lowQualScore : 11 11 222 111111 1111111111111 1111111111111111 2222222 111 111111111111 111111111 11 1 22 22 1 1
lowQualScore : 3 3 0 3 33 4 1 99 55 777 4444 555 5 2 2 555555 33 3333333333333 5555555555555555 1 6 33 77 2 5555555 000 1 888888888888 8 33 2 222222222 2 999999 2 3 2 00 2 7 33 5 3 4 1 3 3 2 00 888 44 55 4 6 8 8 6 1 555 4 1
lowQualScore : . . . . .. . . .. .. ... .... ... . . . ...... .. ............. ................ . . .. .. . ....... ... . ............ . .. . ......... . ...... . . . .. . . .. . . . . . . . .. ... .. .. . . . . . . ... . .
lowQualScore : 3 9 6 0 99 0 2 66 88 111 6666 000 9 1 9 555555 99 6666666666666 1111111111111111 9 1 99 55 7 4444444 000 4 222222222222 2 11 1 666666666 9 000000 9 1 9 22 9 7 00 2 2 2 1 2 1 6 77 111 22 22 7 2 2 5 7 2 444 0 8
consensus : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANATT--CGAC---TNCCAGTNAGATAATA-C-GAT--GG--CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTT-GTTA-TA---TGN-GT---TTTAA--AG---ATCGATAANGT-TTCTGAGCNAC-----G-N-ATG-TGCT-CG-G-GAAGNGTATTCCA-ANNAG-AAACACACGANGGAATAAACGAATTTGCANATAATTGT-GTTCTCGT-NTTNG-AA--ACAACGTAATCGGANGCATTTC-TAAGGTTGTANGGTGTAT---TNACTCCTACTGTT
Reference ( gi|22287 ) : TGAGATGACTACATCCGTTTCTCAAA--CGAGCGTGGA--AAACTGATACAATT--CGAC---TACCAGTTAGATAATA-C-GAT--GG--TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTT-GTTA-TA---TGA-GT---TTTAA--AA---ATCGATAAAGT-CTCTGAGTTAC-----G-A-ATG-TACT-CG-G-GAAGTGTATTCCA-AATAG-ATACGCATGACGGAATAAACGAATTTGCAAATAGTTTT-GTTCTTGT-TTTAA-AA--ACAACTTAATCGGAAGTATTTCGTAA-GTTGTAAGGTGTAT---TTACTCCTACTGTT
gi|22286 : TAAGGTGACTACATCCGTTTTTCAAA--CGAGCGTAGA--GAACTGATAAAATT--CGAC---TACCAGTTAGATAATA-C-GAT--GG--TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTT-GTTA-TA---TGT-GT---CTTAA--AA---ACCGATAAATT-CTCTGAGTTAC-----G-A-ATG-TACT-CG-G-GAAGTGTATTCCA-AATAG-ATACGCCTGACGAAATAAACGAATATGCAAATAGTTGT-GTTCTTGT-GTTTA-AA--ACAACATAATCGGAAGCATTTCGTAA-GTTGTAAGGTGTAT---TAACTCCTACTGTT
gi|22288 : TAAGGTGTCTACATCCGTTTCTCAAA--CGAGCATGGA--GAACTGATA-AATT--CGAC---TACCAGTTAAATAGTA-T-AAT--GG--TAC-TGTT--------TG--CGT------TTTA-AAGTACAT--GTTT-GCTA-TA---TGT-GT---TTTAA--AA----CCGATAAAGT-CTCTGAGTTAA-----G-A-ATG-TACT-CG-G-GAAGTGTATTCCA-AATAG-ATAAGCATGACGAAATAAACGAATTTGCAAATAGTTGT-GTTCTTGT-GTTAA-AA--ACATCATTATCGGAAGAATTTCGTAA-ATTGTAAGATGTAT---TTACTCCTACTGTT
gi|22289 : TAAGGTGACTGCATCCGTTTCTCAAA--CGAGCGTGGA--GAACTGATAAAATT--CGAC---TACTAGTTAGATAATA-C-GAT--GG--TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTT-GTTA-TG---TGT-GG---TTTAC--GA---ACAGATAACGT-CTCTGAGATAA-----A-A-ATATTACT-CG-G-GAAGTGTACTCCA-AATAG-ATACGCATGACAGAATAAACG-ATTTGCAAATAGTTGT-GTTCTTGT-GTTAA-AA--ACAACATAATCGGAAGAATTTCGTAA-GTTGAAAGATGTAT---TTATTTCTACTGTT
gi|22290 : TAAGGTGACCATAGCCGTTTCCCAAA--CGAGCGTGGA--GAACTGATAAAATT--TGAC---TACCAGTAAGATAATA-C-GTT--GG--TAC-CTTT--------TG--TGT------TTTT-AAATACAG--GTTT-ATTA-TA---TGT-GT---TTTGA--AA---AT----AAAGT-CTCTGGGTTAC-----T-A-ATG-TGCT-CC-A-GAAGTGTATTCAA-GATAG-ATACACATGACGGAATAAACGAATTTGCAAATAGTTGT-GTTCTTGT-GTTAA-AA--ACAATATAATCGGAAGAATTTCGTAA-GTTGTAAGGTGTAT---TTACTCCTACTGTT
gi|22291 : TAAGATGACTACATCCGTTTATCAAA--CGAGCGTGGA--AAACTGATAAAATT--TGAC---TACCAGCTAGATAATA-C-GAT--GG--TAC-TATT--------TG--CGT------TTTA-AAATACAT--GTTT-GTTA-TA---GGA-GT---TTTAA--AC---ATTTATAAAGT-CTCTAAGTTAC-----G-A-ATG-TACT-CG-G-GAAGTGTATTCCA-AATAG-ATACGCAT
gi|22293 : TGAAGTCACTACATTCATTTCGAAGT--CGAGCAAGGA--TAACGGA-A-AATT---GACGTGTACCAACTAGATAATA-T-GAT--GGAATTT-CACT--------TC--TG--------TTG-AAATG-GG--ATTT-ACT--TA---TAACAT---TTTTA--AA---ATTACTAAGATATTCTATATTTCTTTCAG-A-A-G-TA----G-GTAAAATG--TTCCATAGT-G-AAACAGAAGATGGCACAAAAG-ATTTAGAGAAAATTTCAGTTCTTGT-ATTAA-CG--ATAACGTAATCGTACGCATTACACAA-ACCATAA--T-TATTAATTGATCCTACTGT
gi|22294 : AGGTTACTACAACCATTTCTTAAA--CGTGCATGAA--AAATAGATA--ATTTACGAG---GGCCTGCTAAAAAA-A-C--AT--AG--TAA-TATGG-------TG--GAT------TT---AAACAGAT--GCTT---CA-TAAGCTGGTGT---TTGAA--TG---AT-GATAGAGT-TTCAGAATTGC-----G-T-AAG-TATT-CC-G-GAAGACAATTCCA-AGAAG-AAATACATGATGGAATAAAAGAATTTCTAAATAATTGA-GTTCTAGTATTTAATAA--AGAA--TAATTACTATTATTTTTTAG-ATTATACGGTGTAG---TTATTTCTACAGTT
gi|22292 : TGACTACATCCGTTTCTCAAA--CGAGGGTGGA--GAACTGATAACATT--CG-T---TG-----TAGGTAATA-T--ATTAAG--CACTTATTTTTATTTATG--CATGTAAACTTT--AAATACAT--GTTTCATTA-T
gi|22295 : taaagACTACACCCGTTTCTAATG--CGTGCGTGTATTAAA--GATAACTTT--CTAT---TTCCAGTAATATAATA-CTGA---GG--CAC-TGGT--------TGTACGT------T----AAAGAAAT----TT-GTGA-C----TGAAGTACGTTTAA--AA---GACATTTATGT-TTCTGAGCAAC-----G-T-ATG-TGTT-GA-G-GAAGGGTGTTCCA-A-TAGGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-ATTCTCATATTTCG-AA--CTAAC--AATTGGATGCATTTC-TAAGGTTGTATGGTATAT---TAACACCTATTGTTgcgtgt
gi|22296 : ACTACACCCATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTT--CTAT---TTCCAGTAAGATAATA-C-TGT--GG--CAC-TGGT--------TGTACGT------TTAAGAAATTGGT--GACT-AAAA-TA---CG-------TTTGA--AG---GGCATTAATGA-TTCTGAGCAAC-----GTATATG-TA----GAG-GAAGGGTGTTCCA-ATAAG-AAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTG-GA--ACTATGTAATCGGATGCATTTC-TAAGGTTGTATGGTATAT---TAACACCTATTGTT
gi|22297 : ACTACACCAATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTT--CTAT---TTCCAGTAAGATAATA-C-TGT--GG--CAC-TGGT--------TG--TAC------GTTA-AAGAAATT--GGTG-ACTA-AAA--TAC-GT---TTGAA--GG---A-CATTAATGA-TTCTGAGCAAC-----G-T-ATG-TGTA-GG-G-GAAAGG-ATTCCA-ATAAG-AAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTG-GA--ACTATGTAATCGGATGCATTTC-TAAGGTTGTATGGTATAT---TAACACCTATTGTT
gi|22298 : ACTACACCGATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTT--CTAT---TTCCAGTAAGATAATA-CTGA---GG--CAC-TGGT--------TG--TAA------GTTA-AAG---AA--ATTG-GTGACTA----AA-GTACGTTTGA--AG---GACATTAATGA-TTCTGAGCAAC-----T-C-ATG-TGTT-GA-G-GAAGGGTGTTCCA-ATAAG-AAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTG-GA--ACTATGTAATCGGATGCATTTC-TAAGGTTGCATGGTATAT---TAACACCTATTGTT
gi|22299 : ACTACACCCATTTC--AAATGCGTGCGTGTATTAAA--GATAACTTT--TTAT---TTCAAGTAAGATAATA-CTGA---GG--CAC-TGGT--------TGAACGT------T----AAAGAAATTGGTGT-CTAA-AG---TAC-GT---TTGAAGGAC---ATTTATGA----TTCTGAGCAAC-----G-T-ATG-TTTT-GA-G-GAAGGGTGTTCCA-ATAAG-AAAGACACGAGGGAATGAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTG-GA--ACTATGTAATCGGACGCATTTC-TAAGGTTGTACGGTATAT---TAACACCTATTGTT
gi|22300 : TTAAA--CGTGCATGAA--AAGAAGATA--ATT--T-AC---T-----TTAAATAAAAAC-AA---GG--TAT-T-TT--------TG--TGT------TC---AAACAAAT--GATT---CA-TAAACTGACGT---TTGAA--TG---AT-GATAGAGT-TTCAGAATTGC-----A-T-AAG-TGCTTCG-G-GAGAT-TATTCCA-AGAAG-AAATACATGGTGGAATAAAAGAAT-----AATAATTGA-GTTCTAGTATTTAATAA--AGAA--TAATTATTATTGTTTCTTAG-ATAATATGGTGCAG---TTATTACTACAGTT
gi|22301 : TTA-CA---TAC-GT---TT-AA--AAGACATTTATGA----TTTTAAGCAAC-----G-T-ATA-TG-T-CGAG-GAAGGGTGTTCCA-ATCAG-AAATACACGAACGAATAAATGGGGTTTCATATAATTGT-GCTCTGATATTTGG-AACTATAA---AATCGAATGCATTTC-TAATGTTGTATGATATAT---
Alignments
lowQualScore : 11 11 111111 1111111111111 22222222222222222222222222222 111111111111 2222 1 1
lowQualScore : 1 0 33 1 0 88 33 88 77777777 1 3 66666 000000 777777 4444444444444 33333333333333333333333333333 1 444 888 777777777777 4 0 1111 1 2 22 1 2 3 444 444 66666 22 1 0 1 2 1 2 2 33 666 0 9999 1 5 1 1 1 1
lowQualScore : . . .. . . .. .. .. ........ . . ..... ...... ...... ............. ............................. . ... ... ............ . . .... . . .. . . . ... ... ..... .. . . . . . . . .. ... . .... . . . . . .
lowQualScore : 6 5 77 0 5 33 55 33 33333333 0 6 77777 333333 555555 2222222222222 33333333333333333333333333333 0 444 888 888888888888 1 3 1111 0 7 77 0 7 1 111 777 77777 00 4 8 0 2 0 9 2 99 555 3 4444 0 4 2 0 0 8
consensus : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TT--------------TAAAATACAT--GTTT-G-TTAT----A---TGC-GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGT-ATTTGGAACAACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNACTCCTACTGTT
Reference ( family-886 ) : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANATTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TT--------------TAAAATANAT--GTTT-G-TTAT----A---TGN-GTTTTAAAGATCGATAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGANGGAATAAACGAATTTGCANATAATTGT-GTTCTCGT-NTTNGAAACAACG--TAATCGGANGCATTTC-TAAGGTTGTANGGTGTATTNACTCCTACTGTT
gi|22286 : TAAGGTGACTACATCCGTTTTTCAAA--CGAGCGTAGA--GAACTGATAAAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TT--------------TAAAATACAT--GTTT-G-TTAT----A---TGT-GTCTTAAAAACCGATAAATT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCCTGACGAAATAAACGAATATGCAAATAGTTGT-GTTCTTGT-GTTTAAAACAACA--TAATCGGAAGCATTTCGTAA-GTTGTAAGGTGTATTAACTCCTACTGTT
gi|22287 : TGAGATGACTACATCCGTTTCTCAAA--CGAGCGTGGA--AAACTGATACAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TT--------------TAAAATACAT--GTTT-G-TTAT----A---TGA-GTTTTAAAAATCGATAAAGT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCATGACGGAATAAACGAATTTGCAAATAGTTTT-GTTCTTGT-TTTAAAAACAACT--TAATCGGAAGTATTTCGTAA-GTTGTAAGGTGTATTTACTCCTACTGTT
gi|22288 : TAAGGTGTCTACATCCGTTTCTCAAA--CGAGCATGGA--GAACTGATAA-ATTCGA----C---TACCAGTTAAA-----TAGTAT-AAT--GG-----TAC-TGTT--------TG--CGT------TT--------------TAAAGTACAT--GTTT-G-CTAT----A---TGT-GTTTTAAA-ACCGATAAAGT-CTCTGAGTTAAGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATAAGCATGACGAAATAAACGAATTTGCAAATAGTTGT-GTTCTTGT-GTTAAAAACATCA--TTATCGGAAGAATTTCGTAA-ATTGTAAGATGTATTTACTCCTACTGTT
gi|22289 : TAAGGTGACTGCATCCGTTTCTCAAA--CGAGCGTGGA--GAACTGATAAAATTCGA----C---TACTAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TT--------------TAAAATACAT--GTTT-G-TTAT----G---TGT-GGTTTACGAACAGATAACGT-CTCTGAGATAAAAATATTACTCG-GGAAGT--GTA-----CTCCAAATAGATACGCATGACAGAATAAACG-ATTTGCAAATAGTTGT-GTTCTTGT-GTTAAAAACAACA--TAATCGGAAGAATTTCGTAA-GTTGAAAGATGTATTTATTTCTACTGTT
gi|22290 : TAAGGTGACCATAGCCGTTTCCCAAA--CGAGCGTGGA--GAACTGATAAAATTTGA----C---TACCAGTAAGA-----TAATAC-GTT--GG-----TAC-CTTT--------TG--TGT------TT--------------TTAAATACAG--GTTT-A-TTAT----A---TGT-GTTTTGAAAAT----AAAGT-CTCTGGGTTACTAATG-TGCTCC-AGAAGT--GTA-----TTCAAGATAGATACACATGACGGAATAAACGAATTTGCAAATAGTTGT-GTTCTTGT-GTTAAAAACAATA--TAATCGGAAGAATTTCGTAA-GTTGTAAGGTGTATTTACTCCTACTGTT
gi|22291 : TAAGATGACTACATCCGTTTATCAAA--CGAGCGTGGA--AAACTGATAAAATTTGA----C---TACCAGCTAGA-----TAATAC-GAT--GG-----TAC-TATT--------TG--CGT------TT--------------TAAAATACAT--GTTT-G-TTAT----A---GGA-GTTTTAAACATTTATAAAGT-CTCTAAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCA
gi|22292 : TAAAGTGACTACATCCGTTTCTCAAA--CGAGGGTGGA--GAACTGATAACATTCG---------TT---GT-AGG-----TAATAT--ATTAAG-----CACTTATTTTTATTTATG--CATGTAAACTT--------------T-AAATACAT--GTTTCA-TTAT----G---CGT-GTt
gi|22293 : TGAAGTCACTACATTCATTTCGAAGT--CGAGCAAGGA--TAACGGA--AAATT-GA----CGTGTACCAACTAGA-----TAATAT-GAT--GGAATTTCAC-T-TC--------TG------------T--------------TGAAATGGG---ATTT-ACTTAT----A----AC-ATTTTTAAAATTACTAAGATATTCTA-------TATT-TCTTTC-AGAAGTAGGTAAAATGTTCCATAGTGAAACAGAAGATGGCACAAAAGA-TTTAGAGAAAATTTCAGTTCTTGT-ATTAACGATAACG--TAATCGTACGCATT
gi|22294 : AGGTTACTACAACCATTTCTTAAA--CGTGCATGAA--AAATAGATAATTTACGAGGGCC---TGCTAAAAAAACATAGTAATAT-GGT--GG--------------------------AT------TT----------------AAACAGAT--GCTT----CAT----AAGCTGGTGTTTGAATGAT-GATAGAGT-TTCAGAATTGCGTAAG-TATTCC-GGAAGA--CAA-----TTCCAAGAAGAAATACATGATGGAATAAAAGAATTTCTAAATAATTGA-GTTCTAGT-ATTT--AATAAAGAATAATTACTATTATTTT-TTAGATTATACGGTGTAGTTATTTCTACAGTTacacaaaccataattattaattgatcctactgt
gi|22295 : ACTACACCCGTTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAATA-----TAATACTGA---GG-----CAC-TGGT--------TGTACGT------T-----------------AAAGAAA----TTT-G-TGACTGAAG---TAC-GTTTAAAAGA-CATTTATGT-TTCTGAGCAACGTATG-TGTTGA-GGAAGG--GTG-----TTCCAATAGGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-ATTCTCATATTTCGAACTAAC----AATTGGATGCATTTC-TAAGGTTGTATGGTATATTAACACCTATTGTT
gi|22296 : ACTACACCCATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TGTACGT------TTAAGAAATTGGTGACTAAAATAC----GTTT-G-----------------------AAGGGCATTAATGA-TTCTGAGCAACGTATA-TGTAGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTGGAACTATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAACACCTATTGTT
gi|22297 : ACTACACCAATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TG--TAC------GT--------------TAAAGAAATT--GGTG-A-CTAA----AA--TAC-GTTTGAAGGA-CATTAATGA-TTCTGAGCAACGTATG-TG-TAG-GGGAAA--GGA-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTGGAACTATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAACACCTATTGTT
gi|22298 : ACTACACCGATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TG--TAA------GT--------------TAAAGAAATT--GGTG-A-CTAA----AG--TAC-GTTTGAAGGA-CATTAATGA-TTCTGAGCAACTCATG-TGTTGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTGGAACTATG--TAATCGGATGCATTTC-TAAGGTTGCATGGTATATTAACACCTATTGTT
gi|22299 : ACTACACCCATT--TCAAATGCGTGCGTGTATTAAA--GATAACTTTTTA----T---TTCAAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TGAACGT------T-----------------AAAGAAATTGGTGT-C-TAAA----G---TAC-GTTTGAAGGA-CATTTATGA-TTCTGAGCAACGTATG-TTTTGA-GGAAGG--GTG-----TTCCAATAAGAAAGACACGAGGGAATGAATGAATTTGCATATAATTGT-GTTCTCAT-ATTTGGAACTATG--TAATCGGACGCATTTC-TAAGGTTGTACGGTATATTAACACCTATTGTT
gi|22300 : TTAAA--CGTGCATGAA--AAGAAGATAAT-TT--A----C---TTTAAATAAAA---------AC-AA---GG-----TAT-T-TT--------TG--TGT------TC----------------AAACAAAT--GATT----CAT----AAACTGACGTTTGAATGAT-GATAGAGT-TTCAGAATTGCATAAG-TGCTTC-GGGAGA--TTA-----TTCCAAGAAGAAATACATGGTGGAATAAAAGAAT-----AATAATTGA-GTTCTAGT-ATTT--AATAAAGAATAATTATTATTGTTTC-TTAGATAATATGGTGCAGTTATTACTACAGTT
gi|22301 : -TTAC----A---TAC-GTTTAAAAGA-CATTTATGA-TTTTAAGCAACGTATA-TG-TCGAGGAAGG--GTG-----TTCCAATCAGAAATACACGAACGAATAAATGGGGTTTCATATAATTGT-GCTCTGAT-ATTTGGAACTATA--AAATCGAATGCATTTC-TAATGTTGTATGATATAT
Alignments
lowQualScore : 11 11 111111 1111111111111 1111111111111111 2222 1 1
lowQualScore : 1 2 33 1 0 88 33 44 77777777 1 3 66666 000000 777777 4444444444444 2222222222222222 3 33 77 2 5555 999 2 5555 1 0 1111 1 2 22 1 2 3 444 444 66666 22 1 0 4 2 1 2 2 777 33 9999 1 6 3 1 0 1 6666
lowQualScore : . . .. . . .. .. .. ........ . . ..... ...... ...... ............. ................ . .. .. . .... ... . .... . . .... . . .. . . . ... ... ..... .. . . . . . . . ... .. .... . . . . . . ....
lowQualScore : 6 1 77 0 5 33 55 66 33333333 0 6 77777 333333 555555 2222222222222 1111111111111111 3 77 88 5 3333 444 5 3333 0 3 7777 0 7 77 0 7 1 111 777 77777 00 4 8 1 2 0 9 2 111 11 4444 0 1 2 0 4 0 4444
consensus : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TT-AT----A---TG-C----GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
Reference ( family-886 ) : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATACAT--GTTTG-TT-AT----A---TG-C----GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
gi|22286 : TAAGGTGACTACATCCGTTTTTCAAA--CGAGCGTAGA--GAACTGATAAAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TT-AT----A---TG-T----GTCTTAAAAACCGATAAATT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCCTGACGAAATAAACGAATATGCAAATAGTTGT-GTTCTTGTGTTTAAAAC-AACA--TAATCGGAAGCATTTCGTAA-GTTGTAAGGTGTATTAAC---TCCTACTGTT
gi|22287 : TGAGATGACTACATCCGTTTCTCAAA--CGAGCGTGGA--AAACTGATACAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TT-AT----A---TG-A----GTTTTAAAAATCGATAAAGT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCATGACGGAATAAACGAATTTGCAAATAGTTTT-GTTCTTGTTTTAAAAAC-AACT--TAATCGGAAGTATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22288 : TAAGGTGTCTACATCCGTTTCTCAAA--CGAGCATGGA--GAACTGATAAA-TTCGA----C---TACCAGTTAAA-----TAGTAT-AAT--GG-----TAC-TGTT--------TG--CGT------TTTA-AAGTACAT--GTTTG-CT-AT----A---TG-T----GTTTTAAA-ACCGATAAAGT-CTCTGAGTTAAGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATAAGCATGACGAAATAAACGAATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-ATCA--TTATCGGAAGAATTTCGTAA-ATTGTAAGATGTATTTAC---TCCTACTGTT
gi|22289 : TAAGGTGACTGCATCCGTTTCTCAAA--CGAGCGTGGA--GAACTGATAAAATTCGA----C---TACTAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TT-AT----G---TG-T----GGTTTACGAACAGATAACGT-CTCTGAGATAAAAATATTACTCG-GGAAGT--GTA-----CTCCAAATAGATACGCATGACAGAATAAACG-ATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-AACA--TAATCGGAAGAATTTCGTAA-GTTGAAAGATGTATTTAT---TTCTACTGTT
gi|22290 : TAAGGTGACCATAGCCGTTTCCCAAA--CGAGCGTGGA--GAACTGATAAAATTTGA----C---TACCAGTAAGA-----TAATAC-GTT--GG-----TAC-CTTT--------TG--TGT------TTTT-AAATACAG--GTTTA-TT-AT----A---TG-T----GTTTTGAAAA----TAAAGT-CTCTGGGTTACTAATG-TGCTCC-AGAAGT--GTA-----TTCAAGATAGATACACATGACGGAATAAACGAATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-AATA--TAATCGGAAGAATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22291 : TAAGATGACTACATCCGTTTATCAAA--CGAGCGTGGA--AAACTGATAAAATTTGA----C---TACCAGCTAGA-----TAATAC-GAT--GG-----TAC-TATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TT-AT----A---GG-A----GTTTTAAACATTTATAAAGT-CTCTAAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCA
gi|22292 : TAAAGTGACTACATCCGTTTCTCAAA--CGAGGGTGGA--GAACTGATAACATTCG---------TT---GT-AGG-----TAATAT--ATTAAG-----CACTTATTTTTATTTATG--CATGTAAACTTT--AAATACAT--GTTTC-AT--T----A---TG-C----GTt
gi|22293 : TGAAGTCACTACATTCATTTCGAAGT--CGAGCAAGGA--TAACGGA--AAATT-GA----CGTGTACCAACTAGA-----TAATAT-GAT--GGAATTTCAC-T-TC--------TG------------TTG-AAATGGG---ATTTACTT-AT----A----A-C----ATTTTTAAAATTACTAAGATATTCTA-------TATT-TCTTTC-AGAAGTAGGTAAAATGTTCCATAGTGAAACAGAAGATGGCACAAAAGA-TTTAGAGAAAATTTCAGTTCTTGTATTAACGAT-AACG--TAATCGTACGCATTACACAA-ACCATAA--T-TATTAATTGATCCTACTGTgt
gi|22294 : AGGTTACTACAACCATTTCTTAAA--CGTGCATGAA--AAATAGATAATTTACGAGGGCC---TGCTAAAAAAACATAGTAATAT-GGT--GG--------------------------AT------TT---AAACAGAT--GCTT---C-AT----A---AG-CTGGTGTTTGAATGAT-GATAGAGT-TTCAGAATTGCGTAAG-TATTCC-GGAAGA--CAA-----TTCCAAGAAGAAATACATGATGGAATAAAAGAATTTCTAAATAATTGA-GTTCTAGTATTT--AAT-AAAGAATAATTACTATTATTTTTT-AGATTATACGGTGTAGTTAT---TTCTACAGTT
gi|22295 : ACTACACCCGTTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAATA-----TAATACTGA---GG-----CAC-TGGT--------TGTACGT------T----AAAGAAA----TTTG-TG-ACTGAAG---TA-C----GTTTAAAAGA-CATTTATGT-TTCTGAGCAACGTATG-TGTTGA-GGAAGG--GTG-----TTCCAATAGGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-ATTCTCATATTTCGAACTAAC----AATTGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22296 : ACTACACCCATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TGTACGT------TTAAGAAAT---T--GGTGA-CT-AA----AA--TA-C----GTTTGAAGGG-CATTAATGA-TTCTGAGCAACGTATA-TGTAGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22297 : ACTACACCAATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TG--TAC------GTTA-AAGAAATT--GGTGA-CTAAA----A---TA-C----GTTTGAAGGA-CATTAATGA-TTCTGAGCAACGTATG-TG-TAG-GGGAAA--GGA-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22298 : ACTACACCGATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TG--TAA------GTTA-AAGAAATT--GGTGA-CT-AA----AG--TA-C----GTTTGAAGGA-CATTAATGA-TTCTGAGCAACTCATG-TGTTGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGCATGGTATATTAAC---ACCTATTGTT
gi|22299 : ACTACACCCATTTC--AAATGCGTGCGTGTATTAAA--GATAACTTTTTA----T---TTCAAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TGAACGT------T----AAAGAAATTGGTGTC-TA-AA----G---TA-C----GTTTGAAGGA-CATTTATGA-TTCTGAGCAACGTATG-TTTTGA-GGAAGG--GTG-----TTCCAATAAGAAAGACACGAGGGAATGAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGACGCATTTC-TAAGGTTGTACGGTATATTAAC---ACCTATTGTT
gi|22300 : TTAAA--CGTGCATGAA--AAGAAGATAATTT---A----C---TTTAAATAAAA---------AC-AA---GG-----TAT-T-TT--------TG--TGT------TC---AAACAAAT--GATT---C-AT----AAACTGAC----GTTTGAATGAT-GATAGAGT-TTCAGAATTGCATAAG-TGCTTC-GGGAGA--TTA-----TTCCAAGAAGAAATACATGGTGGAATAAAAGAAT-----AATAATTGA-GTTCTAGTATTT--AAT-AAAGAATAATTATTATTGTTTCTT-AGATAATATGGTGCAGTTAT---TACTACAGTT
gi|22301 : -TT-AC----A---TA-C----GTTTAAAAGA-CATTTATGA-TTTTAAGCAACGTATA-TG-TCGAGGAAGG--GTG-----TTCCAATCAGAAATACACGAACGAATAAATGGGGTTTCATATAATTGT-GCTCTGATATTTGGAAC-TATA--AAATCGAATGCATTTC-TAATGTTGTATGATATAT
Alignments
lowQualScore : 11 11 111111 1111111111111 1111111111111111 2222 1 1
lowQualScore : 1 2 33 1 0 88 33 44 77777777 1 3 66666 000000 777777 4444444444444 2222222222222222 1 33 999 5555 999 2 5555 1 0 1111 1 2 22 1 2 3 444 444 66666 22 1 0 4 2 1 2 2 777 33 9999 1 6 3 1 0 1 6666
lowQualScore : . . .. . . .. .. .. ........ . . ..... ...... ...... ............. ................ . .. ... .... ... . .... . . .... . . .. . . . ... ... ..... .. . . . . . . . ... .. .... . . . . . . ....
lowQualScore : 6 1 77 0 5 33 55 66 33333333 0 6 77777 333333 555555 2222222222222 1111111111111111 0 77 333 3333 444 5 3333 0 3 7777 0 7 77 0 7 1 111 777 77777 00 4 8 1 2 0 9 2 111 11 4444 0 1 2 0 4 0 4444
consensus : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
Reference ( family-886 ) : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
gi|22286 : TAAGGTGACTACATCCGTTTTTCAAA--CGAGCGTAGA--GAACTGATAAAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---TG-T----GTCTTAAAAACCGATAAATT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCCTGACGAAATAAACGAATATGCAAATAGTTGT-GTTCTTGTGTTTAAAAC-AACA--TAATCGGAAGCATTTCGTAA-GTTGTAAGGTGTATTAAC---TCCTACTGTT
gi|22287 : TGAGATGACTACATCCGTTTCTCAAA--CGAGCGTGGA--AAACTGATACAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---TG-A----GTTTTAAAAATCGATAAAGT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCATGACGGAATAAACGAATTTGCAAATAGTTTT-GTTCTTGTTTTAAAAAC-AACT--TAATCGGAAGTATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22288 : TAAGGTGTCTACATCCGTTTCTCAAA--CGAGCATGGA--GAACTGATAAA-TTCGA----C---TACCAGTTAAA-----TAGTAT-AAT--GG-----TAC-TGTT--------TG--CGT------TTTA-AAGTACAT--GTTTG-CTAT----A---TG-T----GTTTTAAA-ACCGATAAAGT-CTCTGAGTTAAGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATAAGCATGACGAAATAAACGAATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-ATCA--TTATCGGAAGAATTTCGTAA-ATTGTAAGATGTATTTAC---TCCTACTGTT
gi|22289 : TAAGGTGACTGCATCCGTTTCTCAAA--CGAGCGTGGA--GAACTGATAAAATTCGA----C---TACTAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----G---TG-T----GGTTTACGAACAGATAACGT-CTCTGAGATAAAAATATTACTCG-GGAAGT--GTA-----CTCCAAATAGATACGCATGACAGAATAAACG-ATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-AACA--TAATCGGAAGAATTTCGTAA-GTTGAAAGATGTATTTAT---TTCTACTGTT
gi|22290 : TAAGGTGACCATAGCCGTTTCCCAAA--CGAGCGTGGA--GAACTGATAAAATTTGA----C---TACCAGTAAGA-----TAATAC-GTT--GG-----TAC-CTTT--------TG--TGT------TTTT-AAATACAG--GTTTA-TTAT----A---TG-T----GTTTTGAAAA----TAAAGT-CTCTGGGTTACTAATG-TGCTCC-AGAAGT--GTA-----TTCAAGATAGATACACATGACGGAATAAACGAATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-AATA--TAATCGGAAGAATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22291 : TAAGATGACTACATCCGTTTATCAAA--CGAGCGTGGA--AAACTGATAAAATTTGA----C---TACCAGCTAGA-----TAATAC-GAT--GG-----TAC-TATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---GG-A----GTTTTAAACATTTATAAAGT-CTCTAAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCA
gi|22292 : TAAAGTGACTACATCCGTTTCTCAAA--CGAGGGTGGA--GAACTGATAACATTCG---------TT---GT-AGG-----TAATAT--ATTAAG-----CACTTATTTTTATTTATG--CATGTAAACTTT--AAATACAT--GTTTC-AT-T----A---TG-C----GTt
gi|22293 : TGAAGTCACTACATTCATTTCGAAGT--CGAGCAAGGA--TAACGGA--AAATT-GA----CGTGTACCAACTAGA-----TAATAT-GAT--GGAATTTCAC-T-TC--------TG------------TTG-AAATGGG---ATTTACTTAT----A----A-C----ATTTTTAAAATTACTAAGATATTCTA-------TATT-TCTTTC-AGAAGTAGGTAAAATGTTCCATAGTGAAACAGAAGATGGCACAAAAGA-TTTAGAGAAAATTTCAGTTCTTGTATTAACGAT-AACG--TAATCGTACGCATTACACAA-ACCATAA--T-TATTAATTGATCCTACTGTgt
gi|22294 : AGGTTACTACAACCATTTCTTAAA--CGTGCATGAA--AAATAGATAATTTACGAGGGCC---TGCTAAAAAAACATAGTAATAT-GGT--GG--------------------------AT------TT---AAACAGAT--GCTT---CAT----A---AG-CTGGTGTTTGAATGAT-GATAGAGT-TTCAGAATTGCGTAAG-TATTCC-GGAAGA--CAA-----TTCCAAGAAGAAATACATGATGGAATAAAAGAATTTCTAAATAATTGA-GTTCTAGTATTT--AAT-AAAGAATAATTACTATTATTTTTT-AGATTATACGGTGTAGTTAT---TTCTACAGTT
gi|22295 : ACTACACCCGTTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAATA-----TAATACTGA---GG-----CAC-TGGT--------TGTACGT------T----AAAGAAA----TTTG-TGACTGAAG---TA-C----GTTTAAAAGA-CATTTATGT-TTCTGAGCAACGTATG-TGTTGA-GGAAGG--GTG-----TTCCAATAGGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-ATTCTCATATTTCGAACTAAC----AATTGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22296 : ACTACACCCATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TGTACGT------TTAAGAAATTGGT--GACTA---AA----A---TA-C----GTTTGAAGGG-CATTAATGA-TTCTGAGCAACGTATA-TGTAGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22297 : ACTACACCAATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TG--TAC------GTTA-AAGAAATT--GGTGA-CTAA----AA--TA-C----GTTTGAAGGA-CATTAATGA-TTCTGAGCAACGTATG-TG-TAG-GGGAAA--GGA-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22298 : ACTACACCGATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TG--TAA------GTTA-AAGAAATT--GGTGA-CTAA----AG--TA-C----GTTTGAAGGA-CATTAATGA-TTCTGAGCAACTCATG-TGTTGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGCATGGTATATTAAC---ACCTATTGTT
gi|22299 : ACTACACCCATTTC--AAATGCGTGCGTGTATTAAA--GATAACTTTTTA----T---TTCAAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TGAACGT------T----AAAGAAATTGGTGTC-TAAA----G---TA-C----GTTTGAAGGA-CATTTATGA-TTCTGAGCAACGTATG-TTTTGA-GGAAGG--GTG-----TTCCAATAAGAAAGACACGAGGGAATGAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGACGCATTTC-TAAGGTTGTACGGTATATTAAC---ACCTATTGTT
gi|22300 : TTAAA--CGTGCATGAA--AAGAAGATAATTT---A----C---TTTAAATAAAA---------AC-AA---GG-----TAT-T-TT--------TG--TGT------TC---AAACAAAT--GATT---CAT----AAACTGAC----GTTTGAATGAT-GATAGAGT-TTCAGAATTGCATAAG-TGCTTC-GGGAGA--TTA-----TTCCAAGAAGAAATACATGGTGGAATAAAAGAAT-----AATAATTGA-GTTCTAGTATTT--AAT-AAAGAATAATTATTATTGTTTCTT-AGATAATATGGTGCAGTTAT---TACTACAGTT
gi|22301 : -TTAC----A---TA-C----GTTTAAAAGA-CATTTATGA-TTTTAAGCAACGTATA-TG-TCGAGGAAGG--GTG-----TTCCAATCAGAAATACACGAACGAATAAATGGGGTTTCATATAATTGT-GCTCTGATATTTGGAAC-TATA--AAATCGAATGCATTTC-TAATGTTGTATGATATAT
Alignments
lowQualScore : 11 11 111111 1111111111111 1111111111111111 2222 1 1
lowQualScore : 1 2 33 1 0 88 33 44 77777777 1 3 66666 000000 777777 4444444444444 2222222222222222 1 33 999 5555 999 2 5555 1 0 1111 1 2 22 1 2 3 444 444 66666 22 1 0 4 2 1 2 2 777 33 9999 1 6 3 1 0 1 6666
lowQualScore : . . .. . . .. .. .. ........ . . ..... ...... ...... ............. ................ . .. ... .... ... . .... . . .... . . .. . . . ... ... ..... .. . . . . . . . ... .. .... . . . . . . ....
lowQualScore : 6 1 77 0 5 33 55 66 33333333 0 6 77777 333333 555555 2222222222222 1111111111111111 0 77 333 3333 444 5 3333 0 3 7777 0 7 77 0 7 1 111 777 77777 00 4 8 1 2 0 9 2 111 11 4444 0 1 2 0 4 0 4444
consensus : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
Reference ( family-886 ) : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
gi|22286 : TAAGGTGACTACATCCGTTTTTCAAA--CGAGCGTAGA--GAACTGATAAAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---TG-T----GTCTTAAAAACCGATAAATT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCCTGACGAAATAAACGAATATGCAAATAGTTGT-GTTCTTGTGTTTAAAAC-AACA--TAATCGGAAGCATTTCGTAA-GTTGTAAGGTGTATTAAC---TCCTACTGTT
gi|22287 : TGAGATGACTACATCCGTTTCTCAAA--CGAGCGTGGA--AAACTGATACAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---TG-A----GTTTTAAAAATCGATAAAGT-CTCTGAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCATGACGGAATAAACGAATTTGCAAATAGTTTT-GTTCTTGTTTTAAAAAC-AACT--TAATCGGAAGTATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22288 : TAAGGTGTCTACATCCGTTTCTCAAA--CGAGCATGGA--GAACTGATAAA-TTCGA----C---TACCAGTTAAA-----TAGTAT-AAT--GG-----TAC-TGTT--------TG--CGT------TTTA-AAGTACAT--GTTTG-CTAT----A---TG-T----GTTTTAAA-ACCGATAAAGT-CTCTGAGTTAAGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATAAGCATGACGAAATAAACGAATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-ATCA--TTATCGGAAGAATTTCGTAA-ATTGTAAGATGTATTTAC---TCCTACTGTT
gi|22289 : TAAGGTGACTGCATCCGTTTCTCAAA--CGAGCGTGGA--GAACTGATAAAATTCGA----C---TACTAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----G---TG-T----GGTTTACGAACAGATAACGT-CTCTGAGATAAAAATATTACTCG-GGAAGT--GTA-----CTCCAAATAGATACGCATGACAGAATAAACG-ATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-AACA--TAATCGGAAGAATTTCGTAA-GTTGAAAGATGTATTTAT---TTCTACTGTT
gi|22290 : TAAGGTGACCATAGCCGTTTCCCAAA--CGAGCGTGGA--GAACTGATAAAATTTGA----C---TACCAGTAAGA-----TAATAC-GTT--GG-----TAC-CTTT--------TG--TGT------TTTT-AAATACAG--GTTTA-TTAT----A---TG-T----GTTTTGAAAA----TAAAGT-CTCTGGGTTACTAATG-TGCTCC-AGAAGT--GTA-----TTCAAGATAGATACACATGACGGAATAAACGAATTTGCAAATAGTTGT-GTTCTTGTGTTAAAAAC-AATA--TAATCGGAAGAATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22291 : TAAGATGACTACATCCGTTTATCAAA--CGAGCGTGGA--AAACTGATAAAATTTGA----C---TACCAGCTAGA-----TAATAC-GAT--GG-----TAC-TATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---GG-A----GTTTTAAACATTTATAAAGT-CTCTAAGTTACGAATG-TACTCG-GGAAGT--GTA-----TTCCAAATAGATACGCA
gi|22292 : TAAAGTGACTACATCCGTTTCTCAAA--CGAGGGTGGA--GAACTGATAACATTCG---------TT---GT-AGG-----TAATAT--ATTAAG-----CACTTATTTTTATTTATG--CATGTAAACTTT--AAATACAT--GTTTC-AT-T----A---TG-C----GTt
gi|22293 : TGAAGTCACTACATTCATTTCGAAGT--CGAGCAAGGA--TAACGGA--AAATT-GA----CGTGTACCAACTAGA-----TAATAT-GAT--GGAATTTCAC-T-TC--------TG------------TTG-AAATGGG---ATTTACTTAT----A----A-C----ATTTTTAAAATTACTAAGATATTCTA-------TATT-TCTTTC-AGAAGTAGGTAAAATGTTCCATAGTGAAACAGAAGATGGCACAAAAGA-TTTAGAGAAAATTTCAGTTCTTGTATTAACGAT-AACG--TAATCGTACGCATTACACAA-ACCATAA--T-TATTAATTGATCCTACTGTgt
gi|22294 : AGGTTACTACAACCATTTCTTAAA--CGTGCATGAA--AAATAGATAATTTACGAGGGCC---TGCTAAAAAAACATAGTAATAT-GGT--GG--------------------------AT------TT---AAACAGAT--GCTT---CAT----A---AG-CTGGTGTTTGAATGAT-GATAGAGT-TTCAGAATTGCGTAAG-TATTCC-GGAAGA--CAA-----TTCCAAGAAGAAATACATGATGGAATAAAAGAATTTCTAAATAATTGA-GTTCTAGTATTT--AAT-AAAGAATAATTACTATTATTTTTT-AGATTATACGGTGTAGTTAT---TTCTACAGTT
gi|22295 : ACTACACCCGTTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAATA-----TAATACTGA---GG-----CAC-TGGT--------TGTACGT------T----AAAGAAA----TTTG-TGACTGAAG---TA-C----GTTTAAAAGA-CATTTATGT-TTCTGAGCAACGTATG-TGTTGA-GGAAGG--GTG-----TTCCAATAGGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-ATTCTCATATTTCGAACTAAC----AATTGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22296 : ACTACACCCATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TGTACGT------TTAAGAAATTGGT--GACTA---AA----A---TA-C----GTTTGAAGGG-CATTAATGA-TTCTGAGCAACGTATA-TGTAGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22297 : ACTACACCAATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TG--TAC------GTTA-AAGAAATT--GGTGA-CTAA----AA--TA-C----GTTTGAAGGA-CATTAATGA-TTCTGAGCAACGTATG-TG-TAG-GGGAAA--GGA-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22298 : ACTACACCGATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TG--TAA------GTTA-AAGAAATT--GGTGA-CTAA----AG--TA-C----GTTTGAAGGA-CATTAATGA-TTCTGAGCAACTCATG-TGTTGA-GGAAGG--GTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGCATGGTATATTAAC---ACCTATTGTT
gi|22299 : ACTACACCCATTTC--AAATGCGTGCGTGTATTAAA--GATAACTTTTTA----T---TTCAAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TGAACGT------T----AAAGAAATTGGTGTC-TAAA----G---TA-C----GTTTGAAGGA-CATTTATGA-TTCTGAGCAACGTATG-TTTTGA-GGAAGG--GTG-----TTCCAATAAGAAAGACACGAGGGAATGAATGAATTTGCATATAATTGT-GTTCTCATATTTGGAAC-TATG--TAATCGGACGCATTTC-TAAGGTTGTACGGTATATTAAC---ACCTATTGTT
gi|22300 : TTAAA--CGTGCATGAA--AAGAAGATAATTT---A----C---TTTAAATAAAA---------AC-AA---GG-----TAT-T-TT--------TG--TGT------TC---AAACAAAT--GATT---CAT----AAACTGAC----GTTTGAATGAT-GATAGAGT-TTCAGAATTGCATAAG-TGCTTC-GGGAGA--TTA-----TTCCAAGAAGAAATACATGGTGGAATAAAAGAAT-----AATAATTGA-GTTCTAGTATTT--AAT-AAAGAATAATTATTATTGTTTCTT-AGATAATATGGTGCAGTTAT---TACTACAGTT
gi|22301 : -TTAC----A---TA-C----GTTTAAAAGA-CATTTATGA-TTTTAAGCAACGTATA-TG-TCGAGGAAGG--GTG-----TTCCAATCAGAAATACACGAACGAATAAATGGGGTTTCATATAATTGT-GCTCTGATATTTGGAAC-TATA--AAATCGAATGCATTTC-TAATGTTGTATGATATAT
blockSeqs : T C TG A TT CT AA GGGCC A T CATAG ATTA AATTTC TTATTTTTATTTA CATGTAAACTTT C TG ACT TGAA AAC A TGGT T TCGA A A TT A T C CGA TAG AAATG AT T C C A A T AAA TA AGAA A G G A T TGAT
blockSeqs : T C . A TT CT AA CGTG A T . GAT T CATT TACGTTTAAG C . GT . A . . T CCGA A . TT A . C CG T . AT T C C A . T AAA A AGAA A G G A T T
blockSeqs : T C . A TT CT AA C A T . AAT T TGTT CGTTTTA C . GC . G . . T CAGA C . AT A . C CG T . AT T C C A . T AAA A CT A G G A T T
blockSeqs : G C . A TT CT AA C A A . GAT T CATT CGTTTTA C . GT . . . . T TTTA A . TT A . C CG T . AT T C C A . T AAA A CA A G G A T T
blockSeqs : T C . A TT CT CA C A T . GTT T CTTT CGTTTTA C . AT . . . . T TTAC A . TT A . C CC T . AT T T A G . T AAC A CA C A G A A T
blockSeqs : T C . A . CT AA C T T . GAT T TATT TGTTTTT C . GT . . . . T TGA G . TT T . T CG T . AG A T A A . A TCG A TA A T G C T T
blockSeqs : T A . A . CG TT C A A . GAT C TGGT CGTTTTA G . CA . . . . G CAT A . CA T . T TC A . GA A G T T . C TGG A CG T T G T A A
blockSeqs : A T . T . TA CT T G A . GGT C TGGT TACGTTA G . GT . . . . A CAT T . CA T . T CC G . TA A G T T . C TGG T TG T . T T A A
blockSeqs : C A . T . AA CT T T A . TGA C TGGT TAAGTTA A . AC . . . . G CAT T . CA T . T GA G . TA A G T T . C TGG T TG T . . T A A
blockSeqs : C A . T . . CT T T A . TGT C TGGT TACGTT G . AC . . . . G CAT T . CA T . T GA A . TA A G T T . C TGG T TG T . . T A A
blockSeqs : C A . T . . CT T T A . TGT C TGGT AACGTT A . CT . . . . G CAT T . CA C . T AG G . TA A G T T . C TGG T TG C . . C A A
blockSeqs : C A . T . . CT T T A . TGA C TTC TGTTC A . A . . . . G TGA T . TT T . C GA G . TA A T A A . A T A TA A . . T T T
blockSeqs : C T . T . . TT C T A . TGA T TTT ATTT A . . . . . . G CAT A . CA T . . GA A . GA A A T T . G T T C T . . T
blockSeqs : . . T . . A . T . . AA . . TTG A . . . . . . A . T . . T . . TC G . TC A
blockSeqs : . . . .
blockSeqCons : CGT*
originalCons : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAAGATCGNTAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
finalCons : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAAGACGT-TAANGT-TTCTGAGCNACGNATG-TGCTCG-GGAAGN--GTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT-GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
Alignments
lowQualScore : 11 11 111111 1111111111111 1111111111111111 111111 1 1
lowQualScore : 1 2 33 1 0 88 33 44 77777777 1 3 66666 000000 777777 4444444444444 2222222222222222 1 33 0 999 5555 999 2 5555 3 1 333333 1 11 444 1 2 3 444 444 66666 22 1 0 4 2 1 33 2 777 33 9999 1 6 3 1 0 1 6666
lowQualScore : . . .. . . .. .. .. ........ . . ..... ...... ...... ............. ................ . .. . ... .... ... . .... . . ...... . .. ... . . . ... ... ..... .. . . . . . .. . ... .. .... . . . . . . ....
lowQualScore : 6 1 77 0 5 33 55 66 33333333 0 6 77777 333333 555555 2222222222222 1111111111111111 0 77 3 333 3333 444 5 3333 6 1 333333 0 88 777 0 7 1 111 777 77777 00 4 8 1 2 0 99 2 111 11 4444 0 1 2 0 4 0 4444
consensus : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAGGA-C-GN-TAANGTTTCTGAGCTA---CGNATG-TGCTCG-GGAAG--NGTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT--GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
Reference ( family-886 ) : TAAGGTGACTACACCCGTTTCTCAAA--CGNGCGTGGA--AAACTGATAANNTTCGA----C---TNCCAGTNAGA-----TAATAC-GAT--GG-----CAC-CGTT--------TG--CGT------TTTA-AAATANAT--GTTTG-TTAT----A---TG-C----GTTTNAAAGA-C-GT-TAANGTTTCTGAGCNA---CGNATG-TGCTCG-GGAAG--NGTA-----TTCCAANNAGAAACACACGACGGAATAAACGAATTTGCANATAATTGT--GTTCTCGTATTTGGAAC-AACG--TAATCGGANGCATTTCGTAAGGTTGTANGGTGTATTNAC---TCCTACTGTT
gi|22286 : TAAGGTGACTACATCCGTTTTTCAAA--CGAGCGTAGA--GAACTGATAAAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---TG-T----GTCTTAAAAACC-GA-TAAATTCTCTGAGTTA---CGAATG-TACTCG-GGAAG--TGTA-----TTCCAAATAGATACGCCTGACGAAATAAACGAATATGCAAATAGTTGT--GTTCTTGTGTTTAAAAC-AACA--TAATCGGAAGCATTTCGTAA-GTTGTAAGGTGTATTAAC---TCCTACTGTT
gi|22287 : TGAGATGACTACATCCGTTTCTCAAA--CGAGCGTGGA--AAACTGATACAATTCGA----C---TACCAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---TG-A----GTTTTAAAAATC-GA-TAAAGTCTCTGAGTTA---CGAATG-TACTCG-GGAAG--TGTA-----TTCCAAATAGATACGCATGACGGAATAAACGAATTTGCAAATAGTTTT--GTTCTTGTTTTAAAAAC-AACT--TAATCGGAAGTATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22288 : TAAGGTGTCTACATCCGTTTCTCAAA--CGAGCATGGA--GAACTGATAAA-TTCGA----C---TACCAGTTAAA-----TAGTAT-AAT--GG-----TAC-TGTT--------TG--CGT------TTTA-AAGTACAT--GTTTG-CTAT----A---TG-T----GTTTTAAAAC-C-GA-TAAAGTCTCTGAGTTA---AGAATG-TACTCG-GGAAG--TGTA-----TTCCAAATAGATAAGCATGACGAAATAAACGAATTTGCAAATAGTTGT--GTTCTTGTGTTAAAAAC-ATCA--TTATCGGAAGAATTTCGTAA-ATTGTAAGATGTATTTAC---TCCTACTGTT
gi|22289 : TAAGGTGACTGCATCCGTTTCTCAAA--CGAGCGTGGA--GAACTGATAAAATTCGA----C---TACTAGTTAGA-----TAATAC-GAT--GG-----TAC-CATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----G---TG-T----GGTTTACGAA-CAGA-TAACGTCTCTGAGATA---AAAATATTACTCG-GGAAG--TGTA-----CTCCAAATAGATACGCATGACAGAATAAACG-ATTTGCAAATAGTTGT--GTTCTTGTGTTAAAAAC-AACA--TAATCGGAAGAATTTCGTAA-GTTGAAAGATGTATTTAT---TTCTACTGTT
gi|22290 : TAAGGTGACCATAGCCGTTTCCCAAA--CGAGCGTGGA--GAACTGATAAAATTTGA----C---TACCAGTAAGA-----TAATAC-GTT--GG-----TAC-CTTT--------TG--TGT------TTTT-AAATACAG--GTTTA-TTAT----A---TG-T----GTTTTGAAAA------TAAAGTCTCTGGGTTA---CTAATG-TGCTCC-AGAAG--TGTA-----TTCAAGATAGATACACATGACGGAATAAACGAATTTGCAAATAGTTGT--GTTCTTGTGTTAAAAAC-AATA--TAATCGGAAGAATTTCGTAA-GTTGTAAGGTGTATTTAC---TCCTACTGTT
gi|22291 : TAAGATGACTACATCCGTTTATCAAA--CGAGCGTGGA--AAACTGATAAAATTTGA----C---TACCAGCTAGA-----TAATAC-GAT--GG-----TAC-TATT--------TG--CGT------TTTA-AAATACAT--GTTTG-TTAT----A---GG-A----GTTTTAAACA-T-TTATAAAGTCTCTAAGTTA---CGAATG-TACTCG-GGAAG--TGTA-----TTCCAAATAGATACGCA
gi|22292 : TAAAGTGACTACATCCGTTTCTCAAA--CGAGGGTGGA--GAACTGATAACATTCG---------TT---GT-AGG-----TAATAT--ATTAAG-----CACTTATTTTTATTTATG--CATGTAAACTTT--AAATACAT--GTTTC-AT-T----A---TG-C----GTt
gi|22293 : TGAAGTCACTACATTCATTTCGAAGT--CGAGCAAGGA--TAACGGA--AAATT-GA----CGTGTACCAACTAGA-----TAATAT-GAT--GGAATTTCAC-T-TC--------TG------------TTG-AAATGGG---ATTTACTTAT----A----A-C----ATTT----------T-TAAAATTACTAAGATATTCTATATT-TCTTTC-AGAAGTAGGTAAAATGTTCCATAGTGAAACAGAAGATGGCACAAAAG-ATTTAGAGAAAATT-TCAGTTCTTGTATTAACGAT-AACG--TAATCGTACGCATTACACAA-ACCATAA--T-TATTAATTGATCCTACTGTgt
gi|22294 : AGGTTACTACAACCATTTCTTAAA--CGTGCATGAA--AAATAGATAATTTACGAGGGCC---TGCTAAAAAAACATAGTAATAT-GGT--GG--------------------------AT------TT---AAACAGAT--GCTT---CAT----A---AG-CTGGTGTTTGAATGA-T-GA-TAGAGTTTCAGAATTG---CGTAAG-TATTCC-GGAAG--ACAA-----TTCCAAGAAGAAATACATGATGGAATAAAAGAATTTCTAAATAATTGA--GTTCTAGTATTT--AAT-AAAGAATAATTACTATTATTTTTT-AGATTATACGGTGTAGTTAT---TTCTACAGTT
gi|22295 : ACTACACCCGTTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAATA-----TAATACTGA---GG-----CAC-TGGT--------TGTACGT------T----AAAGAAAT----TTG-TGACTGAAG---TA-C----GTTTAAAAGA-C-AT-TTATGTTTCTGAGCAA---CGTATG-TGTTGA-GGAAG--GGTG-----TTCCAATAGGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT--ATTCTCATATTTCGAACTAAC----AATTGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22296 : ACTACACCCATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TGTACGT------TTAAGAAATTGGT--GACTA---AA----A---TA-C----GTTTGAAGGG-C-AT-TAATGATTCTGAGCAA---CGTATA-TGTAGA-GGAAG--GGTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT--GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22297 : ACTACACCAATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATAC-TGT--GG-----CAC-TGGT--------TG--TAC------GTTA-AAGAAATT--GGTGA-CTAA----AA--TA-C----GTTTGAAGGA-C-AT-TAATGATTCTGAGCAA---CGTATG-TG-TAG-GGGAA--AGGA-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT--GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGTATGGTATATTAAC---ACCTATTGTT
gi|22298 : ACTACACCGATTTCTAATG--CGTGCGTGTATTAAA--GATAACTTTCTA----T---TTCCAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TG--TAA------GTTA-AAGAAATT--GGTGA-CTAA----AG--TA-C----GTTTGAAGGA-C-AT-TAATGATTCTGAGCAA---CTCATG-TGTTGA-GGAAG--GGTG-----TTCCAATAAGAAATACACGAGGGAATAAATGAATTTGCATATAATTGT--GTTCTCATATTTGGAAC-TATG--TAATCGGATGCATTTC-TAAGGTTGCATGGTATATTAAC---ACCTATTGTT
gi|22299 : ACTACACCCATTTC--AAATGCGTGCGTGTATTAAA--GATAACTTTTTA----T---TTCAAGTAAGA-----TAATACTGA---GG-----CAC-TGGT--------TGAACGT------T----AAAGAAATTGGTGTC-TAAA----G---TA-C----GTTTGAAGGA-C-AT-TTATGATTCTGAGCAA---CGTATG-TTTTGA-GGAAG--GGTG-----TTCCAATAAGAAAGACACGAGGGAATGAATGAATTTGCATATAATTGT--GTTCTCATATTTGGAAC-TATG--TAATCGGACGCATTTC-TAAGGTTGTACGGTATATTAAC---ACCTATTGTT
gi|22300 : TTAAA--CGTGCATGAA--AAGAAGATAATTT---A----C---TTTAAATAAAA---------AC-AA---GG-----TAT-T-TT--------TG--TGT------TC---AAACAAAT--GATT---CAT----AAACTGAC----GTTTGAATGA-T-GA-TAGAGTTTCAGAATTG---CATAAG-TGCTTC-GGGAG--ATTA-----TTCCAAGAAGAAATACATGGTGGAATAAAAGAAT-----AATAATTGA--GTTCTAGTATTT--AAT-AAAGAATAATTATTATTGTTTCTT-AGATAATATGGTGCAGTTAT---TACTACAGTT
gi|22301 : -TTAC----A---TA-C----GTTTAAAAGA-C-AT-TTATGATTTTAAGCAA---CGTATA-TG-TCGAGGAAG--GGTG-----TTCCAATCAGAAATACACGAACGAATAAATGGGGTTTCATATAATTGT--GCTCTGATATTTGGAAC-TATA--AAATCGAATGCATTTC-TAATGTTGTATGATATAT