lowQualScore : 111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111 222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 666666666666666666666666666666666666666666666666666666666 1111111 33333333333 1111111 1 1 22222 1111 22 111 333333333333333 1111 99999999999999999999999999999 1 1111 1111111 111111111111111111111111111111111 33333333 1 1 1 1111111 2222222 1 1 8888888888888888888888 1 1 1 2222222 4444 11 111111111 11111 11 1 1 1 111111 11 1 55555555 4444444444444444444444 666 444444444444444 111 111 999999999999999999999999999999999999999999999999999999999999999999999 66666
lowQualScore : 666666666666666666666666666666666666666666666666666666666 0 888 6 6666666 5 99999999999 55 66 6666666 6 4 77 5 55 55555 7 88 7777 4 1 4 5 11 0 3 7 1 111 888888888888888 0000 0 5 5 3 22222222222222222222222222222 0 0 77 2 1 0 2222 5 2222222 3 888888888888888888888888888888888 3 77 1 22222222 1 1 1 5 8 88 1 6 8 2 0000000 4444444 3 5 1 5 1 6 2222222222222222222222 5 7 5 8 7 5 888 5 888 3 1 0 5 77 1111111 7 5 5555 5 5 7 0 5 77 777777777 1 3 9 77 1 1 44444 3 99 5 0 99 1 2 9 99 0 7 6 3 6 6 5 5 777777 99 6 6 6 99999999 8 0 7 5 7777777777777777777777 3 8 5 7 333 888888888888888 555 000 5 77 777777777777777777777777777777777777777777777777777777777777777777777 88 2 6 3 6 44444 2 2 99 0 3 1
lowQualScore : ......................................................... . ... . ....... . ........... .. .. ....... . . .. . .. ..... . .. .... . . . . .. . . . . ... ............... .... . . . . ............................. . . .. . . . .... . ....... . ................................. . .. . ........ . . . . . .. . . . . ....... ....... . . . . . . ...................... . . . . . . ... . ... . . . . .. ....... . . .... . . . . . .. ......... . . . .. . . ..... . .. . . .. . . . .. . . . . . . . . ...... .. . . . ........ . . . . ...................... . . . . ... ............... ... ... . .. ..................................................................... .. . . . . ..... . . .. . . .
lowQualScore : 999999999999999999999999999999999999999999999999999999999 4 888 0 2222222 4 55555555555 11 55 2222222 5 4 22 2 33 66666 0 22 2222 4 8 4 4 88 1 0 9 4 111 888888888888888 6666 1 7 7 9 99999999999999999999999999999 1 7 99 1 4 3 1111 7 3333333 7 888888888888888888888888888888888 9 77 7 44444444 3 0 9 4 0 99 6 4 1 5 4444444 2222222 0 0 0 3 0 7 2222222222222222222222 2 2 4 6 6 0 999 0 666 4 7 7 7 99 3333333 3 7 7777 7 7 3 6 0 11 888888888 4 3 6 99 9 7 33333 0 33 7 1 22 0 7 3 22 8 8 6 2 0 0 2 0 888888 00 7 7 7 55555555 7 9 3 7 0000000000000000000000 0 1 7 6 111 666666666666666 111 000 7 99 222222222222222222222222222222222222222222222222222222222222222222222 55 5 0 2 0 00000 5 0 22 2 2 2
consensus : ATGAAAACTTTACATCGA------------C--------------TTCAAAAG--TCTCT---T-----------TGCT---GATAAATGTATATTCA-------GGGCT-NAAAAAA--TT-TTCAT-CGAAGCTTTAT-------GGCTATATTAATGTTTC-TGTGTAATTTACTGGG-AA-AAA-TCAGACATCGCATG----TTT-TTTT-CTAAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAG--GCATAAAGT----G----C----TGA----GTGCAATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGG-----NC----TCC-------TA------GAATGCATTCCTGAATACGTCA--TCTCTATGAGC----TT-ACGTA---ACGCTA----AATGAGCGTGTTTGGAA-T----------ACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTC-----GTTTATGGTATCAATTTGATGNTTGGACCTGACCCTCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCACT-GTTTCGCGTGTATTGCAAATGACGTCGTGCCCATAAC--------AGTCC-GAAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATNNGAACACGNTTTTGTCTCAAACGGTTTATGATCGTCTGTGC-ATGAACAC--CGNNACGCCGAGGAGT-ACCG-G-TTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAAT-AGCGCGAT---------GAGTACGTAA--CGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAANAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAGT-TG-TTTTTTAAAACAAA-T-AA--TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GT--------AA-----GTGAAAAACC-GGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACT----TCNTAA--------AT---NTTGGAGAA-GAAATG-A-AAT-----GAT--------------TATCCGCAATTAAATCCTGATAGCCATGTATAACACGTTTCGGAACATGTATGTTA--TAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
Reference ( gi|1 ) : ATGAAAACTTTACATCGA------------C--------------TT----------------T-----------TGTT---GATGAATATATATTCA-------GGGCT-TAAAAAA---T-TTCAT-TGAAGCTTTAT-------GGCTATATAAATGTTTC-TATGTAATATACTGGG-AACAAA-TCAGATATTACATG----TTT-TTTT-CTGATTAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTAACATTTGAAAAAA--GCATAAAGT----G----C----TAA----GTGCAATAACTGAT-TTTTTT-AAAACATCAGTAACCAGTGTGG-----AC----TCC-------T-------GAATGCATTCCTGAATACGTCA--TCCCTGTGAAC----TT-ATGTA---ACGCTA----AA-----------GGAA-G----------ATGTTGCCATTCCAACAGAAGTGCATTTCAAAGATC-----TTGTATGGTATTAATTTGATGTTTGGAACTGACTCACCGGTCCAATTAATTCCATATGTGTTCTATGGGGTTCATGCTCGGGGTTATAGAGGCATTGCCTCTGATTTCACGTGTATTGCAAATGAAGTCGAGCCCAGAAC--------AG--------CTCAGTGGTGCGCTGTCGAAATATGACCAGTGTATGGCTGACGAGCAGGAACTGGAACACGTTTTTATTTCAAACGGTTTATGATCGTCTGTGC-ATGAACAC--CGACATGCCAAGAAGT-A-TGTG-TTGCAGGTAA-GAAACAATTACGTAGGTGAGTCAACGTAAT-ATTGCGAT---------GAGTACATTA--CGTTGTTGCACGTA-----CGCAACCTGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCAGTTCGCAAGAATATAAAAAGTCTATCTGGAACAGTCAAAATGACGTACAA--CGGTATTTACCAATGACCTGACCCGGAGCATTCAAAGAGTCCGATTTCTCTCAGTTTCAGAAAAACGTGGCATCGCTAAATAAAAG--TG-TTATTTAAAAGAAATTTAA--TTTTTTTTTATCTGTGCTAAGTAACAAGTGATTACTTGTCGGTGT-AAAACC-T---GT--------AG-----GTAAAAAAAC-GGATGTTGCGCACATGCAAAGTATTAAGGAAAA----C---C------TTTTTTGTGCACAGAC---GCAT-GA--ATACT----TCTT----------AT---TTT------------------T-----TAT--------------TTTCCACAATTAAATTCTGATAGCCATGTATAACATGTTTTGGAATATGTATATTATATAACAAAGGAAATGTTCAAACATATAAAGTGTAAAGTTT
gi|2 : ATGAAACTTTTACATCGATTTCAAAGGTGTC--------------TC----------------T-----------TGCT---GATAAATATATATCCA-------TGGCT--AATAAA---T-TATATATGAAACTTTAT-------GGTTATATTATTGTTTCCTA-GTAAT----------------TCAGACGTCGCATG----TTT-TTTT-CTGATCAATTAAGTGAAGAAGGATCAAAATG-----------------AAAATGATCATGTAACATTTGAAAAAT--ACAGAAA-T----A----CA---TAA-----------AACTAAT-TTTTTTTAAAACATCAATAACCAGTGTGG-----AC----TTC---------------------ATTCCTGAAAACGTGA----ACTGTGTAC----TT-A-------ACGCTA----AATGAGCGTGTTTGGAA-T----------ACGTTGCCATTCCAACAGAAGTTCATTTCAGAGATCGTGTATTGTATTGTATTAATTTGATGTTTGGAACTGACCCACTGATCCAGTTCATTTCATACGTGTTCTTTGGGGTTCAGGCTTGGGGTTATATAGGCATTG------GTTTCGCGTGTATTGCAAATGACGT---GCCCATTGC--------AG--------CTCGTTGGCGCGCTTTCAAAATCTCACCAGTGTATGACAGACGAGCACGAATAGAAACACCTGTTTA-------------ATGATAGTCTGTGC-ATGAATAC--CGACACACGAAGGAGT-A-CGTG-TTGCAGGTAA-TAAACGATCAGGTAGGTGAGTCTACGTAAT-AGCGCAAT---------GAGTACTTAA--CGTTGTTGTACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTATCGGTTCGCAAGAATATAAATAATCTATATTGAGCAGCCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGTCCGGATTATACAAAGAGCCTGATTT-TCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG--TGTTTCTTTAAAACAAA--------TTTTTTTTATCCGTGCTAAGCCACGAATGCTTACTTGTTGGTAT-AAAATC-T---GT--------AA-----GTGAATAACC-GGATGTTGCGCAAGTGCAAAG---TAAGGAAAA----CGTTT------TTTTTTGTGCTCGGAC---GCAT-GA--ATACT----TCGTAA--------AT---TTTGGAGAACGAAATGCATAAT-----GAT--------------TATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGTTA---AA-AAAAGAAATATTTAAACATATAAAGTGGAAAGTTT
gi|14 : acgcaaaATTAAAACTTTACATCGA------------C--------------TTCAAAAGTATCTCTT--T-----------TGTT---GATAAATGTATATTCA-------GAG-T-TAAAAAAAATT-TTCAT-TGAAGTTTTAT-------GGCTATATTAATGGTTC-CGTGTAATTTACTGGG-AA-AAA-TCAGACATTACATG----TTT-TTTTTCTAAACAATTAAGTGAAG---GGTCAAAATGAAAATTCCAGAAAAATGAAAATGGTCATGTAACATTTGAAAAAG--ACATGAAGTATTGA----C----TGA----GTTCAATAACTGtcattttg
gi|17 : gacccaaaATGAAAACTTTACATCGA------------CATCAAATGTGTCTCTT----------------T-----------TGCT---AAAAAATATATATTCA-------GGGCT-AAAAAAA---T--------GAAGCTTTAT-------GGCTATATTAATGTTTC-T--------------------------GACATCGCATG----TTT-T-TT-CTGATCAATTAAATGAAGGAGGGTCAAAATGAAAATTCAAGAACAATGAAAATGATCATGTAACAT
gi|19 : ctgacccaaaaATGAAAACTTTACAACGA------------C--------------TTCAAAAGTGTCTCTT--T-----------TGCT---GGCAAATGTATATTCA-------GAGGT-AAAAAAAAGTT-TTCAT-CGAAACTTTTT-------GGCTATATCAATGTTTC-TATGTAATGTATTGGA-AA-ACC-TCAGACATCGCATG----TTT-TGTT-TTAAACAATTGAGTGAAGAA
gi|11 : ctaaaaATGAAAATTTTACGTCGA------------T--------------TT----------------TAAAAGTATCGTTGTTTCTGTTAAATATATGTTCA-------GAGTT-T------------TCAT-CGAGGCTTTAT-------GGCTATATTAATGTTTC-TGCGTGATTTACTGGA-AAAAAACCCAGACATCGCATGTTT-TTT-TTTT-CTAA-AAAATGATTGAAGAAGGGACAAAGTG
gi|15 : gaATGAAAACTTTACATTGA------------C--------------TTCAAAAAAATATATATTT-----------TATT---GATATTTGTATATTCATAGCTGGGGGTT-TT--------T-TTTAT-CGAAGTTTTAA-------TGCTATATCAATGTTT--TGTGCACTTAACTGGGAAATAAA-CTACACATTTCATG----TTTATTTT-TTTAACAATTAATTGAGGA------GAAATGGAAATTCAAGAGAAAACAAATTGATCACACAACA-TTAAAAAAA--Gctgacttagtgcaataactgattttttaaaaacgtcattaaccaatgtagcctcgtatttacgaatgcattcctgaatacgtaatctctataggccaatataacatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|13 : cctaaaAACTTTACATCGA------------C--------------TTCAAAAGTTTCTCTT--T-----------TGCT---GATAAATAAATATTCA-------AGGCT---AAAAACGTT-TTCGT-CGAAGCTTTAC-------GGCTATATTAATGTATC-AGTGTAAAATATTGGG-AAAAAA-TCAGACACCGCATG----TT-----------------AAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTA-------AAAAAG--GCATAAAGT----GCTGAC----TAA----GTGCAATAACTGAT-TCTTTT-AAAACGTCAGTAGCCAGTGTGG-----ACAACATTT-------TAAC----GAATGCATTCCTGAATacaattacaatcctcattgcggtgca
gi|6 : ------------C--------------TT----------------T-----------TGCC---GATAAAAGTTTATTTA-------GAGTTACAAAAAG---TGTTCAT-TGAAACTTTATCATCAGTGGTTAAATTAATGTATC-TGTGCAATTTGCTGGA-AA-GAA-TCATACATCGCATGAGTTTTT-TTTT-CTTAACGATAAAATGAAGAAGATTCAAAATGAAAATTCCAGAAAAGTGAAAATTATCACGTAACATTTGAAAAAG--ACATACAGT----G----CTGAATGA----GTGCAATAACTGA--TTTTTC-AAAACGTCAGTGACCAGTGTGG-----GC----TCA-------TAATTTACGAATGCATTCCTT-ATACGTCATTTCTCTGTACACAAAGTTGATTAA---ACG-TAT---TT-----------GGAA-T----------ACGTTGCCATTCCAACATAAGTGCATTTCGAAGGTC-----GTTTATGGTATCAATTTGACAATTTGACCTGACCCTCCAACCCAGTTCATTCCATACGTGATCTATGGGGTTCAGGCTCGGGGATACAGTGGCATTG
gi|7 : acactgaccccaaatgaaaatctaaaacaaacaaaaaattaacatcgacttcaaacgtttctAATGTTTC-TGTGTAATTTACTGGG-GA-AAA-TCAGAGCTCGCGTG----TTT-TTTT-CTAAACAATTAAGTGAAGAAATGTCAGAATGAAAATTCTAGAAAAATGAAAATGATCACGTAAAATTTGAAAAAAATGC-TGA------------C----TAA----GTGC-ATAAATTGT-TTTTTT-AACACGTCAGTATTTAGTGTGG-----TC----TCCGTTTTTAC-------GAATGCATTCCTGAATACGTCA--TCTCTATGAAC----TT-ACGAA---ATGCTG----AA-----------TGAGCGTGTTTGTATTACGTTGCCATTCCAACAGAAGTGCGTTTGGGAGGGC-----GTTTATGGTATC-------------GACATGACCCGCCGACCCAGTTCATTCCGTACGTATTCTAAAAGGTTCTGGCTTTGGGATACAACGACATTGCCACTtgaacatatttatatatgtgtcg
gi|11 : cttacccaaaatgaaaactttacatgacttcaaaatgtatctcttttgctgttTTGAAGAAG--GGACAAAGT----G----C----TGACTTAGTGCAATAACTGAT-TTTTTA-AAAACGTCATTAACCAATGTAG-----CC----TCG-------TATTTAC-GAATGCATTCCTGAATACGTAA--TCTCTATAGGC----CA-ATATA---AC
gi|3 : gaatgaaaattttacgtcgattttaaaagtatcgttgtttctgttaaatatatgttcagagttttcatcgaggctttatggctatattaatgtttctgcgtgatttactggaaaaaaacccagacatcgcatgttttttttttctaaaaaatgaCATAAAGTCCTGG----C----TAA----GTGCAATAACTGATATTTTTT-AAAACGTCAGTAACCACTGTGG-----AA----TCC-------------------GTTTTTACGAAT--GTAA--TC--TATAAAC----TT-ACGTAGTAACGCTA----AATGAGCGTGTTTGGAA-T----------ATGTTGCCATACAAACAAAAGTGCATTTCGGAAATC-----GTGTATGTTATTAATTTGATGCTTGGACCTGACACACAGAGCCAATTAATTCCATTTGTATTCTATGGGGTTCAGGTTCGGGGTTATAGAGGCATTGCCACTGGTATCGCGTGTATTGatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|4 : aTAAAG-----A----T----TTA----GTGCAATAATTGAT-TTTTTT-AAATCGTTAGTTACCAGTGTGGTGTTTGT----TTT-------TAC-----GAATGCAGTCCTGAATACGTCA--TCTCTATGAGC----TT-ACGTA---ACGTTATATGAACGTGTTT----GGAA-T----------ACGTTGCTATTGCAACAGAAGTGCTTTTTGGAGGTT-----GTTTATGGTATTAATTTGATG-TTGGACCTGGCTCTCCGACCCAGTTCGTTCCATACGTGTTCTATGGGATTCAGGCTCTAGGATACAGAGGCATTGTCACTGGTTTTGCGTGTATTGCAAATAATGTCGTACCCATGACAATCTGGAAG--------CTTTGTGGCGCACTGTCTGAATCTGACCAGTGTATGGCCGACGGGCGCGAATTAGAACATGGTTTTGTCTCAAACGGTTTGTGATCGTCTGTGC-ATGAACACAACAACA--CCAAGGAGT-ACTG-G-TTGCAGGTAA-GAAACGATTACGTAGTTGAGTCAACGAAGT-AGCGCGAT---------GAGTACGTAA--CGTTGTTGCAAGTA-----CGCGACCGGGTCT-GAAACGATCTCTGACATAT--CCAGCAGCATTGTACCAGTTTGCAAGAATAGAAATAGTCTATCTGGAACAGCCAAAATGACATGCAA--CGGTATTTACCAATGACTCGGCCCGGAGCAAACCAATAGCCTGATTTCTCTCAGTTTCAGAATGACTTGGCAT---------------TG-TTTTTTA----------AG--TTTTTTTTTATCTGTGCTTAGCAACAAATGATTACTTGTCGTTGTAAAAACC-T---GT--------AA-----GTGAAAAACC-GGATGTTGCGCACGTGCAAAG---TAAGGAAAAAGTGT---T------TTTTTTNNNNNNNNNNTAGGCATCGATCATACT----Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaacgcaatgagtacgtaacgttgttacacgaacgtaaccgggtctgacgtgagctctgatatatatctggtagtattgtaccggtttgctagaatataaatagtctatctggaataggcaaaatgacgtacaacggtatttaccaatgacccggcccggagcatacaaagtgcctgattcctctcagtttcagaaaggcgtggcatcgctaaataaaagtgttttttaaaacaaatttaattttttttttatctgtgctaagcaacgaacgattactagtcggtgtaaaacctataagtgaaaaaccggatgttgcgcacgtgcaaagtaacgaaaacgttttttttgtgctcggacgcatgaattcttcttaaatgttgaagaaaaaaatggaaaatgattatccgcaattacattctgatagccatgtataacacgttttggaatatgtatgttaacaaaagaaatattcaaacatatgaagtgtgaagttttcatt
gi|9 : taatttttTGCATACGTCA--TCTTTATGAGC----TT-ACGTA---ACGTTG----AATGAGCGTGTTTGGAA-A----------ACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTC-----AATTATGGTATCAATTGGATGTTTGGATCTGACCCTCCGACCTAAGTCATTTCGTAGGTGTTCTATGAGAGTCATGTTCCGGGT------GGTATTGCCACTTGTTTCATGTG-----------ACGTCGTGCCCATAAC--------AGTCCGGAAGCTCTGTGGAGCACTATCGGAATCCGACAAGTGTATGACCGACGAGGACGAATTTGAACACGTTTTTGTCTCAAACGGGCTATAATCGTCTGTGC-GTGAACAT--CGTAACGAAAAGGAGT-ACTG-G-TTGCAGGTAA-GAAACGATTATGTAGGTGTGTCAACGTAAT-AGCGCGAC---------Gtgcctctataatttgaaatattgacaactgctattgaccacgttaaacattttattaaatgttccagaataggttatatatttaaattaatgtaaa
gi|10 : tcccgaagtagtcactggag-----------GGAA-A----------ACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTC-----GATTATGGTATCAATTGGATGATTGGACCTGACCCTCCGGCCTAAGTCATTTCGTAGGTGTTATATGAGAGTCATGCTCCGGGT------GGCATTGCCACTTGTTTTATGTG-----------ACGTCGTGCCCATAAC--------AGTCCGGAAGCTCTGTGGAGCAATATCGTAATCCGACCAGTGTATGACCGACGAGGACGAATTTGAACACGGTTTTGTATCAAACGGGTTATTATCGTCTGTGC-ATGAACAT--CGTCACA-AAAGGAGT-ACTG-G-TTACAGGTAA-GAAACCATTAGGTAGATGTGTCAACGTAAT-AGCGCGAC---------GA
gi|8 : gaatgagcgtgtttCTCGCGGATACAGAGG-----------GTTTCCCGTGTGTTGCAAATGGCGTTGTGTCCATA-C--------AG--------CCCTGTGACGCGCTGTCGGAATCTGACCAGTGTATGGCCGACAAGCACGAACTGAAACAGGATTTTATCTCAAACGGTTTATTATCGCCTGTGC-ATGAACAC--CTTAACGTCAAGGAGT-A-C-TGATTGCATGTCA-GAAACGATTACGTAAGTGAGTCAACGTAAT-ACCGCGAT---------GAGTACGTAA--CGTTGTTGCACGTA-----CGCGAC--GG----GA-------TCTGACAAAT--CCAGTTGTATTGTATCGCTTCGCAAGACTATGAAAAGTCTATCTGGAACAGCAAAAATGACATGCAA--CGGTCTATACCAATG----GAC---AGGCATGCATAAAGCCTGAATTCTATCAGTTTCAGAAATACGTGAGATAGCTA---AAAAGT-TG-TTTTTT
gi|5 : TTTCGAGTGTATTGCAAATGACGTCGTGCCAATAAC--------AGTCTCGAAGCTCTGTGATGCGCTGTTGGAAT----CGAGTGAATGGCCGACAAGCACGAATACGAACACGGTTTTGTTTCAAAAGGCTTATGGTGATATATGC-ATGAACAC--CGTGACGCCGAGGAGT-ACTG-G-TTGCAGGTAATAAAACGATAACGTCGGTGAGGTAACCTTAT-AGCGCGAT---------GCGTACATAA--CGTTGATACACGTATTATACACGACC-GGTCG-GATACGATCTCTGACATAT--CCAGTAGTATTGTACCGCTTCGCAGGAATATAAATAGTCTGCTCGGAACAAACATAATGGCGTGCAA--CGGTATTTACCAATGACCCGACCCGGAGCATACAAATACCTTGATTTCTCTCTGTTTCTGAAAAACGTTACATCG----ATAAAAGTTTG-TTTTTTTAAAGAAG--------TTTTTCTTGTCTGTGCCAAGCAACAAATGATTAATTGTCAGTGT--------------------------------AAAAAACTGGATCTTGCGCACGTGCAAAG---TAAAGAAAA----C---G------TTTTATGTGCTCGGAC---GCAT-GA--ATAGT----TCGG----------AA---ATT------------------TGGAAATATAAATGCATAACGGGTATCCG-AATTAAATCCTGATAGCAATGTATAA-ACGTTTCCGAACATGTATGT----TAACAAAAGAAATATTAAAAC--ATAAAGTGTAAAGTTT
gi|12 : gTGTCAGAATCTGCCCAGTATATGGCCTAAGGGCACGAATAGGGATATATTGATGCCTGAGATGGTTTCTAATAGTCTGACCTATGACC-C--CTAGTTGGTGAGCAGTCA-CA-G-TTGCCGGCAA-AAACCGATTTCGGAGATGGTTCAACGTAAT-GACGCGGTCCTCCTGTAAAG-ACGTTAGACGTTGGTGAGCG---------------GGTCTCGA-ACAGTCACTGACAGAC--CCAGTG---TTG----AGTTTG-AAGACTATGAATTGTCTTTCGGGAGCACCCAAACTAGCGTACAAATCGCTATtcattat
gi|8 : ggccctgtgacggagACGTACTCATCGCGGT---------------ATTA--CGTTGACTCACTTA-----CGTAATCGTTTCT-GACATG
gi|3 : ctcgcggatacagagggtttcccgtgtgttgcaaatggcgttgtgtccatacagccctgtgacgcgctgtcggaatctgaccagtgtatggccgacaagcacgaactgaaacaggattttatctcaaacggtttattatcgcctgtgcatgaacaccttaacgtcaaggagtactgattgGCAAT---------GAGTACGTAA--CGTTGTTACACGAA-----CGTAACCGGGTCT-GACGTGAGCTCTGATATATATCTGGTAGTATTGTACCGGTTTGCTAGAATATAAATAGTCTATCTGGAATAGGCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGTGCCTGATTCCTCTCAGTTTCAGAAAGGCGTGGCATCGCTAAATAAAAG--TG-TTTTTTAAAACAAATTTAAT-TTTTTTTTTATCTGTGCTAAGCAACGAACGATTACTAGTCGGTGT-AAAACC-T---AT--------AA-----GTGAAAAACC-GGATGTTGCGCACGTGCAAAG---TAACGAAAA----CGT-T------TTTTTTGTGCTCGGAC---GCAT-GA--ATTCT----TCTTAA--------AT---GTTGAAGAAAAAAATGGAAAAT-----GAT--------------TATCCGCAATTACATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT----TAACAAAAGAAATATTCAAACATATGAAGTGTGAAGTTTaacgttgttgcacgtacgcgacgggatctgacaaatccagttgtattgtatcgcttcgcaagactatgaaaagtctatctggaacagcaaaaatgacatgcaacggtctataccaatggacaggcatgcataaagcctgaattctatcagtttcagaaatacgtgagatagctaaaaagttgtttttt
gi|18 : acataaagtcctggctaagtgcaataactgatattttttaaaacgtcagtaaccactgtggaatccgtttttacgaatgtaatctataaacttacgtagtaacgctaaatgagcgtgtttggaatatgttgccatacaaacaaaagtgcatttcggaaatcgtgtatgttattaatttgatgcttggacctgacacacagagccaattaattccatttgtattctatggggttcaggttcggggttatagaggcattgccactggtatcgcgtgtattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaac-TTTTTTAAAACAAATT--A--TTTT----TATCTGTGCTACGTAACGAATGATTACCTGTCGATAT-AAAGCC-T----TAAGAAAAAAG-----AGAAAAAAAC-GGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---A--------TTTTGTGCTCGGGC---GTAT-GA--ATACT----TCtcatt
gi|16 : TTAAATGAA--TGAAGGTTTTTTTTTATCTAAGCGAAG-------------CTTGTCAATGT-AAAACC-T---GA--------AAAAAAAGTGAAAAACC-AGTTATTTTGCATTTGGAATGTA---AGGAAAA----C---TGTGTTTTTTTTTGTGCTCGGGT---GAAT-GA--ATACTGAAATGTTGAGAGAAAAAATGCATAA------------------T-----GAT--------------TATCCGCAATTAAATCCCGATTGCCATATATACCACGTTTCAGAACATGCATggaaattttgagaaaaaaaaaatgcataatgattatccgca
gi|20 : TTTATCTGTGGTAAGCAACAAATGATTACTTGTCAGTGT-AAAACCATAAAGT--------AT-----GTAAAATACC-AGATGTGGTGCTTGTGCAAAG---TAAGGAAAA----C---A------TGTTCTGTACTAGGAT---GCAT-GA--A
gi|21 : aGTTTCCGACCATGTATGTTA---ACCAAAGAAAA-ATCCAAACATATAAAGTGTTAAGTTT
Alignments
lowQualScore : 3333333333333 1 1111111 11111111111 1111111 1111111 1111 33333333333333333 666666666666666666666666666 1111 1 22222222 1111 11111 22 33333333 222222222222222222222 333333333333333 666666666666666666666 33333
lowQualScore : 55 777 2222222222222 2 777 4444444 3 11111111111 4 3 4444444 0 11 2222222 9999 4 3 1 1 3 1 44444444444444444 4 5 55 999999999999999999999999999 4 77 888 0 5 0000 7 3 0 1 22 0 22 1 0 666 0 5 0 0 3 11 88888888 0 6 22 2 5 0 5 22 777 6 5 2222 44444 5 3 1 77 0 77 3 1 7777 22 5 1 1 33333333 0 5 5 444444444444444444444 888 777777777777777 888 5 66 66 7 000000000000000000000 1 22222 0
lowQualScore : .. ... ............. . ... ....... . ........... . . ....... . .. ....... .... . . . . . . ................. . . .. ........................... . .. ... . . .... . . . . .. . .. . . ... . . . . . .. ........ . . .. . . . . .. ... . . .... ..... . . . .. . .. . . .... .. . . . ........ . . . ..................... ... ............... ... . .. .. . ..................... . ..... .
lowQualScore : 55 000 0000000000000 0 000 4444444 7 66666666666 4 7 4444444 7 99 7777777 5555 0 1 2 4 0 1 00000000000000000 4 0 44 111111111111111111111111111 5 44 888 5 0 6666 6 8 2 1 99 9 00 4 2 444 0 0 2 1 0 66 66666666 2 2 00 8 0 2 0 00 999 2 0 1111 33333 7 0 4 99 1 99 7 0 7777 22 7 4 7 11111111 1 0 0 222222222222222222222 888 999999999999999 888 0 99 33 5 333333333333333333333 0 88888 8
consensus : ATGAAAACTTTACATCGACTTC--AAAA---GT--CT---C-T---TT-G---CTGATAAATGTATATTCA-------GGGCTA-AAAA-AA--TTTT-CATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTTCTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGT----GCTG----A----GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGN-----C----TCC-----TA------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTC-C-G-AAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTT-ATGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGTACTGGTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTTG---GAG-A-A-AAAATGC-ATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT--TATAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
Reference ( family-961 ) : ATGAAAACTTTACATCGACTTC--AAAA---GT--CT---C-T---TT-G---CTGATAAATGTATATTCA-------GGGCTN-AAAA-AA--TTTT-CATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTTCTAAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGT----GCTG----A----GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGN-----C----TCC-----TA------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTAAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCTCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTC-C-G-AAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATNNGAACACGNTTTTGTCTCAAACGGTTT-ATGATCGTCTGTGC-ATGAACACCGNNACGCCGAGGAGTACCGGTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAANAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCNTAAATNTTG---GAG-A-A-GAAATG--A-AATGATTATCCGCAATTAAATCCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT--TATAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
gi|1 : ATGAAAACTTTACATCGACTT-------------------------TT-G---TTGATGAATATATATTCA-------GGGCTT-AAAA-AA--TTT--CATTGAAGCTTTAT-------GGCTATATAAATGTTTCTATGTAATATACTGGGAAC-AAA--TCAGATATTACATG----TTT-TTTTCTGATTAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTAACATTTGAAAAAAGCATAAAGT----GCTA----A----GTGCA-ATAACTGAT-TTTTTT-AAAACATCAGTAACCAGTGTGGA-----C----TCC-----T-------GAATGCATTCCTGAATACGTCATCCCTGTGAACTTATGTA---ACGCTAAA-----------GGAAGATGTTGCCATTCCAACAGAAGTGCATTTCAAAGATCTTGTAT-G----GTATTAATTTGATGTTTGGAACTGACTCACCGGTCCAATTAATTCCATATGTGTTCTATGGGGTTCATGCTCGGGGTTATAGAGGCATTGCCTC-T-GATT-TCACGTGTATTGCAAATGAAGTCGAGCCCAGAACAG----------CTCAGTGGTGCGCTGTCGAAATATGACCAGTGTATGGCTGACGAGCAGGAACTGGAACACGTTTTTATTTCAAACGGTTT-ATGATCGTCTGTGC-ATGAACACCGACATGCCAAGAAGTATGTGTTGCAGGTAA-GAAACAATTACGTAGGTGAGTCAACGTAATATTGCGATGAGTAC----ATTACGTTGTTGCACGTA-----CGCAACCTGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCAGTTCGCAAGAATATAAAAAGTCTATCTGGAACAGTCAAAATGACGTACAA--CGGTATTTACCAATGACCTGACCCGGAGCATTCAAAGAGTCCGATTTCTCTCAGTTTCAGAAAAACGTGGCATCGCTAAATAAAAG--TGTTA-TTTAAAAGAAATTTAA---TTTTTTTTTATCTGTGCTAAGTAACAAGTGATTACTTGTCGGTGT-AAAACC-T---GTAG-----G--------TAAAAAAACGGATGTTGCGCACATGCAAAGTATTAAGGAAAA----C---C------TTTTTTGTGCACAGAC---GCAT-GA--ATACTTCTT--ATTTT------------------------TTATTTTCCACAATTAAATTCTGATAGCCATGTATAACATGTTTTGGAATATGTATATTATATAACAAAGGAAATGTTCAAACATATAAAGTGTAAAGTTT
gi|10 : AATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCGATTAT-G----GTATCAATTGGATGATTGGACCTGACCCTCCGGCCTAAGTCATTTCGTAGGTGTTATATGAGAGTCATGCTCCGGGT------GGCATTGCCACTT-G-TT-T------TAT-----GTGACGTCGTGCCCATAACAGTC-CGG-AAGCTCTGTGGAGCAATATCGTAATCCGACCAGTGTATGACCGACGAGGACGAATTTGAACACGGTTTTGTATCAAACGGGTT-ATTATCGTCTGTGC-ATGAACATCGTCACA-AAAGGAGTACTGGTTACAGGTAA-GAAACCATTAGGTAGATGTGTCAACGTAATAGCGCGACGA
gi|11 : gATGAAAATTTTACGTCGATTTT--AAAA---GT--AT---C-G---TT-GTTTCTGTTAAATATATGTTCA-------GAG-------------TTTT-CATCGAGGCTTTAT-------GGCTATATTAATGTTTCTGCGTGATTTACTGGAAA--AAAACCCAGACATCGCATGTTT-TTT-TTTTCTAAAAAA-TGATTGAAGAAGGGACAAAGTG
gi|11 : gaTTGAAGAAGGGACAAAGT----GCTG----ACTTAGTGCA-ATAACTGAT-TTTTTA-AAAACGTCATTAACCAATGTAGC-----C----TCG-----TATTTAC-GAATGCATTCCTGAATACGTAATCTCTATAGGCCAATATA---ACctgacttagtgcaataactgattttttaaaaacgtcattaaccaatgtagcctcgtatttacgaatgcattcctgaatacgtaatctctataggccaatataacatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|12 : gaatgaaaattttacgtcgattttaaaagtatcgttgtttctgttaaatatatgttcagagttttcatcgaggctttatggctatattaatgtttctgcgtgatttactggaaaaaaacccagacatcgcatgttttttttttctaaaaaatgaGCCCTGTGACGGAGTGTCAGAATCTGCCCAGTATATGGCCTAAGGGCACGAATAGGGATATATTGATGCCTGAGATGGTTT-CTAATAGTCTGACCTATGACC-CCTAGTTGGTGAGCAGTCACAGTTGCCGGCAA-AAACCGATTTCGGAGATGGTTCAACGTAATGACGCG----GTCCTCCTGTAAAGACGTTAGACGTT-----GGTGAGCGGGTCTCGA-ACAGTCACTGACAGAC--CC---AGTGTTG----AGTTTG-AAGACTATGAATTGTCTTTCGGGAGCACCCAAACTAGCGTACAAATCGCTATatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|13 : gAACTTTACATCGACTTC--AAAA---GT--TT---C-TCTTTT-G---CTGATAAATAAATATTCA-------AGGCTA-AAAA-CG--TTTT-CGTCGAAGCTTTAC-------GGCTATATTAATGTATCAGTGTAAAATATTGGGAA--AAAA-TCAGACACCGCATG----TT----------------AAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTA-------AAAAAGGCATAAAGT----GCTGACTAA----GTGCA-ATAACTGAT-TCTTTT-AAAACGTCAGTAGCCAGTGTGGA-----CAACATTT-----TAAC----GAATGCATTCCTGAAT
gi|14 : ATTAAAACTTTACATCGACTTC--AAAA---GTATCT---C-T---TTTG---TTGATAAATGTATATTCA-------GAGTTA-AAAAAAA--TTTT-CATTGAAGTTTTAT-------GGCTATATTAATGGTTCCGTGTAATTTACTGGGAA--AAA--TCAGACATTACATGT---TTT-TTTTCTAAACAATTAAGT---GAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGGTCATGTAACATTTGAAAAAGACATGAAGTATTGACTG----A----GTTCA-ATAACTG
gi|15 : gacccaaaATGAAAACTTTACATTGACTTCAAAAAA---AT--ATATAT-T---TT-A---TTGATATTTGTATATTCATAGCTGGGGGTTT----------TTTT-TATCGAAGTTTTAA-------TGCTATATCAATGTTT-TGTGCACTTAACTGGGAAATAAA--CTACACATTTCATG----TTTATTTTTTTAACAATTAATTGAGGA------GAAATGGAAATTCAAGAGAAAACAAATTGATCACACAACATTAAAAAAAGACA
gi|16 : cctaaaAAATGAA--TGAAGGTTTTTTTTTATCT-----AAGC---GAA-----GCTTGTCAATGT-AAAACC-T---GAAAAAAAAG--------TGAAAAACCAGTTATTTTGCATTTGGAATG---TAAGGAAAA----C---TGTGTTTTTTTTTGTGCTCGGGT---GAAT-GA--ATACT---GAAATGTTGA--GAG-A-A-AAAATGC-ATAATGATTATCCGCAATTAAATCCCGATTGCCATATATACCACGTTTCAGAACATGCATattacaatcctcattgcggtgca
gi|17 : ttATGAAAACTTTACATCGACATC--AAAT---GTGTCT---C-T---TTTG---CTAAAAAATATATATTCA-------GGGCTA-AAAA-AA--T--------GAAGCTTTAT-------GGCTATATTAATGTTTCT---------------------------GACATCGCATG-----TT-TTTTCTGATCAATTAAATGAAGGAGGGTCAAAATGAAAATTCAAGAACAATGAAAATGATCATGTAACAT
gi|18 : ctgacccaaaaTTT-TTTAAAACAAA--TTA---TTTT----TATCTGTGCTACGTAACGAATGATTACCTGTCGATAT-AAAGCC-T----TAA-----GAAAAAAGAGAAAAAAACGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C-----------ATTTTGTGCTCGGGC---GTAT-GA--ATACTTCGGAAATTTTGAGAAAA-A-A-AAAATGC-ATAATGATTATCCGCA
gi|19 : ATGAAAACTTTACAACGACTTC--AAAA---GTGTCT---C-T---TTTG---CTGGCAAATGTATATTCA-------GAGGTA-AAAA-AAAGTTTT-CATCGAAACTTTTT-------GGCTATATCAATGTTTCTATGTAATGTATTGGAAA--ACC--TCAGACATCGCATG----TTT-TGTTTTAAACAATTGAGTGAAGAA
gi|2 : ctaaaaATGAAACTTTTACATCGATTTC--AAAG---GT--GT---C-TC--TT-G---CTGATAAATATATATCCA-------TGGCT--AATA-AA--TTATATAT-GAAACTTTAT-------GGTTATATTATTGTTTCCTAGTAATT-----------------CAGACGTCGCATG----TTT-TTTTCTGATCAATTAAGTGAAGAAGGATCAAAATGAAAAT-----------------GATCATGTAACATTTGAAAAATACAGAAA--------------------TACATAAAACTAAT-TTTTTTTAAAACATCAATAACCAGTGTGGA-----C----TTC-------------------ATTCCTGAAAACGTGAACT--GTG----TACTTA---ACGCTAAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTTCATTTCAGAGATCGTGTATTGTATTGTATTAATTTGATGTTTGGAACTGACCCACTGATCCAGTTCATTTCATACGTGTTCTTTGGGGTTCAGGCTTGGGGTTATATAGGCATTG-------G-TT-TCGCGTGTATTGCAAATGA---CGTGCCCAT--------T-G-CAGCTCGTTGGCGCGCTTTCAAAATCTCACCAGTGTATGACAGACGAGCACGAATAGAAACAC--------CT------GTTTAATGATAGTCTGTGC-ATGAATACCGACACACGAAGGAGTACGTGTTGCAGGTAA-TAAACGATCAGGTAGGTGAGTCTACGTAATAGCGCAATGAGTAC----TTAACGTTGTTGTACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTATCGGTTCGCAAGAATATAAATAATCTATATTGAGCAGCCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGTCCGGATTATACAAAGAGCCTGATTT-TCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG--TGTTTCTTTAAAACAAA---------TTTTTTTTATCCGTGCTAAGCCACGAATGCTTACTTGTTGGTAT-AAAATC-T---GTAA-----G--------TGAATAACCGGATGTTGCGCAAGTGCAAAG---TAAGGAAAA----CGTTT------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGTAAATTTTG---GAG-A-ACGAAATGC-ATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT--TA-AA-AAAAGAAATATTTAAACATATAAAGTGGAAAGTTT
gi|20 : acgcaaaTTTATCTGTGGTAAGCAACAAATGATTACTTGTCAGTGT-AAAACCATAAAGTAT-----G--------TAAAATACCAGATGTGGTGCTTGTGCAAAG---TAAGGAAAA----C---A------TGTTCTGTACTAGGAT---GCAT-GA--Atcattttg
gi|21 : aGTTTCCGACCATGTATGT--TA--ACCAAAGAAAAATCCAAACATATAAAGTGTTAAGTTT
gi|3 : CATAAAGTCCTGGCTA----A----GTGCA-ATAACTGATATTTTTT-AAAACGTCAGTAACCACTGTGGA-----A----TCC-----------------GTTTTTACGAAT--GTAATCT--ATAAACTTACGTAGTAACGCTAAATGAGCGTGTTTGGAATATGTTGCCATACAAACAAAAGTGCATTTCGGAAATCGTGTAT-G----TTATTAATTTGATGCTTGGACCTGACACACAGAGCCAATTAATTCCATTTGTATTCTATGGGGTTCAGGTTCGGGGTTATAGAGGCATTGCCAC-T-G-GTATCGCGTGTATTGtcgt
gi|3 : aAAAAACGCAATGAGTAC----GTAACGTTGTTACACGAA-----CGTAACCGGGTCT-GACGTGAGCTCTGATATATATCTGGTAGTATTGTACCGGTTTGCTAGAATATAAATAGTCTATCTGGAATAGGCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGTGCCTGATTCCTCTCAGTTTCAGAAAGGCGTGGCATCGCTAAATAAAAG--TGTTT-TTTAAAACAAATTTAAT--TTTTTTTTTATCTGTGCTAAGCAACGAACGATTACTAGTCGGTGT-AAAACC-T---ATAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAACGAAAA----CGT-T------TTTTTTGTGCTCGGAC---GCAT-GA--ATTCTTCTTAAATGTTG---AAGAA-A-AAAATGGAA-AATGATTATCCGCAATTACATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT----TAACAAAAGAAATATTCAAACATATGAAGTGTGAAGTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaacgcaatgagtacgtaacgttgttacacgaacgtaaccgggtctgacgtgagctctgatatatatctggtagtattgtaccggtttgctagaatataaatagtctatctggaataggcaaaatgacgtacaacggtatttaccaatgacccggcccggagcatacaaagtgcctgattcctctcagtttcagaaaggcgtggcatcgctaaataaaagtgttttttaaaacaaatttaattttttttttatctgtgctaagcaacgaacgattactagtcggtgtaaaacctataagtgaaaaaccggatgttgcgcacgtgcaaagtaacgaaaacgttttttttgtgctcggacgcatgaattcttcttaaatgttgaagaaaaaaatggaaaatgattatccgcaattacattctgatagccatgtataacacgttttggaatatgtatgttaacaaaagaaatattcaaacatatgaagtgtgaagttttcatt
gi|4 : acataaagtcctggctaagtgcaataactgatattttttaaaacgtcagtaaccactgtggaatccgtttttacgaatgtaatctataaacttacgtagtaacgctaaatgagcgtgtttggaatatgttgccatacaaacaaaagtgcatttcggaaatcgtgtatgttattaatttgatgcttggacctgacacacagagccaattaattccatttgtattctatggggttcaggttcggggttatagaggcattgccactggtatcgcgtgtattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAAAG-----ATTT----A----GTGCA-ATAATTGAT-TTTTTT-AAATCGTTAGTTACCAGTGTGGTGTTTGT----TTT-----TAC-----GAATGCAGTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGTTATATGAACGTGTTTGGAATACGTTGCTATTGCAACAGAAGTGCTTTTTGGAGGTTGTTTAT-G----GTATTAATTTGATG-TTGGACCTGGCTCTCCGACCCAGTTCGTTCCATACGTGTTCTATGGGATTCAGGCTCTAGGATACAGAGGCATTGTCAC-T-GGTT-TTGCGTGTATTGCAAATAATGTCGTACCCATGACAATC-T-GGAAGCTTTGTGGCGCACTGTCTGAATCTGACCAGTGTATGGCCGACGGGCGCGAATTAGAACATGGTTTTGTCTCAAACGGTTT-GTGATCGTCTGTGC-ATGAACACAACAACACCAAGGAGTACTGGTTGCAGGTAA-GAAACGATTACGTAGTTGAGTCAACGAAGTAGCGCGATGAGTAC----GTAACGTTGTTGCAAGTA-----CGCGACCGGGTCT-GAAACGATCTCTGACATAT--CCAGCAGCATTGTACCAGTTTGCAAGAATAGAAATAGTCTATCTGGAACAGCCAAAATGACATGCAA--CGGTATTTACCAATGACTCGGCCCGGAGCAAACCAATAGCCTGATTTCTCTCAGTTTCAGAATGACTTGGCA---------------TTGTTT-TTTA----------AG---TTTTTTTTTATCTGTGCTTAGCAACAAATGATTACTTGTCGTTGTAAAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAAAGTGT---T------TTTTTTNNNNNNNNNNTAGGCATCGATCATACTTtcatt
gi|5 : taattttt-G-TT-TCGAGTGTATTGCAAATGACGTCGTGCCAATAACAGTCTC-G-AAGCTCTGTGATGCGCTGTTGGAATC-GA---GTGAATGGCCGACAAGCACGAATACGAACACGGTTTTGTTTCAAAAGGCTT-ATGGTGATATATGC-ATGAACACCGTGACGCCGAGGAGTACTGGTTGCAGGTAATAAAACGATAACGTCGGTGAGGTAACCTTATAGCGCGATGCGTAC----ATAACGTTGATACACGTATTATACACGACCGG-TCG-GATACGATCTCTGACATAT--CCAGTAGTATTGTACCGCTTCGCAGGAATATAAATAGTCTGCTCGGAACAAACATAATGGCGTGCAA--CGGTATTTACCAATGACCCGACCCGGAGCATACAAATACCTTGATTTCTCTCTGTTTCTGAAAAACGTTACATCG----ATAAAAGTTTGTTT-TTT----TAAA--GAA---GTTTTTCTTGTCTGTGCCAAGCAACAAATGATTAATTGTCAGTGT-A------------------------------AAAAACTGGATCTTGCGCACGTGCAAAG---TAAAGAAAA----C---G------TTTTATGTGCTCGGAC---GCAT-GA--ATAGTTCGGAAAT-TTG---GAA-ATA-TAAATGC-ATAACGGGTATCCG-AATTAAATCCTGATAGCAATGTATAA-ACGTTTCCGAACATGTATGT----TAACAAAAGAAATATTAAAAC--ATAAAGTGTAAAGTTTtgcctctataatttgaaatattgacaactgctattgaccacgttaaacattttattaaatgttccagaataggttatatatttaaattaatgtaaa
gi|6 : AAAAATTAACATCGACTTC--AAAC---GT--TT---C-TCTTTT-G---CCGATAAAAGTTTATTTA-------GAGTTACAAAA-AG--TGTT-CATTGAAACTTTATCATCAGTGGTTAAATTAATGTATCTGTGCAATTTGCTGGAAA--GAA--TCATACATCGCATGAGTTTTT-TTTTCTTAACGATAAAATGAAGAAGATTCAAAATGAAAATTCCAGAAAAGTGAAAATTATCACGTAACATTTGAAAAAGACATACAGT----GCTG----AATGAGTGCA-ATAACTGAT-TTTTC--AAAACGTCAGTGACCAGTGTGGG-----C----TCA-----TAATTTACGAATGCATTCCTTA-TACGTCATTTCTCTG----TACACA---AAGTTGATTAAACGTATTTGGAATACGTTGCCATTCCAACATAAGTGCATTTCGAAGGTCGTTTAT-G----GTATCAATTTGACAATTTGACCTGACCCTCCAACCCAGTTCATTCCATACGTGATCTATGGGGTTCAGGCTCGGGGATACAGTGGCATTGtcattat
gi|7 : acactgaccccaaatgaaaatctaaaacaaacaATGAAAACTTTACAT-GACTTC--AAAATGTAT--CT---CTT---TT-G---CTGTTAAtgaacatatttatatatgtgtcg
gi|7 : cttacccaaaTGTTAATGTTTCTGTGTAATTTACTGGGGA--AAA--TCAGAGCTCGCGTG----TTT-TTTTCTAAACAATTAAGTGAAGAAATGTCAGAATGAAAATTCTAGAAAAATGAAAATGATCACGTAAAATTTGAAA-------AAAAT----GCTGACTAA----GTGC--ATAAATTGT-TTTTTT-AACACGTCAGTATTTAGTGTGGT-----C----TCCGTTTTTAC-----GAATGCATTCCTGAATACGTCATCTCTATGAACTTACGAA---ATGCTGAATGAGCGTGTTTGTATTACGTTGCCATTCCAACAGAAGTGCGTTTGGGAGGGCGTTTAT-G----GTATC-------------GACATGACCCGCCGACCCAGTTCATTCCGTACGTATTCTAAAAGGTTCTGGCTTTGGGATACAACGACATTGCCAC-T-tgtttctgtgtaatttactggggaaaatcagagctcgcgtgtttttttctaaacaattaagtgaagaaatgtcagaatgaaaattctagaaaaatgaaaatgatcacgtaaaatttgaaaaaaatgctgactaagtgcataaattgtttttttaacacgtcagtatttagtgtggtctccgtttttacgaatgcattcctgaatacgtcatctctatgaacttacgaaatgctgaatgagcgtgtttgtattacgttgccattccaacagaagtgcgtttgggagggcgtttatggtatcgacatgacccgccgacccagttcattccgtacgtattctaaaaggttctggctttgggatacaacgacattgccact
gi|8 : cttacccaaaatgaaaactttacatgacttcaaaatgtatctcttttgcCTCGCGGATACAGAGG------------G-TT-TCCCGTGTGTTGCAAATGGCGTTGTGTCCATA-------C----AGCCCTGTGACGCGCTGTCGGAATCTGACCAGTGTATGGCCGACAAGCACGAACTGAAACAGGATTTTATCTCAAACGGTTT-ATTATCGCCTGTGC-ATGAACACCTTAACGTCAAGGAGTACTGATTGCATGTCA-GAAACGATTACGTAAGTGAGTCAACGTAATACCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACGGGATCT-GACA-----------A-AT--CCAGTTGTATTGTATCGCTTCGCAAGACTATGAAAAGTCTATCTGGAACAGCAAAAATGACATGCAA--CGGTCTATACCAATGGACAG-------GCATGCATAAAGCCTGAATTCTATCAGTTTCAGAAATACGTGAGATAGCTA---AAAAG-TTGTTT-TTT
gi|9 : TGCATACGTCATCTTTATGAGCTTACGTA---ACGTTGAATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCAATTAT-G----GTATCAATTGGATGTTTGGATCTGACCCTCCGACCTAAGTCATTTCGTAGGTGTTCTATGAGAGTCATGTTCCGGGT------GGTATTGCCAC-TTG-TT-TCATGTG-----------ACGTCGTGCCCATAACAGTC-C-GGAAGCTCTGTGGAGCACTATCGGAATCCGACAAGTGTATGACCGACGAGGACGAATTTGAACACGTTTTTGTCTCAAACGGGCT-ATAATCGTCTGTGC-GTGAACATCGTAACGAAAAGGAGTACTGGTTGCAGGTAA-GAAACGATTATGTAGGTGTGTCAACGTAATAGCGCGACG
Alignments
lowQualScore : 3333333333333 1 11111 1111111 1111111 1111 33333333333333333 666666666666666666666666666 1111 1 22222222 1111 11111 22 33333333 222222222222222222222 333333333333333 222222222222 33333
lowQualScore : 55 777 2222222222222 2 777 1 4 4 22222 2 2 3 4444444 0 11 2222222 9999 4 3 1 1 3 1 44444444444444444 4 5 55 999999999999999999999999999 4 77 888 0 5 0000 7 1 0 1 22 0 22 1 0 666 0 5 0 0 11 88888888 0 6 22 2 5 0 5 22 55 5 0 5 5 2222 44444 5 3 1 77 0 77 3 1 7777 22 5 1 1 33333333 0 5 5 444444444444444444444 888 777777777777777 888 5 66 11 444444444444 1 22222 0
lowQualScore : .. ... ............. . ... . . . ..... . . . ....... . .. ....... .... . . . . . . ................. . . .. ........................... . .. ... . . .... . . . . .. . .. . . ... . . . . .. ........ . . .. . . . . .. .. . . . . .... ..... . . . .. . .. . . .... .. . . . ........ . . . ..................... ... ............... ... . .. .. ............ . ..... .
lowQualScore : 55 000 0000000000000 0 000 9 4 4 66666 0 0 7 4444444 7 99 7777777 5555 0 9 2 4 0 1 00000000000000000 4 0 44 111111111111111111111111111 5 44 888 5 0 6666 6 0 2 1 99 9 00 4 2 444 0 0 2 1 66 66666666 2 2 11 8 0 2 0 00 99 0 1 0 0 1111 33333 7 0 4 99 1 99 7 0 7777 22 7 4 7 11111111 1 0 0 222222222222222222222 888 999999999999999 888 0 99 77 222222222222 0 88888 8
consensus : ATGAAAACTTTACATCGACTTC--AAAA---GT--CT---C-T---TT-G---CTGATAAATGTATATTCAGGGCTA-AAA-A-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTTCTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGT----GCTG----A----GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGN-----C----TCC-----TA------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTC-C-G-AAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTTG---GAG-A-A-AAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT--TATAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
Reference ( family-961 ) : ATGAAAACTTTACATCGACTTC--AAAA---GT--CT---C-T---TT-G---CTGATAAATGTATATTCAGGGCTA-AAA-A-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTTCTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGT----GCTG----A----GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGN-----C----TCC-----TA------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTC-C-G-AAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTTG---GAG-A-A-AAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT--TATAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
gi|1 : ATGAAAACTTTACATCGACTT-------------------------TT-G---TTGATGAATATATATTCAGGGCTT-AAA-A-AA--TTT-CATTGAAGCTTTAT-------GGCTATATAAATGTTTCTATGTAATATACTGGGAAC-AAA--TCAGATATTACATG----TTT-TTTTCTGATTAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTAACATTTGAAAAAAGCATAAAGT----GCTA----A----GTGCA-ATAACTGAT-TTTTTT-AAAACATCAGTAACCAGTGTGGA-----C----TCC-----T-------GAATGCATTCCTGAATACGTCATCCCTGTGAACTTATGTA---ACGCTAAA-----------GGAAGATGTTGCCATTCCAACAGAAGTGCATTTCAAAGATCTTGTAT-G----GTATTAATTTGATGTTTGGAACTGACTCACCGGTCCAATTAATTCCATATGTGTTCTATGGGGTTCATGCTCGGGGTTATAGAGGCATTGCCTC-T-GATT-TCACGTGTATTGCAAATGAAGTCGAGCCCAGAACAG----------CTCAGTGGTGCGCTGTCGAAATATGACCAGTGTATGGCTGACGAGCAGGAACTGGAACACGTTTTTATTTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGACATGCCAAGAAGT-A-TGTGTTGCAGGTAA-GAAACAATTACGTAGGTGAGTCAACGTAATATTGCGATGAGTAC----ATTACGTTGTTGCACGTA-----CGCAACCTGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCAGTTCGCAAGAATATAAAAAGTCTATCTGGAACAGTCAAAATGACGTACAA--CGGTATTTACCAATGACCTGACCCGGAGCATTCAAAGAGTCCGATTTCTCTCAGTTTCAGAAAAACGTGGCATCGCTAAATAAAAG--TGTTA-TTTAAAAGAAATTTAA---TTTTTTTTTATCTGTGCTAAGTAACAAGTGATTACTTGTCGGTGT-AAAACC-T---GTAG-----G--------TAAAAAAACGGATGTTGCGCACATGCAAAGTATTAAGGAAAA----C---C------TTTTTTGTGCACAGAC---GCAT-GA--ATACTTCTT--ATTTT-----------------------TTATTTTCCACAATTAAATTCTGATAGCCATGTATAACATGTTTTGGAATATGTATATTATATAACAAAGGAAATGTTCAAACATATAAAGTGTAAAGTTT
gi|10 : GAATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCGATTAT-G----GTATCAATTGGATGATTGGACCTGACCCTCCGGCCTAAGTCATTTCGTAGGTGTTATATGAGAGTCATGCTCCGGGT------GGCATTGCCACTT-G-TT-T------TAT-----GTGACGTCGTGCCCATAACAGTC-CGG-AAGCTCTGTGGAGCAATATCGTAATCCGACCAGTGTATGACCGACGAGGACGAATTTGAACACGGTTTTGTATCAAACGGGTTA-TTATCGTCTGTGC-ATGAACATCGTCACA-AAAGGAGT-ACTG-GTTACAGGTAA-GAAACCATTAGGTAGATGTGTCAACGTAATAGCGCGACGA
gi|11 : ATGAAAATTTTACGTCGATTTT--AAAA---GT--AT---C-G---TT-GTTTCTGTTAAATATATGTTCAGAG--------------TTTTCATCGAGGCTTTAT-------GGCTATATTAATGTTTCTGCGTGATTTACTGGAAA--AAAACCCAGACATCGCATGTTT-TTT-TTTTCTAAAAAA-TGATTGAAGAAGGGACAAAGTG
gi|11 : gaTTGAAGAAGGGACAAAGT----GCTG----ACTTAGTGCA-ATAACTGAT-TTTTTA-AAAACGTCATTAACCAATGTAGC-----C----TCG-----TATTTAC-GAATGCATTCCTGAATACGTAATCTCTATAGGCCAATATA---ACctgacttagtgcaataactgattttttaaaaacgtcattaaccaatgtagcctcgtatttacgaatgcattcctgaatacgtaatctctataggccaatataacatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|12 : gaatgaaaattttacgtcgattttaaaagtatcgttgtttctgttaaatatatgttcagagttttcatcgaggctttatggctatattaatgtttctgcgtgatttactggaaaaaaacccagacatcgcatgttttttttttctaaaaaatgaGCCCTGTGACGGAGTGTCAGAATCTGCCCAGTATATGGCCTAAGGGCACGAATAGGGATATATTGATGCCTGAGATGGTTTC-TAATAGTCTGACCTATG-ACCCCTAGTTGGTGAGCAGTCAC-A-GTTGCCGGCAA-AAACCGATTTCGGAGATGGTTCAACGTAATGACGCG----GTCCTCCTGTAAAGACGTTAGACGTT-----GGTGAGCGGGTCTCGA-ACAGTCACTGACAGAC--CC---AGTGTTG----AGTTTG-AAGACTATGAATTGTCTTTCGGGAGCACCCAAACTAGCGTACAAATCGCTATatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|13 : gAACTTTACATCGACTTC--AAAA---GT--TT---C-TCTTTT-G---CTGATAAATAAATATTCAAGGCTA-AAA-A-CG--TTTTCGTCGAAGCTTTAC-------GGCTATATTAATGTATCAGTGTAAAATATTGGGAA--AAAA-TCAGACACCGCATG----TT----------------AAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTA-------AAAAAGGCATAAAGT----GCTGACTAA----GTGCA-ATAACTGAT-TCTTTT-AAAACGTCAGTAGCCAGTGTGGA-----CAACATTT-----TAAC----GAATGCATTCCTGAAT
gi|14 : ATTAAAACTTTACATCGACTTC--AAAA---GTATCT---C-T---TTTG---TTGATAAATGTATATTCAGAGTTA-AAAAA-AA--TTTTCATTGAAGTTTTAT-------GGCTATATTAATGGTTCCGTGTAATTTACTGGGAA--AAA--TCAGACATTACATGT---TTT-TTTTCTAAACAATTAAGT---GAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGGTCATGTAACATTTGAAAAAGACATGAAGTATTGACTG----A----GTTCA-ATAACTG
gi|15 : gacccaaaATGAAAACTTTACATTGACTTCAAAAAA---AT--ATATAT-T---TT-A---TTGATATTTGTATATTCATAGCTG-GGG-GTTT--TTTTTATCGAAGTTTTAA-------TGCTATATCAATGTTT-TGTGCACTTAACTGGGAAATAAA--CTACACATTTCATG----TTTATTTTTTTAACAATTAATTGAGGA------GAAATGGAAATTCAAGAGAAAACAAATTGATCACACAACATTAAAAAAAGACA
gi|16 : cctaaaAAATGAA--TGAAGGTTTTTTTTTATCT-----AAGC---GAA-----GCTTGTCAATGT-AAAACC-T---GAAAAAAAAG--------TGAAAAACCAGTTATTTTGCATTTGGAATG---TAAGGAAAA----C---TGTGTTTTTTTTTGTGCTCGGGT---GAAT-GA--ATACT---GAAATGTTGA--GAG-A-A-AAAATGCATAATGATTATCCGCAATTAAATCCCGATTGCCATATATACCACGTTTCAGAACATGCATattacaatcctcattgcggtgca
gi|17 : ttATGAAAACTTTACATCGACATC--AAAT---GTGTCT---C-T---TTTG---CTAAAAAATATATATTCAGGGCTA-AAA-A-AA--T-------GAAGCTTTAT-------GGCTATATTAATGTTTCT---------------------------GACATCGCATG-----TT-TTTTCTGATCAATTAAATGAAGGAGGGTCAAAATGAAAATTCAAGAACAATGAAAATGATCATGTAACAT
gi|18 : ctgacccaaaaTTT-TTTAAAACAAA--TTA---TTTT----TATCTGTGCTACGTAACGAATGATTACCTGTCGATAT-AAAGCC-T----TAA-----GAAAAAAGAGAAAAAAACGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C-----------ATTTTGTGCTCGGGC---GTAT-GA--ATACTTCGGAAATTTTGAGAAAA-A-A-AAAATGCATAATGATTATCCGCA
gi|19 : ATGAAAACTTTACAACGACTTC--AAAA---GTGTCT---C-T---TTTG---CTGGCAAATGTATATTCAGAGGTA-AAA-A-AAAGTTTTCATCGAAACTTTTT-------GGCTATATCAATGTTTCTATGTAATGTATTGGAAA--ACC--TCAGACATCGCATG----TTT-TGTTTTAAACAATTGAGTGAAGAA
gi|2 : ctaaaaATGAAACTTTTACATCGATTTC--AAAG---GT--GT---C-TC--TT-G---CTGATAAATATATATCCATGGCTA-ATA-A-AT--TATATAT-GAAACTTTAT-------GGTTATATTATTGTTTCCTAGTAATT-----------------CAGACGTCGCATG----TTT-TTTTCTGATCAATTAAGTGAAGAAGGATCAAAATGAAAAT-----------------GATCATGTAACATTTGAAAAATACAGAAA--------------------TACATAAAACTAAT-TTTTTTTAAAACATCAATAACCAGTGTGGA-----C----TTC-------------------ATTCCTGAAAACGTGAACT--GTG----TACTTA---ACGCTAAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTTCATTTCAGAGATCGTGTATTGTATTGTATTAATTTGATGTTTGGAACTGACCCACTGATCCAGTTCATTTCATACGTGTTCTTTGGGGTTCAGGCTTGGGGTTATATAGGCATTG-------G-TT-TCGCGTGTATTGCAAATGACGT---GCCCAT--------T-G-CAGCTCGTTGGCGCGCTTTCAAAATCTCACCAGTGTATGACAGACGAGCACGAATAGAAACAC--------CT------GTTTAATGATAGTCTGTGC-ATGAATACCGACACACGAAGGAGT-ACGT-GTTGCAGGTAA-TAAACGATCAGGTAGGTGAGTCTACGTAATAGCGCAATGAGTAC----TTAACGTTGTTGTACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTATCGGTTCGCAAGAATATAAATAATCTATATTGAGCAGCCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGTCCGGATTATACAAAGAGCCTGATTT-TCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG--TGTTTCTTTAAAACAAA---------TTTTTTTTATCCGTGCTAAGCCACGAATGCTTACTTGTTGGTAT-AAAATC-T---GTAA-----G--------TGAATAACCGGATGTTGCGCAAGTGCAAAG---TAAGGAAAA----CGTTT------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGTAAATTTTG---GAG-A-ACGAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT--TA-AA-AAAAGAAATATTTAAACATATAAAGTGGAAAGTTT
gi|20 : acgcaaaTTTATCTGTGGTAAGCAACAAATGATTACTTGTCAGTGT-AAAACCATAAAGTAT-----G--------TAAAATACCAGATGTGGTGCTTGTGCAAAG---TAAGGAAAA----C---A------TGTTCTGTACTAGGAT---GCAT-GA--Atcattttg
gi|21 : aGTTTCCGACCATGTATGT--TA--ACCAAAGAAAAATCCAAACATATAAAGTGTTAAGTTT
gi|3 : CATAAAGTCCTGGCTA----A----GTGCA-ATAACTGATATTTTTT-AAAACGTCAGTAACCACTGTGGA-----A----TCC-----------------GTTTTTACGAAT--GTAATCT--ATAAACTTACGTAGTAACGCTAAATGAGCGTGTTTGGAATATGTTGCCATACAAACAAAAGTGCATTTCGGAAATCGTGTAT-G----TTATTAATTTGATGCTTGGACCTGACACACAGAGCCAATTAATTCCATTTGTATTCTATGGGGTTCAGGTTCGGGGTTATAGAGGCATTGCCAC-T-G-GTATCGCGTGTATTGtcgt
gi|3 : aAAAAACGCAATGAGTAC----GTAACGTTGTTACACGAA-----CGTAACCGGGTCT-GACGTGAGCTCTGATATATATCTGGTAGTATTGTACCGGTTTGCTAGAATATAAATAGTCTATCTGGAATAGGCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGTGCCTGATTCCTCTCAGTTTCAGAAAGGCGTGGCATCGCTAAATAAAAG--TGTTT-TTTAAAACAAATTTAAT--TTTTTTTTTATCTGTGCTAAGCAACGAACGATTACTAGTCGGTGT-AAAACC-T---ATAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAACGAAAA----CGT-T------TTTTTTGTGCTCGGAC---GCAT-GA--ATTCTTCTTAAATGTTG---AAGAA-A-AAAATGGAAAATGATTATCCGCAATTACATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT----TAACAAAAGAAATATTCAAACATATGAAGTGTGAAGTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaacgcaatgagtacgtaacgttgttacacgaacgtaaccgggtctgacgtgagctctgatatatatctggtagtattgtaccggtttgctagaatataaatagtctatctggaataggcaaaatgacgtacaacggtatttaccaatgacccggcccggagcatacaaagtgcctgattcctctcagtttcagaaaggcgtggcatcgctaaataaaagtgttttttaaaacaaatttaattttttttttatctgtgctaagcaacgaacgattactagtcggtgtaaaacctataagtgaaaaaccggatgttgcgcacgtgcaaagtaacgaaaacgttttttttgtgctcggacgcatgaattcttcttaaatgttgaagaaaaaaatggaaaatgattatccgcaattacattctgatagccatgtataacacgttttggaatatgtatgttaacaaaagaaatattcaaacatatgaagtgtgaagttttcatt
gi|4 : acataaagtcctggctaagtgcaataactgatattttttaaaacgtcagtaaccactgtggaatccgtttttacgaatgtaatctataaacttacgtagtaacgctaaatgagcgtgtttggaatatgttgccatacaaacaaaagtgcatttcggaaatcgtgtatgttattaatttgatgcttggacctgacacacagagccaattaattccatttgtattctatggggttcaggttcggggttatagaggcattgccactggtatcgcgtgtattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAAAG-----ATTT----A----GTGCA-ATAATTGAT-TTTTTT-AAATCGTTAGTTACCAGTGTGGTGTTTGT----TTT-----TAC-----GAATGCAGTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGTTATATGAACGTGTTTGGAATACGTTGCTATTGCAACAGAAGTGCTTTTTGGAGGTTGTTTAT-G----GTATTAATTTGATG-TTGGACCTGGCTCTCCGACCCAGTTCGTTCCATACGTGTTCTATGGGATTCAGGCTCTAGGATACAGAGGCATTGTCAC-T-GGTT-TTGCGTGTATTGCAAATAATGTCGTACCCATGACAATC-T-GGAAGCTTTGTGGCGCACTGTCTGAATCTGACCAGTGTATGGCCGACGGGCGCGAATTAGAACATGGTTTTGTCTCAAACGGTTTG-TGATCGTCTGTGC-ATGAACACAACAACACCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGTTGAGTCAACGAAGTAGCGCGATGAGTAC----GTAACGTTGTTGCAAGTA-----CGCGACCGGGTCT-GAAACGATCTCTGACATAT--CCAGCAGCATTGTACCAGTTTGCAAGAATAGAAATAGTCTATCTGGAACAGCCAAAATGACATGCAA--CGGTATTTACCAATGACTCGGCCCGGAGCAAACCAATAGCCTGATTTCTCTCAGTTTCAGAATGACTTGGCA---------------TTGTTT-TTTA----------AG---TTTTTTTTTATCTGTGCTTAGCAACAAATGATTACTTGTCGTTGTAAAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAAAGTGT---T------TTTTTTNNNNNNNNNNTAGGCATCGATCATACTTTGtcatt
gi|5 : taattttt-G-TT-TCGAGTGTATTGCAAATGACGTCGTGCCAATAACAGTCTC-G-AAGCTCTGTGATGCGCTGTTGGAATC-GA---GTGAATGGCCGACAAGCACGAATACGAACACGGTTTTGTTTCAAAAGGCTTA-TGGTGATATATGC-ATGAACACCGTGACGCCGAGGAGT-ACTG-GTTGCAGGTAATAAAACGATAACGTCGGTGAGGTAACCTTATAGCGCGATGCGTAC----ATAACGTTGATACACGTATTATACACGACCGG-TCG-GATACGATCTCTGACATAT--CCAGTAGTATTGTACCGCTTCGCAGGAATATAAATAGTCTGCTCGGAACAAACATAATGGCGTGCAA--CGGTATTTACCAATGACCCGACCCGGAGCATACAAATACCTTGATTTCTCTCTGTTTCTGAAAAACGTTACATCG----ATAAAAGTTTGTTT-TTT----TAAA--GAA---GTTTTTCTTGTCTGTGCCAAGCAACAAATGATTAATTGTCAGTGT-A------------------------------AAAAACTGGATCTTGCGCACGTGCAAAG---TAAAGAAAA----C---G------TTTTATGTGCTCGGAC---GCAT-GA--ATAGTTCGGAAA-TTTG---GAA-ATA-TAAATGCATAACGGGTATCCG-AATTAAATCCTGATAGCAATGTATAA-ACGTTTCCGAACATGTATGT----TAACAAAAGAAATATTAAAAC--ATAAAGTGTAAAGTTTcctctataatttgaaatattgacaactgctattgaccacgttaaacattttattaaatgttccagaataggttatatatttaaattaatgtaaa
gi|6 : AAAAATTAACATCGACTTC--AAAC---GT--TT---C-TCTTTT-G---CCGATAAAAGTTTATTTAGAGTTACAAA-A-AG--TGTTCATTGAAACTTTATCATCAGTGGTTAAATTAATGTATCTGTGCAATTTGCTGGAAA--GAA--TCATACATCGCATGAGTTTTT-TTTTCTTAACGATAAAATGAAGAAGATTCAAAATGAAAATTCCAGAAAAGTGAAAATTATCACGTAACATTTGAAAAAGACATACAGT----GCTG----AATGAGTGCA-ATAACTGAT-TTTTC--AAAACGTCAGTGACCAGTGTGGG-----C----TCA-----TAATTTACGAATGCATTCCTTA-TACGTCATTTCTCTG----TACACA---AAGTTGATTAAACGTATTTGGAATACGTTGCCATTCCAACATAAGTGCATTTCGAAGGTCGTTTAT-G----GTATCAATTTGACAATTTGACCTGACCCTCCAACCCAGTTCATTCCATACGTGATCTATGGGGTTCAGGCTCGGGGATACAGTGGCATTGtcattat
gi|7 : acactgaccccaaatgaaaatctaaaacaaacaATGAAAACTTTACAT-GACTTC--AAAATGTAT--CT---CTT---TT-G---CTG-TTAATGTtgaacatatttatatatgtgtcg
gi|7 : cttacccaaaTGTTAATGTTTCTGTGTAATTTACTGGGGA--AAA--TCAGAGCTCGCGTG----TTT-TTTTCTAAACAATTAAGTGAAGAAATGTCAGAATGAAAATTCTAGAAAAATGAAAATGATCACGTAAAATTTGAAA-------AAAAT----GCTGACTAA----GTGC--ATAAATTGT-TTTTTT-AACACGTCAGTATTTAGTGTGGT-----C----TCCGTTTTTAC-----GAATGCATTCCTGAATACGTCATCTCTATGAACTTACGAA---ATGCTGAATGAGCGTGTTTGTATTACGTTGCCATTCCAACAGAAGTGCGTTTGGGAGGGCGTTTAT-G----GTATC-------------GACATGACCCGCCGACCCAGTTCATTCCGTACGTATTCTAAAAGGTTCTGGCTTTGGGATACAACGACATTGCCAC-T-ttctgtgtaatttactggggaaaatcagagctcgcgtgtttttttctaaacaattaagtgaagaaatgtcagaatgaaaattctagaaaaatgaaaatgatcacgtaaaatttgaaaaaaatgctgactaagtgcataaattgtttttttaacacgtcagtatttagtgtggtctccgtttttacgaatgcattcctgaatacgtcatctctatgaacttacgaaatgctgaatgagcgtgtttgtattacgttgccattccaacagaagtgcgtttgggagggcgtttatggtatcgacatgacccgccgacccagttcattccgtacgtattctaaaaggttctggctttgggatacaacgacattgccact
gi|8 : cttacccaaaatgaaaactttacatgacttcaaaatgtatctcttttgcCTCGCGGATACAGAGG------------G-TT-TCCCGTGTGTTGCAAATGGCGTTGTGTCCATA-------C----AGCCCTGTGACGCGCTGTCGGAATCTGACCAGTGTATGGCCGACAAGCACGAACTGAAACAGGATTTTATCTCAAACGGTTTA-TTATCGCCTGTGC-ATGAACACCTTAACGTCAAGGAGT-ACTG-ATTGCATGTCA-GAAACGATTACGTAAGTGAGTCAACGTAATACCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACGGGATCT-GACA-----------A-AT--CCAGTTGTATTGTATCGCTTCGCAAGACTATGAAAAGTCTATCTGGAACAGCAAAAATGACATGCAA--CGGTCTATACCAATGGACAG-------GCATGCATAAAGCCTGAATTCTATCAGTTTCAGAAATACGTGAGATAGCTA---AAAAG-TTGTTT-TTT
gi|9 : TGCATACGTCATCTTTATGAGCTTACGTA---ACGTTGAATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCAATTAT-G----GTATCAATTGGATGTTTGGATCTGACCCTCCGACCTAAGTCATTTCGTAGGTGTTCTATGAGAGTCATGTTCCGGGT------GGTATTGCCAC-TTG-TT-TCATGTG-----------ACGTCGTGCCCATAACAGTC-C-GGAAGCTCTGTGGAGCACTATCGGAATCCGACAAGTGTATGACCGACGAGGACGAATTTGAACACGTTTTTGTCTCAAACGGGCTA-TAATCGTCTGTGC-GTGAACATCGTAACGAAAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTATGTAGGTGTGTCAACGTAATAGCGCGACG
Alignments
lowQualScore : 3333333333333 1 11111 1111111 1111111 1111 33333333333333333 666666666666666666666666666 1111 1 22222222 1111 11111 22 33333333 222222222222222222222 333333333333333 222222222222 33333
lowQualScore : 55 777 2222222222222 2 777 1 4 4 22222 2 2 3 4444444 0 11 2222222 9999 4 3 1 1 3 1 44444444444444444 4 5 55 999999999999999999999999999 4 77 888 0 5 0000 7 1 0 1 22 0 22 1 0 666 0 5 0 0 11 88888888 0 6 22 2 5 0 5 22 55 5 0 5 5 2222 44444 5 3 1 77 0 77 3 1 7777 22 5 1 1 33333333 0 5 5 444444444444444444444 888 777777777777777 888 5 66 11 444444444444 1 22222 0
lowQualScore : .. ... ............. . ... . . . ..... . . . ....... . .. ....... .... . . . . . . ................. . . .. ........................... . .. ... . . .... . . . . .. . .. . . ... . . . . .. ........ . . .. . . . . .. .. . . . . .... ..... . . . .. . .. . . .... .. . . . ........ . . . ..................... ... ............... ... . .. .. ............ . ..... .
lowQualScore : 55 000 0000000000000 0 000 9 4 4 66666 0 0 7 4444444 7 99 7777777 5555 0 9 2 4 0 1 00000000000000000 4 0 44 111111111111111111111111111 5 44 888 5 0 6666 6 0 2 1 99 9 00 4 2 444 0 0 2 1 66 66666666 2 2 11 8 0 2 0 00 99 0 1 0 0 1111 33333 7 0 4 99 1 99 7 0 7777 22 7 4 7 11111111 1 0 0 222222222222222222222 888 999999999999999 888 0 99 77 222222222222 0 88888 8
consensus : ATGAAAACTTTACATCGACTTC--AAAA---GT--CT---C-T---TT-G---CTGATAAATGTATATTCAGGGCTA-AAA-A-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTTCTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGT----GCTG----A----GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGN-----C----TCC-----TA------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTC-C-G-AAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTTG---GAG-A-A-AAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT--TATAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
Reference ( family-961 ) : ATGAAAACTTTACATCGACTTC--AAAA---GT--CT---C-T---TT-G---CTGATAAATGTATATTCAGGGCTA-AAA-A-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTTCTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGT----GCTG----A----GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGN-----C----TCC-----TA------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTC-C-G-AAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTTG---GAG-A-A-AAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT--TATAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
gi|1 : ATGAAAACTTTACATCGACTT-------------------------TT-G---TTGATGAATATATATTCAGGGCTT-AAA-A-AA--TTT-CATTGAAGCTTTAT-------GGCTATATAAATGTTTCTATGTAATATACTGGGAAC-AAA--TCAGATATTACATG----TTT-TTTTCTGATTAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTAACATTTGAAAAAAGCATAAAGT----GCTA----A----GTGCA-ATAACTGAT-TTTTTT-AAAACATCAGTAACCAGTGTGGA-----C----TCC-----T-------GAATGCATTCCTGAATACGTCATCCCTGTGAACTTATGTA---ACGCTAAA-----------GGAAGATGTTGCCATTCCAACAGAAGTGCATTTCAAAGATCTTGTAT-G----GTATTAATTTGATGTTTGGAACTGACTCACCGGTCCAATTAATTCCATATGTGTTCTATGGGGTTCATGCTCGGGGTTATAGAGGCATTGCCTC-T-GATT-TCACGTGTATTGCAAATGAAGTCGAGCCCAGAACAG----------CTCAGTGGTGCGCTGTCGAAATATGACCAGTGTATGGCTGACGAGCAGGAACTGGAACACGTTTTTATTTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGACATGCCAAGAAGT-A-TGTGTTGCAGGTAA-GAAACAATTACGTAGGTGAGTCAACGTAATATTGCGATGAGTAC----ATTACGTTGTTGCACGTA-----CGCAACCTGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCAGTTCGCAAGAATATAAAAAGTCTATCTGGAACAGTCAAAATGACGTACAA--CGGTATTTACCAATGACCTGACCCGGAGCATTCAAAGAGTCCGATTTCTCTCAGTTTCAGAAAAACGTGGCATCGCTAAATAAAAG--TGTTA-TTTAAAAGAAATTTAA---TTTTTTTTTATCTGTGCTAAGTAACAAGTGATTACTTGTCGGTGT-AAAACC-T---GTAG-----G--------TAAAAAAACGGATGTTGCGCACATGCAAAGTATTAAGGAAAA----C---C------TTTTTTGTGCACAGAC---GCAT-GA--ATACTTCTT--ATTTT-----------------------TTATTTTCCACAATTAAATTCTGATAGCCATGTATAACATGTTTTGGAATATGTATATTATATAACAAAGGAAATGTTCAAACATATAAAGTGTAAAGTTT
gi|10 : GAATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCGATTAT-G----GTATCAATTGGATGATTGGACCTGACCCTCCGGCCTAAGTCATTTCGTAGGTGTTATATGAGAGTCATGCTCCGGGT------GGCATTGCCACTT-G-TT-T------TAT-----GTGACGTCGTGCCCATAACAGTC-CGG-AAGCTCTGTGGAGCAATATCGTAATCCGACCAGTGTATGACCGACGAGGACGAATTTGAACACGGTTTTGTATCAAACGGGTTA-TTATCGTCTGTGC-ATGAACATCGTCACA-AAAGGAGT-ACTG-GTTACAGGTAA-GAAACCATTAGGTAGATGTGTCAACGTAATAGCGCGACGA
gi|11 : ATGAAAATTTTACGTCGATTTT--AAAA---GT--AT---C-G---TT-GTTTCTGTTAAATATATGTTCAGAG--------------TTTTCATCGAGGCTTTAT-------GGCTATATTAATGTTTCTGCGTGATTTACTGGAAA--AAAACCCAGACATCGCATGTTT-TTT-TTTTCTAAAAAA-TGATTGAAGAAGGGACAAAGTG
gi|11 : gaTTGAAGAAGGGACAAAGT----GCTG----ACTTAGTGCA-ATAACTGAT-TTTTTA-AAAACGTCATTAACCAATGTAGC-----C----TCG-----TATTTAC-GAATGCATTCCTGAATACGTAATCTCTATAGGCCAATATA---ACctgacttagtgcaataactgattttttaaaaacgtcattaaccaatgtagcctcgtatttacgaatgcattcctgaatacgtaatctctataggccaatataacatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|12 : gaatgaaaattttacgtcgattttaaaagtatcgttgtttctgttaaatatatgttcagagttttcatcgaggctttatggctatattaatgtttctgcgtgatttactggaaaaaaacccagacatcgcatgttttttttttctaaaaaatgaGCCCTGTGACGGAGTGTCAGAATCTGCCCAGTATATGGCCTAAGGGCACGAATAGGGATATATTGATGCCTGAGATGGTTTC-TAATAGTCTGACCTATG-ACCCCTAGTTGGTGAGCAGTCAC-A-GTTGCCGGCAA-AAACCGATTTCGGAGATGGTTCAACGTAATGACGCG----GTCCTCCTGTAAAGACGTTAGACGTT-----GGTGAGCGGGTCTCGA-ACAGTCACTGACAGAC--CC---AGTGTTG----AGTTTG-AAGACTATGAATTGTCTTTCGGGAGCACCCAAACTAGCGTACAAATCGCTATatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|13 : gAACTTTACATCGACTTC--AAAA---GT--TT---C-TCTTTT-G---CTGATAAATAAATATTCAAGGCTA-AAA-A-CG--TTTTCGTCGAAGCTTTAC-------GGCTATATTAATGTATCAGTGTAAAATATTGGGAA--AAAA-TCAGACACCGCATG----TT----------------AAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTA-------AAAAAGGCATAAAGT----GCTGACTAA----GTGCA-ATAACTGAT-TCTTTT-AAAACGTCAGTAGCCAGTGTGGA-----CAACATTT-----TAAC----GAATGCATTCCTGAAT
gi|14 : ATTAAAACTTTACATCGACTTC--AAAA---GTATCT---C-T---TTTG---TTGATAAATGTATATTCAGAGTTA-AAAAA-AA--TTTTCATTGAAGTTTTAT-------GGCTATATTAATGGTTCCGTGTAATTTACTGGGAA--AAA--TCAGACATTACATGT---TTT-TTTTCTAAACAATTAAGT---GAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGGTCATGTAACATTTGAAAAAGACATGAAGTATTGACTG----A----GTTCA-ATAACTG
gi|15 : gacccaaaATGAAAACTTTACATTGACTTCAAAAAA---AT--ATATAT-T---TT-A---TTGATATTTGTATATTCATAGCTG-GGG-GTTT--TTTTTATCGAAGTTTTAA-------TGCTATATCAATGTTT-TGTGCACTTAACTGGGAAATAAA--CTACACATTTCATG----TTTATTTTTTTAACAATTAATTGAGGA------GAAATGGAAATTCAAGAGAAAACAAATTGATCACACAACATTAAAAAAAGACA
gi|16 : cctaaaAAATGAA--TGAAGGTTTTTTTTTATCT-----AAGC---GAA-----GCTTGTCAATGT-AAAACC-T---GAAAAAAAAG--------TGAAAAACCAGTTATTTTGCATTTGGAATG---TAAGGAAAA----C---TGTGTTTTTTTTTGTGCTCGGGT---GAAT-GA--ATACT---GAAATGTTGA--GAG-A-A-AAAATGCATAATGATTATCCGCAATTAAATCCCGATTGCCATATATACCACGTTTCAGAACATGCATattacaatcctcattgcggtgca
gi|17 : ttATGAAAACTTTACATCGACATC--AAAT---GTGTCT---C-T---TTTG---CTAAAAAATATATATTCAGGGCTA-AAA-A-AA--T-------GAAGCTTTAT-------GGCTATATTAATGTTTCT---------------------------GACATCGCATG-----TT-TTTTCTGATCAATTAAATGAAGGAGGGTCAAAATGAAAATTCAAGAACAATGAAAATGATCATGTAACAT
gi|18 : ctgacccaaaaTTT-TTTAAAACAAA--TTA---TTTT----TATCTGTGCTACGTAACGAATGATTACCTGTCGATAT-AAAGCC-T----TAA-----GAAAAAAGAGAAAAAAACGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C-----------ATTTTGTGCTCGGGC---GTAT-GA--ATACTTCGGAAATTTTGAGAAAA-A-A-AAAATGCATAATGATTATCCGCA
gi|19 : ATGAAAACTTTACAACGACTTC--AAAA---GTGTCT---C-T---TTTG---CTGGCAAATGTATATTCAGAGGTA-AAA-A-AAAGTTTTCATCGAAACTTTTT-------GGCTATATCAATGTTTCTATGTAATGTATTGGAAA--ACC--TCAGACATCGCATG----TTT-TGTTTTAAACAATTGAGTGAAGAA
gi|2 : ctaaaaATGAAACTTTTACATCGATTTC--AAAG---GT--GT---C-TC--TT-G---CTGATAAATATATATCCATGGCTA-ATA-A-AT--TATATAT-GAAACTTTAT-------GGTTATATTATTGTTTCCTAGTAATT-----------------CAGACGTCGCATG----TTT-TTTTCTGATCAATTAAGTGAAGAAGGATCAAAATGAAAAT-----------------GATCATGTAACATTTGAAAAATACAGAAA--------------------TACATAAAACTAAT-TTTTTTTAAAACATCAATAACCAGTGTGGA-----C----TTC-------------------ATTCCTGAAAACGTGAACT--GTG----TACTTA---ACGCTAAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTTCATTTCAGAGATCGTGTATTGTATTGTATTAATTTGATGTTTGGAACTGACCCACTGATCCAGTTCATTTCATACGTGTTCTTTGGGGTTCAGGCTTGGGGTTATATAGGCATTG-------G-TT-TCGCGTGTATTGCAAATGACGT---GCCCAT--------T-G-CAGCTCGTTGGCGCGCTTTCAAAATCTCACCAGTGTATGACAGACGAGCACGAATAGAAACAC--------CT------GTTTAATGATAGTCTGTGC-ATGAATACCGACACACGAAGGAGT-ACGT-GTTGCAGGTAA-TAAACGATCAGGTAGGTGAGTCTACGTAATAGCGCAATGAGTAC----TTAACGTTGTTGTACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTATCGGTTCGCAAGAATATAAATAATCTATATTGAGCAGCCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGTCCGGATTATACAAAGAGCCTGATTT-TCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG--TGTTTCTTTAAAACAAA---------TTTTTTTTATCCGTGCTAAGCCACGAATGCTTACTTGTTGGTAT-AAAATC-T---GTAA-----G--------TGAATAACCGGATGTTGCGCAAGTGCAAAG---TAAGGAAAA----CGTTT------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGTAAATTTTG---GAG-A-ACGAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT--TA-AA-AAAAGAAATATTTAAACATATAAAGTGGAAAGTTT
gi|20 : acgcaaaTTTATCTGTGGTAAGCAACAAATGATTACTTGTCAGTGT-AAAACCATAAAGTAT-----G--------TAAAATACCAGATGTGGTGCTTGTGCAAAG---TAAGGAAAA----C---A------TGTTCTGTACTAGGAT---GCAT-GA--Atcattttg
gi|21 : aGTTTCCGACCATGTATGT--TA--ACCAAAGAAAAATCCAAACATATAAAGTGTTAAGTTT
gi|3 : CATAAAGTCCTGGCTA----A----GTGCA-ATAACTGATATTTTTT-AAAACGTCAGTAACCACTGTGGA-----A----TCC-----------------GTTTTTACGAAT--GTAATCT--ATAAACTTACGTAGTAACGCTAAATGAGCGTGTTTGGAATATGTTGCCATACAAACAAAAGTGCATTTCGGAAATCGTGTAT-G----TTATTAATTTGATGCTTGGACCTGACACACAGAGCCAATTAATTCCATTTGTATTCTATGGGGTTCAGGTTCGGGGTTATAGAGGCATTGCCAC-T-G-GTATCGCGTGTATTGtcgt
gi|3 : aAAAAACGCAATGAGTAC----GTAACGTTGTTACACGAA-----CGTAACCGGGTCT-GACGTGAGCTCTGATATATATCTGGTAGTATTGTACCGGTTTGCTAGAATATAAATAGTCTATCTGGAATAGGCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGTGCCTGATTCCTCTCAGTTTCAGAAAGGCGTGGCATCGCTAAATAAAAG--TGTTT-TTTAAAACAAATTTAAT--TTTTTTTTTATCTGTGCTAAGCAACGAACGATTACTAGTCGGTGT-AAAACC-T---ATAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAACGAAAA----CGT-T------TTTTTTGTGCTCGGAC---GCAT-GA--ATTCTTCTTAAATGTTG---AAGAA-A-AAAATGGAAAATGATTATCCGCAATTACATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT----TAACAAAAGAAATATTCAAACATATGAAGTGTGAAGTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaacgcaatgagtacgtaacgttgttacacgaacgtaaccgggtctgacgtgagctctgatatatatctggtagtattgtaccggtttgctagaatataaatagtctatctggaataggcaaaatgacgtacaacggtatttaccaatgacccggcccggagcatacaaagtgcctgattcctctcagtttcagaaaggcgtggcatcgctaaataaaagtgttttttaaaacaaatttaattttttttttatctgtgctaagcaacgaacgattactagtcggtgtaaaacctataagtgaaaaaccggatgttgcgcacgtgcaaagtaacgaaaacgttttttttgtgctcggacgcatgaattcttcttaaatgttgaagaaaaaaatggaaaatgattatccgcaattacattctgatagccatgtataacacgttttggaatatgtatgttaacaaaagaaatattcaaacatatgaagtgtgaagttttcatt
gi|4 : acataaagtcctggctaagtgcaataactgatattttttaaaacgtcagtaaccactgtggaatccgtttttacgaatgtaatctataaacttacgtagtaacgctaaatgagcgtgtttggaatatgttgccatacaaacaaaagtgcatttcggaaatcgtgtatgttattaatttgatgcttggacctgacacacagagccaattaattccatttgtattctatggggttcaggttcggggttatagaggcattgccactggtatcgcgtgtattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAAAG-----ATTT----A----GTGCA-ATAATTGAT-TTTTTT-AAATCGTTAGTTACCAGTGTGGTGTTTGT----TTT-----TAC-----GAATGCAGTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGTTATATGAACGTGTTTGGAATACGTTGCTATTGCAACAGAAGTGCTTTTTGGAGGTTGTTTAT-G----GTATTAATTTGATG-TTGGACCTGGCTCTCCGACCCAGTTCGTTCCATACGTGTTCTATGGGATTCAGGCTCTAGGATACAGAGGCATTGTCAC-T-GGTT-TTGCGTGTATTGCAAATAATGTCGTACCCATGACAATC-T-GGAAGCTTTGTGGCGCACTGTCTGAATCTGACCAGTGTATGGCCGACGGGCGCGAATTAGAACATGGTTTTGTCTCAAACGGTTTG-TGATCGTCTGTGC-ATGAACACAACAACACCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGTTGAGTCAACGAAGTAGCGCGATGAGTAC----GTAACGTTGTTGCAAGTA-----CGCGACCGGGTCT-GAAACGATCTCTGACATAT--CCAGCAGCATTGTACCAGTTTGCAAGAATAGAAATAGTCTATCTGGAACAGCCAAAATGACATGCAA--CGGTATTTACCAATGACTCGGCCCGGAGCAAACCAATAGCCTGATTTCTCTCAGTTTCAGAATGACTTGGCA---------------TTGTTT-TTTA----------AG---TTTTTTTTTATCTGTGCTTAGCAACAAATGATTACTTGTCGTTGTAAAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAAAGTGT---T------TTTTTTNNNNNNNNNNTAGGCATCGATCATACTTTGtcatt
gi|5 : taattttt-G-TT-TCGAGTGTATTGCAAATGACGTCGTGCCAATAACAGTCTC-G-AAGCTCTGTGATGCGCTGTTGGAATC-GA---GTGAATGGCCGACAAGCACGAATACGAACACGGTTTTGTTTCAAAAGGCTTA-TGGTGATATATGC-ATGAACACCGTGACGCCGAGGAGT-ACTG-GTTGCAGGTAATAAAACGATAACGTCGGTGAGGTAACCTTATAGCGCGATGCGTAC----ATAACGTTGATACACGTATTATACACGACCGG-TCG-GATACGATCTCTGACATAT--CCAGTAGTATTGTACCGCTTCGCAGGAATATAAATAGTCTGCTCGGAACAAACATAATGGCGTGCAA--CGGTATTTACCAATGACCCGACCCGGAGCATACAAATACCTTGATTTCTCTCTGTTTCTGAAAAACGTTACATCG----ATAAAAGTTTGTTT-TTT----TAAA--GAA---GTTTTTCTTGTCTGTGCCAAGCAACAAATGATTAATTGTCAGTGT-A------------------------------AAAAACTGGATCTTGCGCACGTGCAAAG---TAAAGAAAA----C---G------TTTTATGTGCTCGGAC---GCAT-GA--ATAGTTCGGAAA-TTTG---GAA-ATA-TAAATGCATAACGGGTATCCG-AATTAAATCCTGATAGCAATGTATAA-ACGTTTCCGAACATGTATGT----TAACAAAAGAAATATTAAAAC--ATAAAGTGTAAAGTTTcctctataatttgaaatattgacaactgctattgaccacgttaaacattttattaaatgttccagaataggttatatatttaaattaatgtaaa
gi|6 : AAAAATTAACATCGACTTC--AAAC---GT--TT---C-TCTTTT-G---CCGATAAAAGTTTATTTAGAGTTACAAA-A-AG--TGTTCATTGAAACTTTATCATCAGTGGTTAAATTAATGTATCTGTGCAATTTGCTGGAAA--GAA--TCATACATCGCATGAGTTTTT-TTTTCTTAACGATAAAATGAAGAAGATTCAAAATGAAAATTCCAGAAAAGTGAAAATTATCACGTAACATTTGAAAAAGACATACAGT----GCTG----AATGAGTGCA-ATAACTGAT-TTTTC--AAAACGTCAGTGACCAGTGTGGG-----C----TCA-----TAATTTACGAATGCATTCCTTA-TACGTCATTTCTCTG----TACACA---AAGTTGATTAAACGTATTTGGAATACGTTGCCATTCCAACATAAGTGCATTTCGAAGGTCGTTTAT-G----GTATCAATTTGACAATTTGACCTGACCCTCCAACCCAGTTCATTCCATACGTGATCTATGGGGTTCAGGCTCGGGGATACAGTGGCATTGtcattat
gi|7 : acactgaccccaaatgaaaatctaaaacaaacaATGAAAACTTTACAT-GACTTC--AAAATGTAT--CT---CTT---TT-G---CTG-TTAATGTtgaacatatttatatatgtgtcg
gi|7 : cttacccaaaTGTTAATGTTTCTGTGTAATTTACTGGGGA--AAA--TCAGAGCTCGCGTG----TTT-TTTTCTAAACAATTAAGTGAAGAAATGTCAGAATGAAAATTCTAGAAAAATGAAAATGATCACGTAAAATTTGAAA-------AAAAT----GCTGACTAA----GTGC--ATAAATTGT-TTTTTT-AACACGTCAGTATTTAGTGTGGT-----C----TCCGTTTTTAC-----GAATGCATTCCTGAATACGTCATCTCTATGAACTTACGAA---ATGCTGAATGAGCGTGTTTGTATTACGTTGCCATTCCAACAGAAGTGCGTTTGGGAGGGCGTTTAT-G----GTATC-------------GACATGACCCGCCGACCCAGTTCATTCCGTACGTATTCTAAAAGGTTCTGGCTTTGGGATACAACGACATTGCCAC-T-ttctgtgtaatttactggggaaaatcagagctcgcgtgtttttttctaaacaattaagtgaagaaatgtcagaatgaaaattctagaaaaatgaaaatgatcacgtaaaatttgaaaaaaatgctgactaagtgcataaattgtttttttaacacgtcagtatttagtgtggtctccgtttttacgaatgcattcctgaatacgtcatctctatgaacttacgaaatgctgaatgagcgtgtttgtattacgttgccattccaacagaagtgcgtttgggagggcgtttatggtatcgacatgacccgccgacccagttcattccgtacgtattctaaaaggttctggctttgggatacaacgacattgccact
gi|8 : cttacccaaaatgaaaactttacatgacttcaaaatgtatctcttttgcCTCGCGGATACAGAGG------------G-TT-TCCCGTGTGTTGCAAATGGCGTTGTGTCCATA-------C----AGCCCTGTGACGCGCTGTCGGAATCTGACCAGTGTATGGCCGACAAGCACGAACTGAAACAGGATTTTATCTCAAACGGTTTA-TTATCGCCTGTGC-ATGAACACCTTAACGTCAAGGAGT-ACTG-ATTGCATGTCA-GAAACGATTACGTAAGTGAGTCAACGTAATACCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACGGGATCT-GACA-----------A-AT--CCAGTTGTATTGTATCGCTTCGCAAGACTATGAAAAGTCTATCTGGAACAGCAAAAATGACATGCAA--CGGTCTATACCAATGGACAG-------GCATGCATAAAGCCTGAATTCTATCAGTTTCAGAAATACGTGAGATAGCTA---AAAAG-TTGTTT-TTT
gi|9 : TGCATACGTCATCTTTATGAGCTTACGTA---ACGTTGAATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCAATTAT-G----GTATCAATTGGATGTTTGGATCTGACCCTCCGACCTAAGTCATTTCGTAGGTGTTCTATGAGAGTCATGTTCCGGGT------GGTATTGCCAC-TTG-TT-TCATGTG-----------ACGTCGTGCCCATAACAGTC-C-GGAAGCTCTGTGGAGCACTATCGGAATCCGACAAGTGTATGACCGACGAGGACGAATTTGAACACGTTTTTGTCTCAAACGGGCTA-TAATCGTCTGTGC-GTGAACATCGTAACGAAAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTATGTAGGTGTGTCAACGTAATAGCGCGACG
blockSeqs : AA TGT TTCTCTT T TTT C C A AAAG T T C CATCAGT TT AAAAC AGTT A A A C C G GCTGACTTA T A TT ACAACATTTTAAC C GG GTA T TATT A T C TT TA C TT G A AA TCCGGA C TT G A T TC GT C . T TCCT TTATA C C G AT AT G G CTAA TT C A T TGAAGG A A TAAGAAAAAAGA . CTGTGTTT TAG C TC GG AGAAAAAAA A TA
blockSeqs : . . ATATATT T . T . . TTT T T C . AT ATAAA TTT . A A C A G GCTGACTAA . . A TGTTTGTTTTTAC C AA . . . T A G TT GA C TT . . GA TCTGGA T AG T . . AG CG . . . . . . C T . . G G CTAA T . A C TTTAAT . . GAAAAAAAAG . AGTGTT . . . GT AGAGAAA G TA
blockSeqs : . . TTCTCTT T . C . . CG T T T . TT AAAA T . T A A A A ATTGACTGA . . T GCTCATAATTTAC C AG . . . C A G AT GA T T . . AA TCTCGA T AG G . . AC CC . . . . . . A T . . G T CTA T . A C TTA . . AAAGTATG . CGTTT . . . TT GAGAACG C T
blockSeqs : . . ATCTCT . . C . . AA T T C . TA AAA . . G T A C A CCTGGCTAA . . T TCTCCGTTTTTAC C AA . . . A T T AT GT C T . . AA TCCGGA T TA G . . CA CC . . . . . . T T . . A T . . . A C GAA . . GTAAG . CGTT . . . GG AAGAAAA G T
blockSeqs : . . GTCTCT . . G . . AA T T C . GT ACC . . A A C A A GCTGAATGA . . T CCTCGTATTTAC T AG . . . T T G AT AC C T . . A TGC T AC A . . TG TC . . . . . . C T . . . A . . . . T AG . . ATAAG . CA . . . G GAAATAT C
blockSeqs : . . GTCTCT . . C . . AT A A T . TT GAA . . G T T A A GCTGACTAA . . T ACTTC . . . . . . G T AT GA . . . . . C C TG T . . TA AA . . . . . . . . . . . . . . . . GTAAG . CG . . .
blockSeqs : . . GTCTC . . T . . AG G T . . TT AAA . . T A . . . ATTTA . . . AATCC . . . . . . T G T . . . . . . TT . . . TA A . . . . . . . C . . .
blockSeqs : . . CTCTT . . . . . . . . . . T . . . A A . . C T .
blockSeqs : . . ATCG . . . . . . . .
blockSeqCons : NTCTCT******* AAA**** GCTGACTAA******** NCTCCGTTTTTAC************** TCCGGA** T* TAA***** *** GAGAAAA***** T****
originalCons : ATGAAAACTTTACATCGACTTC--AAAA---GT--CT---C-T---TT-G---CTGATAAATGTATATTCAGGGCTA-AAA-A-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTTCTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGT----GCTG----A----GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGN-----C----TCC-----TA------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTC-C-G-AAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTTG---GAG-A-A-AAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT--TATAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
finalCons : ATGAAAACTTTACATCGACTTC--AAAA---GTNTCTCT-------TT-G---CTGATAAATGTATATTCAGGGCTA-AAA-A-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAAAAA----TCAGACATCGCATG----TTT-TTTTCTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGTGCTGACTAA--------GTGCA-ATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGNCTCCGTTTTTAC--------------GAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCAC-T-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTCCGGA--AGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTTA-TGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAGT-TGTTT-TTTAAAACAAATAA-----TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTTGGAGAAAA-----AAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGTT----AACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
Alignments
lowQualScore : 2 11111 1111111 1111111 1111 111 1111 1 11111111 1111 11111 22 33333333 222222222222222222222 333333333333333 1111 1111
lowQualScore : 55 4 2 4 4 4 0 1 4 77777 2 2 3 4444444 0 11 2222222 5555 4 4 3 1 1 3 22 2 0 5 55 1 3 111 0 0 4 77 888 0 5 0000 7 1 0 1 22 0 22 1 0 8 0 5 0 0 3 0 88888888 0 6 22 2 5 0 5 22 55 5 0 5 5 2222 44444 5 3 1 77 0 77 3 1 7777 22 5 1 1 33333333 0 5 5 444444444444444444444 888 777777777777777 888 5 66 11 4444 55 1 7777 0
lowQualScore : .. . . . . . . . . ..... . . . ....... . .. ....... .... . . . . . . .. . . . .. . . ... . . . .. ... . . .... . . . . .. . .. . . . . . . . . . ........ . . .. . . . . .. .. . . . . .... ..... . . . .. . .. . . .... .. . . . ........ . . . ..................... ... ............... ... . .. .. .... .. . .... .
lowQualScore : 55 0 4 0 0 0 0 9 4 00000 0 0 7 4444444 7 99 7777777 5555 0 0 9 2 4 0 55 9 1 0 44 0 4 444 2 1 5 44 888 5 0 6666 6 0 2 1 99 9 00 4 2 9 0 0 2 1 0 1 00000000 2 2 11 8 0 2 0 00 99 0 1 0 0 1111 33333 7 0 4 99 1 99 7 0 7777 22 7 4 7 11111111 1 0 0 222222222222222222222 888 999999999999999 888 0 99 77 2222 00 0 0000 8
consensus : ATGAAAACTTTACATCGACTTC--AAAA-GTGTCT-C-T-TTTGCTGATAAATGTATATTCAGGGCTA-AAAA-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTT-CTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGTGCTGACTAAGTGCAATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGNCTCCGTTTTTACGAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCACT-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTCCGGAAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTT-ATGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTT--G-GAGAAAAAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT----TAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
Reference ( family-961 ) : ATGAAAACTTTACATCGACTTC--AAAA-GTNTCT-C-T-TT-GCTGATAAATGTATATTCAGGGCTA-AAAA-AA--TTTTCATCGAAGCTTTAT-------GGCTATATTAATGTTTCTGTGTAATTTACTGGGAA--AAA--TCAGACATCGCATG----TTT-TTTT-CTGAACAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAAAAATGAAAATGATCACGTAACATTTGAAAAAGGCATAAAGTGCTGACTAAGTGCAATAACTGAT-TTTTTT-AAAACGTCAGTAACCAGTGTGGNCTCCGTTTTTACGAATGCATTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGCTGAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTGCATTTCGGAGGTCGTTTAT-G----GTATCAATTTGATGNTTGGACCTGACCCNCCGACCCAGTTCATTCCGTACGTGTTCTATGGGGTTCAGGCTCGGGGNTACAGAGGCATTGCCACT-G-TT-TCGCGTGTATTGCAAATGACGTCGTGCCCATAACAGTCCGGAAGCTCTGTGGCGCGCTGTCGGAATCCGACCAGTGTATGGCCGACGAGCACGAATTGGAACACGNTTTTGTCTCAAACGGTTT-ATGATCGTCTGTGC-ATGAACACCGNNACGCCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGGTGAGTCAACGTAATAGCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCGGTTCGCAAGAATATAAATAGTCTATCTGGAACAGCCAAAATGACGTGCAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGAGCCTGATTTCTCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG-TTGTTT-TTTAAAACAAA--TAA---TTTTTTTTTATCTGTGCTAAGCAACGAATGATTACTTGTCGGTGT-AAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C---T------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGNAAATTTT--G-GAGAAAAAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTCGGAACATGTATGT----TAACAAAAGAAATATTCAAACATATAAAGTGTAAAGTTT
gi|1 : ATGAAAACTTTACATCGACTT-------------------TT-GTTGATGAATATATATTCAGGGCTT-AAAA-AA--TTT-CATTGAAGCTTTAT-------GGCTATATAAATGTTTCTATGTAATATACTGGGAAC-AAA--TCAGATATTACATG----TTT-TTTT-CTGATTAATTAAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTAACATTTGAAAAAAGCATAAAGTGCT----AAGTGCAATAACTGAT-TTTTTT-AAAACATCAGTAACCAGTGTGGACTCC-------TGAATGCATTCCTGAATACGTCATCCCTGTGAACTTATGTA---ACGCTAAA-----------GGAAGATGTTGCCATTCCAACAGAAGTGCATTTCAAAGATCTTGTAT-G----GTATTAATTTGATGTTTGGAACTGACTCACCGGTCCAATTAATTCCATATGTGTTCTATGGGGTTCATGCTCGGGGTTATAGAGGCATTGCCTCT-GATT-TCACGTGTATTGCAAATGAAGTCGAGCCCAGAACAG--------CTCAGTGGTGCGCTGTCGAAATATGACCAGTGTATGGCTGACGAGCAGGAACTGGAACACGTTTTTATTTCAAACGGTTT-ATGATCGTCTGTGC-ATGAACACCGACATGCCAAGAAGT-A-TGTGTTGCAGGTAA-GAAACAATTACGTAGGTGAGTCAACGTAATATTGCGATGAGTAC----ATTACGTTGTTGCACGTA-----CGCAACCTGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTACCAGTTCGCAAGAATATAAAAAGTCTATCTGGAACAGTCAAAATGACGTACAA--CGGTATTTACCAATGACCTGACCCGGAGCATTCAAAGAGTCCGATTTCTCTCAGTTTCAGAAAAACGTGGCATCGCTAAATAAAAG--TGTTA-TTTAAAAGAAATTTAA---TTTTTTTTTATCTGTGCTAAGTAACAAGTGATTACTTGTCGGTGT-AAAACC-T---GTAG-----G--------TAAAAAAACGGATGTTGCGCACATGCAAAGTATTAAGGAAAA----C---C------TTTTTTGTGCACAGAC---GCAT-GA--ATACTTCTT--ATTTT---------------------TTATTTTCCACAATTAAATTCTGATAGCCATGTATAACATGTTTTGGAATATGTATATTATATAACAAAGGAAATGTTCAAACATATAAAGTGTAAAGTTT
gi|10 : GAATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCGATTAT-G----GTATCAATTGGATGATTGGACCTGACCCTCCGGCCTAAGTCATTTCGTAGGTGTTATATGAGAGTCATGCTCCGGGT------GGCATTGCCACTTG-TT-T------TAT-----GTGACGTCGTGCCCATAACAGTCCGGAAGCTCTGTGGAGCAATATCGTAATCCGACCAGTGTATGACCGACGAGGACGAATTTGAACACGGTTTTGTATCAAACGGGTT-ATTATCGTCTGTGC-ATGAACATCGTCACA-AAAGGAGT-ACTG-GTTACAGGTAA-GAAACCATTAGGTAGATGTGTCAACGTAATAGCGCGACGA
gi|11 : ATGAAAATTTTACGTCGATTTT--AAAA-GTATCG-T-TGTT-TCTGTTAAATATATGTTCAGAG-------------TTTTCATCGAGGCTTTAT-------GGCTATATTAATGTTTCTGCGTGATTTACTGGAAA--AAAACCCAGACATCGCATGTTT-TTT-TTTT-CTAAAAAA-TGATTGAAGAAGGGACAAAGTG
gi|11 : gaTTGAAGAAGGGACAAAGTGCTGACTTAGTGCAATAACTGAT-TTTTTA-AAAACGTCATTAACCAATGTAGCCT-CGTATTTACGAATGCATTCCTGAATACGTAATCTCTATAGGCCAATATA---ACctgacttagtgcaataactgattttttaaaaacgtcattaaccaatgtagcctcgtatttacgaatgcattcctgaatacgtaatctctataggccaatataacatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|12 : gaatgaaaattttacgtcgattttaaaagtatcgttgtttctgttaaatatatgttcagagttttcatcgaggctttatggctatattaatgtttctgcgtgatttactggaaaaaaacccagacatcgcatgttttttttttctaaaaaatgaGCCCTGTGACGGAGTGTCAGAATCTGCCCAGTATATGGCCTAAGGGCACGAATAGGGATATATTGATGCCTGAGATGGTTT-CTAATAGTCTGACCTATG-ACCCCTAGTTGGTGAGCAGTCAC-A-GTTGCCGGCAA-AAACCGATTTCGGAGATGGTTCAACGTAATGACGCG----GTCCTCCTGTAAAGACGTTAGACGTT-----GGTGAGCGGGTCTCGA-ACAGTCACTGACAGAC--CC---AGTGTTG----AGTTTG-AAGACTATGAATTGTCTTTCGGGAGCACCCAAACTAGCGTACAAATCGCTATatctattttacaacttgtcaagaacgtgtatttataaataaatggtagttggttaatttaata
gi|13 : gAACTTTACATCGACTTC--AAAA-GTTTCT-C-T-TTTGCTGATAAATAAATATTCAAGGCTA-AAAA-CG--TTTTCGTCGAAGCTTTAC-------GGCTATATTAATGTATCAGTGTAAAATATTGGGAA--AAAA-TCAGACACCGCATG----TT-----------------AAGTGAAGAAGGGTCAAAATGAAAATTCCAGAACAATGAAAATGATCATGTAA-------AAAAGGCATAAAGTGCTGACTAAGTGCAATAACTGAT-TCTTTT-AAAACGTCAGTAGCCAGTGTGGACAACATTTTAACGAATGCATTCCTGAAT
gi|14 : ATTAAAACTTTACATCGACTTC--AAAA-GTATCT-C-T-TTTGTTGATAAATGTATATTCAGAGTTA-AAAA-AAA-TTTTCATTGAAGTTTTAT-------GGCTATATTAATGGTTCCGTGTAATTTACTGGGAA--AAA--TCAGACATTACATG----TTT-TTTTTCTAAACAATTAAGTGAAG---GGTCAAAATGAAAATTCCAGAAAAATGAAAATGGTCATGTAACATTTGAAAAAGACATGAAGTATTGACTGAGTTCAATAACTG
gi|15 : gacccaaaATGAAAACTTTACATTGACTTCAAAAAA-ATATATAT-T-TT-ATTGATATTTGTATATTCATAGCTG-GGGGTTT--TTTTTATCGAAGTTTTAA-------TGCTATATCAATGTTT-TGTGCACTTAACTGGGAAATAAA--CTACACATTTCATG----TTTATTTT-TTTAACAATTAATTGAGGA------GAAATGGAAATTCAAGAGAAAACAAATTGATCACACAACATTAAAAAAAGACA
gi|16 : cctaaaAAATGAA--TGAAGGTTTTTTTTTATCT-----AAGC---GAA-----GCTTGTCAATGT-AAAACC-T---GAAAAAAAAG--------TGAAAAACCAGTTATTTTGCATTTGGAATG---TAAGGAAAA----C---TGTGTTTTTTTTTGTGCTCGGGT---GAAT-GA--ATACT---GAAATGTT--GAGAGAAAA-AATGCATAATGATTATCCGCAATTAAATCCCGATTGCCATATATACCACGTTTCAGAACATGCATattacaatcctcattgcggtgca
gi|17 : ttATGAAAACTTTACATCGACATC--AAAT-GTGTCT-C-T-TTTGCTAAAAAATATATATTCAGGGCTA-AAAA-AA--T-------GAAGCTTTAT-------GGCTATATTAATGTTTCT---------------------------GACATCGCATG-----TT-TTTT-CTGATCAATTAAATGAAGGAGGGTCAAAATGAAAATTCAAGAACAATGAAAATGATCATGTAACAT
gi|18 : ctgacccaaaaTTT-TTTAAAACAAA--TTA---TTTTT----ATCTGTGCTACGTAACGAATGATTACCTGTCGATAT-AAAGCC-T----TAA-----GAAAAAAGAGAAAAAAACGGATGTTGCGCACGTGCAAAG---TAAGGAAAA----C-----------ATTTTGTGCTCGGGC---GTAT-GA--ATACTTCGGAAATTTTGAG-AAAAAAAAAATGCATAATGATTATCCGCA
gi|19 : ATGAAAACTTTACAACGACTTC--AAAA-GTGTCT-C-T-TTTGCTGGCAAATGTATATTCAGAGGTA-AAAA-AAAGTTTTCATCGAAACTTTTT-------GGCTATATCAATGTTTCTATGTAATGTATTGGAAA--ACC--TCAGACATCGCATG----TTT-TGTT-TTAAACAATTGAGTGAAGAA
gi|2 : ctaaaaATGAAACTTTTACATCGATTTC--AAAG-GTGTCT-C-T-T--GCTGATAAATATATATCCATGGCTA-ATAA-AT--TATATAT-GAAACTTTAT-------GGTTATATTATTGTTTCCTAGTAATT-----------------CAGACGTCGCATG----TTT-TTTT-CTGATCAATTAAGTGAAGAAGGATCAAAATGAAAAT-----------------GATCATGTAACATTTGAAAAATACAGAAA-TAC--A-TAA-------AACTAAT-TTTTTTTAAAACATCAATAACCAGTGTGGACTTC--------------ATTCCTGAAAACGTGAACT--GTG----TACTTA---ACGCTAAATGAGCGTGTTTGGAATACGTTGCCATTCCAACAGAAGTTCATTTCAGAGATCGTGTATTGTATTGTATTAATTTGATGTTTGGAACTGACCCACTGATCCAGTTCATTTCATACGTGTTCTTTGGGGTTCAGGCTTGGGGTTATATAGGCATTG------G-TT-TCGCGTGTATTGCAAATGA---CGTGCCCATTGC--------AGCTCGTTGGCGCGCTTTCAAAATCTCACCAGTGTATGACAGACGAGCACGAATAGAAACAC--------CT------GTTTAATGATAGTCTGTGC-ATGAATACCGACACACGAAGGAGT-ACGT-GTTGCAGGTAA-TAAACGATCAGGTAGGTGAGTCTACGTAATAGCGCAATGAGTAC----TTAACGTTGTTGTACGTA-----CGCGACCGGGTCT-GACACGATCTCTGACATAT--CCAGTAGTATTGTATCGGTTCGCAAGAATATAAATAATCTATATTGAGCAGCCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGTCCGGATTATACAAAGAGCCTGATTT-TCTCAGTTTCAGAAAGACGTGGCATCGCTAAATAAAAG--TGTTTCTTTAAAACAAA---------TTTTTTTTATCCGTGCTAAGCCACGAATGCTTACTTGTTGGTAT-AAAATC-T---GTAA-----G--------TGAATAACCGGATGTTGCGCAAGTGCAAAG---TAAGGAAAA----CGTTT------TTTTTTGTGCTCGGAC---GCAT-GA--ATACTTCGTAAATTTT--G-GAGAACGAAATGCATAATGATTATCCGCAATTAAATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT----TAAAAAAAGAAATATTTAAACATATAAAGTGGAAAGTTT
gi|20 : acgcaaaTTTATCTGTGGTAAGCAACAAATGATTACTTGTCAGTGT-AAAACCATAAAGTAT-----G--------TAAAATACCAGATGTGGTGCTTGTGCAAAG---TAAGGAAAA----C---A------TGTTCTGTACTAGGAT---GCAT-GA--Atcattttg
gi|21 : aGTTTCCGACCATGTATGT----TAACCAAAGAAAAATCCAAACATATAAAGTGTTAAGTTT
gi|3 : CATAAAGTCCTGGCTAAGTGCAATAACTGATATTTTTT-AAAACGTCAGTAACCACTGTGGAATCCGTTTTTACGAATGTA--------------ATCT--ATAAACTTACGTAGTAACGCTAAATGAGCGTGTTTGGAATATGTTGCCATACAAACAAAAGTGCATTTCGGAAATCGTGTAT-G----TTATTAATTTGATGCTTGGACCTGACACACAGAGCCAATTAATTCCATTTGTATTCTATGGGGTTCAGGTTCGGGGTTATAGAGGCATTGCCACT-G-GTATCGCGTGTATTGtcgt
gi|3 : aAAAAACGCAATGAGTAC----GTAACGTTGTTACACGAA-----CGTAACCGGGTCT-GACGTGAGCTCTGATATATATCTGGTAGTATTGTACCGGTTTGCTAGAATATAAATAGTCTATCTGGAATAGGCAAAATGACGTACAA--CGGTATTTACCAATGACCCGGCCCGGAGCATACAAAGTGCCTGATTCCTCTCAGTTTCAGAAAGGCGTGGCATCGCTAAATAAAAG--TGTTT-TTTAAAACAAATTTAAT--TTTTTTTTTATCTGTGCTAAGCAACGAACGATTACTAGTCGGTGT-AAAACC-T---ATAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAACGAAAA----CGT-T------TTTTTTGTGCTCGGAC---GCAT-GA--ATTCTTCTTAAATGTT--G-AAGAAAAAAATGGAAAATGATTATCCGCAATTACATTCTGATAGCCATGTATAACACGTTTTGGAATATGTATGT----TAACAAAAGAAATATTCAAACATATGAAGTGTGAAGTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaacgcaatgagtacgtaacgttgttacacgaacgtaaccgggtctgacgtgagctctgatatatatctggtagtattgtaccggtttgctagaatataaatagtctatctggaataggcaaaatgacgtacaacggtatttaccaatgacccggcccggagcatacaaagtgcctgattcctctcagtttcagaaaggcgtggcatcgctaaataaaagtgttttttaaaacaaatttaattttttttttatctgtgctaagcaacgaacgattactagtcggtgtaaaacctataagtgaaaaaccggatgttgcgcacgtgcaaagtaacgaaaacgttttttttgtgctcggacgcatgaattcttcttaaatgttgaagaaaaaaatggaaaatgattatccgcaattacattctgatagccatgtataacacgttttggaatatgtatgttaacaaaagaaatattcaaacatatgaagtgtgaagttttcatt
gi|4 : acataaagtcctggctaagtgcaataactgatattttttaaaacgtcagtaaccactgtggaatccgtttttacgaatgtaatctataaacttacgtagtaacgctaaatgagcgtgtttggaatatgttgccatacaaacaaaagtgcatttcggaaatcgtgtatgttattaatttgatgcttggacctgacacacagagccaattaattccatttgtattctatggggttcaggttcggggttatagaggcattgccactggtatcgcgtgtattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGATTTAGTGCAATAATTGAT-TTTTTT-AAATCGTTAGTTACCAGTGTGGTGTTTGTTTTTACGAATGCAGTCCTGAATACGTCATCTCTATGAGCTTACGTA---ACGTTATATGAACGTGTTTGGAATACGTTGCTATTGCAACAGAAGTGCTTTTTGGAGGTTGTTTAT-G----GTATTAATTTGATG-TTGGACCTGGCTCTCCGACCCAGTTCGTTCCATACGTGTTCTATGGGATTCAGGCTCTAGGATACAGAGGCATTGTCACT-GGTT-TTGCGTGTATTGCAAATAATGTCGTACCCATGACAATCTGGAAGCTTTGTGGCGCACTGTCTGAATCTGACCAGTGTATGGCCGACGGGCGCGAATTAGAACATGGTTTTGTCTCAAACGGTTT-GTGATCGTCTGTGC-ATGAACACAACAACACCAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTACGTAGTTGAGTCAACGAAGTAGCGCGATGAGTAC----GTAACGTTGTTGCAAGTA-----CGCGACCGGGTCT-GAAACGATCTCTGACATAT--CCAGCAGCATTGTACCAGTTTGCAAGAATAGAAATAGTCTATCTGGAACAGCCAAAATGACATGCAA--CGGTATTTACCAATGACTCGGCCCGGAGCAAACCAATAGCCTGATTTCTCTCAGTTTCAGAATGACTTGGCA---------------TTGTTT-TTTA----------AG---TTTTTTTTTATCTGTGCTTAGCAACAAATGATTACTTGTCGTTGTAAAAACC-T---GTAA-----G--------TGAAAAACCGGATGTTGCGCACGTGCAAAG---TAAGGAAAAAGTGT---T------TTTTTTNNNNNNNNNNTAGGCATCGATCATACTTTGtcatt
gi|5 : taattttttaaa-G-TT-TCGAGTGTATTGCAAATGACGTCGTGCCAATAACAGTCTCGAAGCTCTGTGATGCGCTGTTGGAATC-GA---GTGAATGGCCGACAAGCACGAATACGAACACGGTTTTGTTTCAAAAGGCTT-ATGGTGATATATGC-ATGAACACCGTGACGCCGAGGAGT-ACTG-GTTGCAGGTAATAAAACGATAACGTCGGTGAGGTAACCTTATAGCGCGATGCGTAC----ATAACGTTGATACACGTATTATACACGACCGG-TCG-GATACGATCTCTGACATAT--CCAGTAGTATTGTACCGCTTCGCAGGAATATAAATAGTCTGCTCGGAACAAACATAATGGCGTGCAA--CGGTATTTACCAATGACCCGACCCGGAGCATACAAATACCTTGATTTCTCTCTGTTTCTGAAAAACGTTACATCG----ATAAAAGTTTGTTT-TTT----TAAA--GAA---GTTTTTCTTGTCTGTGCCAAGCAACAAATGATTAATTGTCAGTGT-A------------------------------AAAAACTGGATCTTGCGCACGTGCAAAG---TAAAGAAAA----C---G------TTTTATGTGCTCGGAC---GCAT-GA--ATAGTTCGGAAA-TTT--G-GAAATATAAATGCATAACGGGTATCCG-AATTAAATCCTGATAGCAATGTATAA-ACGTTTCCGAACATGTATGT----TAACAAAAGAAATATTAAAAC--ATAAAGTGTAAAGTTTcctctataatttgaaatattgacaactgctattgaccacgttaaacattttattaaatgttccagaataggttatatatttaaattaatgtaaa
gi|6 : AAAAATTAACATCGACTTC--AAAC-GTTTCT-C-T-TTTGCCGATAAAAGTTTATTTAGAGTTACAAAA-AG--TGTTCATTGAAACTTTATCATCAGTGGTTAAATTAATGTATCTGTGCAATTTGCTGGAAA--GAA--TCATACATCGCATGAGTTTTT-TTTT-CTTAACGATAAAATGAAGAAGATTCAAAATGAAAATTCCAGAAAAGTGAAAATTATCACGTAACATTTGAAAAAGACATACAGTGCTGAATGAGTGCAATAACTGAT-TTTTC--AAAACGTCAGTGACCAGTGTGGGCTCATAATTTACGAATGCATTCCTTA-TACGTCATTTCTCTG----TACACA---AAGTTGATTAAACGTATTTGGAATACGTTGCCATTCCAACATAAGTGCATTTCGAAGGTCGTTTAT-G----GTATCAATTTGACAATTTGACCTGACCCTCCAACCCAGTTCATTCCATACGTGATCTATGGGGTTCAGGCTCGGGGATACAGTGGCATTGtcattat
gi|7 : acactgaccccaaatgaaaatctaaaacaaacaATGAAAACTTTACAT-GACTTC--AAAATGTATCT-CTT-TT-GCTG-TTAATGTtgaacatatttatatatgtgtcg
gi|7 : cttacccaaaTGTTAATGTTTCTGTGTAATTTACTGGGGA--AAA--TCAGAGCTCGCGTG----TTT-TTTT-CTAAACAATTAAGTGAAGAAATGTCAGAATGAAAATTCTAGAAAAATGAAAATGATCACGTAAAATTTGAAAAA-------AATGCTGACTAAGTGCA-TAAATTGT-TTTTTT-AACACGTCAGTATTTAGTGTGGTCTCCGTTTTTACGAATGCATTCCTGAATACGTCATCTCTATGAACTTACGAA---ATGCTGAATGAGCGTGTTTGTATTACGTTGCCATTCCAACAGAAGTGCGTTTGGGAGGGCGTTTAT-G----GTATC-------------GACATGACCCGCCGACCCAGTTCATTCCGTACGTATTCTAAAAGGTTCTGGCTTTGGGATACAACGACATTGCCACT-ttctgtgtaatttactggggaaaatcagagctcgcgtgtttttttctaaacaattaagtgaagaaatgtcagaatgaaaattctagaaaaatgaaaatgatcacgtaaaatttgaaaaaaatgctgactaagtgcataaattgtttttttaacacgtcagtatttagtgtggtctccgtttttacgaatgcattcctgaatacgtcatctctatgaacttacgaaatgctgaatgagcgtgtttgtattacgttgccattccaacagaagtgcgtttgggagggcgtttatggtatcgacatgacccgccgacccagttcattccgtacgtattctaaaaggttctggctttgggatacaacgacattgccact
gi|8 : cttacccaaaatgaaaactttacatgacttcaaaatgtatctcttttgcCTCGCGGATACAGAGG-----------G-TT-TCCCGTGTGTTGCAAATGGCGTTGTGTCCATA------C---AGCCCTGTGACGCGCTGTCGGAATCTGACCAGTGTATGGCCGACAAGCACGAACTGAAACAGGATTTTATCTCAAACGGTTT-ATTATCGCCTGTGC-ATGAACACCTTAACGTCAAGGAGT-ACTG-ATTGCATGTCA-GAAACGATTACGTAAGTGAGTCAACGTAATACCGCGATGAGTAC----GTAACGTTGTTGCACGTA-----CGCGACGGGATCT-GACA-----------A-AT--CCAGTTGTATTGTATCGCTTCGCAAGACTATGAAAAGTCTATCTGGAACAGCAAAAATGACATGCAA--CGGTCTATACCAATGGACAG-------GCATGCATAAAGCCTGAATTCTATCAGTTTCAGAAATACGTGAGATAGCTA---AAAAG-TTGTTT-TTT
gi|9 : TGCATACGTCATCTTTATGAGCTTACGTA---ACGTTGAATGAGCGTGTTTGGAAAACAGTAACGTTCCAACAGAATTGCATCTCGGAGGTCAATTAT-G----GTATCAATTGGATGTTTGGATCTGACCCTCCGACCTAAGTCATTTCGTAGGTGTTCTATGAGAGTCATGTTCCGGGT------GGTATTGCCACTTG-TT-TCATGTG-----------ACGTCGTGCCCATAACAGTCCGGAAGCTCTGTGGAGCACTATCGGAATCCGACAAGTGTATGACCGACGAGGACGAATTTGAACACGTTTTTGTCTCAAACGGGCT-ATAATCGTCTGTGC-GTGAACATCGTAACGAAAAGGAGT-ACTG-GTTGCAGGTAA-GAAACGATTATGTAGGTGTGTCAACGTAATAGCGCGACG