lowQualScore : 111
lowQualScore : 2 4 222 5 5
lowQualScore : . . ... . .
lowQualScore : 4 2 888 3 9
consensus : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-G-TA-TACNCAA
Reference ( gi|4 ) : TGTAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-T-CA-TACACAA
gi|2 : TGTAGCAAAATGACCAAGGGGTCAACAACTCACGAGGGTAGGATACAA-G-TA-TACTCAA
gi|3 : aatTGTGACAAAATGACCAAGGG-TCGACAACTCACTGGGGTAGAATACAA-TATA-TACTCAA
gi|15 : caTGTAGCAAAATGAC-AAGGG-CCGACAACTCACTAAGTTAGAAT
gi|1 : TGTAGCAAAACGATCAAGGG-CCGACAACACACTGAGGTAGACTATAA-C-TATTACTCAAttaacttt
gi|14 : tTGTAGCAAAAT----AAGGG-CCAACAACTCACTAATGTACAATATAA-T-TACTACTCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|7 : GTAGCAAAATGACCAAGGG-CCGAAAACTCACGAGGGTAGAATACAA-G-TA-TACTCA
gi|18 : GTAGCAAAATGATAAATGG-CCGACAGCGCACGAAGGTAG
gi|8 : TAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-T-CA-TACACAA
gi|6 : TAGCAAAATGATCAAGGG-CCGACAACTCACGAGGGTAGAATACAAGTACA-TGCATA
gi|5 : TAGCAAAATGACCAATGG-CTGACAACTCATGACGGTAGAATACAA-G-TA-TACTCAA
gi|12 : AGCAAAATGGCCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-T-CG-TACAAAAa
gi|10 : AGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-G-TA-TGCTCAA
gi|9 : AGCAAAATAACCAAGGG-CCGACAACTTTCGAGGGTAGAATACAA-G-TA-AACTCAA
gi|13 : GCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-G-CA-TACACAAa
gi|11 : GCAAAATGACCAAGGG-CCGGCAACTCACAAGGGTAGAATACAA-G-CA-TACACAA
gi|16 : gGGG-CCGACAACTCACGAGGGTAGAATACAA-G-TA-TAC
gi|17 : G-CCGACAACTCACAAGGGTAAAATACAA-T-CA-TACACAAtata
Alignments
lowQualScore : 2 0 22 5 1
lowQualScore : . . .. . .
lowQualScore : 2 9 99 0 0
consensus : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
Reference ( family-2018 ) : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
gi|1 : TGTAGCAAAACGATCAAGGG-CCGACAACACACTGAGGTAGACTATAA-CTATTACTCAA
gi|10 : tAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-GTA-TGCTCAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|11 : GCAAAATGACCAAGGG-CCGGCAACTCACAAGGGTAGAATACAA-GCA-TACACAA
gi|12 : gAGCAAAATGGCCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCG-TACAAAA
gi|13 : GCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GCA-TACACAA
gi|14 : TGTAGCAAAAT----AAGGG-CCAACAACTCACTAATGTACAATATAA-TTACTACTCA
gi|15 : TGTAGCAAAATGAC-AAGGG-CCGACAACTCACTAAGTTAGAAT
gi|16 : GGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACttaacttt
gi|17 : G-CCGACAACTCACAAGGGTAAAATACAA-TCA-TACACAAtata
gi|18 : GTAGCAAAATGATAAATGG-CCGACAGCGCACGAAGGTAGg
gi|2 : TGTAGCAAAATGACCAAGGGGTCAACAACTCACGAGGGTAGGATACAA-GTA-TACTCAA
gi|3 : aatTGTGACAAAATGACCAAGGG-TCGACAACTCACTGGGGTAGAATACAATATA-TACTCAA
gi|4 : caTGTAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCA-TACACAA
gi|5 : TAGCAAAATGACCAATGG-CTGACAACTCATGACGGTAGAATACAA-GTA-TACTCAA
gi|6 : TAGCAAAATGATCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-CATGCAa
gi|7 : GTAGCAAAATGACCAAGGG-CCGAAAACTCACGAGGGTAGAATACAA-GTA-TACTCAta
gi|8 : TAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCA-TACACAA
gi|9 : AGCAAAATAACCAAGGG-CCGACAACTTTCGAGGGTAGAATACAA-GTA-AACTCAA
Alignments
lowQualScore : 2 0 22 5 1
lowQualScore : . . .. . .
lowQualScore : 2 9 99 0 0
consensus : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
Reference ( family-2018 ) : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
gi|1 : TGTAGCAAAACGATCAAGGG-CCGACAACACACTGAGGTAGACTATAA-CTATTACTCAA
gi|10 : tAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-GTA-TGCTCAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|11 : GCAAAATGACCAAGGG-CCGGCAACTCACAAGGGTAGAATACAA-GCA-TACACAA
gi|12 : gAGCAAAATGGCCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCG-TACAAAA
gi|13 : GCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GCA-TACACAA
gi|14 : TGTAGCAAAAT----AAGGG-CCAACAACTCACTAATGTACAATATAA-TTACTACTCA
gi|15 : TGTAGCAAAATGAC-AAGGG-CCGACAACTCACTAAGTTAGAAT
gi|16 : GGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACttaacttt
gi|17 : G-CCGACAACTCACAAGGGTAAAATACAA-TCA-TACACAAtata
gi|18 : GTAGCAAAATGATAAATGG-CCGACAGCGCACGAAGGTAGg
gi|2 : TGTAGCAAAATGACCAAGGGGTCAACAACTCACGAGGGTAGGATACAA-GTA-TACTCAA
gi|3 : aatTGTGACAAAATGACCAAGGG-TCGACAACTCACTGGGGTAGAATACAATATA-TACTCAA
gi|4 : caTGTAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCA-TACACAA
gi|5 : TAGCAAAATGACCAATGG-CTGACAACTCATGACGGTAGAATACAA-GTA-TACTCAA
gi|6 : TAGCAAAATGATCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-CATGCAa
gi|7 : GTAGCAAAATGACCAAGGG-CCGAAAACTCACGAGGGTAGAATACAA-GTA-TACTCAta
gi|8 : TAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCA-TACACAA
gi|9 : AGCAAAATAACCAAGGG-CCGACAACTTTCGAGGGTAGAATACAA-GTA-AACTCAA
blockSeqs : G TA C T
blockSeqs : . G . A
blockSeqs : . G . A
blockSeqs : . T . A
blockSeqs : . G . T
blockSeqs : . T . A
blockSeqs : . G . T
blockSeqs : . T . T
blockSeqs : . G . A
blockSeqs : . T . T
blockSeqs : . G . G
blockSeqs : . G . T
blockSeqs : . G . A
blockSeqs : . T . T
blockSeqs : . G .
blockSeqs : .
blockSeqs : .
blockSeqCons :
originalCons : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
finalCons : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
Alignments
lowQualScore : 2 0 22 5 1
lowQualScore : . . .. . .
lowQualScore : 2 9 99 0 0
consensus : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
Reference ( family-2018 ) : TGTAGCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACNCAA
gi|1 : TGTAGCAAAACGATCAAGGG-CCGACAACACACTGAGGTAGACTATAA-CTATTACTCAA
gi|10 : tAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-GTA-TGCTCAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|11 : GCAAAATGACCAAGGG-CCGGCAACTCACAAGGGTAGAATACAA-GCA-TACACAA
gi|12 : gAGCAAAATGGCCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCG-TACAAAA
gi|13 : GCAAAATGACCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GCA-TACACAA
gi|14 : TGTAGCAAAAT----AAGGG-CCAACAACTCACTAATGTACAATATAA-TTACTACTCA
gi|15 : TGTAGCAAAATGAC-AAGGG-CCGACAACTCACTAAGTTAGAAT
gi|16 : GGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-TACttaacttt
gi|17 : G-CCGACAACTCACAAGGGTAAAATACAA-TCA-TACACAAtata
gi|18 : GTAGCAAAATGATAAATGG-CCGACAGCGCACGAAGGTAGg
gi|2 : TGTAGCAAAATGACCAAGGGGTCAACAACTCACGAGGGTAGGATACAA-GTA-TACTCAA
gi|3 : aatTGTGACAAAATGACCAAGGG-TCGACAACTCACTGGGGTAGAATACAATATA-TACTCAA
gi|4 : caTGTAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCA-TACACAA
gi|5 : TAGCAAAATGACCAATGG-CTGACAACTCATGACGGTAGAATACAA-GTA-TACTCAA
gi|6 : TAGCAAAATGATCAAGGG-CCGACAACTCACGAGGGTAGAATACAA-GTA-CATGCAa
gi|7 : GTAGCAAAATGACCAAGGG-CCGAAAACTCACGAGGGTAGAATACAA-GTA-TACTCAta
gi|8 : TAGCAAAATGACCAAGGG-CCGACAACTCACAAGGGTAGAATACAA-TCA-TACACAA
gi|9 : AGCAAAATAACCAAGGG-CCGACAACTTTCGAGGGTAGAATACAA-GTA-AACTCAA