgataacaaaatacgatcagtgtacatgactggcctttttcaaatgcatgtaacttcggttttaaatacccaaattgcgataaaatttcgtgcattttgtagctattgaataactcgttagtgtgatgtaaaccgttgcgacattgcaggtataatttttatgaaaacgcgttcgtcttaaaatatccgttttg
gi|21 : gctgggcaatttggctcttggggacaactacattaccatgcaggaagcacatgctaacaagtcgttttctttttatatagattccaactgtttgatatttttgtaaatgttaccaataatatatcgagcattaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGGACAACTTCGCTCTTGTTGGCAG------C----TGCATT----AT-------------CGTTCAGGAAGCATATGT-------------ATCGCAAACCAGTTGCTGGTTTTCTT-TTTTCCATAT---ACCT--TTTAACCCTTTTCAAGACAGGTTCTTT--GTAAACGTTACCCGTAATGGATCGACtg
gi|22 : CAG---A-A---AAAGA--AT---T-T---TACAC-G-----GTATATTTTAAAAGCAACGCT------T-TTTTATATTATATAATT--C-CTA----ATTTCAAGCTT-C--AAA------TCTATCTTCATCTTCAG--------------AG-TAA----A--------A--------TA--------TG--GCCAGTGT-T--CT-TACTGACCATATTTGAAA-TGAAT
gi|23 : TATCTAGCAAATAATTTGATGTAATTGT----TCACAGC---TG-----A------AA---GGTT---TT-CAGGAAAGACAGATGAC---GTTG-------G-------------T----------C----------TCC----------TA----------G----AATGAT---GATCATCTTTGATG--TACAAT-TTTCCAa
gi|24 : cttattacttctttattTT--GTAAAACTTACCAGTAACAGATCGACCATT--T--GGAATA-AG-A-T--------CAGAACCACTCGAATTA--AAAA--AGCGTGTAAAG---AACTTTCTGG---TACTCctatcatttttat
gi|25 : CTGGACAACTTGGCTCATGTGG------GCAGC----TGCATT----ATCGTGCAGGAGGCAC-------------ATGC-------------TTGGCAAACAAGCTGCTGTTTTTTTTGTTTT-CACAT---AACT-GTTCGATTTTTT---AGACAgttgaaagcttagcaatacttggtatttcttgtcct
gi|26 : TCGTGCACTGTGTAGCTATTGAATA---GCTGTT-TATTGT--GCTATAAAT-CT----TTAC--A----AATTTA--CAGGTAAAGTTGCCATGTTAGCACTTTTGTC-TAAATGA--ATT-CGATTGCCCct
gi|27 : aGCATTGTGTAACTATTGGATA---ATTATT-TATTATTATATATAAAA-TG----TTACGAA----TCTG----CAGGTATAGTTTCCACGG------------C-TAAATAA--ATTCCGATTGCCGCTTGat
gi|28 : CGCAAAAT-GTTGCTAGTCTTCTT-TTTT-CATCT---ACCT-ATTTCATTTTTTTCAAGACAGAGTTTTT--GTGAAAGTTACCAGCGATTGATCGACCAT
gi|29 : GTTATTGATCTTTAT-ATTT-CATATTTCACTT-GTTTGATTATTTTCAAGACCGACTTTGT--GTAAACGTTACCAGTAATT
gi|3 : GCTAGACAACTTGGTTCTTACGGGCAGT----------TGCATT----AT-------------CTTGAGGCAA----ATTC-------------CTCGCAAACCAGTTGCTGGTTTTCTT-TTTT-CATTT---ACCT-GTTTGACATTTTTCAAGACAGAGTTTTT--GGAAAAGTTACCAGTAATTGACCGACC-----------------------GAATAACACGACCGCTTTATTTT--ATGAATATCAAGTAAAG--TACCTTTTTTG---TACTCCA--------CGA-GA---GTCTGGCAATATTTAATCT-TCGTT-GGCNNNNNNNNNN-NN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NNNNNTCCTCACATATTTGTTGTTTT-ATT-TAATTT-TTATAC---T---TTTGAAGC---A----G-TTTTTTCC-----CTTTGTACTCACGTGGCCTTTTGG--G-A-ATCAGTTAA-GT--TAAGGTACCCATCCATCACACATCTTTTTTTAA-CTTT-AGATGTTTAG---TCAGGAA-TTCT-TG--AACA---GC-----------TACCTATGAGATGTCAA-----------CAATAGAAGA----AAGATCGTGCAACGTATATATAGCATCTTTTTT-ATACAGTTAT----GTACTGT---AG-----A------TA---TGTT---TG-CAG------TAG-TAAT---A----------GCTGACCTTGA---C----------C----------TAC----------CA----------G----TGTGcaaacgacag
gi|3 : CTTG-ACCTACCAGTGTGTCAAATTTTGCTCCAGAGACACT--ACACGACCCTCG---AGCATCACACAATTCAG---A--------AATGATAGCT-T---TACAG-G-----TTATTTTTAAAAC------------------------------ACC--T-C------ACTTC----CT-C--AAA------TAT-TCT---CCTTCAA--------------AA-T------G--------A--------TAACAAACTTCG--CTCTGTGTGT--AT-GACTTACCTTTTGTCAAAATGAATGTAACTTCGGTATTGTGT----AC-C-A-AAATTCGATAAAAT-TTCATGAATTGTGTGGCTATTGAATA---ACCTTT-TATTGT--GAATTAAAT-CG----TTACGG--------GTTTGCAGATAGAGTTTCAATGAAAACGCGTTtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|30 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgacAGTTGTTGATCTTTTT-TCTT-CATAT---ATAC-ATTTGACTTTTTTCAAGATATAACTTTT--GT-AACGCTACCAGTAATTGATCGACCAt
gi|31 : ATGCGGTTTCCATCTAGCACAAATCTTTTTC-AT--------ATGTTTAT---TCAGGAT-TTTG-TG--AACA---GC-----------TGCT-----------G--------------ATAAGA
gi|32 : GCTGGACAAGTTGGCTGTAATTAGCAGTTGCAGTATCATGCATTCGGCGT---------------------------ACGC-------------CTCGCAAACGAGTTGCtgcctt
gi|33 : tGTATAGTTTCCATGGGAGCGTGTGTGTC-TAAAACC--TTTCCGATTGCCCCTCGCA
gi|4 : aAGCTTGACTCTTGTTGGCAGT----------TGTATT----AT-------------C-------------ATGCAGGAGAAACATGCCTCGTAAACCAGTTGATGGTCTTCTT-ATAC-CACAT---ACCTTGTTTGACCTTTAACAAGACATA-TTTTT--GTAAATGTTACCAGTAATTGATCGGCCATT--TTGGG--TA-AA-ATTTTGAATG--ACTACCGCGGGAACTGAAAAAAATATTGTGT--AGGTTACCTTTTTTG---CA----A--------TGATTA---GTCT------------TCTGT---T-GTCTTTTTCGTCTAAT-GTTTAATTATCATACCGACGTTGGGACTCGAAATAAAACACCAATGTATTc
gi|4 : actCAATGTATTAAAC---T---TCTGAAAC---A----C-TCGTT-GCG---TTTT-ATACTTTCGTGGCCTTTTGG--G-A-ATCATTTGA-GAGATGAAGTACCTATCAAGCACAAATCTTATTT-AC-CTTC-AGATGTTTAG---T-------------G--AAAA---GC-----------TGCC-----------GA-----------TAAGATAAAA----GAGATCTCTCAAGGTGAACCTAACATCTTCTTTGATGCAACCAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------TAG-TAAC---A----------G-------------C----------C----------TAC----------TA----------AGGCTTACCAGCGCGATAATCTTTAATG--TCAAAT-TTTCCATCTTTAA-CTTTCTTGTACC-ATC----TATAAATTGTTGCTCAAGAGACATT--AGACGGCCCATGT---TCATCACATAATGCAG-----T---AAG--T-ATAGTT-T---TAGAA-A-----GTATATTTATATTGCCACGCG------T-TTT---A--A-------------A----A---CAGACTT-C--AAA------T---TCT---ACTTCAT--------------AA-C------G--------A--------TA--------aaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|4 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacacAACTTCGATTTTGTAT----AT-TAT-GATTGCGATAAAGT-TTCGTGCAGCGTGTAGCCATTGAAAA---ACTCTT-TATTTT--GTTATAAAC-CG----TT---AA----ATTGTG--CAGGTATAGTTTTCATGGAAGCGCATTTGCC-TAAAATA--TTTCCGATTGCCTCTCGTAacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|5 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataaca-ACAACAATGT-TTATAT---G---TCTGTAGC---A----T-GTTTTGGCG---TTTTTA-GCTCTCGTGG--TTTTAGTGG-A-ATCAGTTAA-GAGATGAGGTACCAATCTAGCAT---------------CTGT-AGATGTCTAT---TCAGAAT-TTCG-TG--AATATCTGCCAATGAGA---TGCC-----------AA-----------CTAAATGAGA----AAGATCTTGCAAGGTTTATCTAGCATCTTCTTTGATGTAGTCAT----GTACTGC---AG-----T------TA---TGTT---TC-AAG------CAA-AAAC---A----------A-------------C----------CGACTTTAGCGTAC----------CA----------G----TGTGAG---GAATATCTTTGATG--TAAAAT-TGTCCATCTTTAA-ATTTCGTGTGTC-ATC----CGTAAATTGTTGCTCTATAGACATA--AGATA---CAT-TACATCAT-AC---ATT--G---A-A---GAAAAT-ATAGCT-T---TACAA-G-----ATATG-------------------------TT---A--ATATAACC--T-CTA----ATTTCAGACTT-A--ACG------T---TTT---CCTTCAT--------------GA-T------G--------ATAACAAAGTA--------CG--ACCAGTGTAT--AT-GACTAACCTAATTTCAAA-TGAATGTAACTTCGGTATTATAT----CC-C-C-AATTGCGATAAAAT----GT-CATTATGTAGCTATTAAAAA---ACTCTT-TACTGT--GAAATAAAT-CG----CTACAAATTTGAATG-----AAG---AGTTTCTATGGAATCGCGTTCGTC-cc
gi|6 : aTGCAGC---A----TATCTTTGGCG---TTTT-GTATTCTCGTGACCTTTAGG--T-A-ATCAGCTAA-GTGATGAGGTACCTATCTAGAACA----TTTTAA-AT-ATTT-AGATGTTAAG---TCAAAAT-TTCG-TG--AAAA---ACTGTCGATAAGATGCC-----------AA-----------CTATATGAGG----AAG---------------------ATCTTCCTTAATGTCGATAT----GTACTGC---AG-----AT-----TATTTTGTT---TG-CAG------CA
gi|6 : tAT-TTTTCATCTTTCA-ATT-CTTGTACC-ACC----TGTTAATCGTTGCT--AGAGACATT--AGACGAACTGTGT---TAATCACA------AG---A-------AAAT-GTA--T-TATATACAA-G-----GTCTATTTAAAACGCTACACG------T-TTA---G--ATATA-CTTTC-TTATTTCATTTCAGACTT-C--AAA------T---TCC---CCT-CATTAATAATAACAACCAA-T------A--------A--------CA--------AG--ACCAGTGTAT--AT-GACTGACAGTATATCAAA-TAAATGTAACTTCTGTTTTGTATGTATAT-C-A-CATGGCGATAAAAG-TTTGAATATCTTGTAGGTATTGAATA---ATTCTT-TATTAT--AATATAAAC-CG----TTACGAA----Atttttcatctttcaattcttgtaccacctgttaatcgttgctagagacattagacgaactgtgttaatcacaagaaaatgtattatatacaaggtctatttaaaacgctacacgtttagatatactttcttatttcatttcagacttcaaattcccctcattaataataacaaccaataacaagaccagtgtatatgactgacagtatatcaaataaatgtaacttctgttttgtatgtatatcacatggcgataaaagtttgaatatcttgtaggtattgaataattctttattataatataaaccgttacgaaattg
gi|7 : ttgcagcatatctttggcgttttgtattctcgtgacctttaggtaatcagctaagtgatgaggtacctatctagaacattttaaatatttagatgttaagtcaaaatttcgtgaaaaactgtcgataagatgccaactatatgaggaagatcttccttaatgtcgatatgtactgcagattattttgtttgcagcTGA--G-ATATCTGTTAA-AAAATGGGGTAGACGTCTTGCGCAAACTTAATTT-AC-GCCT-AAAT---TAGAGGTCAA-ATGTTCA-TG--AGCT---GC-----------TGAC-----------AATGGAA------CTATAAGAGCTTTTAAT-TCTTTAAATGTGAATCTTGCATCTTTTTTTAT------AT----GT-TTTC---AG-----A------CA---TG------A-CAG------C---TGACTTTG----------G-------------C----------T----------T------------C---------------------------TCAT-TATGACG--GCCAAT-TTTCCATTATTAACATAT-TTATGCC-ACC----CGTAAAATGTGACCTTAGAAATGTTTAAGA--ACCCATGCA---CATGACACAATT------A-C---AAAAAT-ATAGGTGT---TA-AA-A-----GTATATTTAAAATGCTACGCA--------TTT---A--ATATAACT--C-TTA----ATGTCGAGCTT-C--ttg
gi|7 : ATTTCAGTAAAAT-GACGTATATCCTGTAGAAACAAGACC---ACTCTT-TATTGA--CATGTAAAC-TGTATTTTA-AAA----AAAGT------ACATAGTTTCTATAGGAGTGCATATGTC-tgccttcatttccacagtaaaactatatttcagtaaaatgacgtatatcctgtagaaacaagaccactctttattgacatgtaaactgtattttaaaaaaagtacatagtttctataggagtgcatatgtc
gi|8 : tgagatatctgttaaaaaatggggtagacgtcttgcgcaaacttaatttacgcctaaattagaggtcaaatgttcatgagctgctgacaatggaactataagagcttttaattctttaaatgtgaatcttgcatctttttttatatgttttcagacatgacagctgactttggcttctcattatgacggccaattttccattattaacatatttatgccacccgtaaaatgtgaccttagaaatgtttaagaacccatgcacatgacacaattacaaaaatataggtgttaaaagtatatttaaaatgctacgcatttaatataactcttaatgtcgagcttctgccttcatttccacagtaaaactatATTTAGCATATGTTT--ACGCTGTTAT----GTACTTC---AG-----A------TA---CGTTATATGATAG------CAG-CAAC---ACCCGACTTGAG-------------C----------C----------TAC----------CA----------G----TGTAAG---GATCATTTTTTATG--TC-AATATTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTTTACCGTTGCTTTAGAGGCATT--AGACGATCAATGTGCAT-AGTACACAAT---------T---AAAAAT-ATGGCT-T---TAAAA-G-----GTCTATTACAAACGCCACGCC------T-TTT---C--ATAT-ACT--T-CGA----ATTTCA-ACTTGA--AAA------T---TCT----CTTCTT--------------AA-TTATATAGCAAC----A--------TA--------CA--ACCAGTGTTT--AT-AACTGA-CTTGTTTCAAA--GTATGTAGCTTCAGTATAGTAT----AT-C-C-AAGT---ATA---------TACACTGTGTAGCTATTGAATA---ACTGTT-TATTGT--GATATAAAT-C-------ATGGA----TATATTG-CTGGTATCGTTACCATGGAAACGCGATTGTC-
gi|9 : TTTTCATCT-ATTGTTTA-TTACCTACAAGAAATTGGAGTTCAATATAAAACACCCATGTCTTGCCACCACTATTAGT----------------TT--TTT-ACTATAACTT-TACTAC---T---TCTTAAGC---AGTTTT-TTCTTTGCA----TTTTGTACTCTTATGGCCTTTTGA--G-A-ATTAGTTAT-GCGATGCGGTACCCGTCTGGCACAAATCATTCTT-GC-CTTT-AAATGTTTAG---TCAGGAT-TTTG-TG--GACA---GCCTGTA------TGCC-----------AA-----------CTACATGAGA----AAGATCTTGCAATATGTTTCTAGCATCTTCTTTGATGCAG--------G----GC----------------------TGTT---TG-CAG------TAG-TTAC---A----------G-------------CCAACTTAGGTC----------TAC----------CA----------G----TGTGAG---GATCATCTCTGATG--TC----------------AA-AATTCTTGTACC-ATC----TGAAAACCTTTGCTCTCAACACATT--AGACGACCTATGT---TCATCACACAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): TCATTTTTATATAACTCTTAATTTCAAGATACACTTCTGCTTTCATTTTCACACTAAGTCCAGTAAAACGAATGTAGATCCAGTCCGAATTCATACACGAATTTTAATACAAATACGTGAATCTTGTAGATAAATTTCCATATATACCACTTTTAAAATAAATGT
Alignments
lowQualScore : 333333333333 1111 99999999999999999999999999999999999999999999 44444444444444444444 11 11 222 111 55555555555555555555555555555555555 1111111 2222222222222222 11 11 111111 1111111111 1 555555555555555555555555555555555555555 11111 111111111111 88888888888888888888888888888888888888888888888888888888888888888888888888888888 22222 33333333333 111111111111111111 1111111111 6666666666666666666666666666666666666666666666666666 1111 33333333333333333333333 111
lowQualScore : 33 999999999999 2222 22222222222222222222222222222222222222222222 0 4 4 777 88 4 999 55 1 77777777777777777777 5 11 44 11 1 0 3 1 0 111 444 88888888888888888888888888888888888 9999999 0 4444444444444444 1 1 33 5 11 1 000000 5 9999999 7777777777 5 7777 0 55 3 3 3 1 0 3 3 3 0 555 4 3 3 44 555 111111111111111111111111111111111111111 1 44444 6 0 1 3 0 5555 444 444444444444 777 444 2 777777 2 99999999999999999999999999999999999999999999999999999999999999999999999999999999 555 44 7 5 0 7 1 3 6666 11 1 555 1 0 33333 33 66 00000000000 3 888 3 555 1 3 77777 0 1 555555555555555555 5555 1 6666 2 33 3333333333 888 9999999999999999999999999999999999999999999999999999 44 2 44 3 1 1 3 2 8888 4 4444 4 444 4 0 888 3 44 3 99999999999999999999999 0 1 1 2 4 1 444
lowQualScore : .. ............ .... ............................................ . . . ... .. . ... .. . .................... . .. .. .. . . . . . ... ... ................................... ....... . ................ . . .. . .. . ...... . ....... .......... . .... . .. . . . . . . . . . ... . . . .. ... ....................................... . ..... . . . . . .... ... ............ ... ... . ...... . ................................................................................ ... .. . . . . . . .... .. . ... . . ..... .. .. ........... . ... . ... . . ..... . . .................. .... . .... . .. .......... ... .................................................... .. . .. . . . . . .... . .... . ... . . ... . .. . ....................... . . . . . . ...
lowQualScore : 11 333333333333 1111 77777777777777777777777777777777777777777777 1 0 0 000 88 9 000 55 0 77777777777777777777 6 44 44 00 4 8 2 4 8 222 000 00000000000000000000000000000000000 5555555 2 5555555555555555 0 0 88 8 00 5 999999 0 2222222 6666666666 5 7777 6 55 6 6 6 5 2 1 1 1 2 444 5 1 1 22 444 777777777777777777777777777777777777777 0 55555 0 5 4 6 6 3333 444 888888888888 888 444 5 222222 9 33333333333333333333333333333333333333333333333333333333333333333333333333333333 444 22 0 7 3 3 0 3 5555 99 4 000 4 2 33333 22 55 00000000000 1 222 1 444 5 1 77777 1 2 999999999999999999 4444 4 1111 9 99 3333333333 555 2222222222222222222222222222222222222222222222222222 66 8 66 3 0 9 3 5 5555 0 2222 5 888 7 2 555 1 22 1 99999999999999999999999 8 0 6 1 0 0 444
consensus : GCTGGACAACTTGGCTCTTGTNGGCAGT-GCAGC----TGCATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAAGG-TACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC---T---TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GC-----------TGCC-----------GA-----------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTAT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
Reference ( family-1287 ) : GCTGGACAACTTGGCTCTTGTNGGCAGT-GCAGC----TGCATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAAGG-TACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC---T---TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GC-----------TGCC-----------GA-----------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTAT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
gi|1 : GCTGGACAACTTGACGCTTGTGTGCAGT-GCAGC----AGCGTT----AT-------------C-------------ATGC-------------CTTGTAAACCAGTTGCTGGTCTTCTT-ATTT--ATAT---ACCT-GTTTGACCTTTTCCAAGACATTTTTTTTTTGTAAAAGTAACCAGTAACTGATTGACCATTATT--GA--TACAA-A-GTTGAATGACATGACCGGTGGAATTG--AATAATATCGAAAAAAAG-CACCTGTTTGA---TACTCC---------TGATGG---GTCT------------TCT-T---TTGGCCTTT---------------ATTATCAACCCGACGTTTGGGCTTGAAGTAAGACAGGAATGCTTCGTCACCAATA--AGTAAT--TCACATATGCATT--TTC-ACTACAATTT-TTATACATGTACGTCTTAAGC---A----T-TTGTTTACG---TTTTTACATTCCCATAGTCTTTTGG--GGA-ATCCGCTAA-GGGATAAGGTACCCATCTAGCACACATTTGTTTT-AC-TTTTCAGATGTTTGG---TCAGAAT-TGCG-TG--AACA----------------TGCC-----------AA-----------TTATAAAAGG----AAGATCTTGCAAGGTGTATATAGCATCTTATT-GATGCAGTTAT----GTACAGT---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TGC----------CA----------G----TATACG---GATTATCTTTGATG--TCTAAT-TTTCCATCTTTAA-ATTTTTTGTATC-ACC----TGTAAAATGTTGCTCTAAAGACATT--AGATGACCAATGAACATCATCACACAATTGAGAAAA-TGAGAAAAAT-ATAGTT-T---TACAA-G-----GTTTATGAAAAACGCTATGCA------T-TTT---A--ATTCAACC--T-CTA----ATTTCAGACTT-CAAAAA------A---TAT---CTTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTTT--AT-GACTGACCTAATTTCAAA-TAGATGTAACTTCGGTATTGTAT----AC-C-C-ATTTTCGTTAAAAT-TTCGTGCATT-TGTAGCTATTGAATA---ACTCTT-CCGTGT--GATATAAAC-CG----TTCCGAA----AACGTC--CAGGTGTAGTTTCTATCGAAACGCGTTCATC--AAAATA--GTGCCGATTGCCCCTCGTA
gi|10 : GCGCCAACATTATTT-ACGCCTT-A-ATGAGTGA---TCACCAT-CTCA-TA--AACT---GC-----------TGCC-----------GGTGAAATGCCAGCTATACGAGC----TAATTCATTCACTGTGTAGCTAGCATCTTCTTTGATGCAATTGT----GTGTAGA---TG-----A------TA---TGTT---TT-CAG------AAA-TGAA---A----------G-------------C----------T----------GACTTTGGCTTCCCA----------G----AATGAC---GGCCATCATTGAAG--TCCAAT-TTTCCACGATTAACATTT-TTATGCC-ACC----TGTAAAT-GT--------AAATGTT--TAAGGACCCATGTAC--C-TGACACAATTCAG---A-------AAAT-ATAGGT-T---TGAAA-G-----GTATATTTAAAACGCTACGCA------T-TTT---T--ATATAACT--C-ATT----ATTTCAAGCTT-C--GAATCTGCCT---TCA---CTTTCAC--------------AG-TAA----A--------A--------TA--------TG--ACCAGTGTAC---T-CACTGACCGCATTTCAAA-AGAATGTA
gi|11 : GCATCTTCCTTGATGCGGTGACTTTAATACTGC---AG-----T------AA---TAGA---TA-CAG------CCG-TGAT---T----------G-------------C----------C----------GCC----------CAAGACATAACTG----TACGAA---GCTCGTCTTTCGTG--TCCATT-TCTTTATCATTAA-ATTTCTCACATC-ACC----AATAAACTGTAGCCATAGGCGCGTC--TGAAGGCCCATAAACAGCA---CAAAGTTCAG---A-------AAAC-AT--CT-T---AACAC-G-----GCATA---------------------------------ATATAAAC--C-CGA----ATTTCAGA-TT-C--AAA------T---CGT---CCCTCAT--------------AAGT------GTAGCAAA-A--------TA--------TT--ACCAGTGTAT--AC-GACTGACCGTATTTC-AA-TGCATGCAATGTTGGTATTATGT----GA-C-T-GAATACCACCAAATGTTCGTGCAATGT-TAGATAATCAATAC--AC-CTT-TACTGC--AATATAACCACG----TTACGTA----A
gi|12 : cATAC---T---TCAGAAGC-----------TTTATGCG---TTTT-GTACTCCGGTGGCCTCTTAA--G-A-ATCA-TTACCGAGCTGAGGTACCCATCGAGCACAAACCTTTTAT-AC-CTTT-AGCGGTTTAG---TCAGGAT-TTCGTTGTCAATA---GA-----------TACT-----------GA-----------CTAAAACAGA----AAGTTTTTGTAAGGTGTATCTAGCATAATCTTTGTTGATGTTAT----ATACTGTATAAGTGTTTA------TAAG-TGTT---TG-AAG------AAG-TAAC---AATAGACTTAGG-------------C----------G----------TTC----------CA----------A----TGAAAG---GACTATCTTTGATT--TATTTT-TTTCCGTCTTTAA-ATGTTTTTTACC-ATC----TGTAAACCGTTGCTCTAGCGAAATT---GACGACCGATGTA---CATCACACAATTCAG---AGT-------AT-ATAACT-T---TACAA-G-----GTATATCTAAAA
gi|13 : aGTCACCAGTA--AGCAAT--TCAATTATCCGTT--TTA-ACTACAGTTT-TTATAC---T---TTTAAAGC---A-------------------TTTTGTACTCTCGTG
gi|13 : ATCTAGCATCTTCTTTGATGCAGTT----------TGC---AA---------------------------CAG------TAA-TAAC---C----------GACATGGTACTACTC----------C----------TAC----------TA----------G----AGTGAG---GATCATGTTTGATG--TCAAAT-ATTCCATtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagatctagcatcttctttgatgcagtttgcaacagtaataaccgacatggtactactcctactagagtgaggatcatgtttgatgtcaaatattccat
gi|14 : gtcaccagtaagcaattcaattatccgttttaactacagtttttatacttttaaagcattttgtactctcgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagCATGTTCGTT--TTTTATTACAATGT-TTATAC---T---TCTAAAGCTGTA----T-TTTTAGGAG---TTTT-GTACTTACTAGGCCGTTTGT--T-A-ATCAATTAA-GAGATGAGGTAGACTTTTAGCAGAAATCATTTTT-AC-CTTT-ACATGTTTAG---TCAAGAT-TTCG-TG--AACA---GC-----------TGC
gi|14 : TCTTTGATGCAGTAAT----GTTCTGC---AA-----A------TA---TGTT---GA-CAT------CAA-TAAC---A----------GCCGTACTGGA---C----------C----------TAC----------CA----------G----TGTGAT---GATCATCTTTGATGACTCAAATGTTTCCatctttgatgcagtaatgttctgcaaatatgttgacatcaataacagccgtactggacctaccagtgtgatgatcatctttgatgactcaaatgtttccgatttgtttccccccttatattatttattgtttttttaaacg
gi|15 : catgttcgttttttattacaatgtttatacttctaaagctgtatttttaggagttttgtacttactaggccgtttgttaatcaattaagagatgaggtagacttttagcagaaatcatttttacctttacatgtttagtcaagatttcgtgaacagctgcaAACACCACGTGGCATTAT-TGT---A--ATATAAAT--C-CTA----ATTTTTAGCTT-G--AA-----------TCTG--CCTTCATTTTCAC--------AG-T------A--------AAA------TA--------TG--GCCAGTGTACTCAT-AA---ATCGCTTTTCAAA-TAAATGTAAATGTGGT-CCGAAT----GCAC-G-GATTTCAAAAAAGT-TACGTTCATCTCGTA--TATC-AACAGCCACTCTTGTTTTGG--CATGTAGAT-CGCGT-TTA--AA----AACA-----ATGTAAAGTATCGATAGGAGCGCATTTATC-TAAAAAAATGTTCCGTTTGCCTCTTGTAgatttgtttccccccttatattatttattgtttttttaaacg
gi|16 : -A-ATCAGTTAA-GAACTTAGGTGCCAATCTAGCACAAATCATTTGT-AC-CTTT-AGATGTTTAG---TC---------G-CA--AATA---GC-----------TGCC-----------GA--------------TAAGATGCC--AAGGTATTGCAAGGTGTATCTAGCACCTTATTTGATGCAGTTAT----GTACTGC---AG-----ATACTAGTA---TGTT---TG-CAG------t
gi|16 : tctttggccttgtgttgtcccattgttatcagtt----TGTAAACCGTTTCTTTATAGACATT--AGACGTCCCATGTACAT-A--ACATATTTCAG---A-aattatttgcatgtaaaccgtttctttatagacattagacgtcccatgtacataacatatttcagaa
gi|17 : tctttggccttgtgttgtcccattgttatcagttaatcagttaagaacttaggtgccaatctagcacaaatcatttgtacctttagatgtttagtcgcaaatagctgccgataagatgccaaggtattgcaaggtgtatctagcaccttatttgatgcagttatgtactgcagatactagtatgtttgcagaattatttgca-------------ATAC-------------CTCGCAATTCAGTTGCTGGTCATCTT-TATG-CATTT---ACCT-ATTTGACTGGTATTAACACAGAAATTTT--GTACAAGTTACCAGTAATTGATCGAGCATTTGT--GG--TA-GGAA-TTTGAATGACA---------GAACTG--AAGAATAT-GAGTAGA-G-TATGTTTTTGGCATTACTCAAATGTTTGGCAATAATTTATCT------------TCT-T---T-GACCTTTTa
gi|18 : attcagaaattatttattatcttgcagaaggcatTTACAACGCTATGCA------T-TTT---G--GTATAATC--T-CTA----ATTTCCGATTT-T--AAA------T---TCT---CCTTTAT--------------TA-T------A--------A------------------CA--AC------AT--ATCGAC-GACCTTGTTCCAAA-TGAATGCAGCATCGGTATTGTTT----AC-T-A-TATTTCGGTAGAAG-TGCGTGCATTTTGTAGCTGTTCAATA---GCTCTT-TTTTAT--GATTTAAAC-AG----TATCG------AACTTG--CAGGTATAGTTTCTATGGAACCGCtt
gi|19 : ACAGTTCAG-----T---AAATAT-ATG----T---TAAAG-G-----ACATGTCTGAAACCCTGAGCA------TCTTT---T--ATATAAAC--C-CGA----ATTTCAGATTG-C--AAG------T---TTC---TCATCAT--------------TA-T------A--------G--------CAAAG-----TGGTATCAGTGTTT--TT-TACTGATTGTATTCCAAA-TGAA--CAACTCTAGTATTaat
gi|2 : ttaataaaccgtgtcccaaaGCTGGGCAATTTGGCTCTTG--GGGA----CAAC----TACATT----AC-------------C-------------ATGCAGGAAGCA-----CATGCTAACAAGTCGTT----TTCTT-TTT---ATAT---AGAT--TCCAACTGTTT----GATA---TTTTT--GTAAATGTTACCAATAATATATCGAGCATT--ttctgaacaattcccac
gi|2 : AT--TCACATATTCGTT------ACTACAATTT-TTATAC---T---TCTGCAAT---A----T-TTTCTTTCGCTTTTTTTGTATGCTCGTGGCCTTTTGG--G-A-ATCAGCTAA-GAAATGAGGTACCCATCTAGCGCAGATATGTTT--AC-CTTT-TGATGATAAG---TAAGAAT-TTTG-T---AACA---AC-----------TGCC-----------GATAAGATGCCAACTATATGAGG----AAGAT-------------------------TTTGATGCAGTAAC----GAACTGC---AG-----A------TA---TGTT---TG-CAG------CAA-TAGC---A----------G-------------C----------CAACGTGGACCTAC----------CG----------C----TTTCAG---GTTCATCGTCGATG--TCAAAT-TTGCCATCTTTAA-ATACCTTGTCCC-ATC----TGTAAACCGTTGCTCTGGAGACATT--TCATGGCCCATGTA---TATCACACAAT---A---A-C---GAAAAT-ATAATT-T---TACAATGTACATGTATATTTAAAACGCTACACG------T-TTT---G--ACATTACC--TATTA----ATTT-AGACTT-C--AAA------T---TCT---CCTTCAC--------------AA-T------GATAACAAAA--------TA--------CG--ATCAGTGTAC--AT-GACTGGCCTT-TTTCAAA-TGCATGTAACTTCGGTTTTAAAT----AC-C-CAAATTGCGATAAAAT-TTCGTGCATTTTGTAGCTATTGAATA---ACTCGT-TAGTGT--GATGTAAAC-CG----TTGCGAC----ATTG----CAGGTATAATTTTTATGAAAACGCGTTCGTCTTAAAATA----TCCGTTTaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcacatattcgttactacaatttttatacttctgcaatattttctttcgctttttttgtatgctcgtggccttttgggaatcagctaagaaatgaggtacccatctagcgcagatatgtttaccttttgatgataagtaagaattttgtaacaactgccgataagatgccaactatatgaggaagattttgatgcagtaacgaactgcagatatgtttgcagcaatagcagccaacgtggacctaccgctttcaggttcatcgtcgatgtcaaatttgccatctttaaataccttgtcccatctgtaaaccgttgctctggagacatttcatggcccatgtatatcacacaataacgaaaatataattttacaatgtacatgtatatttaaaacgctacacgttttgacattacctattaatttagacttcaaattctccttcacaatgataacaaaatacgatcagtgtacatgactggcctttttcaaatgcatgtaacttcggttttaaatacccaaattgcgataaaatttcgtgcattttgtagctattgaataactcgttagtgtgatgtaaaccgttgcgacattgcaggtataatttttatgaaaacgcgttcgtcttaaaatatccgttttg
gi|21 : gctgggcaatttggctcttggggacaactacattaccatgcaggaagcacatgctaacaagtcgttttctttttatatagattccaactgtttgatatttttgtaaatgttaccaataatatatcgagcattaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGGACAACTTCGCTCTTGTTGGCAG------C----TGCATT----AT-------------CGTTCAGGAAGCATATGT-------------ATCGCAAACCAGTTGCTGGTTTTCTT-TTTTCCATAT---ACCT--TTTAACCCTTTTCAAGACAGGTTCTTT--GTAAACGTTACCCGTAATGGATCGACtg
gi|22 : CAG---A-A---AAAGA--AT---T-T---TACAC-G-----GTATATTTTAAAAGCAACGCT------T-TTTTATATTATATAATT--C-CTA----ATTTCAAGCTT-C--AAA------TCTATCTTCATCTTCAG--------------AG-TAA----A--------A--------TA--------TG--GCCAGTGT-T--CT-TACTGACCATATTTGAAA-TGAAT
gi|23 : TATCTAGCAAATAATTTGATGTAATTGT----TCACAGC---TG-----A------AA---GGTT---TT-CAGGAAAGACAGATGAC---GTTG-------G-------------T----------C----------TCC----------TA----------G----AATGAT---GATCATCTTTGATG--TACAAT-TTTCCAa
gi|24 : cttattacttctttattTT--GTAAAACTTACCAGTAACAGATCGACCATT--T--GGAATA-AG-A-T--------CAGAACCACTCGAATTA--AAAA--AGCGTGTAAAG---AACTTTCTGG---TACTCctatcatttttat
gi|25 : CTGGACAACTTGGCTCATGTGG------GCAGC----TGCATT----ATCGTGCAGGAGGCAC-------------ATGC-------------TTGGCAAACAAGCTGCTGTTTTTTTTGTTTT-CACAT---AACT-GTTCGATTTTTT---AGACAgttgaaagcttagcaatacttggtatttcttgtcct
gi|26 : TCGTGCACTGTGTAGCTATTGAATA---GCTGTT-TATTGT--GCTATAAAT-CT----TTAC--A----AATTTA--CAGGTAAAGTTGCCATGTTAGCACTTTTGTC-TAAATGA--ATT-CGATTGCCCct
gi|27 : aGCATTGTGTAACTATTGGATA---ATTATT-TATTATTATATATAAAA-TG----TTACGAA----TCTG----CAGGTATAGTTTCCACGG------------C-TAAATAA--ATTCCGATTGCCGCTTGat
gi|28 : CGCAAAAT-GTTGCTAGTCTTCTT-TTTT-CATCT---ACCT-ATTTCATTTTTTTCAAGACAGAGTTTTT--GTGAAAGTTACCAGCGATTGATCGACCAT
gi|29 : GTTATTGATCTTTAT-ATTT-CATATTTCACTT-GTTTGATTATTTTCAAGACCGACTTTGT--GTAAACGTTACCAGTAATT
gi|3 : GCTAGACAACTTGGTTCTTACGGGCAGT----------TGCATT----AT-------------CTTGAGGCAA----ATTC-------------CTCGCAAACCAGTTGCTGGTTTTCTT-TTTT-CATTT---ACCT-GTTTGACATTTTTCAAGACAGAGTTTTT--GGAAAAGTTACCAGTAATTGACCGACC-----------------------GAATAACACGACCGCTTTATTTT--ATGAATATCAAGTAAAG--TACCTTTTTTG---TACTCCA--------CGA-GA---GTCTGGCAATATTTAATCT-TCGTT-GGCNNNNNNNNNN-NN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NNNNNTCCTCACATATTTGTTGTTTT-ATT-TAATTT-TTATAC---T---TTTGAAGC---A----G-TTTTTTCC-----CTTTGTACTCACGTGGCCTTTTGG--G-A-ATCAGTTAA-GT--TAAGGTACCCATCCATCACACATCTTTTTTTAA-CTTT-AGATGTTTAG---TCAGGAA-TTCT-TG--AACA---GC-----------TACCTATGAGATGTCAA-----------CAATAGAAGA----AAGATCGTGCAACGTATATATAGCATCTTTTTT-ATACAGTTAT----GTACTGT---AG-----A------TA---TGTT---TG-CAG------TAG-TAAT---A----------GCTGACCTTGA---C----------C----------TAC----------CA----------G----TGTGcaaacgacag
gi|3 : CTTG-ACCTACCAGTGTGTCAAATTTTGCTCCAGAGACACT--ACACGACCCTCG---AGCATCACACAATTCAG---A--------AATGATAGCT-T---TACAG-G-----TTATTTTTAAAAC------------------------------ACC--T-C------ACTTC----CT-C--AAA------TAT-TCT---CCTTCAA--------------AA-T------G--------A--------TAACAAACTTCG--CTCTGTGTGT--AT-GACTTACCTTTTGTCAAAATGAATGTAACTTCGGTATTGTGT----AC-C-A-AAATTCGATAAAAT-TTCATGAATTGTGTGGCTATTGAATA---ACCTTT-TATTGT--GAATTAAAT-CG----TTACGG--------GTTTGCAGATAGAGTTTCAATGAAAACGCGTTtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|30 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgacAGTTGTTGATCTTTTT-TCTT-CATAT---ATAC-ATTTGACTTTTTTCAAGATATAACTTTT--GT-AACGCTACCAGTAATTGATCGACCAt
gi|31 : ATGCGGTTTCCATCTAGCACAAATCTTTTTC-AT--------ATGTTTAT---TCAGGAT-TTTG-TG--AACA---GC-----------TGCT-----------G--------------ATAAGA
gi|32 : GCTGGACAAGTTGGCTGTAATTAGCAGTTGCAGTATCATGCATTCGGCGT---------------------------ACGC-------------CTCGCAAACGAGTTGCtgcctt
gi|33 : tGTATAGTTTCCATGGGAGCGTGTGTGTC-TAAAACC--TTTCCGATTGCCCCTCGCA
gi|4 : aAGCTTGACTCTTGTTGGCAGT----------TGTATT----AT-------------C-------------ATGCAGGAGAAACATGCCTCGTAAACCAGTTGATGGTCTTCTT-ATAC-CACAT---ACCTTGTTTGACCTTTAACAAGACATA-TTTTT--GTAAATGTTACCAGTAATTGATCGGCCATT--TTGGG--TA-AA-ATTTTGAATG--ACTACCGCGGGAACTGAAAAAAATATTGTGT--AGGTTACCTTTTTTG---CA----A--------TGATTA---GTCT------------TCTGT---T-GTCTTTTTCGTCTAAT-GTTTAATTATCATACCGACGTTGGGACTCGAAATAAAACACCAATGTATTc
gi|4 : actCAATGTATTAAAC---T---TCTGAAAC---A----C-TCGTT-GCG---TTTT-ATACTTTCGTGGCCTTTTGG--G-A-ATCATTTGA-GAGATGAAGTACCTATCAAGCACAAATCTTATTT-AC-CTTC-AGATGTTTAG---T-------------G--AAAA---GC-----------TGCC-----------GA-----------TAAGATAAAA----GAGATCTCTCAAGGTGAACCTAACATCTTCTTTGATGCAACCAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------TAG-TAAC---A----------G-------------C----------C----------TAC----------TA----------AGGCTTACCAGCGCGATAATCTTTAATG--TCAAAT-TTTCCATCTTTAA-CTTTCTTGTACC-ATC----TATAAATTGTTGCTCAAGAGACATT--AGACGGCCCATGT---TCATCACATAATGCAG-----T---AAG--T-ATAGTT-T---TAGAA-A-----GTATATTTATATTGCCACGCG------T-TTT---A--A-------------A----A---CAGACTT-C--AAA------T---TCT---ACTTCAT--------------AA-C------G--------A--------TA--------aaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|4 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacacAACTTCGATTTTGTAT----AT-TAT-GATTGCGATAAAGT-TTCGTGCAGCGTGTAGCCATTGAAAA---ACTCTT-TATTTT--GTTATAAAC-CG----TT---AA----ATTGTG--CAGGTATAGTTTTCATGGAAGCGCATTTGCC-TAAAATA--TTTCCGATTGCCTCTCGTAacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|5 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataaca-ACAACAATGT-TTATAT---G---TCTGTAGC---A----T-GTTTTGGCG---TTTTTA-GCTCTCGTGG--TTTTAGTGG-A-ATCAGTTAA-GAGATGAGGTACCAATCTAGCAT---------------CTGT-AGATGTCTAT---TCAGAAT-TTCG-TG--AATATCTGCCAATGAGA---TGCC-----------AA-----------CTAAATGAGA----AAGATCTTGCAAGGTTTATCTAGCATCTTCTTTGATGTAGTCAT----GTACTGC---AG-----T------TA---TGTT---TC-AAG------CAA-AAAC---A----------A-------------C----------CGACTTTAGCGTAC----------CA----------G----TGTGAG---GAATATCTTTGATG--TAAAAT-TGTCCATCTTTAA-ATTTCGTGTGTC-ATC----CGTAAATTGTTGCTCTATAGACATA--AGATA---CAT-TACATCAT-AC---ATT--G---A-A---GAAAAT-ATAGCT-T---TACAA-G-----ATATG-------------------------TT---A--ATATAACC--T-CTA----ATTTCAGACTT-A--ACG------T---TTT---CCTTCAT--------------GA-T------G--------ATAACAAAGTA--------CG--ACCAGTGTAT--AT-GACTAACCTAATTTCAAA-TGAATGTAACTTCGGTATTATAT----CC-C-C-AATTGCGATAAAAT----GT-CATTATGTAGCTATTAAAAA---ACTCTT-TACTGT--GAAATAAAT-CG----CTACAAATTTGAATG-----AAG---AGTTTCTATGGAATCGCGTTCGTC-cc
gi|6 : aTGCAGC---A----TATCTTTGGCG---TTTT-GTATTCTCGTGACCTTTAGG--T-A-ATCAGCTAA-GTGATGAGGTACCTATCTAGAACA----TTTTAA-AT-ATTT-AGATGTTAAG---TCAAAAT-TTCG-TG--AAAA---ACTGTCGATAAGATGCC-----------AA-----------CTATATGAGG----AAG---------------------ATCTTCCTTAATGTCGATAT----GTACTGC---AG-----AT-----TATTTTGTT---TG-CAG------CA
gi|6 : tAT-TTTTCATCTTTCA-ATT-CTTGTACC-ACC----TGTTAATCGTTGCT--AGAGACATT--AGACGAACTGTGT---TAATCACA------AG---A-------AAAT-GTA--T-TATATACAA-G-----GTCTATTTAAAACGCTACACG------T-TTA---G--ATATA-CTTTC-TTATTTCATTTCAGACTT-C--AAA------T---TCC---CCT-CATTAATAATAACAACCAA-T------A--------A--------CA--------AG--ACCAGTGTAT--AT-GACTGACAGTATATCAAA-TAAATGTAACTTCTGTTTTGTATGTATAT-C-A-CATGGCGATAAAAG-TTTGAATATCTTGTAGGTATTGAATA---ATTCTT-TATTAT--AATATAAAC-CG----TTACGAA----Atttttcatctttcaattcttgtaccacctgttaatcgttgctagagacattagacgaactgtgttaatcacaagaaaatgtattatatacaaggtctatttaaaacgctacacgtttagatatactttcttatttcatttcagacttcaaattcccctcattaataataacaaccaataacaagaccagtgtatatgactgacagtatatcaaataaatgtaacttctgttttgtatgtatatcacatggcgataaaagtttgaatatcttgtaggtattgaataattctttattataatataaaccgttacgaaattg
gi|7 : ttgcagcatatctttggcgttttgtattctcgtgacctttaggtaatcagctaagtgatgaggtacctatctagaacattttaaatatttagatgttaagtcaaaatttcgtgaaaaactgtcgataagatgccaactatatgaggaagatcttccttaatgtcgatatgtactgcagattattttgtttgcagcTGA--G-ATATCTGTTAA-AAAATGGGGTAGACGTCTTGCGCAAACTTAATTT-AC-GCCT-AAAT---TAGAGGTCAA-ATGTTCA-TG--AGCT---GC-----------TGAC-----------AATGGAA------CTATAAGAGCTTTTAAT-TCTTTAAATGTGAATCTTGCATCTTTTTTTAT------AT----GT-TTTC---AG-----A------CA---TG------A-CAG------C---TGACTTTG----------G-------------C----------T----------T------------C---------------------------TCAT-TATGACG--GCCAAT-TTTCCATTATTAACATAT-TTATGCC-ACC----CGTAAAATGTGACCTTAGAAATGTTTAAGA--ACCCATGCA---CATGACACAATT------A-C---AAAAAT-ATAGGTGT---TA-AA-A-----GTATATTTAAAATGCTACGCA--------TTT---A--ATATAACT--C-TTA----ATGTCGAGCTT-C--ttg
gi|7 : ATTTCAGTAAAAT-GACGTATATCCTGTAGAAACAAGACC---ACTCTT-TATTGA--CATGTAAAC-TGTATTTTA-AAA----AAAGT------ACATAGTTTCTATAGGAGTGCATATGTC-tgccttcatttccacagtaaaactatatttcagtaaaatgacgtatatcctgtagaaacaagaccactctttattgacatgtaaactgtattttaaaaaaagtacatagtttctataggagtgcatatgtc
gi|8 : tgagatatctgttaaaaaatggggtagacgtcttgcgcaaacttaatttacgcctaaattagaggtcaaatgttcatgagctgctgacaatggaactataagagcttttaattctttaaatgtgaatcttgcatctttttttatatgttttcagacatgacagctgactttggcttctcattatgacggccaattttccattattaacatatttatgccacccgtaaaatgtgaccttagaaatgtttaagaacccatgcacatgacacaattacaaaaatataggtgttaaaagtatatttaaaatgctacgcatttaatataactcttaatgtcgagcttctgccttcatttccacagtaaaactatATTTAGCATATGTTT--ACGCTGTTAT----GTACTTC---AG-----A------TA---CGTTATATGATAG------CAG-CAAC---ACCCGACTTGAG-------------C----------C----------TAC----------CA----------G----TGTAAG---GATCATTTTTTATG--TC-AATATTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTTTACCGTTGCTTTAGAGGCATT--AGACGATCAATGTGCAT-AGTACACAAT---------T---AAAAAT-ATGGCT-T---TAAAA-G-----GTCTATTACAAACGCCACGCC------T-TTT---C--ATAT-ACT--T-CGA----ATTTCA-ACTTGA--AAA------T---TCT----CTTCTT--------------AA-TTATATAGCAAC----A--------TA--------CA--ACCAGTGTTT--AT-AACTGA-CTTGTTTCAAA--GTATGTAGCTTCAGTATAGTAT----AT-C-C-AAGT---ATA---------TACACTGTGTAGCTATTGAATA---ACTGTT-TATTGT--GATATAAAT-C-------ATGGA----TATATTG-CTGGTATCGTTACCATGGAAACGCGATTGTC-
gi|9 : TTTTCATCT-ATTGTTTA-TTACCTACAAGAAATTGGAGTTCAATATAAAACACCCATGTCTTGCCACCACTATTAGT----------------TT--TTT-ACTATAACTT-TACTAC---T---TCTTAAGC---AGTTTT-TTCTTTGCA----TTTTGTACTCTTATGGCCTTTTGA--G-A-ATTAGTTAT-GCGATGCGGTACCCGTCTGGCACAAATCATTCTT-GC-CTTT-AAATGTTTAG---TCAGGAT-TTTG-TG--GACA---GCCTGTA------TGCC-----------AA-----------CTACATGAGA----AAGATCTTGCAATATGTTTCTAGCATCTTCTTTGATGCAG--------G----GC----------------------TGTT---TG-CAG------TAG-TTAC---A----------G-------------CCAACTTAGGTC----------TAC----------CA----------G----TGTGAG---GATCATCTCTGATG--TC----------------AA-AATTCTTGTACC-ATC----TGAAAACCTTTGCTCTCAACACATT--AGACGACCTATGT---TCATCACACAA
blockSeqs : TT GTTGCAGTATCA CGGC CGTTCAGGAAGCATATGT G C TTC TG T GAA . A TGTGGTAGGAATTT A GA TC AA G C A GGT CAT AAATGTTTGGCAATAATTTATCT TCGTT TCGTCTAATGTTTAA N G TT A CC C GTTTT A T AGTTTT T CTTT T TG . T C A T G . AGG C G T TC TCT TGCCGGTGAAATGCCAG C CTTTT T T T TTTA ATA ATACTAG TTT ATA A GAAAGA A CGACATGGTACTACTCCTACTAG CGC AC C G C C T AGTG CT A TAA G ACAGC TG TC ACGA G AGG G ATA A T TACAT T GGCATTATTGTA TTC T TTTC G . TCTGCCT TCA TAATAATAACAACCAATAACA GT A TC C G A A A GTAT A CAA A GTT G GCC G TA A CTACAAATTTGAATG G G T T A ATG
blockSeqs : TG GCAGC . CGTGCAGGAGGCACATGC . . . A T GGT . T TTGGGTAAAATTTT A CG TT . A C T G . CACGAGAGTCTGGCAATATTTAA GTT NNNNNNNNNNNNNN A N . N . T TTTT . T TGTAT G T T . . . . A . . . . G . . . . TGCCGATAAGATGCCAA A GCC T G G . . TGTTTA AG . . . . AGCTGACTTTGGCTTCCCAG . . C A C T . . CC C T A ACATC TC TC AAAA . AAC . . C . . C TTTTTTATATT TA G . . . TCTA G AATTATATAGCAACATA . A . . G A . A . . ATG T TA T C . . . TATTTTAAAAAAAGT A C C . T A
blockSeqs : CG CAAC . CATGCAGGAGAAACATGC . . . G T GAG . C TGGAATAAGAT . CT GG . G T A G . ATGATTAGTCT TT TCATCTATTGTTTA C C . . . T TTA . T ATA T T T . . . . A . . . . G . . . . TACCTATGAGATGTCAA A C G G G . . AT . . . . . TGCCGCCCAAGACATAACTG . . T . . C . . CC T T C ACAT TC TC AAGA . AAT . . C . . T ATCTTTT C T . . . TAT . AAGTGTAGCAAAATA . A . . G T . A . . TG T TG T . . . . CGTTTAAAAACA A A T . G A
blockSeqs : TT GC . CTTGAGGCAAATTC . . . A T GAC . A . . . . . A . T G . . T TTT . T AT T T T . . . . A . . . . A . . . . TGTCGATAAGATGCCAA T A A G C . . A . . . . . AATAGACTTAGGCGTTCCAA . . A . . C . . CC C A C GCAT TC TC ACAA . AGC . . A . . T ATTTTT C T . . . T . TTTCACAGTAAAATA . A . . T G . T . . GG G TT T . . . . ATGGATATATTG T G T . A T
blockSeqs : TT GT . CATGCAGGAAGCA . . . G T GAG . A . . . T AG G T T . . . . G . . . . G . . . . CAATGAGATGCCAA G G A T G . . T . . . . . AGCCGTACTGGACCTACCAG . . A . . C . . AT C T T ACC TC TC AGT . AGT . . C . . T ATTTTG C G . . . T . AATGATAACAAAATA . T . . G A . A . . AT T TT G . . . . TATCGAACTTG A A T . C T
blockSeqs : . GT . ACGC . . . G T TAA . C . T AC G T . . . . . C . . . . G . . . . TGACAATGGAA A A A G G . . A . . . . . AGCCAACGTGGACCTACCGC . . A . . C . . TT C A C AGC TC TC TAA . AGC . . C . . A GTTTTG T T . . . T . AATGATAACAAACTT . A . . T A . T . . AA G TT G . . . . TTGCGACATTG G G C . T .
blockSeqs : . . . A A TA . A . G AT T . . . . . . A . . . . A . . . . CTGTATGCCAA T A A T T . . A . . . . . AGCTGACCTTGACCTACCAG . . C . . C . . TT C A C AC TG GC TAA . AGG . . C . . C GTTTTA C T . . . T . GATGATAACAAAGTA . G . . A T . A . . CA G TT G . . . . TTACAAATTTA A G T .
blockSeqs : . . . . . . . C T A . . . . . . . A . . . . A . . . . TACTGA T A A G T . . A . . . . . AACCGACTTTAGCGTACCAG . . A . . C . . TC T A T AT GT T TAA . GGC . . G . . T GTTTAG C T . . . T . TATAGCAAAG . A . . T A . T . . AC G GA G . . . . TTACGAATCTG A T T .
blockSeqs : . . . . . . T . . . . . . . . A . . . . G . . . . TGCCGA T G . . . . . A . . . . . ACCCGACTTGAGCCTACCAG . . A . . C . . AT T A C TC TC T A . C . . C . . T CTTTTC T T . . . T . AGTAAAATA . A . . T A . A . . CA T . A . . . . TTACGGGTTTG G G . .
blockSeqs : . . . A . . . . . . . . . TGCCGA A A . . . . . A . . . . . AGCCAACTTAGGTCTACCAG . . C . . . . . CC C A C TA T . A . G . . C . . C ATTTA T T . . . T . AGTAAAATA . T . . G G . . . . T . . . . TTAAATTGTG A A
blockSeqs : . . . . . . . . . . TGCTG T . . T . . . . . AGCCTACTAAGGCT . . . . . . . CC . A C AC . . A . A . . A . . . TTA C G . . . T . AACGATA . . . . T . . C . . . . . .
blockSeqs : . . . . . . . . . . . . A . . . . . GTTGGTCTCCTAG . . . . . T . . . TC . . A . . . . . . . . . T . . . . . . TATAA G . . . .
blockSeqs : . . A . . . . . TTTGGCTTC . . . . . . . .
blockSeqs : . . . . . . .
blockSeqs : . . . . . . .
blockSeqCons : GC********** CGTGCAGGAGGCAATGC*************************** ** G** T****** TGCCGATGAATGCCAA*********************** AC*** AA********* ** TTACGAATTTG************
originalCons : GCTGGACAACTTGGCTCTTGTNGGCAGT-GCAGC----TGCATT----AT-------------C-------------ATGC-------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAAGG-TACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC---T---TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GC-----------TGCC-----------GA-----------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTACATCATCACACAATTCAG---A-T---AAAAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTAT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CG----TTACGAA----AACGT---CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
finalCons : GCTGGACAACTTGGCTCTTGTNGGCAGC----------TGCATT----ATCGTGCAGGAGGCAATGC---------------------------CTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAAG--TACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATACT------TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTTGG--G-A-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCG-TG--AACA---GCTGCCGATGAATGCCAA-----------------------CTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTAC---ATCACACAATTCAGAA---------AAAT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G--------A--------TA--------CG--ACCAGTGTAT--AT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-C-GATTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGT--GATATAAAC-CGTTACGAATTTG------------CAGGTATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): TCATTTTTATATAACTCTTAATTTCAAGATACACTTCTGCTTTCATTTTCACACTAAGTCCAGTAAAACGAATGTAGATCCAGTCCGAATTCATACACGAATTTTAATACAAATACGTGAATCTTGTAGATAAATTTCCATATATACCACTTTTAAAATAAATGT
Alignments
lowQualScore : 11111 3 44444444444444444444 11 11 111 55555555555555555555555555555555555 1111111 2222222222222222 11 11 111111 11111 1111111111 1 222 11111 111111111111 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1111111111 11 111111111111111111 1111111111 666666666666666666666666666666666666666666666666666 111 111
lowQualScore : 33333 5 8 1 0 5 0 4 4 777 88 4 999 55 1 77777777777777777777 5 11 44 11 1 0 3 1 8 3 444 88888888888888888888888888888888888 9999999 0 4444444444444444 1 1 33 5 11 1 000000 5 4 11111 7777777777 5 7777 0 4 55 3 3 1 0 3 3 3 0 555 4 3 0 00 000 3 2 44444 6 0 1 3 0 5555 444 444444444444 777 444 2 777777 2 99999999999999999999999999999999999999999999999999999999999999999999999999999999 555 44 7 5 0 7 1 3 6666 11 1 555 1 0 555 44 3333333333 0 11 3 55 3 555 1 3 77777 0 1 555555555555555555 5555 1 6666 2 33 3333333333 888 999999999999999999999999999999999999999999999999999 44 777 3 1 1 3 2 8888 4 000 3 4 444 4 0 888 3 44 3 555 44 7777 3 7777 3 44 0 1 1 2 4 1 444
lowQualScore : ..... . . . . . . . . ... .. . ... .. . .................... . .. .. .. . . . . . . ... ................................... ....... . ................ . . .. . .. . ...... . . ..... .......... . .... . . .. . . . . . . . . ... . . . .. ... . . ..... . . . . . .... ... ............ ... ... . ...... . ................................................................................ ... .. . . . . . . .... .. . ... . . ... .. .......... . .. . .. . ... . . ..... . . .................. .... . .... . .. .......... ... ................................................... .. ... . . . . . .... . ... . . ... . . ... . .. . ... .. .... . .... . .. . . . . . . ...
lowQualScore : 11111 7 5 4 0 0 1 0 0 000 88 9 000 55 0 77777777777777777777 6 44 44 00 4 8 2 4 0 8 000 00000000000000000000000000000000000 5555555 2 5555555555555555 0 0 88 8 00 5 999999 0 4 11111 6666666666 5 7777 6 0 55 6 6 5 2 1 1 1 2 444 5 1 2 66 777 3 3 99999 0 5 4 6 6 3333 444 888888888888 888 444 5 222222 9 33333333333333333333333333333333333333333333333333333333333333333333333333333333 444 22 0 7 3 3 0 3 5555 99 4 000 4 2 444 22 9999999999 4 00 1 99 1 444 5 1 77777 1 2 999999999999999999 4444 4 1111 9 99 3333333333 555 222222222222222222222222222222222222222222222222222 66 444 3 0 9 3 5 5555 0 222 6 5 888 7 2 555 1 22 1 444 22 8888 3 1111 3 66 8 0 6 1 0 0 444
consensus : GCTGGACAACTTGGCTCTTGTG----G-GCAGCTGCATTATCGTGCAGGAGGCACA-TGCCTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAA-GTACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC-T-----TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTT-GG--GA-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCGTGAACAGCTGCCGATAAGA-TGCCAACTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTA---CAT--CACACAAT--------TCAGAAAA-AT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G-------A--------TA--------CG--ACCAGTGTA--TAT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-CGA-TTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGTGATATA--AAC-CG---TTACG--AAT---T-T----GCAG-GT--ATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
Reference ( family-1287 ) : GCTGGACAACTTGGCTCTTGTN----G-GCAGCTGCATTATCGTGCAGGAGGCA-A-TGCCTCGCAAACCAGTTGCTGGTCTTCTT-TTTT-CATAT---ACCT-GTTTGACTTTTTTCAAGACAGANTTTTT--GTAAANGTTACCAGTAATTGATCGACCATT--T--GG--TA-AG-A-TTTGAATGACACGACCGCTNGAATTG--AAGAATATCGAGTAAA-GTACCTTTTTGG---TACTCCA--------CGATGA---GTCT------------TCT-T---T-GGCCTTTTCGTCT-AT-GTTTAATTATCAACCCGACGTTGGGGCTCGAAATAAAACACCAATGTNTTGTCACCANTA--AGTAAT--TCACATATTCGTT--TTT-ACTACAATTT-TTATAC-T-----TCTGAAGC---A----T-TTTTTTGCG---TTTTTGTACTCTCGTGGCCTTTT-GG--GA-ATCAGTTAA-GAGATGAGGTACCCATCTAGCACAAATCTTTTTT-AC-CTTT-AGATGTTTAG---TCAGGAT-TTCGTGAACAGCTGCCGATGA-A-TGCCAACTATANGAGG----AAGATCTTGCAAGGTGTATCTAGCATCTTCTTTGATGCAGTTAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TAC----------CA----------G----TGTGAG---GATCATCTTTGATG--TCNAAT-TTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTAAACCGTTGCTCTAGAGACATT--AGACGACCCATGTA---CAT--CACACAAT--------TCAGAAAA-AT-ATAGCT-T---TACAA-G-----GTATATTTAAAACGCTACGCG------T-TTT---A--ATATAACC--C-CTA----ATTTCAGACTT-C--AAA------T---TCT---CCTTCAT--------------AA-T------G-------A--------TA--------CG--ACCAGTGTA--TAT-GACTGACCNTATTTCAAA-TGAATGTAACTTCGGTATTGTAT----AC-C-CGA-TTNCGATAAAAT-TTCGTGCATTGTGTAGCTATTGAATA---ACTCTT-TATTGTGATATA--AAC-CG---TTACG--AAT---T-T----GCAG-GT--ATAGTTTCCATGGAAGCGCGTTCGTC-TAAAANA--NTTCCGATTGCCCCTCGTA
gi|1 : GCTGGACAACTTGACGCTTGTGTGCAGTGCAGCAGCGTTATC-------------A-TGCCTTGTAAACCAGTTGCTGGTCTTCTT-ATTT--ATAT---ACCT-GTTTGACCTTTTCCAAGACATTTTTTTTTTGTAAAAGTAACCAGTAACTGATTGACCATTATT--GA--TACAA-A-GTTGAATGACATGACCGGTGGAATTG--AATAATATCGAAAAAAAGCACCTGTTTGA---TACTCC---------TGATGG---GTCT------------TCT-T---TTGGCCTTT---------------ATTATCAACCCGACGTTTGGGCTTGAAGTAAGACAGGAATGCTTCGTCACCAATA--AGTAAT--TCACATATGCATT--TTC-ACTACAATTT-TTATACATGTACGTCTTAAGC---A----T-TTGTTTACG---TTTTTACATTCCCATAGTCTTTTGGG--GA-ATCCGCTAA-GGGATAAGGTACCCATCTAGCACACATTTGTTTT-AC-TTTTCAGATGTTTGG---TCAGAAT-TGCGTGAAC-------------A-TGCCAATTATAAAAGG----AAGATCTTGCAAGGTGTATATAGCATCTTA-TTGATGCAGTTAT----GTACAGT---AG-----A------TA---TGTT---TG-CAG------CAG-TAAC---A----------G-------------C----------C----------TGC----------CA----------G----TATACG---GATTATCTTTGATG--TCTAAT-TTTCCATCTTTAA-ATTTTTTGTATC-ACC----TGTAAAATGTTGCTCTAAAGACATT--AGATGACCAATGAACATCAT--CACACAATTGAGAAAATGAGAAAA-AT-ATAGTT-T---TACAA-G-----GTTTATGAAAAACGCTATGCA------T-TTT---A--ATTCAACC--T-CTA----ATTTCAGACTT-CAAAAA------A---TAT---CTTTCAT--------------AA-T------G-------A--------TA--------CG--ACCAGTGTT--TAT-GACTGACCTAATTTCAAA-TAGATGTAACTTCGGTATTGTAT----AC-C-CAT-TTTCGTTAAAAT-TTCGTGCATT-TGTAGCTATTGAATA---ACTCTT-CCGTGTGATATA--AAC-CG---TTCCGAAAAC---G-T----CCAG-GT--GTAGTTTCTATCGAAACGCGTTCATC--AAAATA--GTGCCGATTGCCCCTCGTA
gi|10 : GCGCCAACATTATTT-ACGCCTT-A-ATGAGTGA---TCACCAT-CTCATAAACTGCTGCCGGTGA-AATGCCAGCTATACGAGC----TAATTCATTCACTGTGTAGCTAGCATCTTCTTTGATGCAATTGT----GTGTAGA---TG-----A------TA---TGTT---TT-CAG------AAA-TGAA---A----------G-------------C----------T----------GACTTTGGCTTCCCA----------G----AATGAC---GGCCATCATTGAAG--TCCAAT-TTTCCACGATTAACATTT-TTATGCC-ACC----TGTAAAT-GT--------AAATGTT--TAAGGACCCATGTA---CCT--GACACAAT--------TCAGAAAA--T-ATAGGT-T---TGAAA-G-----GTATATTTAAAACGCTACGCA------T-TTT---T--ATATAACT--C-ATT----ATTTCAAGCTT-C--GAATCTGCCT---TCA---CTTTCAC--------------AG-TAA----A-------A--------TA--------TG--ACCAGTGTA--C-T-CACTGACCGCATTTCAAA-AGAATGTA
gi|11 : GCATCTTCCTTGATGCGGTGACTTTAATACTGC---AG-----T------AA---TAGA---TA-CAG------CCG-TGAT---T----------G-------------C----------C----------GCC----------CAAGACATAACTG----TACGAA---GCTCGTCTTTCGTG--TCCATT-TCTTTATCATTAA-ATTTCTCACATC-ACC----AATAAACTGTAGCCATAGGCGCGTC--TGAAGGCCCATAAA---CAG--CACAAAGT--------TCAGAAAA--C-AT--CT-T---AACAC-G-----GCATA---------------------------------ATATAAAC--C-CGA----ATTTCAGA-TT-C--AAA------T---CGT---CCCTCAT--------------AAGT------GTAGCAAAA--------TA--------TT--ACCAGTGTA--TAC-GACTGACCGTATTTC-AA-TGCATGCAATGTTGGTATTATGT----GA-C-TGA-ATACCACCAAATGTTCGTGCAATGT-TAGATAATCAATAC--AC-CTT-TACTGCAATATA--ACCACG---TTACG--
gi|12 : cATAC-T-----TCAGAAGC-----------TTTATGCG---TTTT-GTACTCCGGTGGCCTCTT-AA--GA-ATCA-TTACCGAGCTGAGGTACCCATCGAGCACAAACCTTTTAT-AC-CTTT-AGCGGTTTAG---TCAGGAT-TTCGT-------TGTCAATAG-A-TACTGACTAAAACAGA----AAGTTTTTGTAAGGTGTATCTAGCATAATCTTTGTTGATGTTAT----ATACTGTATAAGTGTTTA------TAAG-TGTT---TG-AAG------AAG-TAAC---AATAGACTTAGG-------------C----------G----------TTC----------CA----------A----TGAAAG---GACTATCTTTGATT--TATTTT-TTTCCGTCTTTAA-ATGTTTTTTACC-ATC----TGTAAACCGTTGCTCTAGCGAAATT---GACGACCGATGTA---CAT--CACACAAT--------TCAG-AGT-AT-ATAACT-T---TACAA-G-----GTATATCTAAAAtaa
gi|13 : aGTCACCAGTA--AGCAAT--TCAATTATCCGTT--TTA-ACTACAGTTT-TTATAC-T-----TTTAAAGC---A-------------------TTTTGTACTCTCGTG
gi|13 : ATCTAGCATCTTCTTTGATGCAGTT----------TGC---AA---------------------------CAG------TAA-TAAC---C----------GACATGGTACTACTC----------C----------TAC----------TA----------G----AGTGAG---GATCATGTTTGATG--TCAAAT-ATTCCATtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagatctagcatcttctttgatgcagtttgcaacagtaataaccgacatggtactactcctactagagtgaggatcatgtttgatgtcaaatattccat
gi|14 : gtcaccagtaagcaattcaattatccgttttaactacagtttttatacttttaaagcattttgtactctcgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaagagaagagaagaagCATGTTCGTT--TTTTATTACAATGT-TTATAC-T-----TCTAAAGCTGTA----T-TTTTAGGAG---TTTT-GTACTTACTAGGCCGTTT-GT--TA-ATCAATTAA-GAGATGAGGTAGACTTTTAGCAGAAATCATTTTT-AC-CTTT-ACATGTTTAG---TCAAGAT-TTCGTGAACAGCTGC
gi|14 : TCTTTGATGCAGTAAT----GTTCTGC---AA-----A------TA---TGTT---GA-CAT------CAA-TAAC---A----------GCCGTACTGGA---C----------C----------TAC----------CA----------G----TGTGAT---GATCATCTTTGATGACTCAAATGTTTCCatctttgatgcagtaatgttctgcaaatatgttgacatcaataacagccgtactggacctaccagtgtgatgatcatctttgatgactcaaatgtttccgatttgtttccccccttatattatttattgtttttttaaacg
gi|15 : catgttcgttttttattacaatgtttatacttctaaagctgtatttttaggagttttgtacttactaggccgtttgttaatcaattaagagatgaggtagacttttagcagaaatcatttttacctttacatgtttagtcaagatttcgtgaacagctgcaAACACCACGTGGCATTAT-TGT---A--ATATAAAT--C-CTA----ATTTTTAGCTT-G--AA-----------TCTG--CCTTCATTTTCAC--------AG-T------A-------AAA------TA--------TG--GCCAGTGTACTCAT-AA---ATCGCTTTTCAAA-TAAATGTAAATGTGGT-CCGAAT----GCAC-GGA-TTTCAAAAAAGT-TACGTTCATCTCGTA--TATC-AACAGCCACTCTTGTTTTGGCATGTA--GAT-CGCGTTTAAA--AA------------CAATGT--AAAGTATCGATAGGAGCGCATTTATC-TAAAAAAATGTTCCGTTTGCCTCTTGTAgatttgtttccccccttatattatttattgtttttttaaacg
gi|16 : A-ATCAGTTAA-GAACTTAGGTGCCAATCTAGCACAAATCATTTGT-AC-CTTT-AGATGTTTAG---TC---------GCAAATAGCTGCCGATAAGA-TGCCAA----------------GGTATTGCAAGGTGTATCTAGCACCTTATTTGATGCAGTTAT----GTACTGC---AG-----ATACTAGTA---TGTT---TG-CAG------t
gi|16 : tctttggccttgtgttgtcccattgttatcagtt----TGTAAACCGTTTCTTTATAGACATT--AGACGTCCCATGTA---CAT--AACATATT--------TCAGAAaattatttgcatgtaaaccgtttctttatagacattagacgtcccatgtacataacatatttcagaa
gi|17 : tctttggccttgtgttgtcccattgttatcagttaatcagttaagaacttaggtgccaatctagcacaaatcatttgtacctttagatgtttagtcgcaaatagctgccgataagatgccaaggtattgcaaggtgtatctagcaccttatttgatgcagttatgtactgcagatactagtatgtttgcagaattatttgcaATTATCTTGCAGAAGGCATA-TACCTCGCAATTCAGTTGCTGGTCATCTT-TATG-CATTT---ACCT-ATTTGACTGGTATTAACACAGAAATTTT--GTACAAGTTACCAGTAATTGATCGAGCATTTGT--GG--TA-GGAA-TTTGAATGACA---------GAACTG--AAGAATAT-GAGTAGA-GTATGTTTTTGGCATTACTCAAATGTTTGGCAATAATTTATCT------------TCT-T---T-GACCTTTT
gi|18 : attcagaaattatttTTACAACGCTATGCA------T-TTT---G--GTATAATC--T-CTA----ATTTCCGATTT-T--AAA------T---TCT---CCTTTAT--------------TA-T------A-------A------------------CA--AC------A--TATCGAC-GACCTTGTTCCAAA-TGAATGCAGCATCGGTATTGTTT----AC-T-ATA-TTTCGGTAGAAG-TGCGTGCATTTTGTAGCTGTTCAATA---GCTCTT-TTTTATGATTTA--AAC-AG---TATCG--AAC---T-T----GCAG-GT--ATAGTTTCTATGGAACCGCtt
gi|19 : ACAGT--------TCAGTAAATAT-ATG----T---TAAAG-G-----ACATGTCTGAAACCCTGAGCA------TCTTT---T--ATATAAAC--C-CGA----ATTTCAGATTG-C--AAG------T---TTC---TCATCAT--------------TA-T------A-------G--------CAAAG-----TGGTATCAGTGTT--TTT-TACTGATTGTATTCCAAA-TGAA--CAACTCTAGTATTaat
gi|2 : ttaataaaccgtgtcccaaaGCTGGGCAATTTGGCTCTTGGG----G-ACAACTACATTACCATGCAGGAAGCACA-TGCT-----AACAAGTCGTT----TTCTT-TTT---ATAT---AGAT--TCCAACTGTTT----GATA---TTTTT--GTAAATGTTACCAATAATATATCGAGCATT--ttctgaacaattcccac
gi|2 : AT--TCACATATTCGTT------ACTACAATTT-TTATAC-T-----TCTGCAAT---A----T-TTTCTTTCGCTTTTTTTGTATGCTCGTGGCCTTTT-GG--GA-ATCAGCTAA-GAAATGAGGTACCCATCTAGCGCAGATATGTTT--AC-CTTT-TGATGATAAG---TAAGAAT-TTTGT-AACAACTGCCGATAAGA-TGCCAACTATATGAGG----AAGAT-------------------------TTTGATGCAGTAAC----GAACTGC---AG-----A------TA---TGTT---TG-CAG------CAA-TAGC---A----------G-------------C----------CAACGTGGACCTAC----------CG----------C----TTTCAG---GTTCATCGTCGATG--TCAAAT-TTGCCATCTTTAA-ATACCTTGTCCC-ATC----TGTAAACCGTTGCTCTGGAGACATT--TCATGGCCCATGTA---TAT--CACACAAT---------AACGAAA-AT-ATAATT-T---TACAATGTACATGTATATTTAAAACGCTACACG------T-TTT---G--ACATTACC--TATTA----ATTT-AGACTT-C--AAA------T---TCT---CCTTCAC--------------AA-T------G-------A--------TAACAAAATACG--ATCAGTGTA--CAT-GACTGGCCTT-TTTCAAA-TGCATGTAACTTCGGTTTTAAAT----AC-C-CAAATTGCGATAAAAT-TTCGTGCATTTTGTAGCTATTGAATA---ACTCGT-TAGTGTGATGTA--AAC-CG---TTGCG--ACA---T-T----GCAG-GT--ATAATTTTTATGAAAACGCGTTCGTCTTAAAATA----TCCGTTTaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcacatattcgttactacaatttttatacttctgcaatattttctttcgctttttttgtatgctcgtggccttttgggaatcagctaagaaatgaggtacccatctagcgcagatatgtttaccttttgatgataagtaagaattttgtaacaactgccgataagatgccaactatatgaggaagattttgatgcagtaacgaactgcagatatgtttgcagcaatagcagccaacgtggacctaccgctttcaggttcatcgtcgatgtcaaatttgccatctttaaataccttgtcccatctgtaaaccgttgctctggagacatttcatggcccatgtatatcacacaataacgaaaatataattttacaatgtacatgtatatttaaaacgctacacgttttgacattacctattaatttagacttcaaattctccttcacaatgataacaaaatacgatcagtgtacatgactggcctttttcaaatgcatgtaacttcggttttaaatacccaaattgcgataaaatttcgtgcattttgtagctattgaataactcgttagtgtgatgtaaaccgttgcgacattgcaggtataatttttatgaaaacgcgttcgtcttaaaatatccgttttg
gi|21 : gctgggcaatttggctcttggggacaactacattaccatgcaggaagcacatgctaacaagtcgttttctttttatatagattccaactgtttgatatttttgtaaatgttaccaataatatatcgagcattaaggattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGGACAACTTCGCTCTTGTT----G-GCAGCTGCATTATCGTTCAGGAAGCATA-TGTATCGCAAACCAGTTGCTGGTTTTCTT-TTTTCCATAT---ACCT--TTTAACCCTTTTCAAGACAGGTTCTTT--GTAAACGTTACCCGTAATGGATCGACtg
gi|22 : CAGAAAA-AG-A--ATT-T---TACAC-G-----GTATATTTTAAAAGCAACGCT------T-TTTTATATTATATAATT--C-CTA----ATTTCAAGCTT-C--AAA------TCTATCTTCATCTTCAG--------------AG-TAA----A-------A--------TA--------TG--GCCAGTGT---TCT-TACTGACCATATTTGAAA-TGAAT
gi|23 : TATCTAGCAAATAATTTGATGTAATTGT----TCACAGC---TG-----A------AA---GGTT---TT-CAGGAAAGACAGATGAC---GTTG-------G-------------T----------C----------TCC----------TA----------G----AATGAT---GATCATCTTTGATG--TACAAT-TTTCCAa
gi|24 : cttattacttctttattTT--GTAAAACTTACCAGTAACAGATCGACCATT--T--GGAATA-AG-A-T--------CAGAACCACTCGAATTA--AAAA--AGCGTGTAAA-G-AACTTTCTGG---TACTCctatcatttttat
gi|25 : CTGGACAACTTGGCTCATGTG----G-GCAGCTGCATTATCGTGCAGGAGGCACA-TGCTTGGCAAACAAGCTGCTGTTTTTTTTGTTTT-CACAT---AACT-GTTCGATTTTTT---AGACAgttgaaagcttagcaatacttggtatttcttgtcct
gi|26 : TCGTGCACTGTGTAGCTATTGAATA---GCTGTT-TATTGTGCTATA--AAT-CT---TTACA--AAT---T-T----ACAG-GT--AAAGTTGCCATGTTAGCACTTTTGTC-TAAATGA--ATT-CGATTGCCCct
gi|27 : aGCATTGTGTAACTATTGGATA---ATTATT-TATTATTATATATAAAA-TG---TTACG--AAT---C-T----GCAG-GT--ATAGTTTCCACGG------------C-TAAATAA--ATTCCGATTGCCGCTTGat
gi|28 : CGCAAAAT-GTTGCTAGTCTTCTT-TTTT-CATCT---ACCT-ATTTCATTTTTTTCAAGACAGAGTTTTT--GTGAAAGTTACCAGCGATTGATCGACCAT
gi|29 : GTTATTGATCTTTAT-ATTT-CATATTTCACTT-GTTTGATTATTTTCAAGACCGACTTTGT--GTAAACGTTACCAGTAATT
gi|3 : GCTAGACAACTTGGTTCTTACG----G-GCAGTTGCATTATCTTG----AGGCA-AATTCCTCGCAAACCAGTTGCTGGTTTTCTT-TTTT-CATTT---ACCT-GTTTGACATTTTTCAAGACAGAGTTTTT--GGAAAAGTTACCAGTAATTGACCGACC-----------------------GAATAACACGACCGCTTTATTTT--ATGAATATCAAGTAAA-GTACCTTTTTTG---TACTCCA--------CGA-GA---GTCTGGCAATATTTAATCT-TCGTT-GGCNNNNNNNNNN-NN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--NNNNNTCCTCACATATTTGTTGTTTT-ATT-TAATTT-TTATAC-T-----TTTGAAGC---A----G-TTTTTTCC-----CTTTGTACTCACGTGGCCTTTT-GG--GA-ATCAGTTAA-GT--TAAGGTACCCATCCATCACACATCTTTTTTTAA-CTTT-AGATGTTTAG---TCAGGAA-TTCTTGAACAGCTACCTATGAGA-TGTCAACAATAGAAGA----AAGATCGTGCAACGTATATATAGCATCTTTTTT-ATACAGTTAT----GTACTGT---AG-----A------TA---TGTT---TG-CAG------TAG-TAAT---A----------GCTGACCTTGA---C----------C----------TAC----------CA----------G----TGTGcaaacgacag
gi|3 : CTTG-ACCTACCAGTGTGTCAAATTTTGCTCCAGAGACACT--ACACGACCCTCGAG---CAT--CACACAAT--------TCAGAAA---TGATAGCT-T---TACAG-G-----TTATTTTTAAAAC------------------------------ACC--T-C------ACTTC----CT-C--AAA------TAT-TCT---CCTTCAA--------------AA-T------G-------A--------TAACAAACTTCG--CTCTGTGTG--TAT-GACTTACCTTTTGTCAAAATGAATGTAACTTCGGTATTGTGT----AC-C-AAA-ATTCGATAAAAT-TTCATGAATTGTGTGGCTATTGAATA---ACCTTT-TATTGTGAATTA--AAT-CG---TTACG--GGT---T-T----GCAG-AT--AGAGTTTCAATGAAAACGCGTTtcaaattttgctccagagacactacacgaccctcgagcatcacacaattcagaaatgatagctttacaggttatttttaaaacacctcacttcctcaaatattctccttcaaaatgataacaaacttcgctctgtgtgtatgacttaccttttgtcaaaatgaatgtaacttcggtattgtgtaccaaaattcgataaaatttcatgaattgtgtggctattgaataaccttttattgtgaattaaatcgttacgggtttgcagatagagtttcaatgaaaacgcgttt
gi|30 : gctagacaacttggttcttacgggcagttgcattatcttgaggcaaattcctcgcaaaccagttgctggttttcttttttcatttacctgtttgacatttttcaagacagagtttttggaaaagttaccagtaattgaccgaccgaataacacgaccgctttattttatgaatatcaagtaaagtaccttttttgtactccacgagagtctggcaatatttaatcttcgttggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctcacatatttgttgttttatttaatttttatacttttgaagcagttttttccctttgtactcacgtggccttttgggaatcagttaagttaaggtacccatccatcacacatctttttttaactttagatgtttagtcaggaattcttgaacagctacctatgagatgtcaacaatagaagaaagatcgtgcaacgtatatatagcatcttttttatacagttatgtactgtagatatgtttgcagtagtaatagctgacAGTTGTTGATCTTTTT-TCTT-CATAT---ATAC-ATTTGACTTTTTTCAAGATATAACTTTT--GT-AACGCTACCAGTAATTGATCGACCAt
gi|31 : ATGCGGTTTCCATCTAGCACAAATCTTTTTC-AT--------ATGTTTAT---TCAGGAT-TTTGTGAACAGCTGCTGATAAGA-TGCC
gi|32 : GCTGGACAAGTTGGCTGTAATT----A-GCAGTTGCAGTATCATGCATTCGGCGTA-CGCCTCGCAAACGAGTTGCtt
gi|33 : t-GT--ATAGTTTCCATGGGAGCGTGTGTGTC-TAAAACC--TTTCCGATTGCCCCTCGCA
gi|4 : aAGCTTGACTCTTGTT----G-GCAGTTGTATTATCATGCAGGAGAAACA-TGCCTCGTAAACCAGTTGATGGTCTTCTT-ATAC-CACAT---ACCTTGTTTGACCTTTAACAAGACATA-TTTTT--GTAAATGTTACCAGTAATTGATCGGCCATT--TTGGG--TA-AA-ATTTTGAATG--ACTACCGCGGGAACTGAAAAAAATATTGTGTAGG-TTACCTTTTTTG---CA----A--------TGATTA---GTCT------------TCTGT---T-GTCTTTTTCGTCTAAT-GTTTAATTATCATACCGACGTTGGGACTCGAAATAAAACACCAATGTATTc
gi|4 : actCAATGTATTAAAC-T-----TCTGAAAC---A----C-TCGTT-GCG---TTTT-ATACTTTCGTGGCCTTTT-GG--GA-ATCATTTGA-GAGATGAAGTACCTATCAAGCACAAATCTTATTT-AC-CTTC-AGATGTTTAG---T------------GAAAAGCTGCCGATAA-G---------ATAAAAG------AGATCTCTCAAGGTGAACCTAACATCTTCTTTGATGCAACCAT----GTACTGC---AG-----A------TA---TGTT---TG-CAG------TAG-TAAC---A----------G-------------C----------C----------TAC----------TA----------AGGCTTACCAGCGCGATAATCTTTAATG--TCAAAT-TTTCCATCTTTAA-CTTTCTTGTACC-ATC----TATAAATTGTTGCTCAAGAGACATT--AGACGGCCCATGTT---CAT--CACATAAT--------GCAGTAAG--T-ATAGTT-T---TAGAA-A-----GTATATTTATATTGCCACGCG------T-TTT---A--A-------------A----A---CAGACTT-C--AAA------T---TCT---ACTTCAT--------------AA-C------G-------A--------TA--------aaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|4 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacacAACTTCGATTTTGTAT----AT-TATGA-TTGCGATAAAGT-TTCGTGCAGCGTGTAGCCATTGAAAA---ACTCTT-TATTTTGTTATA--AAC-CG---TTA----AAT---TGT----GCAG-GT--ATAGTTTTCATGGAAGCGCATTTGCC-TAAAATA--TTTCCGATTGCCTCTCGTAacaaacttcgattttgtatattatgattgcgataaagtttcgtgcagcgtgtagccattgaaaaactctttattttgttataaaccgttaaattgtgcaggtatagttttcatggaagcgcatttgcctaaaatatttccgattgcctctcgtacc
gi|5 : actagcttgactcttgttggcagttgtattatcatgcaggagaaacatgcctcgtaaaccagttgatggtcttcttataccacataccttgtttgacctttaacaagacatatttttgtaaatgttaccagtaattgatcggccattttgggtaaaattttgaatgactaccgcgggaactgaaaaaaatattgtgtaggttaccttttttgcaatgattagtcttctgttgtctttttcgtctaatgtttaattatcataccgacgttgggactcgaaataaaacaccaatgtattaaacttctgaaacactcgttgcgttttatactttcgtggccttttgggaatcatttgagagatgaagtacctatcaagcacaaatcttatttaccttcagatgtttagtgaaaagctgccgataagataaaagagatctctcaaggtgaacctaacatcttctttgatgcaaccatgtactgcagatatgtttgcagtagtaacagcctactaaggcttaccagcgcgataatctttaatgtcaaattttccatctttaactttcttgtaccatctataaattgttgctcaagagacattagacggcccatgttcatcacataatgcagtaagtatagttttagaaagtatatttatattgccacgcgttttaaaacagacttcaaattctacttcataacgataaca-ACAACAATGT-TTATAT-G-----TCTGTAGC---A----T-GTTTTGGCG---TTTTTA-GCTCTCGTGG--TTTT-AGTGGA-ATCAGTTAA-GAGATGAGGTACCAATCTAGCAT---------------CTGT-AGATGTCTAT---TCAGAAT-TTCGTGAATATCTGCCAATGAGA-TGCCAACTAAATGAGA----AAGATCTTGCAAGGTTTATCTAGCATCTTCTTTGATGTAGTCAT----GTACTGC---AG-----T------TA---TGTT---TC-AAG------CAA-AAAC---A----------A-------------C----------CGACTTTAGCGTAC----------CA----------G----TGTGAG---GAATATCTTTGATG--TAAAAT-TGTCCATCTTTAA-ATTTCGTGTGTC-ATC----CGTAAATTGTTGCTCTATAGACATA--AGATA---CAT-TA---CAT--CATAC-AT--------TGAAGAAA-AT-ATAGCT-T---TACAA-G-----ATATG-------------------------TT---A--ATATAACC--T-CTA----ATTTCAGACTT-A--ACG------T---TTT---CCTTCAT--------------GA-T------G-------ATAACAAAGTA--------CG--ACCAGTGTA--TAT-GACTAACCTAATTTCAAA-TGAATGTAACTTCGGTATTATAT----CC-C-CAA-TTGCGATAAAAT----GT-CATTATGTAGCTATTAAAAA---ACTCTT-TACTGTGAAATA--AAT-CG---CTACA--AAT---T-T----GAAT-GA--AGAGTTTCTATGGAATCGCGTTCGTC-cc
gi|6 : aTGCAGC---A----TATCTTTGGCG---TTTT-GTATTCTCGTGACCTTTA-GG--TA-ATCAGCTAA-GTGATGAGGTACCTATCTAGAACA----TTTTAA-AT-ATTT-AGATGTTAAG---TCAAAAT-TTCGTGAAAAACTGTCGATAAGA-TGCCAACTATATGAGG----AAG---------------------ATCTTCCTTAATGTCGATAT----GTACTGC---AG-----AT-----TATTTTGTT---TG-CAG------CA
gi|6 : tAT-TTTTCATCTTTCA-ATT-CTTGTACC-ACC----TGTTAATCGTTGCT--AGAGACATT--AGACGAACTGTGTT---AAT--CACA--------------AGAAAA--T-GTA--T-TATATACAA-G-----GTCTATTTAAAACGCTACACG------T-TTA---G--ATATA-CTTTC-TTATTTCATTTCAGACTT-C--AAA------T---TCC---CCT-CATTAATAATAACAACCAA-T------A-------A--------CA--------AG--ACCAGTGTA--TAT-GACTGACAGTATATCAAA-TAAATGTAACTTCTGTTTTGTATGTATAT-C-ACA-TGGCGATAAAAG-TTTGAATATCTTGTAGGTATTGAATA---ATTCTT-TATTATAATATA--AAC-CG---TTACG--AAA---T-T----Gtttttcatctttcaattcttgtaccacctgttaatcgttgctagagacattagacgaactgtgttaatcacaagaaaatgtattatatacaaggtctatttaaaacgctacacgtttagatatactttcttatttcatttcagacttcaaattcccctcattaataataacaaccaataacaagaccagtgtatatgactgacagtatatcaaataaatgtaacttctgttttgtatgtatatcacatggcgataaaagtttgaatatcttgtaggtattgaataattctttattataatataaaccgttacgaaattg
gi|7 : ttgcagcatatctttggcgttttgtattctcgtgacctttaggtaatcagctaagtgatgaggtacctatctagaacattttaaatatttagatgttaagtcaaaatttcgtgaaaaactgtcgataagatgccaactatatgaggaagatcttccttaatgtcgatatgtactgcagattattttgtttgcagcT-GA--GATATCTGTTAA-AAAATGGGGTAGACGTCTTGCGCAAACTTAATTT-AC-GCCT-AAAT---TAGAGGTCAA-ATGTTCATGA---GCTGCTGAC-A-A-TGG-AACTATAAGAGCTTTTAAT-TCTTTAAATGTGAATCTTGCATCTTTTTTTAT------AT----GT-TTTC---AG-----A------CA---TG------A-CAG------C---TGACTTTG----------G-------------C----------T----------T------------C---------------------------TCAT-TATGACG--GCCAAT-TTTCCATTATTAACATAT-TTATGCC-ACC----CGTAAAATGTGACCTTAGAAATGTTTAAGA--ACCCATGCA---CAT--GACACAAT--------T-ACAAAA-AT-ATAGGTGT---TA-AA-A-----GTATATTTAAAATGCTACGCA--------TTT---A--ATATAACT--C-TTA----ATGTCGAGCTT-C--
gi|7 : A-TTTCAGTAAAAT-GACGTATATCCTGTAGAAACAAGACC---ACTCTT-TATTGACATGTA--AAC-TG---T-------AT---T-TTAAAAAAA-GTACATAGTTTCTATAGGAGTGCATATGTC-tgccttcatttccacagtaaaactatatttcagtaaaatgacgtatatcctgtagaaacaagaccactctttattgacatgtaaactgtattttaaaaaaagtacatagtttctataggagtgcatatgtc
gi|8 : tgagatatctgttaaaaaatggggtagacgtcttgcgcaaacttaatttacgcctaaattagaggtcaaatgttcatgagctgctgacaatggaactataagagcttttaattctttaaatgtgaatcttgcatctttttttatatgttttcagacatgacagctgactttggcttctcattatgacggccaattttccattattaacatatttatgccacccgtaaaatgtgaccttagaaatgtttaagaacccatgcacatgacacaattacaaaaatataggtgttaaaagtatatttaaaatgctacgcatttaatataactcttaatgtcgagcttctgccttcatttccacagtaaaactatATTTAGCATATGTTT--ACGCTGTTAT----GTACTTC---AG-----A------TA---CGTTATATGATAG------CAG-CAAC---ACCCGACTTGAG-------------C----------C----------TAC----------CA----------G----TGTAAG---GATCATTTTTTATG--TC-AATATTTCCATCTTTAA-ATTTCTTGTACC-ACC----TGTTTACCGTTGCTTTAGAGGCATT--AGACGATCAATGTG---CATAGTACACAAT--------T---AAAA-AT-ATGGCT-T---TAAAA-G-----GTCTATTACAAACGCCACGCC------T-TTT---C--ATAT-ACT--T-CGA----ATTTCA-ACTTGA--AAA------T---TCT----CTTCTT--------------AA-TTATATAGCAAC---A--------TA--------CA--ACCAGTGTT--TAT-AACTGA-CTTGTTTCAAA--GTATGTAGCTTCAGTATAGTAT----AT-C-CAA-GT---ATA---------TACACTGTGTAGCTATTGAATA---ACTGTT-TATTGTGATATA--AAT-C------ATG--GATATAT-T----GCTG-GT--ATCGTTACCATGGAAACGCGATTGTC-
gi|9 : TTTTCATCT-ATTGTTTA-TTACCTACAAGAAATTGGAGTTCAATATAAAACACCCATGTCTTGCCACCACTATTAGT----------------TT--TTT-ACTATAACTT-TACTAC-T-----TCTTAAGC---AGTTTT-TTCTTTGCA----TTTTGTACTCTTATGGCCTTTT-GA--GA-ATTAGTTAT-GCGATGCGGTACCCGTCTGGCACAAATCATTCTT-GC-CTTT-AAATGTTTAG---TCAGGAT-TTTGTGGACAGCC-----TGT-A-TGCCAACTACATGAGA----AAGATCTTGCAATATGTTTCTAGCATCTTCTTTGATGCAG--------G----GC----------------------TGTT---TG-CAG------TAG-TTAC---A----------G-------------CCAACTTAGGTC----------TAC----------CA----------G----TGTGAG---GATCATCTCTGATG--TC----------------AA-AATTCTTGTACC-ATC----TGAAAACCTTTGCTCTCAACACATT--AGACGACCTATGTT---CAT--CACACAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): TCATTTTTATATAACTCTTAATTTCAAGATACACTTCTGCTTTCATTTTCACACTAAGTCCAGTAAAACGAATGTAGATCCAGTCCGAATTCATACACGAATTTTAATACAAATACGTGAATCTTGTAGATAAATTTCCATATATACCACTTTTAAAATAAATGT