lowQualScore : 111 1 222222 11111 11111 333333333333 1111 1 333333333 111 1 1 111111111 111 1111 1111 11111 2222222222 11 11111 4444444444444 11111111 1111 2222 22 44444444444444444 11 111111 1
lowQualScore : 0 000 3 6666 6 0 999999 88888 88888 2 7777 111111111111 3333 6 777 0 44 1 0 4 2 3 1 1 2 222222222 33 9 666 1 2 0 3 44 222222222 6 3 2 2 000 3 11 2222 2 44 7777 77 44 66666 1 0 777 88 4 6 33 6 0 2 3 8888888 1 6 2222222222 2 44 44 3 1 0 0 1 3 33333 44 4 0 7777 1 7777 7777777777777 3 22222222 3 999999 8888 3 1111 3 555 44 3 555 00 33 33 888 55 2 33333333333333333 1 11 1 888888 88 7 1 0 6 5 4
lowQualScore : . ... . .... . . ...... ..... ..... . .... ............ .... . ... . .. . . . . . . . . ......... .. . ... . . . . .. ......... . . . . ... . .. .... . .. .... .. .. ..... . . ... .. . . .. . . . . ....... . . .......... . .. .. . . . . . . ..... .. . . .... . .... ............. . ........ . ...... .... . .... . ... .. . ... .. .. .. ... .. . ................. . .. . ...... .. . . . . . .
lowQualScore : 3 888 9 5555 2 5 222222 11111 33333 2 1111 666666666666 4444 7 999 4 66 7 4 2 8 3 4 6 7 222222222 66 2 222 2 5 2 5 22 666666666 8 0 2 2 888 1 22 1111 4 22 3333 33 11 99999 3 2 888 55 2 2 22 2 7 5 1 5555555 6 0 4444444444 9 55 44 1 7 4 9 0 1 11111 22 8 1 1111 3 1111 4444444444444 8 11111111 3 666666 7777 3 2222 3 333 22 3 888 66 77 00 888 00 3 99999999999999999 9 77 7 444444 77 6 7 9 6 4 8
consensus : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAACNA----ACTGGAACGA-A-CTATCT--AACGACGACGTAAACGTGTATGCT----ACCAA---T--GTC---TGC-TAATAAAATT-AA-TGAACTTT--CAAANANATGTATTCCAAATAAAATCGTTAAAATT-AAACCGCATGAACCTCCGTGGATANCCACT--GAGTT-AAA-AAAG---AATATTAGGGTCCGNAAAA--GAC---T-NTNTAAAAAAGCAAAGAGATCTAAC---GA-AATATA-CC-ACTGGAACAGATTT--A----AAA--AA-AAC-----GTAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAG-CAGTCATACTACGANAA-TTTAGCANGT---AAACTNAATTC-T----A--CATC-TCTC-TCTCCCAAAGAC-TG-GTGGAAAATATTAAAGTCGTTTATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTGT----TTCCGATTTTGAGC--TA--AAAGCCAACTT--------AC-TA------AATTN-ATTT-TTCC----A-ATCTCAG-TCA-A---TCTTAAATGACGAT-AACATTGAACCACC--NATTTTGATACCNAG-----AC----AA----AACATCCCAG-TTTATTAGATCTTGCTTTACTACCCANCGATGTATGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
Reference ( gi|138123 ) : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCAAACTT----ACTGGAACGA-A-TTATCT--AGCGATGATGTAGACGTGTATGCT----ACCAA---T--GT----TGC-TAATAAAATT-AA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATTAAAATT-AAACCGCATGAACCTCCGTGGATATCCACA--GAGTT-AAA-AAAG---AATATTCGGGCCCGCAAAA--GAC---T-TTTTAAGAAGGCAAAGAGATCTAAC---GA-AATATA-CC-ACTGGAACAGATTT--A----AAA--AA-AAC-----GTAATGAGGTCGTTCA--ACTTGTACGCCA-AGC-AAAG-CAGTCATACTATGATAA-TTTAGCAAGT---AAACTTAGTTC-T----G--TATC-TCTC-TCTCCCAAAGAA-TG-GTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGGGC--TA--AAAGCCAACTT--------AC-TA------AATTC-ATTT-TTTC----A-ATCTCAG-TCA-A---TCTGAAATGACGAT-AACATTGAACCACC--TATTTTGATACCTAG-----AC----AA----AACATCCCAGTTTTACTAGATCTTGCTTTACTACTCATCGATGTGTGCAGTATTCTTAAGTCGTTTCCAGTTGGAAAAGCCTC
gi|138124 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCGAACCA----ACTGGAACGA-A-CTATCT--AGCGATGATGTAGACGTGTATGCT----ACCAA---T--GT----TGC-TAATACAATT-AA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATTAAAGTT-AAACCGCATGAACCTCCGTGGATATCCT----GAGTT-AAA-AAAG---AACATTAGGGCCCGTAAAA--GAC---T-TTTTAAGAAGGCAAAGAGATCTAAC---GA-AATATA-CC-ACTGGAACAGATTA--A----AAAA-AA-AAC-----GTAATGAGGTCATCCA--ACTTATACGCCA-AGC-AAAG-GAGTCATACTATGATAA-TTTATCAATT---AAACTTAATTC-T----G--TATC-TCTT-TCTCCCAAAGAC-TG-GTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGATAATGGAAC----TATTAT----ATCCGATTTTGAGC--TA--AAAGCCAACTT--------AC-TA------AATTC-ATTT-TTCC----A-ATCTCAG-TCA-A---TCTTAAATGACGAT-AACATTGAACCACC--TATTTTGTTACGGAG-----AC----AA----AACATCCCAGTTTTATCAGATCTTGCTTTACTACCCATCGATGTGTGCAGTATTCTTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138126 : AGAGACATATTTGGATATAT---GAACTTGATGACTATGCTCTTTTA----AAAAATAAAAT-TGTTTAAACTA----ACTGGAACGA-T-CTATCT--AACGATGATGTAGACGTGTATGCT----ACCAA---T--GT----TGC-TAATAAAATT-AA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATAAAAATT-AAACCGCATGAACCTCCGTGGATATCCACG--GAGTA-AAA-AAAG---AATATTAGGGCCCGTAAAA--GAC---C-TTTAAAAAAGGCAAAGAGATCTAAC---GA-AATATA-CC-ACTGGAACAGATTT--A----AAA--AA-AACGAAATGTAATGAGGTCGTCTA--ACTTATACGCCA-AGC-AAAG-CAGTCATACTATGATAA-TTTAGCAAGT---AAACATAATTC-T----A--CATC-CCTC-TCTCCCATCGAC-TG-GTGGAACATATTAAAGTCGCTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCAACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGT--TA--AAAGCCAACTT--------AC-TA------AATTC-ATTT-TTCC----A-ATCTCAG-TCA-AACCTCAGAAATAATAAT-AATA
gi|138125 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAC-TATGCAAACGA----ACTGGAACGA-A-CTATCT--AACGATGATGCAGACGTGTATGCT----ACCAA---T--GT----TGC-TAAAAAAATT-GA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATTAAAATT-AAACCGCATGAACCTCCGATGATTTCCACT--TATTA-AAA-AAAG---AATATTAAGGCCCGTAAAA--GGC-------------------AGAGATCTAAA---GT-AATATA-CC-ACTGACACAGATT--------AAA--AA-AAT-----GTAATGAGGTCGTCCA--ACTTCTACGCCA-AGC-GAAG-CAGTCATACTATGATAA-TTTAGCAAGT---AAACTTAATTC-T----G--CATC-TCTC-TCTCCCAAAGAC-TG-GTGGAAAATATTAAAGTCGTTCATCTCTTCAGATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTTTGAATATGCGT--TA--AAATTCAACTT--------AC-TA------AATTC-ATTT-TTCC----A-ATTTTGA-TCA-A---TCTTAAATGACGAT-AACATTGAACCACC--TATTTTGATACCT-----------------------T----GCTTTTCTA---C--------CCACCTAT--ATG--TGCAGTATTCGTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138127 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAACAA----ACTGGAATAATG-TTATC---ACTGACGACATAAATGTGTATGCT----AGCAACT-T--ATC---TGC-----AAAATTAAA-GGAAATTT--CTTACAAATATATTCCAAATAAAACTGTTGTAATT-AAACCACATGAGCCGAAATGGATTACC------AGTG-AAATAAAGCGCAATATTAGGGTTAGAAAAA--GAT---T-ATACAAAAAAGCCAAGAGATTCAAT---TC-AATTTA-TA-GTTGGAACAGGTTT--A----AAA--AA-TATA----GAAATGACGTTGTCAA--GCTTATACGCCA-AACTAAAA-T-GTTATACTACGAAAA-TTTAGCTTCT---AAATTAAATTC-A----C--CGTC-TCT--TTTGCCAAAGGACTG-GTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAACAT--------AT-TA------AA-TA-ATTT-TTTCCAGGA-A---CAG-ACA-A---TTCTTAATGATGAC-AATATTTTACCACC--AATCATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTATCGCCTAACGATGTAAGTAGTATCCTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138128 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAACAA----ACTGGAATAATG-TTATC---ACTGACGACATAAATGTGTATGCT----AGCAACT-T--ATC---TGC-----AAAATTAAA-GGAAATTT--CTTACAAATATATTCCAAATAAAACTGTTGTAATT-AAACCACATGAGCCGAAATGGATTACC------AGTG-AAATAAAGCGCAATATTAGGGTTAGAAAAA--GAT---T-ATACAAAAAAGCCAAGAGATTTAAT---TC-AATTTA-TA-GCTGGAACAGGTTT--A----AAA--AA-TATA----GAAATGACGTTGTGAA--GCTTATACGCAA-AAC-TAAA-AAGTTATACTACGAAAA-TTTAGCTTCT---AAATTAAATTC-A----C--CGTC-TCTT-TTGCCAAAAGAC-TG-GTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAACAT--------AT-TA------AA-TA-ATTT-TTTCCAGGA-A---CAG-ACA-A---TTCTTAATGATGAC-AATATTTTACCACC--AATCATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTATCGCCTAACGATGTAAGTAATATCTTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138129 : AAAGGCTTATCTGGAAATAT---GAACTTGGTAATTACGCTCTTTTA----AAAATTAAAAT-AATTGAAACTA----TCTGGAATGT-T-ATATCT--AACGATAACGTAAATGTGTATGCT----TCCAA---T--AT----TGC-TAATAAAATA-AA-TGAACTTT--CAAAGAAATGCATTCGAAACAAAATAGTTAAAATA-AAACCTAACGAACCACCATGGTTAACCGTT--GAACTAAAA-AAAA---AATATTAGGGTCCGGAAAA--GACT--T-TTTTAAAAAAGCAAAGAGGTC-AGC---GG-AAT
gi|138130 : AGACGCATATTTGGAAATAT---AAACGTGATAACTCCGCGCGTTTA----AAAAATAAAAT-AATTGAAATCA----ACTGAAATGG-A-
gi|138131 : AGACACATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAACTA----ACTGGAACGA-A-CTATCT--AACGATGGTGTAAACGTGTACGCT----ACCAA---T--GT----TGC-TAATAAAATT-AT-TGAACTTT--CAAATACTTGCATTCGCAATAAAATTATTAAAATT-AAACCTCATGAACCTCCTTGGATATCAACT--GAGTT-AAA-AAAG---AATATCAGGGTCCGTAAAA--GAC---T-ATTTAAAAAAGCCAAGAGGTCTAAC---GA-ATTATA-CC-ACTGGAACAGATTA--A----AAAAAAA-AAC-----GTAATGAGGTCGTTCA--ACTTATTCGTCA-AGC-AAAG-CAATCATATTATGATAA-TTTAGCAAAC---AAACTTAATTC-T----A--CTTC-TCTC-TCTCCCAAAGAC-TG-GTGGAAAATATTAAAGTCGTTTATCTCTTCAAATGA-CAAACCAG-----C--AACCCCTCCACTGAATGACAATGGAAC----TATTGT----TTCCGATTTTGGTT--TA--AAAGCCAATTT--------AC-TT------AATAA-TTTT-TTTC----A-ATCTCAG-TCA-A---TTTTAAATGACGAA-GACATTGAACCACC--CATTTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTATTACCGACCGATGTATGCAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138132 : AGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAACTA----ACTGGAACGA-A-CTATCT--TACGATGATGTAAACGTGTAAGCT----ACCAA---T--GT----TGC-TAATAAAATT-AT-TGAACTTT--CAAATACTTGCATTCCAAATAAAATTATAAAAATT-AAACTTCATGAATCTCCTTGGATATTAACT--GAGTT-AAA-AAAG---AATATCAGGGTCCGTAAAA--GAC---T-ATTTAGAAAAACAAAGAGGTCTAAC---GA-ATTATA-CC-ACTGGAACAGATTTAAA----AAA--AA-AAC-----GTAATGAGGTCGTTCA--ACTTATTCGCCA-AGC-AAAG-CAATCATATTATGATAA-TTTAGCAAAC---AAACTTAATTC-T----A--CTTC-TCTC-TCTCCCAAAGAC-TG-GTGGAAACTATTAAAGTCATTTATCTCTTCAAATGA-CAAACCAG-----C--AATCCCTCCACTGAATGGCAATGGAAC----TATT-T----TTCCGATTTTGGTT--TA--AAAGCCAATTT--------AC-TT------AA-TA-ATTT-TTCC----A-ATCTCAG-TCA-A---TTTTAAATGACGAA-GACATTGAACCACC--CATTTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTACTACCGACCGATGTATGTAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138133 : GACATGTCTGGAAATAG---TAACGTGGCGATTATA---TTTCATCCCAAGAATGAAAC-TAACGAAACAA----TCTGGAATTATG-TTACC---AATGACGACATAAATGTGTATGCT----AGCAACT-T--ATC---TGC-----AAAATT-AAAGGAAATTT--CTAATAGATATATTCCAAATAAAACTGTTGTAATTAAAACCACATGAGCCGAAATGGATTACTATT--GAAAT-AAA-GCGC---AAGATTAGGATTAGAATAA--GAT---TATACAAAAAAAGCCAAGATAT-TCAC---TACAAT-TAGTG-GCTGGAACAGG-TT--A----AAA--AA-TATA----GAAATGAGGTTGTCAA--GCTTATACACGA-AAT-TAAA-AAGTGATACTACAAAAA-TTTAAC---TTCGAAACTAAATTCAT----T--TATC-
gi|138134 : ATATGGAAATATAAGGAA---GGAAATTACCCTCTTTTA----AAA--CAAAATGCATC---ACTTTATGATTGGAACT----CCATCTTTGATAGTGATATTGATATTTATGCCTTAAAC--A---T--GTCTAATGC-CA-TAAAATC-A--TTAGCT-----GAAGAAACG-ATACCATCAAAAATTGTGAATATT-AGACCGTCTGACCCTCCATGGCT--TCATAATGAAAT-AAG-AAAG---AAAATGCGA--CTG-AGAA--AACATAT-TTATGACAAAGCAAAAAAGACAAACATAGA-AA-ATA----ATTGG--CTAATTT--ACAG-AAA--AA-TAC-----GCAACGAAGTCA--CATTATTAGTACGAAATAGT-AAAAACGA--ATATTTTAACAAATTTA-CACAC---AAACTCAAAAC-TCAAAA--TATC-TCAA-GCTC----AGAC-TG-GTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGATTACGA-----A--AAAGCTAACAT--------TT-TA------AA--CGAGTT-CTTC----ACATCCCAA-ACATT---TCT----TAACGATGAACAaattcaaatgataaaccagctgtccaatcacttcactatagtggaaacattgtctctgacaacaataccaaagcaaaatgttaaataatttcttccaggaacagaccattcttaatgatgacaatattttaccaccattccttttaccaagtgataacaatgaaaacgtatcaattattagtctacagcctaaccatgtaaatagtatcttaaaaacaataccaacaggcaaagcctc
gi|138135 : ATATGGAAATATAAGGAA---GGAAATTACCCTCTGTTA----AAA--CAAAATGCATC---ACTTTATGATTGGAACT----CCATCTTTGATAGTGATATTGATATTTATGCC-----CTAAACAT--GTCTAATGC-CA-TAAAATC-A--TTAGCT-----GAAGAAATG-ATACCGTCAAAAATTGTGAATATT-AGACCGTCTGACCCTCCATGGCT--TCATAATGAAAT-AAG-AAAG---AAAATGCGA--CTGAGAAAACGAA---T-TTATGACAAAGCAAAAAAGACAAACATAGA-AA-ATA----ATTGG--CTAATTT--ACAG-AAA--AA-TAC-----GCAACGAAGTCA--CATTATTAGTACGAAATAGT-AAAAACGA--ATATTTTAACAA-ACTTGCACAC---AAACTCAAAAC-TCAAAA--TATC-TCAA-GCTC----AGAC-TG-GTGGAAAACACTAAAAACTTTTATCca
gi|138136 : GAAATGC---GAACGTTGCGATTATGCTTCATTC----AAGAACGAACT-TAACAAAACAA----ACTGAAATGA-AGTTATC---AATGACAACATAAA-ATGTATGCT----AGCAA---CAAATA---TGCAAAATAAAATG-AA---AATTCTGACAAAAA----CATTCAAAATAAAGCTGTTGAAATT-AAACACCATGAGTCGAAATGGAT---TAC---TAGTG-AAATAAAGCGCATTAGTAGGGTTAGAAAAG--GAT---T-ATACAAAAAAGCTAAGAGATTCGAT---AC-AATA-A-CTAACTCGGACAGATTT--C----AAA--AC-ATA-----GAAATGACGCTGTCGA--GCTTATGCACGA-AAC-TAAA-AAATTATAAAAAGAAAA-TTTAGCTTCT---TAACTAAATTC----------ACCGTCTCGTTTGCCAAAAGA-CGTGTGGAAAACATTAAA--CATTTATCAATTCATATGG-TAAACCAG-----C--TGTCCCACCACTTAACCATCATGGAAA----CATTGT----CTCTGAC----AACAATACCAAACTGAACAT--------AT-TA------AA-TA-ATTTCTTCC----A-AGAACAG-ACA-G---TTATTAATGACGAC-AATATTTTACCACC--AATaaaccaaaaaaccaatcaaattcaatcccaacattaaaaagaaacgacatattatacactgacgactacgaaaaggctaacattttaaacgagttcttcacatcccaaacttttcttaacgatgaacaca
gi|138137 : GTATGGAACACCACGGATAACTGTT--AAACT-GAA-AAAT---AATATCAGTGCCCGAAAAA--GAC---T-ATTCAAAATGGCAGAGGGATCCAAT---GA-AAAGTT-TC-ACATGATGATATTT--A----AAC--GATATC-----GTAATGATGTAG-TCA--G-TCATACGTCA-AGC-TGGA-CGATTATATGAAGACAA-CTTAGCTGGT---AACCTCAATTA-T----A--CAAC-TATT-TCCCCCAAAGAC-GG-GTGATAAATATC--AGCCATTGATCTCTTCAAATAATTGAGTCAG-----TAAAATCTCTCCACTGGATGACAAcctattgtaacaaaata
gi|138126 : CTCCGTGGATATCCACG--GAG
gi|138138 : agagacatatttggatatatgaacttgatgactatgctcttttaaaaaataaaattgtttaaactaactggaacgatctatctaacgatgatgtagacgtgtatgctaccaatgttgctaataaaattaatgaactttcaaatatatgtattccaaataaaatcataaaaattaaaccgcatgaacCAGATTT--ATAAAAAA--AA-AAC-----ATAATGAGGTTGTCAA--AATTATACGCCA-AGC-AAAG-CAGTCATACTATGATAA-TCTAGCAAGT---AAACTTAATTC-T----G--CATC-TCTC-TCTCCCAAAGAC-TG-GTGGAAAATATTAAATTCGTTCATCTCTTCAAACGA-CAAGCAAT-----C--AATCCCTCCAGTGAATGACAATTGAAC----TATAAT----TTCCGATTTTGAGT--TA--AAAGCCAACTTTTTTAAAAGCTTAAAAGCCAATAC-ATTT-TTCC----A-ATCTCAG-TTA-A---TCTTAAATGACGAT-AACATTAAACTTCT--CATTTTGATACCTAG-----AC----AC----AACATCCCAGTTTTAGTAGATCTTGGTTTACTACCCAACGATGTGTGCAGTATTCTTAAGTCGTTACGAGTTGGAAAAGCCTCtaaaaaaagaatattagggcccgtaaaagacctttaaaaaaggcaaagagatctaacgaaatataccactggaacagatttaaaaaaaacgaaatgtaatgaggtcgtctaacttatacgccaagcaaagcagtcatactatgataatttagcaagtaaacataattctacatccctctctcccatcgactggtggaacatattaaagtcgctcatctcttcaaatgacaagccagcaatccctcaactgaatgacaatggaactattatttccgattttgagttaaaagccaacttactaaattcatttttccaatctcagtcaaacctcagaaataataataata
gi|138139 : AAGT---AAACTTAATTC-T----GCATATC-TCTC-TCTCCCAAAGAC-TG-GTGGAAAATATTAAAGGCGTTCATTTCTTCAAATGC-CAAGCAAG-----C--AATCGCTCCCCTGAATGACAATGGAAC----TATTAT----TAACGATTTTG-----------AGCCAACTT--------AC-TC------AATTC-ATTT-TTCC----A-ATCTCTA-TCA-A---TCTTCAATGACGAT-AACATTGAACCACC--TATTTTGATACCTAG-----AC----AA----GACATCCCAGTTTTATGAGATCTTGTTTTACTACCCACCGATGTGTGCAGTATTTTTAAGTCGTTACCAGTTGGAAAAACCT
gi|138133 : ACTAAATTCATTTATCAATTCAAATGA-TAAACCAGCTGTCC--AATCACTTCACT-----ATAGTGGAAA----CATTGT----CTCTGAC----AACAATACCAAAGCAAAA-T--------GT-TA------AA-TA-ATTT-CTTCCAGGA-A---CAGACCA-T---TCTT-AATGATGAC-AATATTTTACCACCATTCCTTT--TACCAAGTGATAACAATGAA----AACGTATCAA--TTATTAG-------TCTACAGCCTAACCATGTAAATAGTATCTTAAAAACAATACCAACAGGCAAAGCCTC
Alignments
lowQualScore : 111 11111 1111 111 2222222222222 1111 111 111 1111 11 11111 1111 1111 3333333333333 11111111 33333333333333333 22
lowQualScore : 000 3 2 3 6666 5 9 33333 3333 444 6 1 1 6666 2222222222222 0000 222 44 1 1 3 1 3 0 1 2 55 4 55 2 0 1 0 1 33 777 2 2 2 1 1 000 2 666 3 1 1 6666 00 33 8 777777 88888 5 99 3 33 11 999 0 33 77 5555 0 1 2 66666 33 2 2222 2 2222 3333333333333 3 00000000 2 888888 666 5 0 44 2 6666 6666 5 11 2 55 77 1 55555555555555555 8 00 0 4 1 1 1 1
lowQualScore : ... . . . .... . . ..... .... ... . . . .... ............. .... ... .. . . . . . . . . .. . .. . . . . . .. ... . . . . . ... . ... . . . .... .. .. . ...... ..... . .. . .. .. ... . .. .. .... . . . ..... .. . .... . .... ............. . ........ . ...... ... . . .. . .... .... . .. . .. .. . ................. . .. . . . . . .
lowQualScore : 000 0 7 9 1111 7 0 11111 7777 555 2 1 2 5555 2222222222222 3333 111 22 0 0 8 8 1 6 6 7 00 1 22 9 1 2 1 0 99 999 0 0 9 4 4 000 9 555 1 5 7 1111 77 11 6 777777 33333 7 77 9 99 99 333 8 77 33 7777 9 4 7 00000 77 1 1111 7 1111 4444444444444 8 44444444 9 222222 555 7 6 11 9 1111 8888 7 00 3 00 55 0 88888888888888888 0 11 3 7 6 0 0 0
consensus : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAACN----AACTGGAACGA-A-CTATCT--AAC-GACGACGTAGACGTGTATGCT----ACCAA---TG--TCT---GCTAA-TAAAATTAA-TGAACTTT--CAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGTAAACT--TAATTCTGCAT--CTCTC--TCTCCCAAAG----ACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAACTT--------AC-TA------AATTAATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACAT-CCCAGTTTTATTAGATCTTGCTTTACTACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
Reference ( family-867 ) : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAACN----AACTGGAACGA-A-CTATCT--AAC-GACGACGTAAACGTGTATGCT----ACCAA---TG--TCT---GCTAA-TAAAATTAA-TGAACTTT--CAAANANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATANCCACTGAGTT-AAAAAAGAATATTAGGGTCCGNAAAA--GAC---TNTNTAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTACGA-NAATTTAGCANGTAAACT--NAATTCTACAT--CTCTC--TCTCCCAAAG----ACTGGTGGAAAATATTAAAGTCGTTTATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTGT----TTCCGATTTTGAGC--TA--AAAGCCAACTT--------AC-TA------AATTNATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCNAG-----AC----AA----AACAT-CCCAG-TTTATTAGATCTTGCTTTACTACCCANCGATGTATGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
gi|138123 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCAAACT----TACTGGAACGA-A-TTATCT--AGC-GATGATGTAGACGTGTATGCT----ACCAA---TG--T-T---GCTAA-TAAAATTAA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACAGAGTT-AAAAAAGAATATTCGGGCCCGCAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTTCA--ACTTGTACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGTAAACT--TAGTTCTGTAT--CTCTC--TCTCCCAAAG----AATGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGGGC--TA--AAAGCCAACTT--------AC-TA------AATTCATTT-TTTCAATCTCAG-TCA-A----TCTG---AAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----AACAT-CCCAGTTTTACTAGATCTTGCTTTACTACTCATCGATGTGTGCAGTATTCTTAAGTCGTTTCCAGTTGGAAAAGCCTC
gi|138124 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCGAACC----AACTGGAACGA-A-CTATCT--AGC-GATGATGTAGACGTGTATGCT----ACCAA---TG--T-T---GCTAA-TACAATTAA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATTAAAGTTAAA-CCGCATGAACCTCCGTGGATATCC--TGAGTT-AAAAAAGAACATTAGGGCCCGTAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTAA----AAAA-AA-AAC-G-----TAATGAGGTCATCCA--ACTTATACGCCA-AGC-AAAGGAGTCATACTATGA-TAATTTATCAATTAAACT--TAATTCTGTAT--CTCTT--TCTCCCAAAG----ACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGATAATGGAAC----TATTAT----ATCCGATTTTGAGC--TA--AAAGCCAACTT--------AC-TA------AATTCATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCTAT--TTTGTTACGGAG-----AC----AA----AACAT-CCCAGTTTTATCAGATCTTGCTTTACTACCCATCGATGTGTGCAGTATTCTTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138125 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAC-TATGCAAACG----AACTGGAACGA-A-CTATCT--AAC-GATGATGCAGACGTGTATGCT----ACCAA---TG--T-T---GCTAA-AAAAATTGA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGATGATTTCCACTTATTA-AAAAAAGAATATTAAGGCCCGTAAAA--GGC-------------------AGAGATCTAAA---GT-AATATACC-A-CTGACACAGATT------AAA--AA-AAT-G-----TAATGAGGTCGTCCA--ACTTCTACGCCA-AGC-GAAGCAGTCATACTATGA-TAATTTAGCAAGTAAACT--TAATTCTGCAT--CTCTC--TCTCCCAAAG----ACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAGATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTTTGAATATGCGT--TA--AAATTCAACTT--------AC-TA------AATTCATTT-TTCCAATTTTGA-TCA-A----TCTT---AAATGACGAT-AACATTGAACC--------------ACCTA------------------------------TTT-TGATACCTTGCTTTTCTACCCACCTATATGTGCAGTATTCGTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138126 : AGAGACATATTTGGATATAT---GAACTTGATGACTATGCTCTTTTA----AAAAATAAAAT-TGTTTAAACT----AACTGGAACGA-T-CTATCT--AAC-GATGATGTAGACGTGTATGCT----ACCAA---TG--T-T---GCTAA-TAAAATTAA-TGAACTTT--CAAATATATGTATTCCAAATAAAATCATAAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACGGAGTA-AAAAAAGAATATTAGGGCCCGTAAAA--GAC---CTTTAAAAAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-GAAATGTAATGAGGTCGTCTA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGTAAACA--TAATTCTACAT--CCCTC--TCTCCCATCG----ACTGGTGGAACATATTAAAGTCGCTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCAACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGT--TA--AAAGCCAACTT--------AC-TA------AATTCATTT-TTCCAATCTCAG-TCA-A----ACCTCAGAAATAATAAT-AATA
gi|138127 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAACA----AACTGGAATAATG-TTATC----ACTGACGACATAAATGTGTATGCT----AGCAACT-TA--TCT---GC-----AAAATTAAAGGAAATTT--CTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTCAAT---TC-AATTTATA-G-TTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTCAA--GCTTATACGCCA-AACTAAAAT-GTTATACTACGA-AAATTTAGCTTCTAAATT--AAATTCACCGT--CTCTT--TTGCCAAAGG----ACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAACAT--------AT-TA------AATAATTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCAT-TTCA--TTTATTAGA-------CTATCGCCTAACGATGTAAGTAGTATCCTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138128 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAACA----AACTGGAATAATG-TTATC----ACTGACGACATAAATGTGTATGCT----AGCAACT-TA--TCT---GC-----AAAATTAAAGGAAATTT--CTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTTAAT---TC-AATTTATA-G-CTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTGAA--GCTTATACGCAA-AAC-TAAAAAGTTATACTACGA-AAATTTAGCTTCTAAATT--AAATTCACCGT--CTCTT--TTGCCAAAAG----ACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAACAT--------AT-TA------AATAATTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCAT-TTCA--TTTATTAGA-------CTATCGCCTAACGATGTAAGTAATATCTTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138129 : AAAGGCTTATCTGGAAATAT---GAACTTGGTAATTACGCTCTTTTA----AAAATTAAAAT-AATTGAAACT----ATCTGGAATGT-T-ATATCT--AAC-GATAACGTAAATGTGTATGCT----TCCAA---TA--T-T---GCTAA-TAAAATAAA-TGAACTTT--CAAAGAAATGCATTCGAAACAAAATAGTTAAAATAAAA-CCTAACGAACCACCATGGTTAACCGTTGAACTAAAAAAAAAATATTAGGGTCCGGAAAA--GACT--TTTTTAAAAAA-GCAAAGAGGTC-AGC---GG-AAT
gi|138130 : AGACGCATATTTGGAAATAT---AAACGTGATAACTCCGCGCGTTTA----AAAAATAAAAT-AATTGAAATC----AACTGAAATGG-A-
gi|138131 : AGACACATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAACT----AACTGGAACGA-A-CTATCT--AAC-GATGGTGTAAACGTGTACGCT----ACCAA---TG--T-T---GCTAA-TAAAATTAT-TGAACTTT--CAAATACTTGCATTCGCAATAAAATTATTAAAATTAAA-CCTCATGAACCTCCTTGGATATCAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAAAAAA-GCCAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTAA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGTCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAACAAACT--TAATTCTACTT--CTCTC--TCTCCCAAAG----ACTGGTGGAAAATATTAAAGTCGTTTATCTCTTCAAATGA-CAAACCAG-----C--AACCCCTCCACTGAATGACAATGGAAC----TATTGT----TTCCGATTTTGGTT--TA--AAAGCCAATTT--------AC-TT------AATAATTTT-TTTCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGG-TTTACCAGATCTTGCTTTATTACCGACCGATGTATGCAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138132 : AGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAACT----AACTGGAACGA-A-CTATCT--TAC-GATGATGTAAACGTGTAAGCT----ACCAA---TG--T-T---GCTAA-TAAAATTAT-TGAACTTT--CAAATACTTGCATTCCAAATAAAATTATAAAAATTAAA-CTTCATGAATCTCCTTGGATATTAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAGAAAA-ACAAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTTA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGCCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAACAAACT--TAATTCTACTT--CTCTC--TCTCCCAAAG----ACTGGTGGAAACTATTAAAGTCATTTATCTCTTCAAATGA-CAAACCAG-----C--AATCCCTCCACTGAATGGCAATGGAAC----TATT-T----TTCCGATTTTGGTT--TA--AAAGCCAATTT--------AC-TT------AA-TAATTT-TTCCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGG-TTTACCAGATCTTGCTTTACTACCGACCGATGTATGTAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138133 : GACATGTCTGGAAATAG---TAACGTGGCGATTA---TATTTCATCCCAAGAATGAAAC-TAACGAAACA----ATCTGGAATTATG-TTACC---AAT-GACGACATAAATGTGTATGCT----AGCAACT-TA--TCT---GC-----AAAATTAAAGGAAATTT--CTAATAGATATATTCCAAATAAAACTGTTGTAATTAAAACCACATGAGCCGAAATGGATTACTATTGAAAT-AAAGCGCAAGATTAGGATTAGAATAA--GAT---TATACAAAAAAAGCCAAGATAT-TCAC---TACAAT-TAGT-GGCTGGAACAGGTT-A----AAA--AA-TATAG-----AAATGAGGTTGT---------------CA-AGC--------TTATAC-ACGA-AA--TTAAAAAGTGA--------TACTACA----------------AAAATTTAACT--TCGAAA---CTAAATTCATTTATCAATTCAAATGA-TAAACCAGCTGTCC--AATCACTTCACT-----ATAGTGGAAA----CATTGT----CTCTGAC----AACAATACCAAAGCAAAA-T--------GT-TA------AA-TAATTTCTTCCAGGAACAGACCA-T----TCTT----AATGATGAC-AATATTTTACCACCATTCCTTT--TACCAAGTGATAACAATGAA----AACGT-ATCAA--TTATTAG-------TCTACAGCCTAACCATGTAAATAGTATCTTAAAAACAATACCAACAGGCAAAGCCTC
gi|138134 : ATATGGAAATATAAGGAA---GGAAATTACCCTCTTTTA----AAA--CAAAATGCATC---ACTTTATGATTGGAACT----CCATCTTTGAT-AGTGATATTGATATTTATGCCTTAAAC--A---TG--TCTAATGCCA--TAAAATCA--TTAGCT-----GAAGAAACG-ATACCATCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAA---ACATATTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAACAAATTTA-CACACAAACTCAAAACTCAAAAT--ATCTCAAGCTC----AG----ACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGATTACGA-----A--AAAGCTAACAT--------TT-TA------AACGAGTTC-TTCACATCCCAA-ACATT----TCTT---A----ACGATGAACA
gi|138135 : ATATGGAAATATAAGGAA---GGAAATTACCCTCTGTTA----AAA--CAAAATGCATC---ACTTTATGATTGGAACT----CCATCTTTGAT-AGTGATATTGATATTTATGCC-----CTAAACATG--TCTAATGCCA--TAAAATCA--TTAGCT-----GAAGAAATG-ATACCGTCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAAACGAA---TTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAA-CAAACTTGCACACAAACTCAAAACTCAAAAT--ATCTCAAGCTC----AG----ACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGACTACGA-----A--AAGGCTAACAT--------TT-TA------AACGAGTTC-TTCACATCCCA----A-ACTTTTCTT---A----ACGATGAACAca
gi|138136 : GAAATGC---GAACGTTGCGATTATGCTTCATTC----AAGAACGAACT-TAACAAAACA----AACTGAAATGA-AGTTATC---AAT-GACAACATAAA-ATGTATGCT----AGCAA---CAAATAT---GCAAAATAAAATGAA---AATTCTGACAAAAACAT----TCAAAATAAAGCTGTTGAAATTAAA-CACCATGAGTCGAAATGGATTACTAGTGAAAT-AAAGCGCATTAGTAGGGTTAGAAAAG--GAT---TATACAAAAAA-GCTAAGAGATTCGAT---AC-AATA-ACTAA-CTCGGACAGATTTC----AAA--AC-ATA-G-----AAATGACGCTGTCGA--GCTTATGCACGA-AAC-TAAAAAATTATAAAAAGA-AAATTTAGCTTCTTAACT--AAATTCACCGT--CTCGT--TTGCCAAAAG----ACGTGTGGAAAACATTAAA--CATTTATCAATTCATATGG-TAAACCAG-----C--TGTCCCACCACTTAACCATCATGGAAA----CATTGT----CTCTGAC----AACAATACCAAACTGAACAT--------AT-TA------AA-TAATTTCTTCCAAGAACAG-ACA-G----TTAT---TAATGACGAC-AATATTTTACCACCAAT--ca
gi|138137 : GTATGGAACACCACGGATAACTGTTAAACT-GAAAAATAATATCAGTGCCCGAAAAA--GAC---TATTCAAAATG-GCAGAGGGATCCAAT---GA-AAAGTTTC-A-CATGATGATATTTA----AAC--GATATC-G-----TAATGATGTAGTC----AGTCATACGTCA-AGC-TGGACGATTATATGAAGA-CAACTTAGCTGGTAACCT--CAATTATACAA--CTATT--TCCCCCAAAG----ACGGGTGATAAATATC--AGCCATTGATCTCTTCAAATAATTGAGTCAG-----TAAAATCTCTCCACTGGATGACAAcctattgtaacaaaata
gi|138138 : CAGATTTATAAAAAA--AA-AAC-A-----TAATGAGGTTGTCAA--AATTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATCTAGCAAGTAAACT--TAATTCTGCAT--CTCTC--TCTCCCAAAG----ACTGGTGGAAAATATTAAATTCGTTCATCTCTTCAAACGA-CAAGCAAT-----C--AATCCCTCCAGTGAATGACAATTGAAC----TATAAT----TTCCGATTTTGAGT--TA--AAAGCCAACTTTTTTAAAAGCTTAAAAGCCAATACATTT-TTCCAATCTCAG-TTA-A----TCTT---AAATGACGAT-AACATTAAACTTCTCAT--TTTGATACCTAG-----AC----AC----AACAT-CCCAGTTTTAGTAGATCTTGGTTTACTACCCAACGATGTGTGCAGTATTCTTAAGTCGTTACGAGTTGGAAAAGCCTC
gi|138139 : AAGTAAACT--TAATTCTGCATATCTCTC--TCTCCCAAAG----ACTGGTGGAAAATATTAAAGGCGTTCATTTCTTCAAATGC-CAAGCAAG-----C--AATCGCTCCCCTGAATGACAATGGAAC----TATTAT----TAACGATTTTG-----------AGCCAACTT--------AC-TC------AATTCATTT-TTCCAATCTCTA-TCA-A----TCTT---CAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----GACAT-CCCAGTTTTATGAGATCTTGTTTTACTACCCACCGATGTGTGCAGTATTTTTAAGTCGTTACCAGTTGGAAAAACCT
Alignments
lowQualScore : 111 111111111 1111 11111 11 2222 1111 111 1111 11 11111 1111 1111 2222222222222 22222222222222222 33333333333333333 111111
lowQualScore : 000 3 2 3 6666 5 9 333333333 3333 44444 6 1 1 6666 555 22 44 4444 555 0000 99 1 1 3 1 3 0 1 2 22 2 1 2 0 1 1 1 33 777 2 33 2 1 1 000 2 666 3 1 6666 00 33 8 777777 3 77 5 8 33 555 444 888 22 33 77 0 0 1 2 66666 33 2 2222 2222 8888888888888 66 11111111111111111 5 0 44 2 6666 6666 5 11 1 55 22 1 55555555555555555 0 88 00 000000 4 1 1 44 1 1
lowQualScore : ... . . . .... . . ......... .... ..... . . . .... ... .. .. .... ... .... .. . . . . . . . . .. . . . . . . . .. ... . .. . . . ... . ... . . .... .. .. . ...... . .. . . .. ... ... ... .. .. .. . . . . ..... .. . .... .... ............. .. ................. . . .. . .... .... . .. . .. .. . ................. . .. .. ...... . . . .. . .
lowQualScore : 000 0 7 9 1111 7 0 111111111 7777 55555 2 1 2 5555 444 77 22 2222 444 3333 55 3 0 2 8 1 6 6 7 00 0 0 9 1 2 6 0 99 999 0 66 9 4 4 000 9 555 1 5 1111 77 11 6 777777 6 99 7 6 99 888 777 333 55 99 99 9 2 4 7 00000 77 1 1111 1111 1111111111111 66 88888888888888888 7 6 11 9 1111 8888 7 00 0 00 66 2 88888888888888888 7 66 66 999999 0 4 0 22 0 0
consensus : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
Reference ( family-867 ) : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
gi|138123 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCAAAC----T----TACTGGAACGA-A-TTATC--T--AGC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACAGAGTT-AAAAAAGAATATTCGGGCCCGCAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTTCA--ACTTGTACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACTT--AGTTCTGTAT--CTCTC--TCTCCCAAAGAATGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGGGC--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTTCAATCTCAG-TCA-A----TCTG---AAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTACTAGATCTTGCTTTAC-TACTCATCGATGTGTGCAGTATTCTTAAGTCGTTTCCAGTTGGAAAAGCCTC
gi|138124 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCGAAC----C----AACTGGAACGA-A-CTATC--T--AGC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TACAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAGTTAAA-CCGCATGAACCTCCGTGGATATCC--TGAGTT-AAAAAAGAACATTAGGGCCCGTAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTAA----AAAA-AA-AAC-G-----TAATGAGGTCATCCA--ACTTATACGCCA-AGC-AAAGGAGTCATACTATGA-TAATTTATCAATT---AAACTT--AATTCTGTAT--CTCTT--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGATAATGGAAC----TATTAT----ATCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCTAT--TTTGTTACGGAG-----AC----AA----AACATCCCAGTTTTATCAGATCTTGCTTTAC-TACCCATCGATGTGTGCAGTATTCTTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138125 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAC-TATGCAAAC----G----AACTGGAACGA-A-CTATC--T--AAC-GATGATGCAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-AAAAATTGA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGATGATTTCCACTTATTA-AAAAAAGAATATTAAGGCCCGTAAAA--GGC-------------------AGAGATCTAAA---GT-AATATACC-A-CTGACACAGATT------AAA--AA-AAT-G-----TAATGAGGTCGTCCA--ACTTCTACGCCA-AGC-GAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAGATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTTTGAATATGCGT--TA--AAATTCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATTTTGA-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCTAT--TTTGATACCT-----------------------T----GCTTT------------TCTACCCACCTAT--ATGT--GCAGTATTCGTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138126 : AGAGACATATTTGGATATAT---GAACTTGATGACTATGCTCTTTTA----AAAAATAAAAT-TGTTTAAAC----T----AACTGGAACGA-T-CTATC--T--AAC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATAAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACGGAGTA-AAAAAAGAATATTAGGGCCCGTAAAA--GAC---CTTTAAAAAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-GAAATGTAATGAGGTCGTCTA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACAT--AATTCTACAT--CCCTC--TCTCCCATCGACTGGTGGAACATATTAAAGTCGCTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCAACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGT--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATCTCAG-TCA-A----ACCTCAGAAATAATAAT-AATA
gi|138127 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAAC----A----AACTGGAATAATG-TTATC------ACTGACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTCAAT---TC-AATTTATA-G-TTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTCAA--GCTTATACGCCA-AACTAAAAT-GTTATACTACGA-AAATTTAGCTTCT---AAATTA--AATTCACCGT--CTCTT--TTGCCAAAGGACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAAC-ATATTAAA---TAA-----------TTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTAT-CGCCTAACGATGTAAGTAGTATCCTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138128 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAAC----A----AACTGGAATAATG-TTATC------ACTGACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTTAAT---TC-AATTTATA-G-CTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTGAA--GCTTATACGCAA-AAC-TAAAAAGTTATACTACGA-AAATTTAGCTTCT---AAATTA--AATTCACCGT--CTCTT--TTGCCAAAAGACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAAC-ATATTAAA---TAA-----------TTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTAT-CGCCTAACGATGTAAGTAATATCTTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138129 : AAAGGCTTATCTGGAAATAT---GAACTTGGTAATTACGCTCTTTTA----AAAATTAAAAT-AATTGAAAC----T----ATCTGGAATGT-T-ATATC--T--AAC-GATAACGTAAATGTGTATGCT----TCCA---A--TA--T----T---GCTAA-TAAAATAAA-TGAACTTTCAAAGAAATGCATTCGAAACAAAATAGTTAAAATAAAA-CCTAACGAACCACCATGGTTAACCGTTGAACTAAAAAAAAAATATTAGGGTCCGGAAAA--GACT--TTTTTAAAAAA-GCAAAGAGGTC-AGC---GG-AAT
gi|138130 : AGACGCATATTTGGAAATAT---AAACGTGATAACTCCGCGCGTTTA----AAAAATAAAAT-AATTGAAAT----C----AACTGAAATGG-A-
gi|138131 : AGACACATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAAC----T----AACTGGAACGA-A-CTATC--T--AAC-GATGGTGTAAACGTGTACGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAT-TGAACTTTCAAATACTTGCATTCGCAATAAAATTATTAAAATTAAA-CCTCATGAACCTCCTTGGATATCAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAAAAAA-GCCAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTAA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGTCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAAC---AAACTT--AATTCTACTT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTTATCTCTTCAAATGA-CAAACCAG-----C--AACCCCTCCACTGAATGACAATGGAAC----TATTGT----TTCCGATTTTGGTT--TA--AAAGCCAAT-TTACTTAA---TAA-----------TTTT-TTTCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTAT-TACCGACCGATGTATGCAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138132 : AGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAAC----T----AACTGGAACGA-A-CTATC--T--TAC-GATGATGTAAACGTGTAAGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAT-TGAACTTTCAAATACTTGCATTCCAAATAAAATTATAAAAATTAAA-CTTCATGAATCTCCTTGGATATTAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAGAAAA-ACAAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTTA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGCCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAAC---AAACTT--AATTCTACTT--CTCTC--TCTCCCAAAGACTGGTGGAAACTATTAAAGTCATTTATCTCTTCAAATGA-CAAACCAG-----C--AATCCCTCCACTGAATGGCAATGGAAC----TATT-T----TTCCGATTTTGGTT--TA--AAAGCCAAT-TTACTTAA----TA-----------ATTT-TTCCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTAC-TACCGACCGATGTATGTAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138133 : GACATGTCTGGAAATAG---TAACGTGGCGATTA---TATTTCATCCCAAGAATGAAAC-TAACGAAAC----A----ATCTGGAATTATG-TTACC-----AAT-GACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTAATAGATATATTCCAAATAAAACTGTTGTAATTAAAACCACATGAGCCGAAATGGATTACTATTGAAAT-AAAGCGCAAGATTAGGATTAGAATAA--GAT---TATACAAAAAAAGCCAAGATAT-TCAC---TACAAT-TAGT-GGCTGGAACAGG-TTA----AAA--AA-TATAG-----AAATGAGGTTGTCAA--GCTTATACACGA-AAT-TAAAAAGTGATACTACAA-AAATTTAAC---TTCGAAACTA--AATTC
gi|138133 : ACTAAATTCATTTATCAATTCAAATGA-TAAACCAGCTGTCC--AATCACTTCACT-----ATAGTGGAAA----CATTGT----CTCTGAC----AACAATACCAAAGCAAAA--TGTTAAA----TA-----------ATTTCTTCCAGGAACAGACCA-T----TCTT----AATGATGAC-AATATTTTACCACCATTCCTTT--TACCAAGTGATAACAATGAA----AACGTATCAA--TTATTAG-------TCTAC-AGCCTAACCATGTAAATAGTATCTTAAAAACAATACCAACAGGCAAAGCCTCatttatcaattcaaatgataaaccagctgtccaatcacttcactatagtggaaacattgtctctgacaacaataccaaagcaaaatgttaaataatttcttccaggaacagaccattcttaatgatgacaatattttaccaccattccttttaccaagtgataacaatgaaaacgtatcaattattagtctacagcctaaccatgtaaatagtatcttaaaaacaataccaacaggcaaagcctc
gi|138134 : gacatgtctggaaatagtaacgtggcgattatatttcatcccaagaatgaaactaacgaaacaatctggaattatgttaccaatgacgacataaatgtgtatgctagcaacttatctgcaaaattaaaggaaatttctaatagatatattccaaataaaactgttgtaattaaaaccacatgagccgaaatggattactattgaaataaagcgcaagattaggattagaataagattatacaaaaaaagccaagatattcactacaattagtggctggaacaggttaaaaaatatagaaatgaggttgtcaagcttatacacgaaattaaaaagtgatactacaaaaatttaacttcgaaATATGGAAATATAAGGAA---GGAAATTACCCTCTTTTA----AAA--CAAAATGCATC---AC----TTTATGATTGGAACT----CCATC--TTTGAT-AGTGATATTGATATTTATGCCTTAAAC-----A--TG--TC---TAATGCCA--TAAAATCA--TTAGCT---GAAGAAACG-ATACCATCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAA---ACATATTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAACAAATTTA-CACAC---AAACTCAAAACTCAAAAT--ATCTCAAGCTC----AGACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGATTACGA-----A--AAAGCTAAC-ATTTTAAA---CGA-----------GTTC-TTCACATCCCAA-ACATT----TCTT---A----ACGATGAACA
gi|138135 : ATATGGAAATATAAGGAA---GGAAATTACCCTCTGTT------AAAACAAAATGCATC---ACTTTAT----GATTGGAACT----CCATCTTT--GAT-AGTGATATTGATATTTATGCC-----CTAAACA--TG--TCTAAT---GCC-A-TAAAATC-A-TTAGCT---GAAGAAATG-ATACCGTCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAAACGAA---TTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAA-CAAACTTGCACAC---AAACTCAAAACTCAAAAT--ATCTCAAGCTC----AGACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGACTACGA-----A--AAGGCTAAC-ATTTTAAA---CGA-----------GTTC-TTCACATCCCA----A-ACTTTTCTT---A----ACGATGAACAca
gi|138136 : GAAATGC---GAACGTTGCGATTATGCTTCATTC----AAGAACGAACT-TAACAAAAC----A----AACTGAAATGA-AGTTATC-----AAT-GACAACATAAA-ATGTATGCT----AGCA---A--CAAATA---T---GCAAAATAAAATGAA---AA--TTCTGACAAAAACATTCAAAATAAAGCTGTTGAAATTAAA-CACCATGAGTCGAAATGGATTACTAGTGAAAT-AAAGCGCATTAGTAGGGTTAGAAAAG--GAT---TATACAAAAAA-GCTAAGAGATTCGAT---AC-AATA-ACTAA-CTCGGACAGATTTC----AAA--AC-ATA-G-----AAATGACGCTGTCGA--GCTTATGCACGA-AAC-TAAAAAATTATAAAAAGA-AAATTTAGCTTCT---TAACTA--AATTCACCGT--CTCGT--TTGCCAAAAGACGTGTGGAAAACATTAAA--CATTTATCAATTCATATGG-TAAACCAG-----C--TGTCCCACCACTTAACCATCATGGAAA----CATTGT----CTCTGAC----AACAATACCAAACTGAAC-ATATTAAA----TA-----------ATTTCTTCCAAGAACAG-ACA-G----TTAT---TAATGACGAC-AATATTTTACCACCAAT--ca
gi|138137 : GTATGGAACACCACGGATAACTGTTAAACT-GAAAAATAATATCAGTGCCCGAAAAA--GAC---TATTCAAAATG-GCAGAGGGATCCAAT---GA-AAAGTTTC-A-CATGATGATATTTA----AAC--GATATC-G-----TAATGATGTAGTC----AGTCATACGTCA-AGC-TGGACGATTATATGAAGA-CAACTTAGCTGGT---AACCTC--AATTATACAA--CTATT--TCCCCCAAAGACGGGTGATAAATATC--AGCCATTGATCTCTTCAAATAATTGAGTCAG-----TAAAATCTCTCCACTGGATGACAAcctattgtaacaaaata
gi|138138 : CAGATTTATAAAAAA--AA-AAC-A-----TAATGAGGTTGTCAA--AATTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATCTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAATTCGTTCATCTCTTCAAACGA-CAAGCAAT-----C--AATCCCTCCAGTGAATGACAATTGAAC----TATAAT----TTCCGATTTTGAGT--TA--AAAGCCAACTTTTTTAAAAGCTTAAAAGCCAATACATTT-TTCCAATCTCAG-TTA-A----TCTT---AAATGACGAT-AACATTAAACTTCTCAT--TTTGATACCTAG-----AC----AC----AACATCCCAGTTTTAGTAGATCTTGGTTTAC-TACCCAACGATGTGTGCAGTATTCTTAAGTCGTTACGAGTTGGAAAAGCCTC
gi|138139 : AAGT---AAACTT--AATTCTGCATATCTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGGCGTTCATTTCTTCAAATGC-CAAGCAAG-----C--AATCGCTCCCCTGAATGACAATGGAAC----TATTAT----TAACGATTTTGAGC-----------CAAC-TTACTCAA---TTC-----------ATTT-TTCCAATCTCTA-TCA-A----TCTT---CAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----GACATCCCAGTTTTATGAGATCTTGTTTTAC-TACCCACCGATGTGTGCAGTATTTTTAAGTCGTTACCAGTTGGAAAAACCT
Alignments
lowQualScore : 111 111111111 1111 11111 11 2222 1111 111 1111 11 11111 1111 1111 2222222222222 22222222222222222 33333333333333333 111111
lowQualScore : 000 3 2 3 6666 5 9 333333333 3333 44444 6 1 1 6666 555 22 44 4444 555 0000 99 1 1 3 1 3 0 1 2 22 2 1 2 0 1 1 1 33 777 2 33 2 1 1 000 2 666 3 1 6666 00 33 8 777777 3 77 5 8 33 555 444 888 22 33 77 0 0 1 2 66666 33 2 2222 2222 8888888888888 66 11111111111111111 5 0 44 2 6666 6666 5 11 1 55 22 1 55555555555555555 0 88 00 000000 4 1 1 44 1 1
lowQualScore : ... . . . .... . . ......... .... ..... . . . .... ... .. .. .... ... .... .. . . . . . . . . .. . . . . . . . .. ... . .. . . . ... . ... . . .... .. .. . ...... . .. . . .. ... ... ... .. .. .. . . . . ..... .. . .... .... ............. .. ................. . . .. . .... .... . .. . .. .. . ................. . .. .. ...... . . . .. . .
lowQualScore : 000 0 7 9 1111 7 0 111111111 7777 55555 2 1 2 5555 444 77 22 2222 444 3333 55 3 0 2 8 1 6 6 7 00 0 0 9 1 2 6 0 99 999 0 66 9 4 4 000 9 555 1 5 1111 77 11 6 777777 6 99 7 6 99 888 777 333 55 99 99 9 2 4 7 00000 77 1 1111 1111 1111111111111 66 88888888888888888 7 6 11 9 1111 8888 7 00 0 00 66 2 88888888888888888 7 66 66 999999 0 4 0 22 0 0
consensus : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
Reference ( family-867 ) : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
gi|138123 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCAAAC----T----TACTGGAACGA-A-TTATC--T--AGC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACAGAGTT-AAAAAAGAATATTCGGGCCCGCAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTTCA--ACTTGTACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACTT--AGTTCTGTAT--CTCTC--TCTCCCAAAGAATGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGGGC--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTTCAATCTCAG-TCA-A----TCTG---AAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTACTAGATCTTGCTTTAC-TACTCATCGATGTGTGCAGTATTCTTAAGTCGTTTCCAGTTGGAAAAGCCTC
gi|138124 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCGAAC----C----AACTGGAACGA-A-CTATC--T--AGC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TACAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAGTTAAA-CCGCATGAACCTCCGTGGATATCC--TGAGTT-AAAAAAGAACATTAGGGCCCGTAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTAA----AAAA-AA-AAC-G-----TAATGAGGTCATCCA--ACTTATACGCCA-AGC-AAAGGAGTCATACTATGA-TAATTTATCAATT---AAACTT--AATTCTGTAT--CTCTT--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGATAATGGAAC----TATTAT----ATCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCTAT--TTTGTTACGGAG-----AC----AA----AACATCCCAGTTTTATCAGATCTTGCTTTAC-TACCCATCGATGTGTGCAGTATTCTTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138125 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAC-TATGCAAAC----G----AACTGGAACGA-A-CTATC--T--AAC-GATGATGCAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-AAAAATTGA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGATGATTTCCACTTATTA-AAAAAAGAATATTAAGGCCCGTAAAA--GGC-------------------AGAGATCTAAA---GT-AATATACC-A-CTGACACAGATT------AAA--AA-AAT-G-----TAATGAGGTCGTCCA--ACTTCTACGCCA-AGC-GAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAGATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTTTGAATATGCGT--TA--AAATTCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATTTTGA-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCTAT--TTTGATACCT-----------------------T----GCTTT------------TCTACCCACCTAT--ATGT--GCAGTATTCGTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138126 : AGAGACATATTTGGATATAT---GAACTTGATGACTATGCTCTTTTA----AAAAATAAAAT-TGTTTAAAC----T----AACTGGAACGA-T-CTATC--T--AAC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATAAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACGGAGTA-AAAAAAGAATATTAGGGCCCGTAAAA--GAC---CTTTAAAAAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-GAAATGTAATGAGGTCGTCTA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACAT--AATTCTACAT--CCCTC--TCTCCCATCGACTGGTGGAACATATTAAAGTCGCTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCAACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGT--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATCTCAG-TCA-A----ACCTCAGAAATAATAAT-AATA
gi|138127 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAAC----A----AACTGGAATAATG-TTATC------ACTGACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTCAAT---TC-AATTTATA-G-TTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTCAA--GCTTATACGCCA-AACTAAAAT-GTTATACTACGA-AAATTTAGCTTCT---AAATTA--AATTCACCGT--CTCTT--TTGCCAAAGGACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAAC-ATATTAAA---TAA-----------TTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTAT-CGCCTAACGATGTAAGTAGTATCCTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138128 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAAC----A----AACTGGAATAATG-TTATC------ACTGACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTTAAT---TC-AATTTATA-G-CTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTGAA--GCTTATACGCAA-AAC-TAAAAAGTTATACTACGA-AAATTTAGCTTCT---AAATTA--AATTCACCGT--CTCTT--TTGCCAAAAGACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAAC-ATATTAAA---TAA-----------TTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTAT-CGCCTAACGATGTAAGTAATATCTTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138129 : AAAGGCTTATCTGGAAATAT---GAACTTGGTAATTACGCTCTTTTA----AAAATTAAAAT-AATTGAAAC----T----ATCTGGAATGT-T-ATATC--T--AAC-GATAACGTAAATGTGTATGCT----TCCA---A--TA--T----T---GCTAA-TAAAATAAA-TGAACTTTCAAAGAAATGCATTCGAAACAAAATAGTTAAAATAAAA-CCTAACGAACCACCATGGTTAACCGTTGAACTAAAAAAAAAATATTAGGGTCCGGAAAA--GACT--TTTTTAAAAAA-GCAAAGAGGTC-AGC---GG-AAT
gi|138130 : AGACGCATATTTGGAAATAT---AAACGTGATAACTCCGCGCGTTTA----AAAAATAAAAT-AATTGAAAT----C----AACTGAAATGG-A-
gi|138131 : AGACACATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAAC----T----AACTGGAACGA-A-CTATC--T--AAC-GATGGTGTAAACGTGTACGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAT-TGAACTTTCAAATACTTGCATTCGCAATAAAATTATTAAAATTAAA-CCTCATGAACCTCCTTGGATATCAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAAAAAA-GCCAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTAA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGTCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAAC---AAACTT--AATTCTACTT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTTATCTCTTCAAATGA-CAAACCAG-----C--AACCCCTCCACTGAATGACAATGGAAC----TATTGT----TTCCGATTTTGGTT--TA--AAAGCCAAT-TTACTTAA---TAA-----------TTTT-TTTCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTAT-TACCGACCGATGTATGCAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138132 : AGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAAC----T----AACTGGAACGA-A-CTATC--T--TAC-GATGATGTAAACGTGTAAGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAT-TGAACTTTCAAATACTTGCATTCCAAATAAAATTATAAAAATTAAA-CTTCATGAATCTCCTTGGATATTAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAGAAAA-ACAAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTTA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGCCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAAC---AAACTT--AATTCTACTT--CTCTC--TCTCCCAAAGACTGGTGGAAACTATTAAAGTCATTTATCTCTTCAAATGA-CAAACCAG-----C--AATCCCTCCACTGAATGGCAATGGAAC----TATT-T----TTCCGATTTTGGTT--TA--AAAGCCAAT-TTACTTAA----TA-----------ATTT-TTCCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTAC-TACCGACCGATGTATGTAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138133 : GACATGTCTGGAAATAG---TAACGTGGCGATTA---TATTTCATCCCAAGAATGAAAC-TAACGAAAC----A----ATCTGGAATTATG-TTACC-----AAT-GACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTAATAGATATATTCCAAATAAAACTGTTGTAATTAAAACCACATGAGCCGAAATGGATTACTATTGAAAT-AAAGCGCAAGATTAGGATTAGAATAA--GAT---TATACAAAAAAAGCCAAGATAT-TCAC---TACAAT-TAGT-GGCTGGAACAGG-TTA----AAA--AA-TATAG-----AAATGAGGTTGTCAA--GCTTATACACGA-AAT-TAAAAAGTGATACTACAA-AAATTTAAC---TTCGAAACTA--AATTC
gi|138133 : ACTAAATTCATTTATCAATTCAAATGA-TAAACCAGCTGTCC--AATCACTTCACT-----ATAGTGGAAA----CATTGT----CTCTGAC----AACAATACCAAAGCAAAA--TGTTAAA----TA-----------ATTTCTTCCAGGAACAGACCA-T----TCTT----AATGATGAC-AATATTTTACCACCATTCCTTT--TACCAAGTGATAACAATGAA----AACGTATCAA--TTATTAG-------TCTAC-AGCCTAACCATGTAAATAGTATCTTAAAAACAATACCAACAGGCAAAGCCTCatttatcaattcaaatgataaaccagctgtccaatcacttcactatagtggaaacattgtctctgacaacaataccaaagcaaaatgttaaataatttcttccaggaacagaccattcttaatgatgacaatattttaccaccattccttttaccaagtgataacaatgaaaacgtatcaattattagtctacagcctaaccatgtaaatagtatcttaaaaacaataccaacaggcaaagcctc
gi|138134 : gacatgtctggaaatagtaacgtggcgattatatttcatcccaagaatgaaactaacgaaacaatctggaattatgttaccaatgacgacataaatgtgtatgctagcaacttatctgcaaaattaaaggaaatttctaatagatatattccaaataaaactgttgtaattaaaaccacatgagccgaaatggattactattgaaataaagcgcaagattaggattagaataagattatacaaaaaaagccaagatattcactacaattagtggctggaacaggttaaaaaatatagaaatgaggttgtcaagcttatacacgaaattaaaaagtgatactacaaaaatttaacttcgaaATATGGAAATATAAGGAA---GGAAATTACCCTCTTTTA----AAA--CAAAATGCATC---AC----TTTATGATTGGAACT----CCATC--TTTGAT-AGTGATATTGATATTTATGCCTTAAAC-----A--TG--TC---TAATGCCA--TAAAATCA--TTAGCT---GAAGAAACG-ATACCATCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAA---ACATATTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAACAAATTTA-CACAC---AAACTCAAAACTCAAAAT--ATCTCAAGCTC----AGACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGATTACGA-----A--AAAGCTAAC-ATTTTAAA---CGA-----------GTTC-TTCACATCCCAA-ACATT----TCTT---A----ACGATGAACA
gi|138135 : ATATGGAAATATAAGGAA---GGAAATTACCCTCTGTT------AAAACAAAATGCATC---ACTTTAT----GATTGGAACT----CCATCTTT--GAT-AGTGATATTGATATTTATGCC-----CTAAACA--TG--TCTAAT---GCC-A-TAAAATC-A-TTAGCT---GAAGAAATG-ATACCGTCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAAACGAA---TTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAA-CAAACTTGCACAC---AAACTCAAAACTCAAAAT--ATCTCAAGCTC----AGACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGACTACGA-----A--AAGGCTAAC-ATTTTAAA---CGA-----------GTTC-TTCACATCCCA----A-ACTTTTCTT---A----ACGATGAACAca
gi|138136 : GAAATGC---GAACGTTGCGATTATGCTTCATTC----AAGAACGAACT-TAACAAAAC----A----AACTGAAATGA-AGTTATC-----AAT-GACAACATAAA-ATGTATGCT----AGCA---A--CAAATA---T---GCAAAATAAAATGAA---AA--TTCTGACAAAAACATTCAAAATAAAGCTGTTGAAATTAAA-CACCATGAGTCGAAATGGATTACTAGTGAAAT-AAAGCGCATTAGTAGGGTTAGAAAAG--GAT---TATACAAAAAA-GCTAAGAGATTCGAT---AC-AATA-ACTAA-CTCGGACAGATTTC----AAA--AC-ATA-G-----AAATGACGCTGTCGA--GCTTATGCACGA-AAC-TAAAAAATTATAAAAAGA-AAATTTAGCTTCT---TAACTA--AATTCACCGT--CTCGT--TTGCCAAAAGACGTGTGGAAAACATTAAA--CATTTATCAATTCATATGG-TAAACCAG-----C--TGTCCCACCACTTAACCATCATGGAAA----CATTGT----CTCTGAC----AACAATACCAAACTGAAC-ATATTAAA----TA-----------ATTTCTTCCAAGAACAG-ACA-G----TTAT---TAATGACGAC-AATATTTTACCACCAAT--ca
gi|138137 : GTATGGAACACCACGGATAACTGTTAAACT-GAAAAATAATATCAGTGCCCGAAAAA--GAC---TATTCAAAATG-GCAGAGGGATCCAAT---GA-AAAGTTTC-A-CATGATGATATTTA----AAC--GATATC-G-----TAATGATGTAGTC----AGTCATACGTCA-AGC-TGGACGATTATATGAAGA-CAACTTAGCTGGT---AACCTC--AATTATACAA--CTATT--TCCCCCAAAGACGGGTGATAAATATC--AGCCATTGATCTCTTCAAATAATTGAGTCAG-----TAAAATCTCTCCACTGGATGACAAcctattgtaacaaaata
gi|138138 : CAGATTTATAAAAAA--AA-AAC-A-----TAATGAGGTTGTCAA--AATTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATCTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAATTCGTTCATCTCTTCAAACGA-CAAGCAAT-----C--AATCCCTCCAGTGAATGACAATTGAAC----TATAAT----TTCCGATTTTGAGT--TA--AAAGCCAACTTTTTTAAAAGCTTAAAAGCCAATACATTT-TTCCAATCTCAG-TTA-A----TCTT---AAATGACGAT-AACATTAAACTTCTCAT--TTTGATACCTAG-----AC----AC----AACATCCCAGTTTTAGTAGATCTTGGTTTAC-TACCCAACGATGTGTGCAGTATTCTTAAGTCGTTACGAGTTGGAAAAGCCTC
gi|138139 : AAGT---AAACTT--AATTCTGCATATCTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGGCGTTCATTTCTTCAAATGC-CAAGCAAG-----C--AATCGCTCCCCTGAATGACAATGGAAC----TATTAT----TAACGATTTTGAGC-----------CAAC-TTACTCAA---TTC-----------ATTT-TTCCAATCTCTA-TCA-A----TCTT---CAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----GACATCCCAGTTTTATGAGATCTTGTTTTAC-TACCCACCGATGTGTGCAGTATTTTTAAGTCGTTACCAGTTGGAAAAACCT
blockSeqs : AAG T T T TCCC G C TTTAT ATG TTT T T C TTAA AAC CT AA CTAA AAT AAAA AG A T T C A T G AT C T A T C T AC ATA T TT A A T ATA C CTA G A TAAA AA TA A AAATGT C TT T T CA AAT TCG CAA TG AT AA T T CTGTC AA T GACA ACAC TTTGAGCTA TT AGCTTAAAAGCCAATAC C AC T CTTT CAGA G GA T CC GT G TGATAACAATGAT GT TCTTGC C C T GT T A
blockSeqs : AAG T T T . G C TTTAT ATG TTT T T C . . CT . C . TAA AG A T T C . T G TT C T . T C T . T T TA . A T ATA . CC . C CAG AA A A T C TT T A T AAG . CAA TG . AA T . ATT . T GACA ACAC TATGCGTTA T TTC C T . . A G GA T . GA T TGATAACAATGAT GC TCTTGC . T T AA T A
blockSeqs : . T T T . . T C ATG T . T C . . CT . C . TAA AG A T T C . T G AT G T . T C T . . A AC . C T . . CC . A CAG A A A T T . . A T AAG . T TA . . T . ATT . T . . TTTGAGTTA T TTC . T . . A . TT A . AT A TGATAACAATGAA GG TCTTGC . T A AA A C
blockSeqs : . G C T . . G G AAG T . C T . . . . C . TAA T T A T T . G A TA G A . T T A . . A AC . C C . . CC . A . . A . A A . . . T TTC . T AC . . A . . . C . . AACAATACC T TTC . T . . T . TT A . AT A ACAA GG TCTTGG . T A AT A C
blockSeqs : . G C T . . G T AA T . C T . . . . C . TAA T T A T T . G A TA T A . T T A . . T TT . A T . . TA . A . . T . A A . . . A TTC . T AC . . A . . . C . . AACAATACC A TAA . A . . T . GA C . AA T ACAT GT TCTTGT . G C AT A T
blockSeqs : . T T C . . G A AA T . T T . . . . A . TAA T A A C A . A A AA C C . T T G . . A TT . C T . . TA . A . . T . T C . . . A AAA . A TA . . T . . . T . . TTTGGTTTA A TAA . A . . A . GA C . AA T ACAT GT . . G C AA A T
blockSeqs : . G T C . . G A AT T . T C . . . . . . TAA T A C C T . T T AT C T . C T T . . A TT . A T . . CC . A . . A . T C . . . T AAA . A TA . . T . . . T . . TTTGGTTTA T TAA . T . . A . TT A . GA A ACAC A . . T A GT A C
blockSeqs : . T T T . . C T TT T . T C . . . . . . CA T A C C T . T T AT T T . C T T . . A AC . C T . . CC . A . . A . A A . . . T ACA . T AA . . A . . . C . . AACAATACC T CGA . T . . A . TT A . GA T ACAA . . . C A GT T A
blockSeqs : . T T T . . C C GA . . C T . . . . . . CA T T G T T . G A TA A A . T T A . . T AT . A A . . GT . G . . T . C C . . . A ACA . T AA . . A . . . T . . AACAATACC A CGA . A . . A . AA C . . T . . . . C C . T A
blockSeqs : . G C C . . G T AA . . T T . . . . . . . T G A C T . T A TC A A . T A A . . T AT . A A . . TC . A . . T . C C . . . C TTC . A AC . . A . . . T . . TTTGAGTTA A TTC . A . . T . GA T .
blockSeqs : . G A C . . A T AA . . T T . . . . . . . T G A . T . T A TC G A . C A A . . A AC . T C . . . . . . . T . A G . . . A TGG . A TA . . A . . . T . . TTTGAGC A TA . T . . A .
blockSeqs : . . A T . . . A . . . C . . . . . . . . . T A . T . G A TA T A . . T A . . A TC . A C . . . . . . . A . T A . . . C AAG . C TG . . T . . . . . . TACGAA T TA . T . . C .
blockSeqs : . . C . . . . A . A A AA . C . . C A . . . . . . . . . . . A . T . . . . T AAG . T TG . . T . . . . . . TACGAA . TA . . . . . .
blockSeqs : . . T T . . . .
blockSeqCons :
originalCons : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
finalCons : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
Alignments
lowQualScore : 111 111111111 1111 11111 11 2222 1111 111 1111 11 11111 1111 1111 2222222222222 22222222222222222 33333333333333333 111111
lowQualScore : 000 3 2 3 6666 5 9 333333333 3333 44444 6 1 1 6666 555 22 44 4444 555 0000 99 1 1 3 1 3 0 1 2 22 2 1 2 0 1 1 1 33 777 2 33 2 1 1 000 2 666 3 1 6666 00 33 8 777777 3 77 5 8 33 555 444 888 22 33 77 0 0 1 2 66666 33 2 2222 2222 8888888888888 66 11111111111111111 5 0 44 2 6666 6666 5 11 1 55 22 1 55555555555555555 0 88 00 000000 4 1 1 44 1 1
lowQualScore : ... . . . .... . . ......... .... ..... . . . .... ... .. .. .... ... .... .. . . . . . . . . .. . . . . . . . .. ... . .. . . . ... . ... . . .... .. .. . ...... . .. . . .. ... ... ... .. .. .. . . . . ..... .. . .... .... ............. .. ................. . . .. . .... .... . .. . .. .. . ................. . .. .. ...... . . . .. . .
lowQualScore : 000 0 7 9 1111 7 0 111111111 7777 55555 2 1 2 5555 444 77 22 2222 444 3333 55 3 0 2 8 1 6 6 7 00 0 0 9 1 2 6 0 99 999 0 66 9 4 4 000 9 555 1 5 1111 77 11 6 777777 6 99 7 6 99 888 777 333 55 99 99 9 2 4 7 00000 77 1 1111 1111 1111111111111 66 88888888888888888 7 6 11 9 1111 8888 7 00 0 00 66 2 88888888888888888 7 66 66 999999 0 4 0 22 0 0
consensus : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
Reference ( family-867 ) : AGAGACATATTTGGAAATAT---GAACTTGGCGACTACGCTCTTTTA----AAAAATAAAAT-TATCGAAAC----N----AACTGGAACGA-A-CTATC--T--AAC-GACGACGTAGACGTGTATGCT----ACCA---A--TG--TC---T---GCTAA-TAAAATTAA-TGAACTTTCAAATANATGTATTCCAAATAAAATCGTTAAAATTAAA-CCGCATGAACCTCCGTGGATNNCCANTGAANT-AAAAAAGAATATTAGGGCCCGNAAAA--GAC---TNTNCAAAAAA-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTCCA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-NAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTA-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCNAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTATTAGATCTTGCTTTAC-TACCCANCGATGTGTGCAGTATTCTTAAGTCGTTACCAGCNGGNAAAGCCTC
gi|138123 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCAAAC----T----TACTGGAACGA-A-TTATC--T--AGC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACAGAGTT-AAAAAAGAATATTCGGGCCCGCAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-G-----TAATGAGGTCGTTCA--ACTTGTACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACTT--AGTTCTGTAT--CTCTC--TCTCCCAAAGAATGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGGGC--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTTCAATCTCAG-TCA-A----TCTG---AAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----AACATCCCAGTTTTACTAGATCTTGCTTTAC-TACTCATCGATGTGTGCAGTATTCTTAAGTCGTTTCCAGTTGGAAAAGCCTC
gi|138124 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-TATTCGAAC----C----AACTGGAACGA-A-CTATC--T--AGC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TACAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAGTTAAA-CCGCATGAACCTCCGTGGATATCC--TGAGTT-AAAAAAGAACATTAGGGCCCGTAAAA--GAC---TTTTTAAGAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTAA----AAAA-AA-AAC-G-----TAATGAGGTCATCCA--ACTTATACGCCA-AGC-AAAGGAGTCATACTATGA-TAATTTATCAATT---AAACTT--AATTCTGTAT--CTCTT--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAAATGA-CAAGCCAG-----C--AATTCCTCCACTGAATGATAATGGAAC----TATTAT----ATCCGATTTTGAGC--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATCTCAG-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCTAT--TTTGTTACGGAG-----AC----AA----AACATCCCAGTTTTATCAGATCTTGCTTTAC-TACCCATCGATGTGTGCAGTATTCTTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138125 : AGAGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAC-TATGCAAAC----G----AACTGGAACGA-A-CTATC--T--AAC-GATGATGCAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-AAAAATTGA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATTAAAATTAAA-CCGCATGAACCTCCGATGATTTCCACTTATTA-AAAAAAGAATATTAAGGCCCGTAAAA--GGC-------------------AGAGATCTAAA---GT-AATATACC-A-CTGACACAGATT------AAA--AA-AAT-G-----TAATGAGGTCGTCCA--ACTTCTACGCCA-AGC-GAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTCATCTCTTCAGATGA-CAAGCCAG-----C--AATCCCTCCACTGAATGACAATGGAAC----TATTAT----TTTTGAATATGCGT--TA--AAATTCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATTTTGA-TCA-A----TCTT---AAATGACGAT-AACATTGAACCACCTAT--TTTGATACCT-----------------------T----GCTTT------------TCTACCCACCTAT--ATGT--GCAGTATTCGTAAGTCGTTACCAGTTGGAAAAGCCTC
gi|138126 : AGAGACATATTTGGATATAT---GAACTTGATGACTATGCTCTTTTA----AAAAATAAAAT-TGTTTAAAC----T----AACTGGAACGA-T-CTATC--T--AAC-GATGATGTAGACGTGTATGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAA-TGAACTTTCAAATATATGTATTCCAAATAAAATCATAAAAATTAAA-CCGCATGAACCTCCGTGGATATCCACGGAGTA-AAAAAAGAATATTAGGGCCCGTAAAA--GAC---CTTTAAAAAAG-GCAAAGAGATCTAAC---GA-AATATACC-A-CTGGAACAGATTTA----AAA--AA-AAC-GAAATGTAATGAGGTCGTCTA--ACTTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATTTAGCAAGT---AAACAT--AATTCTACAT--CCCTC--TCTCCCATCGACTGGTGGAACATATTAAAGTCGCTCATCTCTTCAAATGA-CAAGCCAG-----C--AATCCCTCAACTGAATGACAATGGAAC----TATTAT----TTCCGATTTTGAGT--TA--AAAGCCAAC-TTACTAAA---TTC-----------ATTT-TTCCAATCTCAG-TCA-A----ACCTCAGAAATAATAAT-AATA
gi|138127 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAAC----A----AACTGGAATAATG-TTATC------ACTGACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTCAAT---TC-AATTTATA-G-TTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTCAA--GCTTATACGCCA-AACTAAAAT-GTTATACTACGA-AAATTTAGCTTCT---AAATTA--AATTCACCGT--CTCTT--TTGCCAAAGGACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAAC-ATATTAAA---TAA-----------TTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTAT-CGCCTAACGATGTAAGTAGTATCCTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138128 : AAAGACAAGTCTGGAAATAT---GAACGTGGCGATTATGCTTCATTC----AAGAATGAAAT-TAACGAAAC----A----AACTGGAATAATG-TTATC------ACTGACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTTACAAATATATTCCAAATAAAACTGTTGTAATTAAA-CCACATGAGCCGAAATGGATTACCAGTGAAAT-AAAGCGCAATATTAGGGTTAGAAAAA--GAT---TATACAAAAAA-GCCAAGAGATTTAAT---TC-AATTTATA-G-CTGGAACAGGTTTA----AAA--AA-TATAG-----AAATGACGTTGTGAA--GCTTATACGCAA-AAC-TAAAAAGTTATACTACGA-AAATTTAGCTTCT---AAATTA--AATTCACCGT--CTCTT--TTGCCAAAAGACTGGTGGAAAACATTAAAATCATTTATCAATTCAAATGA-TAAACCAG-----C--TGTCCCACCACTAAACGATAATGGAAA----CATTGT----CTCTGAT----AACAATACCAAAGCAAAC-ATATTAAA---TAA-----------TTTT-TTCCAGGAACAG-ACA-A----TTCT---TAATGATGAC-AATATTTTACCACCAAT--CATATTACCAAGTGATAAC----AATGATATCATTTCA--TTTATTAGA-------CTAT-CGCCTAACGATGTAAGTAATATCTTAAAAACACTGCCAACAGGCAAAGCCTC
gi|138129 : AAAGGCTTATCTGGAAATAT---GAACTTGGTAATTACGCTCTTTTA----AAAATTAAAAT-AATTGAAAC----T----ATCTGGAATGT-T-ATATC--T--AAC-GATAACGTAAATGTGTATGCT----TCCA---A--TA--T----T---GCTAA-TAAAATAAA-TGAACTTTCAAAGAAATGCATTCGAAACAAAATAGTTAAAATAAAA-CCTAACGAACCACCATGGTTAACCGTTGAACTAAAAAAAAAATATTAGGGTCCGGAAAA--GACT--TTTTTAAAAAA-GCAAAGAGGTC-AGC---GG-AAT
gi|138130 : AGACGCATATTTGGAAATAT---AAACGTGATAACTCCGCGCGTTTA----AAAAATAAAAT-AATTGAAAT----C----AACTGAAATGG-A-
gi|138131 : AGACACATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAAC----T----AACTGGAACGA-A-CTATC--T--AAC-GATGGTGTAAACGTGTACGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAT-TGAACTTTCAAATACTTGCATTCGCAATAAAATTATTAAAATTAAA-CCTCATGAACCTCCTTGGATATCAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAAAAAA-GCCAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTAA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGTCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAAC---AAACTT--AATTCTACTT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGTCGTTTATCTCTTCAAATGA-CAAACCAG-----C--AACCCCTCCACTGAATGACAATGGAAC----TATTGT----TTCCGATTTTGGTT--TA--AAAGCCAAT-TTACTTAA---TAA-----------TTTT-TTTCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTAT-TACCGACCGATGTATGCAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138132 : AGACATATTTGGAAATAT---GAACTTGGTGACTATGCTCTTTTA----AAAAATAAAAT-CATTCAAAC----T----AACTGGAACGA-A-CTATC--T--TAC-GATGATGTAAACGTGTAAGCT----ACCA---A--TG--T----T---GCTAA-TAAAATTAT-TGAACTTTCAAATACTTGCATTCCAAATAAAATTATAAAAATTAAA-CTTCATGAATCTCCTTGGATATTAACTGAGTT-AAAAAAGAATATCAGGGTCCGTAAAA--GAC---TATTTAGAAAA-ACAAAGAGGTCTAAC---GA-ATTATACC-A-CTGGAACAGATTTA----AAAAAAA-AAC-G-----TAATGAGGTCGTTCA--ACTTATTCGCCA-AGC-AAAGCAATCATATTATGA-TAATTTAGCAAAC---AAACTT--AATTCTACTT--CTCTC--TCTCCCAAAGACTGGTGGAAACTATTAAAGTCATTTATCTCTTCAAATGA-CAAACCAG-----C--AATCCCTCCACTGAATGGCAATGGAAC----TATT-T----TTCCGATTTTGGTT--TA--AAAGCCAAT-TTACTTAA----TA-----------ATTT-TTCCAATCTCAG-TCA-A----TTTT---AAATGACGAA-GACATTGAACCACCCAT--TTTAATACCTAG-----AC----AT----AACATCCCCGGTTTACCAGATCTTGCTTTAC-TACCGACCGATGTATGTAATATTCTTAATTTGTTACCAGCAGGTAAAGCCTC
gi|138133 : GACATGTCTGGAAATAG---TAACGTGGCGATTA---TATTTCATCCCAAGAATGAAAC-TAACGAAAC----A----ATCTGGAATTATG-TTACC-----AAT-GACGACATAAATGTGTATGCT----AGCA---ACTTA--TC---T---GC-----AAAATTAAAGGAAATTTCTAATAGATATATTCCAAATAAAACTGTTGTAATTAAAACCACATGAGCCGAAATGGATTACTATTGAAAT-AAAGCGCAAGATTAGGATTAGAATAA--GAT---TATACAAAAAAAGCCAAGATAT-TCAC---TACAAT-TAGT-GGCTGGAACAGG-TTA----AAA--AA-TATAG-----AAATGAGGTTGTCAA--GCTTATACACGA-AAT-TAAAAAGTGATACTACAA-AAATTTAAC---TTCGAAACTA--AATTC
gi|138133 : ACTAAATTCATTTATCAATTCAAATGA-TAAACCAGCTGTCC--AATCACTTCACT-----ATAGTGGAAA----CATTGT----CTCTGAC----AACAATACCAAAGCAAAA--TGTTAAA----TA-----------ATTTCTTCCAGGAACAGACCA-T----TCTT----AATGATGAC-AATATTTTACCACCATTCCTTT--TACCAAGTGATAACAATGAA----AACGTATCAA--TTATTAG-------TCTAC-AGCCTAACCATGTAAATAGTATCTTAAAAACAATACCAACAGGCAAAGCCTCatttatcaattcaaatgataaaccagctgtccaatcacttcactatagtggaaacattgtctctgacaacaataccaaagcaaaatgttaaataatttcttccaggaacagaccattcttaatgatgacaatattttaccaccattccttttaccaagtgataacaatgaaaacgtatcaattattagtctacagcctaaccatgtaaatagtatcttaaaaacaataccaacaggcaaagcctc
gi|138134 : gacatgtctggaaatagtaacgtggcgattatatttcatcccaagaatgaaactaacgaaacaatctggaattatgttaccaatgacgacataaatgtgtatgctagcaacttatctgcaaaattaaaggaaatttctaatagatatattccaaataaaactgttgtaattaaaaccacatgagccgaaatggattactattgaaataaagcgcaagattaggattagaataagattatacaaaaaaagccaagatattcactacaattagtggctggaacaggttaaaaaatatagaaatgaggttgtcaagcttatacacgaaattaaaaagtgatactacaaaaatttaacttcgaaATATGGAAATATAAGGAA---GGAAATTACCCTCTTTTA----AAA--CAAAATGCATC---AC----TTTATGATTGGAACT----CCATC--TTTGAT-AGTGATATTGATATTTATGCCTTAAAC-----A--TG--TC---TAATGCCA--TAAAATCA--TTAGCT---GAAGAAACG-ATACCATCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAA---ACATATTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAACAAATTTA-CACAC---AAACTCAAAACTCAAAAT--ATCTCAAGCTC----AGACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGATTACGA-----A--AAAGCTAAC-ATTTTAAA---CGA-----------GTTC-TTCACATCCCAA-ACATT----TCTT---A----ACGATGAACA
gi|138135 : ATATGGAAATATAAGGAA---GGAAATTACCCTCTGTT------AAAACAAAATGCATC---ACTTTAT----GATTGGAACT----CCATCTTT--GAT-AGTGATATTGATATTTATGCC-----CTAAACA--TG--TCTAAT---GCC-A-TAAAATC-A-TTAGCT---GAAGAAATG-ATACCGTCAAAAATTGTGAATATTAGA-CCGTCTGACCCTCCATGGCTTCATAATGAAAT-AAGAAAGAAAAT--GCGACTGAGAAAACGAA---TTTATGACAAA-GCAAAAAAGACAAACATAGA-AA-ATA---A-TTGG--CTAATTTACAG-AAA--AA-TAC-G-----CAACGAAGTCA--CATTATTAGTACGAAATAGTAAAAACGA--ATATTTTAA-CAAACTTGCACAC---AAACTCAAAACTCAAAAT--ATCTCAAGCTC----AGACTGGTGGAAAACACTAAAAACTTTTATCAAACCAAAAAA-CCAATCAAATT--C--AATCCCAACATTAAA----AA-GAAACGACATATTATACACTGACGACTACGA-----A--AAGGCTAAC-ATTTTAAA---CGA-----------GTTC-TTCACATCCCA----A-ACTTTTCTT---A----ACGATGAACAca
gi|138136 : GAAATGC---GAACGTTGCGATTATGCTTCATTC----AAGAACGAACT-TAACAAAAC----A----AACTGAAATGA-AGTTATC-----AAT-GACAACATAAA-ATGTATGCT----AGCA---A--CAAATA---T---GCAAAATAAAATGAA---AA--TTCTGACAAAAACATTCAAAATAAAGCTGTTGAAATTAAA-CACCATGAGTCGAAATGGATTACTAGTGAAAT-AAAGCGCATTAGTAGGGTTAGAAAAG--GAT---TATACAAAAAA-GCTAAGAGATTCGAT---AC-AATA-ACTAA-CTCGGACAGATTTC----AAA--AC-ATA-G-----AAATGACGCTGTCGA--GCTTATGCACGA-AAC-TAAAAAATTATAAAAAGA-AAATTTAGCTTCT---TAACTA--AATTCACCGT--CTCGT--TTGCCAAAAGACGTGTGGAAAACATTAAA--CATTTATCAATTCATATGG-TAAACCAG-----C--TGTCCCACCACTTAACCATCATGGAAA----CATTGT----CTCTGAC----AACAATACCAAACTGAAC-ATATTAAA----TA-----------ATTTCTTCCAAGAACAG-ACA-G----TTAT---TAATGACGAC-AATATTTTACCACCAAT--ca
gi|138137 : GTATGGAACACCACGGATAACTGTTAAACT-GAAAAATAATATCAGTGCCCGAAAAA--GAC---TATTCAAAATG-GCAGAGGGATCCAAT---GA-AAAGTTTC-A-CATGATGATATTTA----AAC--GATATC-G-----TAATGATGTAGTC----AGTCATACGTCA-AGC-TGGACGATTATATGAAGA-CAACTTAGCTGGT---AACCTC--AATTATACAA--CTATT--TCCCCCAAAGACGGGTGATAAATATC--AGCCATTGATCTCTTCAAATAATTGAGTCAG-----TAAAATCTCTCCACTGGATGACAAcctattgtaacaaaata
gi|138138 : CAGATTTATAAAAAA--AA-AAC-A-----TAATGAGGTTGTCAA--AATTATACGCCA-AGC-AAAGCAGTCATACTATGA-TAATCTAGCAAGT---AAACTT--AATTCTGCAT--CTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAATTCGTTCATCTCTTCAAACGA-CAAGCAAT-----C--AATCCCTCCAGTGAATGACAATTGAAC----TATAAT----TTCCGATTTTGAGT--TA--AAAGCCAACTTTTTTAAAAGCTTAAAAGCCAATACATTT-TTCCAATCTCAG-TTA-A----TCTT---AAATGACGAT-AACATTAAACTTCTCAT--TTTGATACCTAG-----AC----AC----AACATCCCAGTTTTAGTAGATCTTGGTTTAC-TACCCAACGATGTGTGCAGTATTCTTAAGTCGTTACGAGTTGGAAAAGCCTC
gi|138139 : AAGT---AAACTT--AATTCTGCATATCTCTC--TCTCCCAAAGACTGGTGGAAAATATTAAAGGCGTTCATTTCTTCAAATGC-CAAGCAAG-----C--AATCGCTCCCCTGAATGACAATGGAAC----TATTAT----TAACGATTTTGAGC-----------CAAC-TTACTCAA---TTC-----------ATTT-TTCCAATCTCTA-TCA-A----TCTT---CAATGACGAT-AACATTGAACCACCTAT--TTTGATACCTAG-----AC----AA----GACATCCCAGTTTTATGAGATCTTGTTTTAC-TACCCACCGATGTGTGCAGTATTTTTAAGTCGTTACCAGTTGGAAAAACCT