lowQualScore : 11111111 1 111
lowQualScore : 3 2 44 3 1 2 2 2 2 3 00000000 33 33 4 4 5 777 0 3 2 5 2 6 0 111
lowQualScore : . . .. . . . . . . . ........ .. .. . . . ... . . . . . . . ...
lowQualScore : 3 4 22 1 2 0 9 9 9 7 44444444 99 99 0 0 0 111 1 4 2 0 2 7 3 777
consensus : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCCATGACGTCGTAAGTATATTAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
Reference ( gi|133893 ) : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133895 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AAAA-TACCGTGTTTTCAGTGAAATATGCCATTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATAAA-ACGACGACATTTATTTTAAACGTCAAA---AGTACAACTGGTATTATTAAA
gi|133894 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAAATCAAAC--------TG--TGCTG--AGTAAAATGTGGAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-TCGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133896 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGCGCTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG----CTG--GGTAAAATGTGAAGCCCATAGTTGG-TAT-TAAAGAAAATGTC-ACT--CTGACTTGACGTCACACAACGTCCTGTACTCTTTAGCGCTTTGGCGTCATAAGTATATCAA-ACAACAGCATTTATTTTAAACGTCAAA---AATATAATTGGCATTATTAAA
gi|133897 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-T
gi|133898 : ATATACTTACATAAAAATATAAA--GCAAA-CTGTGAAATTTATAAGAA-AA-A-TAACGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTATATATATAAA
gi|133899 : ATATACTT-CACAAAAATATATA--ACGAA-TTGTGAAATTTTTAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--A
gi|133900 : ATAGACTA-CACATAAATAAAGA--TCAAA-TTGTAAAATTTATATGAA-AA-AATACGGTGTTTTAAGTAAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--CATAAAATGTGAAAC
gi|133901 : ATATACTA-TACACAAATA-AAAGGACGAAGTTTT----TTTAT--GAA-AG-A-TACCATGTTTTAAGTAAAATACGCCGGTAAAATTCGACT--------TG--TGCTG--CGTAAGATGTGAAACGCAAA
gi|133902 : ATATACTT-CGCAAAAAAA-AAA--GCAAA-TTGTAAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATA
gi|133903 : TATACTT-CACAAAAATATGAA--ACCAA-TTGTGAAATTTATATGAA-AA-A-TACCGTGTTTTTAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AATAAAATGTCAAGTTTAAAGTTGT-TAT-TAAAGAAAACGTC-ACA--CTGACGTGACATCACACAA-GTCGTAAACTCTTTAGCGCCATGACGTCGTATATATAT
gi|133904 : TACTT----AAAAGTATAAA--TTAAA-TTATCAA-TTTATATGAA-AA-A-TACAAT-TTTTAAGTGAAATGTTCCGGTATAATTCAAACTACATGTATG--TGCTGCAAGTAAa
gi|133905 : -CACAACAATATAGA--TCAAA-TTGTCAAAGTTTTATGAA-AA-A-TACTGTGTTTAAGGTAAAATATTCCGATATAATTAAAAC--------TGTATGTTG--CGTAAAATGTGTACCGCAAAGTTGT-TAT-TCAAAAA---GTC-A---------------TCACACAACGTTGTGTACTTTTTA
gi|133906 : ACAAAAAGAGCAA--ACAAA-TT-------TTAAAAGAT-AA-A--ACC-TATTTTTAATGAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCATAAAGTTGT-TAT-TAAAGAAAACGTC-ACG--CTGACG---------------TCGTATATTCTTTAGCGCCATGATGTCGTAAGTAT-TTAC-ACGGCAACATTTATTTTAAACGCCAAA---AATACAACTGCTTTTATTAAA
gi|133907 : TGAAATTTATATGAACAA-A-TACCGCGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTATAATGCGAAACGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACATAACGTCGTGCACTCTTTAGCGCTATGACGTCGTAAGTGT-TTGC-ACGGCGACATTTATTTTAAACGT-AAA---AATACAACTGGTATTATTAAA
gi|133908 : --------TG--TGCTG--CGTAAAATATATAACGCAAAATTGT-TAT-TCAAAATGACGTTTATTATCTAGCGTGATGTCACATTACGTCATGTGCTGGTTAGCGCCATGTTGTCATAAACA-ATTAACAAGTCGACACGTAGATTAAAAGTCAAAGTTAATACAACTGATCTTAT
Alignments
lowQualScore : 111
lowQualScore : 3 1 33 2 0 1 2 2 2 99999999 33 33 3 3 4 66 0 3 1 5 000
lowQualScore : . . .. . . . . . . ........ .. .. . . . .. . . . . ...
lowQualScore : 1 6 99 9 5 3 7 7 7 77777777 77 77 6 6 4 11 8 2 1 7 000
consensus : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
Reference ( family-904 ) : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCCATGACGTCGTAAGTATATTAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133893 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133894 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAAATCAAAC--------TG--TGCTG--AGTAAAATGTGGAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-TCGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133895 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AAAA-TACCGTGTTTTCAGTGAAATATGCCATTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATAAA-ACGACGACATTTATTTTAAACGTCAAA---AGTACAACTGGTATTATTAAA
gi|133896 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGCGCTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG----CTG--GGTAAAATGTGAAGCCCATAGTTGG-TAT-TAAAGAAAATGTC-ACT--CTGACTTGACGTCACACAACGTCCTGTACTCTTTAGCGCTTTGGCGTCATAAGTATATCAA-ACAACAGCATTTATTTTAAACGTCAAA---AATATAATTGGCATTATTAAA
gi|133897 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-T
gi|133898 : ATATACTTACATAAAAATATAAA--GCAAA-CTGTGAAATTTATAAGAA-AA-A-TAACGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTATATATATAAA
gi|133899 : ATATACTT-CACAAAAATATATA--ACGAA-TTGTGAAATTTTTAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--A
gi|133900 : ATAGACTA-CACATAAATAAAGA--TCAAA-TTGTAAAATTTATATGAA-AA-AATACGGTGTTTTAAGTAAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--CATAAAATGTGAAAC
gi|133901 : ATATACTA-TACACAAATA-AAAGGACGAAGTTTT----TTTAT--GAA-AG-A-TACCATGTTTTAAGTAAAATACGCCGGTAAAATTCGACT--------TG--TGCTG--CGTAAGATGTGAAACGCAAA
gi|133902 : ATATACTT-CGCAAAAAAA-AAA--GCAAA-TTGTAAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATA
gi|133903 : TATACTT-CACAAAAATATGAA--ACCAA-TTGTGAAATTTATATGAA-AA-A-TACCGTGTTTTTAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AATAAAATGTCAAGTTTAAAGTTGT-TAT-TAAAGAAAACGTC-ACA--CTGACGTGACATCACACAA-GTCGTAAACTCTTTAGCGCCATGACGTCGTATATATAT
gi|133904 : TACTT----AAAAGTATAAA--TTAAA-TTATCAA-TTTATATGAA-AA-A-TACAAT-TTTTAAGTGAAATGTTCCGGTATAATTCAAACTACATGTATG--TGCTGCAAGTAAa
gi|133905 : -CACAACAATATAGA--TCAAA-TTGTCAAAGTTTTATGAA-AA-A-TACTGTGTTTAAGGTAAAATATTCCGATATAATTAAAAC--------TGTATGTTG--CGTAAAATGTGTACCGCAAAGTTGT-TAT-TCAAAAA---GTC-A---------------TCACACAACGTTGTGTACTTTTTA
gi|133906 : ACAAAAAGAGCAA--ACAAA-TT-------TTAAAAGAT-AA-A--ACC-TATTTTTAATGAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCATAAAGTTGT-TAT-TAAAGAAAACGTC-ACG--CTG---------------ACGTCGTATATTCTTTAGCGCCATGATGTCGTAAGTAT-TTAC-ACGGCAACATTTATTTTAAACGCCAAA---AATACAACTGCTTTTATTAAA
gi|133907 : TGAAATTTATATGAACAA-A-TACCGCGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTATAATGCGAAACGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACATAACGTCGTGCACTCTTTAGCGCTATGACGTCGTAAGTGT-TTGC-ACGGCGACATTTATTTTAAACGT-AAA---AATACAACTGGTATTATTAAA
gi|133908 : --------TG--TGCTG--CGTAAAATATATAACGCAAAATTGT-TAT-TCAAAATGACGTTTATTATCTAGCGTGATGTCACATTACGTCATGTGCTGGTTAGCGCCATGTTGTCATAAACA-ATTAACAAGTCGACACGTAGATTAAAAGTCAAAGTTAATACAACTGATCTTAT
Alignments
lowQualScore : 111
lowQualScore : 3 1 33 2 0 1 2 2 2 99999999 33 33 3 3 4 66 0 3 0 5 000
lowQualScore : . . .. . . . . . . ........ .. .. . . . .. . . . . ...
lowQualScore : 1 6 99 9 5 3 7 7 7 77777777 77 77 6 6 4 11 8 2 4 7 000
consensus : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
Reference ( family-904 ) : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133893 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133894 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAAATCAAAC--------TG--TGCTG--AGTAAAATGTGGAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-TCGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133895 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AAAA-TACCGTGTTTTCAGTGAAATATGCCATTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATAAA-ACGACGACATTTATTTTAAACGTCAAA---AGTACAACTGGTATTATTAAA
gi|133896 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGCGCTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG----CTG--GGTAAAATGTGAAGCCCATAGTTGG-TAT-TAAAGAAAATGTC-ACT--CTGACTTGACGTCACACAACGTCCTGTACTCTTTAGCGCTTTGGCGTCATAAGTATATCAA-ACAACAGCATTTATTTTAAACGTCAAA---AATATAATTGGCATTATTAAA
gi|133897 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-T
gi|133898 : ATATACTTACATAAAAATATAAA--GCAAA-CTGTGAAATTTATAAGAA-AA-A-TAACGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTATATATATAAA
gi|133899 : ATATACTT-CACAAAAATATATA--ACGAA-TTGTGAAATTTTTAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--A
gi|133900 : ATAGACTA-CACATAAATAAAGA--TCAAA-TTGTAAAATTTATATGAA-AA-AATACGGTGTTTTAAGTAAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--CATAAAATGTGAAAC
gi|133901 : ATATACTA-TACACAAATA-AAAGGACGAAGTTTT----TTTAT--GAA-AG-A-TACCATGTTTTAAGTAAAATACGCCGGTAAAATTCGACT--------TG--TGCTG--CGTAAGATGTGAAACGCAAA
gi|133902 : ATATACTT-CGCAAAAAAA-AAA--GCAAA-TTGTAAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATA
gi|133903 : TATACTT-CACAAAAATATGAA--ACCAA-TTGTGAAATTTATATGAA-AA-A-TACCGTGTTTTTAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AATAAAATGTCAAGTTTAAAGTTGT-TAT-TAAAGAAAACGTC-ACA--CTGACGTGACATCACACAA-GTCGTAAACTCTTTAGCGCCATGACGTCGTATATATAT
gi|133904 : TACTT----AAAAGTATAAA--TTAAA-TTATCAA-TTTATATGAA-AA-A-TACAAT-TTTTAAGTGAAATGTTCCGGTATAATTCAAACTACATGTATG--TGCTGCAAGTAAa
gi|133905 : -CACAACAATATAGA--TCAAA-TTGTCAAAGTTTTATGAA-AA-A-TACTGTGTTTAAGGTAAAATATTCCGATATAATTAAAAC--------TGTATGTTG--CGTAAAATGTGTACCGCAAAGTTGT-TAT-TCAAAAA---GTC-A---------------TCACACAACGTTGTGTACTTTTTA
gi|133906 : ACAAAAAGAGCAA--ACAAA-TT-------TTAAAAGAT-AA-A--ACC-TATTTTTAATGAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCATAAAGTTGT-TAT-TAAAGAAAACGTC-ACG--CTG---------------ACGTCGTATATTCTTTAGCGCCATGATGTCGTAAGTAT-TTAC-ACGGCAACATTTATTTTAAACGCCAAA---AATACAACTGCTTTTATTAAA
gi|133907 : TGAAATTTATATGAACAA-A-TACCGCGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTATAATGCGAAACGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACATAACGTCGTGCACTCTTTAGCGCTATGACGTCGTAAGTGT-TTGC-ACGGCGACATTTATTTTAAACGT-AAA---AATACAACTGGTATTATTAAA
gi|133908 : --------TG--TGCTG--CGTAAAATATATAACGCAAAATTGT-TAT-TCAAAATGACGTTTATTATCTAGCGTGATGTCACATTACGTCATGTGCTGGTTAGCGCCATGTTGTCATAAACA-ATTAACAAGTCGACACGTAGATTAAAAGTCAAAGTTAATACAACTGATCTTAT
blockSeqs : A T GG G A C A A TACATGTA TA CA A A T AT A C GTT
blockSeqs : . T . . A . . . . . . . . . . A . .
blockSeqs : . T . . A . . . . . . . . . . A . .
blockSeqs : . T . . A . . . . . . . . . . A . .
blockSeqs : . T . . A . . . . . . . . . . A . .
blockSeqs : . T . . A . . . . . . . . . . . . .
blockSeqs : . A . . T . . . . . . . . . . .
blockSeqs : . T . . A . . . . . . . . . .
blockSeqs : . T . . T . . . . . . . .
blockSeqs : . T . . T . . . . . . . .
blockSeqs : . G . . T . . . . . .
blockSeqs : . . . . A . . . . . .
blockSeqs : . . . T . . . . . .
blockSeqs : . . . . . . .
blockSeqCons :
originalCons : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
finalCons : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
Alignments
lowQualScore : 111
lowQualScore : 3 1 33 2 0 1 2 2 2 99999999 33 33 3 3 4 66 0 3 0 5 000
lowQualScore : . . .. . . . . . . ........ .. .. . . . .. . . . . ...
lowQualScore : 1 6 99 9 5 3 7 7 7 77777777 77 77 6 6 4 11 8 2 4 7 000
consensus : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
Reference ( family-904 ) : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACGTCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133893 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATCAA-ACGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133894 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAAATCAAAC--------TG--TGCTG--AGTAAAATGTGGAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTACTCTTTAGCGCTATGACGTCGTAAGTATATCAA-TCGACGACATTTATTTTAAACGTCAAA---AATACAACTGGTATTATTAAA
gi|133895 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AAAA-TACCGTGTTTTCAGTGAAATATGCCATTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACACAACATCGTGTAATCTTTAGCGCTATGACGTCGTAAGTATATAAA-ACGACGACATTTATTTTAAACGTCAAA---AGTACAACTGGTATTATTAAA
gi|133896 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGCGCTTTCAGTGAAATACGCCAGTAAAATTCAAAC--------TG----CTG--GGTAAAATGTGAAGCCCATAGTTGG-TAT-TAAAGAAAATGTC-ACT--CTGACTTGACGTCACACAACGTCCTGTACTCTTTAGCGCTTTGGCGTCATAAGTATATCAA-ACAACAGCATTTATTTTAAACGTCAAA---AATATAATTGGCATTATTAAA
gi|133897 : ATATACTT-CACAAAAATATAAA--ACAAA-TTGTGAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTGT-TAT-T
gi|133898 : ATATACTTACATAAAAATATAAA--GCAAA-CTGTGAAATTTATAAGAA-AA-A-TAACGTGTTTTCAGTGAAATACGCCGGTAAAATTCGAAC--------TG--TGCTG--AGTAAAATGTGAAGCGCAAAGTTATATATATAAA
gi|133899 : ATATACTT-CACAAAAATATATA--ACGAA-TTGTGAAATTTTTAAGAA-AA-A-TACCGTGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--A
gi|133900 : ATAGACTA-CACATAAATAAAGA--TCAAA-TTGTAAAATTTATATGAA-AA-AATACGGTGTTTTAAGTAAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--CATAAAATGTGAAAC
gi|133901 : ATATACTA-TACACAAATA-AAAGGACGAAGTTTT----TTTAT--GAA-AG-A-TACCATGTTTTAAGTAAAATACGCCGGTAAAATTCGACT--------TG--TGCTG--CGTAAGATGTGAAACGCAAA
gi|133902 : ATATACTT-CGCAAAAAAA-AAA--GCAAA-TTGTAAAATTTATAAGAA-AA-A-TACCGTGTTTTCAGTGAAATA
gi|133903 : TATACTT-CACAAAAATATGAA--ACCAA-TTGTGAAATTTATATGAA-AA-A-TACCGTGTTTTTAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AATAAAATGTCAAGTTTAAAGTTGT-TAT-TAAAGAAAACGTC-ACA--CTGACGTGACATCACACAA-GTCGTAAACTCTTTAGCGCCATGACGTCGTATATATAT
gi|133904 : TACTT----AAAAGTATAAA--TTAAA-TTATCAA-TTTATATGAA-AA-A-TACAAT-TTTTAAGTGAAATGTTCCGGTATAATTCAAACTACATGTATG--TGCTGCAAGTAAa
gi|133905 : -CACAACAATATAGA--TCAAA-TTGTCAAAGTTTTATGAA-AA-A-TACTGTGTTTAAGGTAAAATATTCCGATATAATTAAAAC--------TGTATGTTG--CGTAAAATGTGTACCGCAAAGTTGT-TAT-TCAAAAA---GTC-A---------------TCACACAACGTTGTGTACTTTTTA
gi|133906 : ACAAAAAGAGCAA--ACAAA-TT-------TTAAAAGAT-AA-A--ACC-TATTTTTAATGAAATACGCTGGTAAAATTCAAAC--------TG--TGCTG--AGTAAAATGTGAAGCATAAAGTTGT-TAT-TAAAGAAAACGTC-ACG--CTG---------------ACGTCGTATATTCTTTAGCGCCATGATGTCGTAAGTAT-TTAC-ACGGCAACATTTATTTTAAACGCCAAA---AATACAACTGCTTTTATTAAA
gi|133907 : TGAAATTTATATGAACAA-A-TACCGCGTTTTCAGTGAAATACGCCGGTAAAATTCAAAC--------TG--TGCTG--AGTATAATGCGAAACGCAAAGTTGT-TAT-TAAAGAAAACGTC-ACT--CTGACGTGACGTCACATAACGTCGTGCACTCTTTAGCGCTATGACGTCGTAAGTGT-TTGC-ACGGCGACATTTATTTTAAACGT-AAA---AATACAACTGGTATTATTAAA
gi|133908 : --------TG--TGCTG--CGTAAAATATATAACGCAAAATTGT-TAT-TCAAAATGACGTTTATTATCTAGCGTGATGTCACATTACGTCATGTGCTGGTTAGCGCCATGTTGTCATAAACA-ATTAACAAGTCGACACGTAGATTAAAAGTCAAAGTTAATACAACTGATCTTAT