lowQualScore : 11 11111111111111111 11111 111111111 1111 11111 1111111 11111 111111111 1111111 1111 2222222 222 111 1111 11111111 1 1 1111 1 111
lowQualScore : 00 6 3 555 3 77 3 3 3 6666 0 3 3 44 1 3 0 2 44 77777 555 33 33 2 66666666666666666 2 33 2 33 11111 5 2 7 555 1 222222222 0 0000 555 00000 0000000 0 6666 11111 44 555555555 33 2 2 44 33 0 0000000 444 88888 7777 3 44 0 4 1 0 0 55 777 4 55 777 3 7777 3 777 3 3 44 3 2222 3333333 33 2 777 0 3 333 88 999 4 0 0 55 6 4 7777 4 99999 3 44444444 55 4 66 0 7 99 77 8 8 5555 3 000 5
lowQualScore : .. . . ... . .. . . . .... . . . .. . . . . .. ..... ... .. .. . ................. . .. . .. ..... . . . ... . ......... . .... ... ..... ....... . .... ..... .. ......... .. . . .. .. . ....... ... ..... .... . .. . . . . . .. ... . .. ... . .... . ... . . .. . .... ....... .. . ... . . ... .. ... . . . .. . . .... . ..... . ........ .. . .. . . .. .. . . .... . ... .
lowQualScore : 55 7 3 888 3 33 1 0 1 5555 3 1 1 22 8 0 1 9 77 11111 000 99 99 9 11111111111111111 9 99 9 99 66666 7 9 2 444 5 333333333 2 1111 444 88888 0000000 8 5555 33333 22 000000000 99 9 9 66 77 7 0000000 111 33333 1111 3 66 7 0 6 8 7 55 000 0 55 000 6 7777 3 999 3 3 66 3 9999 4444444 44 2 444 4 6 666 77 111 5 5 5 00 7 0 0000 0 11111 8 55555555 55 4 11 7 0 44 99 6 4 9999 3 000 7
consensus : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCATAGA---A-CGTTATAT--TATAAA-GCNTA-CATA----CAACCACA-TTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-ATATATTTTAGGAAA---TGAATAT---------GAAAGTCTTNA---TATTT-----CA-------TTCG----AAAG--A--CTGAAT--ATTTTN--------TCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTCCGCCATATT--TGTGTGAACTATT-CAACTTCGGTGAGTCAAT--CAATAA---T-ACATCCAT--CAT---GTT-GCGT----TC-AAGCTCAAA-T-AA--AAAT-GT----CTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCA-TATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAA-C---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATACGCTTAATAAATACCATACCGTTA-TTAGTTTTTGT--AAAAATAAATN---GATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
Reference ( gi|95794 ) : ATATATCTGGCTATTATCAAAGGTAAAAGATTATATTTCCATC-AA-CCATAGA---A-CGTTATAT--TATAAA-GCATA-CATA----CAACCACA-TTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-ATATATTTTAGGAAA---TGAATAT---------GAAAGTCTTTA---TATTT-----CA-------TTCG----AAAG--A--CTGAAT--ATTTTA--------TCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTCCGCCATATT--TATGTGAACTATT-CAACTTCGGTGAGTCAAT--CAATAA---T-ACATCCAT--CAT---GTT-GCGT----TC-ACGCTCAAA-T-AA--AAAT-GT----CTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCA-AATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAA-T---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCAAACCGTTG-TTAGTTTTTGT--AAACATAAATA---GATATTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95795 : ATATATCTGGCTATTATCAAAGGTAAAATATTATCTTTCCATC-AA-CCATAGA---A-CGTTATAT--TACAAA-GCATA-CATA----CAACCACA-TTTCA-ATTATTGT--TGTACAACTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGAAGAGGCGAGCATG-CAA-ATATATTTTAGGAAA---TGAATAT---------GAAAGTCTTTA---TATTT-----CA-------TTCG----AAAG--A--CTGACT--ATTTTA--------TCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TTA-----CATAGT----AAATGGTACA-GCTCCGCCATATT--GATGTAAACTATT-CAACTTCGGTGAGTCAAT--CAATAA---T-ACATCCAT--CAT---GTT-GCGT----TC-ACGCTCAAA-T-AA--AAAT-GT----CTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCA-TATTCGGGTGCAATT---ATTT-GAATAGTATTCCACTTAGTA--TAAGAAACGCGTGA-TC----G-TTAAA-T---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAACAAATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA--TAGTTTTTGT--AAAAATCAATT---GATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95796 : ATATATCTGGCTATTATCAAAGATAAAAGATTATCTTTCTATC-AA-CCATAGA---A-CGTTATAT--TACAAA-GCACA-CATA----CAACCACA-TTTCA-ATTATTGA--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AGA---ATA--TAA--A-TAA---G--------T----TAAATT--AA-GC--TGCAGAGGCAACAATG-CAA-ATATATTTTAGGAAA---TGAATAT---------GAAAGTCTTTA---TATTT-----CA-------TTCG----AAAG--A--CTGAAT--ATTTTA--------TCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TGA-----CATTGC----AAATGGTACA-GCTCCGCCAAATT--TGTGTGAACTATT-AAACTTCGGTGAGTCAAT--CAATAA---T-ACATCCAT--CAT---GTT-GCCT----TC-AAGCTCATA-T-AA--AAAT-GT----CTTTAT---T---CCG-AAACCTGT-AATAGAACTGTTTAAAGGTAGTC-TATCG-TATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGC-TGT-TC----G-TTAAA-T---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA-TTAGTTTTTGTAAAAAAATAAATT---GATTTTTCT---TT-TATTTCTATCGATATTATTAT
gi|95797 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCATAGA---A-CGTTATAT--TATAAA-GCATA-CATA----CAATCACA-TTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTT-AA-A--A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCA-----GAG---G-C----------------------GAGCAT---------GCAAAT----A---TATTT-----TA-------G--G----AAA-------TGAAT--ATG--------------AAAGATGAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GATCCGCCATATT--TATGTGAACTATT-CAACTTCGGTGAGTCAAT--CAATAA---T-ACATCCAT--CAT---GTT-GCGT----TC-ACGGTCAAA-T-AA--AAAT-GT----CTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TACCA-TTTTCGGGTGTAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAA-T---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATTAA--AGGAAATTGAAATAAGAAGTACAGGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA-TTAGTTTTTGT--AAAAATAAATT---GATTTTTGT---TT-TGTTGTGATCG
gi|95798 : ATATATCTGGCTATTATCGATGGTAAAATATTATCTTTCTATC-AA-CCATAGA---A-CGTTATAT--TACAAACGCTTG-CATA----CAACCACA-TTTCA-ATTATTGT--TGAACAGTTTGGGGAAATACTTAAA-AT-ACAATGAAA---ATA--TAT--A-TAA---G--------T----T--------------TGCA----------TA-CAA-ATATATTTTAGGAAA---TGAAAAT---------GAAAGTGTTAA---TGCTT-----CA-------TTCG----GAAG--A--GTGG-T--GTTTTC--------TCTATCAATC--------------------AAATGA--------A-------TGTG--AA-----TATAGC----AAATGGTACA-GCTTTGTCATATT--TGTTTGAATTATA-CAGCATCTGGGAGTCACT--TAATAA---A-ACAGCCAT--CGT---GTT-GCGT----TC-AAGCTCAAAAT-AG--AATT-GT----CTTAAT---T---CCA-AAACGCAG-AATATAAATGGTTAAATATAGTC-TACCA-TATTTGG-TGCAATT---ATATGAAATAGTATTCTATTTAGCA--TAAGAAACACGTTT-TC----G-TTAAA-T---GCTTTT--------GCTAGACAT--TGATTG-ATTTGGATAAA--AGGAAAATAAAATTAGAAA-A-----ACCTGCAACAGTTATACACTTGATAAAAACCATACC-TTGATTAG-TTTTGT--AAA-AT-ATTT---GCTTTTTGTTTGTT-TGTTTGTGTTGCTTTTATTAT
gi|95799 : ATATATATTGCTAT-ATCAAAGGTAAAAAATTATCTTTCCATT-AA-CCATAGA---A-CGTTACAT--TATAAA-GCATA-CATA----CAAGCACA-TTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAT-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-ATATATTTTAGGAAA---TGAATAT---------GAAAGTCTTTA---TATTT-----CA-------TTCG----AAAG--A--CTGAAT--ACTTTA--------TCTATCGATCAA--ACTG-TTTTTC-T-ACAAAC-GCAA
gi|95800 : ATATATCAGGCTATTATTGAAGGTAAACGATTATAGTTCTATC-AA-CCGTAGA---A-CACTATAT--TACAAA-GCTTA-TAAA----CAACCACA-TTTCA-ACT----T--TGT----TTTGGTGTA-TACTTTAA-AT-A-----AAA----TA--TAA--A-TAC---A--------------AA-GT--AC-AT--T-CAT---TAAGCATG-CAA-ATATATTTTAGGAAA---TTGATAA---------GAATGTC---AAACTATTT-----CA-------TTCG----AAAG--A--CTGAAT--ATTTTC--------TCTATCGATCAA--ACTG-TGTTTC-T-GCAAAAGACAAAACTCATGTACATTGTA-TAA-----CGAAGA----AAATGGTA------CCGCCATATT--TGT
gi|95801 : TATATCTGGATATTATCGAAGGTACAAGATTATTTTTCTATC-AA-CCATAGA---A-CGTTAACT--TACAAA-GATTA-TATA----CAACCACA-TTTCA-ATTATTGC--TATACAGTTTTGGAAAATATTTCAA-AT-A-----AAA---GTA--TAA--C-TAA---G--------T----TAA-TA--AA-AC--TGCAGAGGCGAGCATG-CAA-ATATATTTTAGGAAA---TGAATAT---------GAAAGTTTATA---TATTT-----CA-------TTCA----AAAG--T--CTGAAT--ATTTTG--------TCTATCGATCAA--ACTG-TTTTTC-T-GCAAACGGCAGAACTTA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTTCGCCATATT--TGTGTGA
gi|95802 : TGTAGCCGGTTTTTATCGAAAGTAAAAGGTTGTTGTTCTACC-AA-CCATTGATATA-CTTT-TGT--TTTA----CATAGCTCA----CAA-------------------------GCAATTTGGGGCAAT---T--A-AT-G-----AAA---ATA--AAA--A--AT---G--------T----AAA-TTCAAA-AC--TGCTTAGTCGAGCATA-CAA-ATGTATTTCAGGGAC---TCATTAT---------GAACGTCTAAA---TAGTT------A--------TAG----AAAA--AGCCTAAAT--GTTTTG--------TCTTTCTATCAA--ATAG-CTTTTCTT-ACCAA-GACAAA--TC---------GTA-T-A-----CAT-GC-----AATAGTAAATGTCCCGTTATACT--TGCGTGAGATATT-TAA------TG---C--------------T-ACATCTAT--CAT---CTT-GCGT----TC-AAGCTCAAA-T-TT--AAATAGT----TTT--------------AAACTTAA-AA
gi|95803 : TATTTGTGGCTATTAGCAAGAATGAAAACCTACA-TTCCATTAAA-TTACAGA---ATTGTT-TTC--TATAAA-GCTAA-TATT----CAACCCCA-TCTAG-ATGATTGT--AACGTAATTTGGGGTAATA---CA-----A-----AAA---AGA--TAATCA-TAAACCG--------TCTCCTAA-T------AT--TGCAAAAGAGTGCATG-CCGTAT-TATCTAAGGTGA---TCAATAT----------------TCAA---CATTTGCAGACA-------CTAT----GAAG------TTAAT--AATTTAATGCACTTTCCATTGATCAAAGAATA-TTTCTC-T--TAAA-AGCAAAATTTA-------TGTA-
gi|95804 : ATCTCTCTCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCATAGA---A-CGTTATAT--TATAAA-GCATA-CATA----CAACCACA-TTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-ATATATTTTAGGAAA---TGAATAT---------GAAAGTCTTTA---TATTT-----CA-------TTCG----AAAG--A--CTGAAT--ATTTTA--------TCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTCCGCCATATT--TATGTGAACTATT-CAACTTCGGTGAGTCAAT--CAATAA---T-ACATCCAT--CAT---GTT-GCGT----TC-ACGCTCAAA-T-AA--AAAT-GT----CTTTAT---T---CCGAAAACC------TAGAACTATTTAAAGGTAGTC-TATCA-TATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAA-T---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATGAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA-TTAGTTTTTGT--AAACATAAATA---TATTTTTGT---TT-TGTTTCTATCGATTTTATTATaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatctacgttcaacaaatatattaaacttaatcacaccaaaacccaacagagaatttttcaaaggtagtttatcctagtccgaaactttaatctgaaatagtatatcagttaatatcagaaactgtactacagtcaaaagttttacaacaaattatgttcaatggttacaaacagaatgaa
gi|95805 : TGGCTATTATCATGCATAAAAACCTACA-TTCCATTAAA-TTACAGA---A---TTATTTCCTATAAA-GTTTA-TATT----TAACC-CAGTCTAG-ATTATTGT--AACGTAATTTGAGGTAATA---CAA-A--A-----AAG---ATA--AAC--A-TAAACCG--------T----CTC-TT--AATAA--TGCAAAAGAGTGCGTGCCGC-AT-TATCCTAGGAGA---TCAATAT----------------TCAA---CATTTG----CA-------GACGCTATGAAGTTA--ATAAATGCACTT----------TCCATTGATCAA--AGAA-TATTTC-T-CCAAAAAGCAAAATTTA-------TGTA-CAGAGTTTCAAAAA----AAACAATGCA-CCTTCG---------TATATAA-------CA--TTTGTTTAAT--AC--CCATGG---TAACGTTCGTAGAAT---ACT-ACGT----TC-AA---CAAA-T--G--AAAT-AA----CTTTATCACT---CCA-AAATCCAA-CAAGGGATTATTCAAAGGTAGTT-TGTC--TATTC-TGTGCTTTA---ATATGGAATATTATACCGGTTAATA--TCAGAAACA---GT-TCTACAG-CCAAA-C---G-TTTT--------ACAACAAAT--TGT
gi|95806 : TGGCTATTATCAAAAATAAAAAACAACATT-CCATT-AAATTACAGA---A-TGA-ATTTC-TATAAA-GCTTA-TATC----AAACCCTG-TCTAAGATTATTGTAACGTA-AGTT-GGGG-------TCAA-AC-A----------------TAA--ACT-----G--------T----CTC-TT--AA-ATATTGCAAAAA--AGCATGTCTT-AT-TATCGTATGTAA---TCAATAT---------TCAA--CATCA----ATTT-----TACAGACGCTTTG----AA-GTTA--ATAAAT--ACATTT--------TCCATTGATCAA--ATAA-TATTTC-T-CCAAAAAACAAAATTTA-------TGT----A-----CAGAGTTTGAAAA----ACA-A----ACCATCTTCGTATATAAAA-A----AACAT--GTG------------TAA---T-AC--CCAT--GATAACGTT--CGTAAAATCTATGTTCAAC-A-AA--AGAT-TTAAA-TTGTATCACT---TCA-AAACCAAG-TATGGAATTGTTCAAAGGTAGTT-TGTCC-TCTCTGG----AACTTTAATCTGGAATAGTATATCGGTTAATA--TAAAAAA
gi|95807 : TAT--TATAAG-GCATA-CATAATGTCTACCA-A----CG-ATTACTGC--TATACCATTTGGGGACTTACTTC----C-A-----AAACTGACA--CAA--A-TAA---G--------A----TAC-TT--AA-AA--TACAAAATAGAGC-CG-CAA-A
gi|95808 : attttctttccccggatatgaaaatacttAAATATATCAATATTA-----AAA---ACAGTTAA--A-CAA---AAAGGACAAC----TAC-TT--AA-GC--CGCATAGAAGAGTATG-TAA-A---ATTATACAAAAATATCAATATCTTAGTCTAGAAAACCAT-A---TATCT-----CT-------TT-------AAA--A--CTG--------CTG--------TCTTTTGATAAA--AGCGATTTTTA-TCAAAAACAACAAAGTT-A-------TGAACTAA------ATAGT----TAATGGAACG-TCTCCGGCATATT--CAAACGAATTGTTTCAAAT---GAGAACGAATGACGAGAAAGTT-GCATTAAT---AC---GTTTAAGG----TC-AATTTCAAA-C-AG--AAA--------CTTTAT---TAAATCA-AAACCTAATAAT-GAAATGTTTAAAAGAAGGCTTATCA-TATCCTGAAGCAAAA---ATACGAAACGCCACTCCACTT-GTAATTACG-AATGC-TGTATA----T-TTAAA-CAAAGTCTCT-----------AATGAA--TACATGAATTTGGGTAAAATACAAAAGTAGGATTA-AAATA
gi|95811 : TCGATCAA--ACTG-TTTTTC-T-ACAAAC-GCAA
gi|95809 : ACGGCAAAACTCA-------TGTA-AAA-----CATAGC----AAATGGTACA-GCTTCACCATATT--TGTGTGAACTATT-CAACTTCGGGGAGTCAGT--TAACAA---T-ACATCCAT--CGT---GTT-GCGT----TC-AAGTTTAAA-T-AA--AAAT-GT----CTTTAT---T---CCG-AAACCTCT-AATAGAACTGTTTA------------------TTCGGATGCAATC---ATATGGAATAGTATTCAACTTAGTA--TGAGAAACGCGTGT-TC----G-TTAAA-C---GCTTTT--------GTAAGTTAT--TGCTTG-ATTTGGATAAA--AAGAAATTGGTATTAGAAATACATGTACTTCCAACAGCTTTATGCTTAATACATACCATACCGTCA-TTAGTTTTTGT--AAAAGT-AATATTTGATTTTTGT---TTGTTTTTGTATTGATTTTATTGTgtaattgtttgatttggataaaaggaaatgtacatgtacctccaacagctatacgcttagtcaaaaccataccgtaattagttattgtacaataaaaaaaaatgttttgtttctatcgattttattat
gi|95810 : gaaaatttattgaagattgcatgctatggaataaacatttacaatctctctacaaagaaacttcatcatacT-ACGT----TC-AA---CAAA-TTAATTAAA--------CTTTATCACT---CCA-AAACCCAA-CAGGGAATTATTCAAAGGTAGTT-TGTCC-TACTCTGG---AATTTTAATCTGGAATAGTATACCAGTTAATA--TCAGAAAC
gi|95803 : -ACGTTCAA--C-AA--ATAT-ATTAAACTTAAT---CACACCA-AAACCCAA-CAGAGAATTTTTCAAAGGTAGTT-TATCCTAGTCCGA----AACTTTAATCTGAAATAGTATATCAGTTAATA--TCAGAAAC---TGT-ACTACAG-TCAAA-A---G-TTTT--------ACAACAAATTATGTTCA-A--TGGTTACA--AACAGAATGAA
gi|95811 : tatttgtggctattagcaagaatgaaaacctacattccattaaattacagaattgttttctataaagctaatattcaaccccatctagatgattgtaacgtaatttggggtaatacaaaaaagataatcataaaccgtctcctaatattgcaaaagagtgcatgccgtattatctaaggtgatcaatattcaacatttgcagacactatgaagttaataatttaatgcactttccattgatcaaagaatatttctcttaaaagcaaaatttatgtaaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatct-TC----GATCAAACT---GTTTTTCTACAAACGCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAAT-----------GTACATGTACCTCCAACAGCTATACGCTTAGTCAAAACCATACCGTAA-TTAGTTATTGT--ACA-ATAAAAA---AAAA--TGT---TT-TGTTTCTATCGATTTTATTAT
Alignments
lowQualScore : 11111111111111111 111111111 1111111 1111111 111 1111 1111 11111111 1
lowQualScore : 1 1 2 5 2 2 555 66 2 1 6666 5 33 1 0 1 2 33 66666 444 33 33 2 33333333333333333 2 33 2 33 77777 2 0 2 33 33 2 0 111111111 0 55 99999 8888888 5555 88888 2 6666666 1 33 0 2 5 33 2 9999999 2 77777 6666 3 3 555 3 3 0 0 3 3 1 55 3 666 3 3 0 3 99 9999 3 6666 44 666 2 5555555 3 1 555 3 4 0 77 777 1 44 5 3 5555 3 1111 2 33333333 55 4 55 2 66 0 0 5 5 1 888 5
lowQualScore : . . . . . . ... .. . . .... . .. . . . . .. ..... ... .. .. . ................. . .. . .. ..... . . . .. .. . . ......... . .. ..... ....... .... ..... . ....... . .. . . . .. . ....... . ..... .... . . ... . . . . . . . .. . ... . . . . .. .... . .... .. ... . ....... . . ... . . . .. ... . .. . . .... . .... . ........ .. . .. . .. . . . . . ... .
lowQualScore : 1 5 9 7 9 9 000 88 9 0 1111 7 99 1 8 1 7 88 77777 777 77 77 7 88888888888888888 7 77 7 77 55555 7 9 7 77 66 9 7 444444444 1 22 33333 7777777 7777 66666 7 3333333 9 77 5 7 3 77 7 3333333 9 77777 5555 1 1 444 3 6 1 5 6 6 4 00 6 444 6 6 5 1 44 6666 1 5555 22 000 5 5555555 1 4 444 3 3 4 88 555 0 66 0 6 5555 6 0000 6 22222222 00 0 55 0 99 0 1 0 0 0 888 0
consensus : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTCCGC-CATA---TTTGTGTG-AACTATT-CAACTTCGGTG-A-GTCAAT--CA-ATAA---TA-CATCCAT-CGTGT-TGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTGT--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
Reference ( family-845 ) : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTCCGC-CATA---TTTGTGTG-AACTATT-CAACTTCGGTG-A-GTCAAT--CA-ATAA---TA-CATCCAT-CATGT-TGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATACGCTTAATAAATACCATACCGTTATTAGTTTTTGT--AAAA-ATAA-A-TNGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95794 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATATTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTCCGC-CATA---TTTATGTG-AACTATT-CAACTTCGGTG-A-GTCAAT--CA-ATAA---TA-CATCCAT-CATGT-TGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCAAATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCAAACCGTTGTTAGTTTTTGT--AAAC-ATAA-A-TAGATATTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95795 : ATATATCTGGCTATTATCAAAGGTAAAATATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAACTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGAAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGACT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TTA-----CATAGT----AAATGGTACA-GCTCCGC-CATA---TTGATGTA-AACTATT-CAACTTCGGTG-A-GTCAAT--CA-ATAA---TA-CATCCAT-CATGT-TGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTT-GAATAGTATTCCACTTAGTA--TAAGAAACGCGTGA-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAACAAATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA-TAGTTTTTGT--AAAA-ATCA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95796 : ATATATCTGGCTATTATCAAAGATAAAAGATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCACACATA----CAACCACATTTCA-ATTATTGA--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AGA---ATA--TAA--A-TAA---G--------T----TAAATT--AA-GC--TGCAGAGGCAACAATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TGA-----CATTGC----AAATGGTACA-GCTCCGC-CAAA---TTTGTGTG-AACTATT-AAACTTCGGTG-A-GTCAAT--CA-ATAA---TA-CATCCAT-CATGT-TGCCTTCAAGCTCATA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTGT-AATAGAACTGTTTAAAGGTAGTC-TATCGTATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGC-TGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTGTAAAAAA-ATAA-A-TTGATTTTTCT---TT-TATTTCTATCGATATTATTAT
gi|95797 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAATCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTT-AA-A--A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCA-----GAG---G-C-----------------------GAGCAT---------GCAAAT----ATATTT-----TA-------G--G----AAA-------TGAAT-ATG-------------AAAGATGAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GATCCGC-CATA---TTTATGTG-AACTATT-CAACTTCGGTG-A-GTCAAT--CA-ATAA---TA-CATCCAT-CATGT-TGCGTTCACGGTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TACCATTTTCGGGTGTAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATTAA--AGGAAATTGAAATAAGAAGTACAGGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTGT--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTGTGATCG
gi|95798 : ATATATCTGGCTATTATCGATGGTAAAATATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAACGCTTGCATA----CAACCACATTTCA-ATTATTGT--TGAACAGTTTGGGGAAATACTTAAA-AT-ACAATGAAA---ATA--TAT--A-TAA---G--------T----T--------------TGCA----------TA-CAA-A--TA-TATTTTAGGAA-ATGAAAAT---------GAAAGTGTTAATGCTT-----CA-------TTCG----GAAG--A--GTGG-T-GTTT-------TCTCTATCAATCAA--A-TG-------------AATG-----------------TG----AA-----TATAGC----AAATGGTACA-GCTTTGT-CATA---TTTGTTTG-AATTATA-CAGCATCTGGG-A-GTCACT--TA-ATAA---AA-CAGCCAT-CGTGT-TGCGTTCAAGCTCAAAA---T-A----G--AATT-GTCTTAAT---T---CCA-AAACGCAG-AATATAAATGGTTAAATATAGTC-TACCATATTTGG-TGCAATT---ATATGAAATAGTATTCTATTTAGCA--TAAGAAACACGTTT-TC----G-TTAAAT---GCTTTT--------GCTAGACAT--TGATTG-ATTTGGATAAA--AGGAAAATAAAATTAGAAA-A-----ACCTGCAACAGTTATACACTTGATAAAAACCATACCTTGATTAG-TTTTGT--AAAATAT-----TTGCTTTTTGTTTGTT-TGTTTGTGTTGCTTTTATTAT
gi|95799 : ATATATATTGCTAT-ATCAAAGGTAAAAAATTATCTTTCCATT-AA-CCAT-AGAA-CGTTACA---T--TATAAA-GCATACATA----CAAGCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAT-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ACTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAAC-GCAA
gi|95800 : ATATATCAGGCTATTATTGAAGGTAAACGATTATAGTTCTATC-AA-CCGT-AGAA-CACTATA---T--TACAAA-GCTTATAAA----CAACCACATTTCA-ACT----T--TGT----TTTGGTGTA-TACTTTAA-AT-A-----AAA----TA--TAA--A-TAC---A--------------AA-GT--AC-AT--T-CAT---TAAGCATG-CAA-A--TA-TATTTTAGGAA-ATTGATAA---------GAATGTCAAACTATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TCTCTATCGATCAA--ACTG-TGTTTC-T-GCAAAAGACAAAACTCATGTACATTGTA-TAA-----CGAAGA----AAATGGTA------CCGC-CATA---TTTGT
gi|95801 : TATATCTGGATATTATCGAAGGTACAAGATTATTTTTCTATC-AA-CCAT-AGAA-CGTTAAC---T--TACAAA-GATTATATA----CAACCACATTTCA-ATTATTGC--TATACAGTTTTGGAAAATATTTCAA-AT-A-----AAA---GTA--TAA--C-TAA---G--------T----TAA-TA--AA-AC--TGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTTTATATATTT-----CA-------TTCA----AAAG--T--CTGAAT-ATTT-------TGTCTATCGATCAA--ACTG-TTTTTC-T-GCAAACGGCAGAACTTA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTTCGC-CATA---TTTGTGTG-A
gi|95802 : TGTAGCCGGTTTTTATCGAAAGTAAAAGGTTGTTGTTCTACC-AA-CCAT-TGA-----TATACTTT--TGT-----TTTACATA----G---CTCA---CA-A------------GCAATTTGGGGCAAT---T--A-AT-G-----AAA---ATA--AAA--A--AT---G--------T----AAA-TTCAAA-AC--TGCTTAGTCGAGCATA-CAA-A--TG-TATTTCAGGGA-CTCATTAT---------GAACGTCTAAATAGTT------A--------TAG----AAAA--AGCCTAAAT-GTTT-------TGTCTTTCTATCAA--ATAG-CTTTTCTT-ACCAA-GACAAA--TC---------GTA-T-A-----CAT-GC-----AATAGTAAATGTCCCGT-TATA---CTTGCGTG-AGATATT-TAA------TG-----C---------------TA-CATCTAT-CATCT-TGCGTTCAAGCTCAAA----T-T----T--AAATAGTTTT--------------AAACTTAA-AA
gi|95803 : TATTTGTGGCTATTAGCAAGAATGAAAACCTA-CATTCCATTAAA-TTAC-AGAATTGTT-TT---C--TATAAA-GCTAATATT----CAACCCCATCTAG-ATGATTGT--AACGTAATTTGGGGTAATA---CA-----A-----AAA---AGA--TAATCA-TAAACCG--------TCTCCTAA-T------AT--TGCAAAAGAGTGCATG-C-C-G--TATTATCTAAGGTG-ATCAATAT----------------TCAACATTTGCAGACA-------CTAT----GAAG------TTAATAATTTAATGCACTTTCCATTGATCAAAGAATA-TTTCTC-T--TAAA-AGCAAAATTTA-------TGTA-
gi|95803 : -TACGTTCAA---CAAA----T-ATATTA--AA-----CTTAAT---CACACCA-AAACCCAA-CAGAGAATTTTTCAAAGGTAGTT-TATCCTAGTC---CGAAACTTTAATCTGAAATAGTATATCAGTTAATA--TCAGAAAC---TGT-ACTACAG-TCAAAA---G-TTTT--------ACAACAAATTATGTTCA-A--TGGTTACA--AACAGAATGAAaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatctacgttcaacaaatatattaaacttaatcacaccaaaacccaacagagaatttttcaaaggtagtttatcctagtccgaaactttaatctgaaatagtatatcagttaatatcagaaactgtactacagtcaaaagttttacaacaaattatgttcaatggttacaaacagaatgaa
gi|95804 : tatttgtggctattagcaagaatgaaaacctacattccattaaattacagaattgttttctataaagctaatattcaaccccatctagatgattgtaacgtaatttggggtaatacaaaaaagataatcataaaccgtctcctaatattgcaaaagagtgcatgccgtattatctaaggtgatcaatattcaacatttgcagacactatgaagttaataatttaatgcactttccattgatcaaagaatatttctcttaaaagcaaaatttatgtaaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatcATCTCTCTCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA-AC--TGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGC----AAATGGTACA-GCTCCGC-CATA---TTTATGTG-AACTATT-CAACTTCGGTG-A-GTCAAT--CA-ATAA---TA-CATCCAT-CATGT-TGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCGAAAACC------TAGAACTATTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATGAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTGT--AAAC-ATAA-A-TATATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95805 : TGGCTATTATCATGCATAAAAACCTA-CATTCCATT-AAATTAC-AGAA---TTATT---TCCTATAAA-GTTTATATT----TAACC-CAGTCTAGATTATTGT--AACGTAATTTGAGGTAATAC---AA-A--A-----AAG---ATA--AAC--A-TAAACCG--------T----CTC-TT--AATAA--TGCAAAAGAGTGCGTG-CCGCA--T--TATCCTAGGAG-ATCAATAT----------------TCAACATTTG----CA-------GACGCTATGAAGTTA--ATAAAT-GCAC-------TTTCCATTGATCAA--AGAA-TATTTC-T-CCAAAAAGCAAAATTTA-------TGTA-CAGAGTTTCAAAAA----AAACAATGCA-CCTTCGTATATAACATTTGTTTA-A--TACC-CA----TGGTA-ACGT---T--CGTAGAA---TA-C-------------TACGTTCAA---CAAA----T-G----A--AA-T-AACTTTATCACT---CCA-AAATCCAA-CAAGGGATTATTCAAAGGTAGTT-TGTC-TATTCTG-TGCTTTA---ATATGGAATATTATACCGGTTAATA--TCAGAAACA---GT-TCTACAG-CCAAAC---G-TTTT--------ACAACAAAT--TGT
gi|95806 : TGGCTATTATCAAAAATAAAAAACAA-CATTCCATT-AAATTAC-AGAA-TGA-ATT---TC-TATAAA-GCTTATATC----AAACCCTGTCTAAGATTATTGTAACGTA-AGTT-GGGG-------TCAA-AC-A----------------TAA--ACT-----G--------T----CTC-TT--AA-ATATTGCAAAAA--AGCATGTCTT-A--T--TATCGTATGTA-ATCAATAT---------TCAA--CATCA-ATTT-----TACAGACGCTTTG----AA-GTTA--ATAAAT-ACAT-------TTTCCATTGATCAA--ATAA-TATTTC-T-CCAAAAAACAAAATTTA-------TGTA---------CAGAGTTTGAAAA----ACA-A----AC-CATC---TTCGTATATAAAAA----AACAT--GTGTA-AT--AC--CC-ATGA---TAACGTTCGT-AAAATCTATGTTCAA---CAAAAGATT-T----A--AATT-GTATC-AC---T---TCA-AAACCAAG-TATGGAATTGTTCAAAGGTAGTT-TGTCCTCTCTGG----AACTTTAATCTGGAATAGTATATCGGTTAATA--TAAAAAA
gi|95807 : ATTTTCTTTCC-CC-GG-ATATGAAAA-TACTTTA---T--TATAAG-GCATACATAATGTCTACCA-A---CG-ATTACTGC--TATACCATTTGGGGACTTACTTC----C-A-----AAACTGACA--CAA--A-TAA---G--------A----TAC-TT--AA-AA--TACAAAATAGAGC-CG-CAA-A--
gi|95808 : AAATATATCAATATTA-----AAA---ACAGTTAA--A-CAA---AAAGGACAAC----TAC-TT--AA-GC--CGCATAGAAGAGTATG-TAA-AATTA-TAC---AAAAATATCAATATCTTAGTCTAGAAAACCAT-ATATCT-----CT-------TT-------AAA--A--CTG-------C-------TGTCTTTTGATAAA--AGCGATTTTTA-TCAAAAACAACAAAGTT-A-------TGAACTAA------ATAGT----TAATGGAACG-TCTCCGG-CATA---TTCAAACG-AATTGTTTCAAAT---GAG-A-ACGAATGACG-AGAAAGTTG-CATTAATACGT-T-TAAGGTCAATTTCAAA----C-A----G--AAA----CTTTAT---TAAATCA-AAACCTAATAAT-GAAATGTTTAAAAGAAGGCTTATCATATCCTGAAGCAAAA---ATACGAAACGCCACTCCACTT-GTAATTACG-AATGC-TGTATA----T-TTAAACAAAGTCTCT-----------AATGAA--TACATGAATTTGGGTAAAATACAAAAGTAGGATTA-AAATA
gi|95809 : ATTG-----CA-------TGCT----ATGG--A--ATAAAC-ATTTACAATC-TCTCTA-CAAAGAA--ACT---TCATCAT-ACA--CGGCAAAACTCA-------TGTA-AAA-----CATAGC----AAATGGTACA-GCTTCAC-CATA---TTTGTGTG-AACTATT-CAACTTCGGGG-A-GTCAGT--TA-ACAA---TA-CATCCAT-CGTGT-TGCGTTCAAGTTTAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTCT-AATAGAACTGTTTA-----------------TTCGGATGCAATC---ATATGGAATAGTATTCAACTTAGTA--TGAGAAACGCGTGT-TC----G-TTAAAC---GCTTTT--------GTAAGTTAT--TGCTTG-ATTTGGATAAA--AAGAAATTGGTATTAGAAATACATGTACTTCCAACAGCTTTATGCTTAATACATACCATACCGTCATTAGTTTTTGT--AAAA-GTAATATTTGATTTTTGT---TTGTTTTTGTATTGATTTTATTGT
gi|95810 : gaaaatttattgaag-TACGTTCAA---CAAA----TTA----ATTAAA----CTTTATCACT---CCA-AAACCCAA-CAGGGAATTATTCAAAGGTAGTT-TGTCCTACTCTGG---AATTTTAATCTGGAATAGTATACCAGTTAATA--TCAGAAAC
gi|95811 : -TC----GATCAAACT--GTTTTTCTACAAACGCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAAT-----------GTACATGTACCTCCAACAGCTATACGCTTAGTCAAAACCATACCGTAATTAGTTATTGT--ACAATAAAA-A-AAAA----TGT---TT-TGTTTCTATCGATTTTATTAT
Alignments
lowQualScore : 11111111111111111 111111111 1111111 1111111 111 1111 1111 11111111 11111
lowQualScore : 1 5 2 2 2 555 66 2 1 6666 5 33 1 0 1 2 44 66666 444 33 33 2 33333333333333333 2 33 66 88888 2 0 2 33 33 2 0 111111111 0 55 99999 8888888 5555 88888 2 6666666 1 33 0 2 5 33 2 9999999 2 88888 3 3 555 4 0 4 55 4 777 4 2 99 9999 3 6666 44 666 2 5555555 3 1 555 3 4 0 77 777 1 44 5 3 5555 3 1111 2 33333333 55 4 55 22222 66 5 0 5 5 0 888 5
lowQualScore : . . . . . ... .. . . .... . .. . . . . .. ..... ... .. .. . ................. . .. .. ..... . . . .. .. . . ......... . .. ..... ....... .... ..... . ....... . .. . . . .. . ....... . ..... . . ... . . . .. . ... . . .. .... . .... .. ... . ....... . . ... . . . .. ... . .. . . .... . .... . ........ .. . .. ..... .. . . . . . ... .
lowQualScore : 1 7 9 9 9 000 88 9 0 1111 7 99 1 8 1 7 44 77777 777 77 77 7 88888888888888888 7 77 33 11111 7 9 7 77 66 9 7 444444444 1 22 33333 7777777 7777 66666 7 3333333 9 77 5 7 3 77 7 3333333 9 33333 3 3 888 0 7 0 55 0 000 0 1 44 6666 1 5555 22 000 5 5555555 1 4 444 3 3 4 88 555 0 66 0 6 5555 6 0000 6 22222222 00 0 55 55555 99 0 1 0 0 5 888 0
consensus : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
Reference ( family-845 ) : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95794 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATATTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCAAATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCAAACCGTTGTTAGTTTTTG-----T--AAAC-ATAA-A-TAGATATTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95795 : ATATATCTGGCTATTATCAAAGGTAAAATATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAACTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGAAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGACT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TTA-----CATAGTAAATGGTACA-GCTCCGC-CATA---TTGATGTAAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTT-GAATAGTATTCCACTTAGTA--TAAGAAACGCGTGA-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAACAAATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA-TAGTTTTTG-----T--AAAA-ATCA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95796 : ATATATCTGGCTATTATCAAAGATAAAAGATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCACACATA----CAACCACATTTCA-ATTATTGA--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AGA---ATA--TAA--A-TAA---G--------T----TAAATT--AA--GCTGCAGAGGCAACAATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TGA-----CATTGCAAATGGTACA-GCTCCGC-CAAA---TTTGTGTGAACTATT-AAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCCTTCAAGCTCATA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTGT-AATAGAACTGTTTAAAGGTAGTC-TATCGTATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGC-TGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----TAAAAAA-ATAA-A-TTGATTTTTCT---TT-TATTTCTATCGATATTATTAT
gi|95797 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAATCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTT-AA-A--A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCA-----GAG---G-C-----------------------GAGCAT---------GCAAAT----ATATTT-----TA-------G--G----AAA-------TGAAT-ATG-------------AAAGATGAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GATCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGGTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TACCATTTTCGGGTGTAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATTAA--AGGAAATTGAAATAAGAAGTACAGGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTGTGATCG
gi|95798 : ATATATCTGGCTATTATCGATGGTAAAATATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAACGCTTGCATA----CAACCACATTTCA-ATTATTGT--TGAACAGTTTGGGGAAATACTTAAA-AT-ACAATGAAA---ATA--TAT--A-TAA---G--------T----T-------------TGCA----------TA-CAA-A--TA-TATTTTAGGAA-ATGAAAAT---------GAAAGTGTTAATGCTT-----CA-------TTCG----GAAG--A--GTGG-T-GTTT-------TCTCTATCAATCAA--A-TG-------------AATG-----------------TG----AA-----TATAGCAAATGGTACA-GCTTTGT-CATA---TTTGTTTGAATTATA-CAGCATCTGGGA-GTCACT--TA-ATAA---AACAGCCAT-CGTGTTGCGTTCAAGCTCAAAA---T-A----G--AATT-GTCTTAAT---T---CCA-AAACGCAG-AATATAAATGGTTAAATATAGTC-TACCATATTTGG-TGCAATT---ATATGAAATAGTATTCTATTTAGCA--TAAGAAACACGTTT-TC----G-TTAAAT---GCTTTT--------GCTAGACAT--TGATTG-ATTTGGATAAA--AGGAAAATAAAATTAGAAA-A-----ACCTGCAACAGTTATACACTTGATAAAAACCATACCTTGATTAG-TTTTG-----T--AAAATAT-----TTGCTTTTTGTTTGTT-TGTTTGTGTTGCTTTTATTAT
gi|95799 : ATATATATTGCTAT-ATCAAAGGTAAAAAATTATCTTTCCATT-AA-CCAT-AGAA-CGTTACA---T--TATAAA-GCATACATA----CAAGCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAT-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ACTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAAC-GCAA
gi|95800 : ATATATCAGGCTATTATTGAAGGTAAACGATTATAGTTCTATC-AA-CCGT-AGAA-CACTATA---T--TACAAA-GCTTATAAA----CAACCACATTTCA-ACT----T--TGT----TTTGGTGTA-TACTTTAA-AT-A-----AAA----TA--TAA--A-TAC---A--------------AA-GT--AC--ATT-CAT---TAAGCATG-CAA-A--TA-TATTTTAGGAA-ATTGATAA---------GAATGTCAAACTATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TCTCTATCGATCAA--ACTG-TGTTTC-T-GCAAAAGACAAAACTCATGTACATTGTA-TAA-----CGAAGAAAATGGTA------CCGC-CATA---TTTGT
gi|95801 : TATATCTGGATATTATCGAAGGTACAAGATTATTTTTCTATC-AA-CCAT-AGAA-CGTTAAC---T--TACAAA-GATTATATA----CAACCACATTTCA-ATTATTGC--TATACAGTTTTGGAAAATATTTCAA-AT-A-----AAA---GTA--TAA--C-TAA---G--------T----TAA-TA--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTTTATATATTT-----CA-------TTCA----AAAG--T--CTGAAT-ATTT-------TGTCTATCGATCAA--ACTG-TTTTTC-T-GCAAACGGCAGAACTTA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTTCGC-CATA---TTTGTGTGA
gi|95802 : TGTAGCCGGTTTTTATCGAAAGTAAAAGGTTGTTGTTCTACC-AA-CCAT-TGA-----TATACTTT--TGT-----TTTACATA----G---CTCA---CA-A------------GCAATTTGGGGCAAT---T--A-AT-G-----AAA---ATA--AAA--A--AT---G--------T----AAA-TTCAAA--ACTGCTTAGTCGAGCATA-CAA-A--TG-TATTTCAGGGA-CTCATTAT---------GAACGTCTAAATAGTT------A--------TAG----AAAA--AGCCTAAAT-GTTT-------TGTCTTTCTATCAA--ATAG-CTTTTCTT-ACCAA-GACAAA--TC---------GTA-T-A-----CAT-GC-AATAGTAAATGTCCCGT-TATA---CTTGCGTGAGATATT-TAA------TG----C---------------TACATCTAT-CATCTTGCGTTCAAGCTCAAA----T-T----T--AAATAGTTTT--------------AAACTTAA-AA
gi|95803 : TATTTGTGGCTATTAGCAAGAATGAAAACCTA-CATTCCATTAAA-TTAC-AGAATTGTT-TT---C--TATAAA-GCTAATATT----CAACCCCATCTAG-ATGATTGT--AACGTAATTTGGGGTAATA---CA-----A-----AAA---AGA--TAATCA-TAAACCG--------TCTCCTAA-T-------ATTGCAAAAGAGTGCATG-C-C-G--TATTATCTAAGGTG-ATCAATAT----------------TCAACATTTGCAGACA-------CTAT----GAAG------TTAATAATTTAATGCACTTTCCATTGATCAAAGAATA-TTTCTC-T--TAAA-AGCAAAATTTA-------TGTA-
gi|95803 : TACGTTCAA---CAAA----T-ATATTA--AA-----CTTAAT---CACACCA-AAACCCAA-CAGAGAATTTTTCAAAGGTAGTT-TATCCTAGTC---CGAAACTTTAATCTGAAATAGTATATCAGTTAATA--TCAGAAAC---TGT-ACTACAG-TCAAAA---G-TTTT--------ACAACAAATTATGTTCA-A--TGGTTACA--AACAGAATGAAaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatctacgttcaacaaatatattaaacttaatcacaccaaaacccaacagagaatttttcaaaggtagtttatcctagtccgaaactttaatctgaaatagtatatcagttaatatcagaaactgtactacagtcaaaagttttacaacaaattatgttcaatggttacaaacagaatgaa
gi|95804 : tatttgtggctattagcaagaatgaaaacctacattccattaaattacagaattgttttctataaagctaatattcaaccccatctagatgattgtaacgtaatttggggtaatacaaaaaagataatcataaaccgtctcctaatattgcaaaagagtgcatgccgtattatctaaggtgatcaatattcaacatttgcagacactatgaagttaataatttaatgcactttccattgatcaaagaatatttctcttaaaagcaaaatttatgtaaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatcATCTCTCTCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCGAAAACC------TAGAACTATTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATGAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAC-ATAA-A-TATATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95805 : TGGCTATTATCATGCATAAAAACCTA-CATTCCATT-AAATTAC-AGAA---TTATT---TCCTATAAA-GTTTATATT----TAACC-CAGTCTAGATTATTGT--AACGTAATTTGAGGTAATAC---AA-A--A-----AAG---ATA--AAC--A-TAAACCG--------T----CTC-TT--AAT-AATGCAAAAGAGTGCGTG-CCGCA--T--TATCCTAGGAG-ATCAATAT----------------TCAACATTTG----CA-------GACGCTATGAAGTTA--ATAAAT-GCAC-------TTTCCATTGATCAA--AGAA-TATTTC-T-CCAAAAAGCAAAATTTA-------TGTA-CAGAGTTTCAAAAAAAACAATGCA-CCTTCGTATATAACATTTGTTTAA--TACC-CA----TGGTAACGT---T--CGTAGAA---TAC------------TACGTTCAA---CAAA----T-G----A--AA-T-AACTTTATCACT---CCA-AAATCCAA-CAAGGGATTATTCAAAGGTAGTT-TGTC-TATTCTG-TGCTTTA---ATATGGAATATTATACCGGTTAATA--TCAGAAACA---GT-TCTACAG-CCAAAC---G-TTTT--------ACAACAAAT--TGT
gi|95806 : TGGCTATTATCAAAAATAAAAAA-CAACATTCCATTAAA-TTAC-AGAA-TG-AATT---TC-TATAAA-GCTTATATC----AAACCCTGTCTAAGATTATTGTAACGTA-AG-TTGGGG-------TC-------------AA---ACA--TAA--ACT-----G--------T----CTC-TT--AAATATTGCAAAA--AAGCATGTCTT-A--T--TATCGTATGTA-ATCAATAT---------TCAA--CATCA-ATTT-----TACAGACGCTTTG-----AAGTTA--ATAAAT-ACAT-------TTTCCATTGATCAA--ATAA-TATTTC-T-CCAAAAAACAAAATTTA-------TGTA-CA
gi|95806 : GTTCAA---CAAAAGATT-T----A--AATT-GTATC-AC---T---TCA-AAACCAAG-TATGGAATTGTTCAAAGGTAGTT-TGTCCTCTCTGG----AACTTTAATCTGGAATAGTATATCGGTTAATA--TAAAAAAgagtttgaaaaacaaaccatcttcgtatataaaaaaacatgtgtaatacccatgataacgttcgtaaaatctatgttcaacaaaagatttaaattgtatcacttcaaaaccaagtatggaattgttcaaaggtagtttgtcctctctggaactttaatctggaatagtatatcggttaatataaaaaa
gi|95807 : tggctattatcaaaaataaaaaacaacattccattaaattacagaatgaatttctataaagcttatatcaaaccctgtctaagattattgtaacgtaagttggggtcaaacataaactgtctcttaaatattgcaaaaaagcatgtcttattatcgtatgtaatcaatattcaacatcaattttacagacgctttgaagttaataaatacattttccattgatcaaataatatttctccaaaaaacaaaatttatgtacagagtttgaaaaacaaaccatcttcgtatataaaaaaacatgtgtaatacccatgataacgttcgtaaaatctatATTTTCTTTCC-CC-GG-ATATGAAAA-TACTTTA---T--TATAAG-GCATACATAATGTCTACCA-A---CG-ATTACTGC--TATACCATTTGGGGACTTACTTC----C-A-----AAACTGACA--CAA--A-TAA---G--------A----TAC-TT--AA--AATACAAAATAGAGC-CG-CAA-A--
gi|95808 : AAATATATCAATATTA-----AAA---ACAGTTAA--A-CAA---AAAGGACAAC----TAC-TT--AA--GCCGCATAGAAGAGTATG-TAA-AATTA-TAC---AAAAATATCAATATCTTAGTCTAGAAAACCAT-ATATCT-----CT-------TT-------AAA--A--CTG-------C-------TGTCTTTTGATAAA--AGCGATTTTTA-TCAAAAACAACAAAGTT-A-------TGAACTAA------ATAGTTAATGGAACG-TCTCCGG-CATA---TTCAAACGAATTGTTTCAAAT---GAGA-ACGAATGACG-AGAAAGTTGCATTAATACGT-TTAAGGTCAATTTCAAA----C-A----G--AAA----CTTTAT---TAAATCA-AAACCTAATAAT-GAAATGTTTAAAAGAAGGCTTATCATATCCTGAAGCAAAA---ATACGAAACGCCACTCCACTT-GTAATTACG-AATGC-TGTATA----T-TTAAACAAAGTCTCT-----------AATGAA--TACATGAATTTGGGTAAAATACAAAAGTAGGATTA-AAATA
gi|95809 : ATTG-----CA-------TGCT----ATGG--A--ATAAAC-ATTTACAATC-TCTCTA-CAAAGAA--ACT---TCATCAT-ACA--CGGCAAAACTCA-------TGTA-AAA-----CATAGCAAATGGTACA-GCTTCAC-CATA---TTTGTGTGAACTATT-CAACTTCGGGGA-GTCAGT--TA-ACAA---TACATCCAT-CGTGTTGCGTTCAAGTTTAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTCT-AATAGAACTGTTTA-----------------TTCGGATGCAATC---ATATGGAATAGTATTCAACTTAGTA--TGAGAAACGCGTGT-TC----G-TTAAAC---GCTTTT--------GTAAGTTAT--TGCTTG-ATTTGGATAAA--AAGAAATTGGTATTAGAAATACATGTACTTCCAACAGCTTTATGCTTAATACATACCATACCGTCATTAGTTTTTG-----T--AAAA-GTAATATTTGATTTTTGT---TTGTTTTTGTATTGATTTTATTGT
gi|95810 : gaaaatttattgaagTACGTTCAA---CAAA----TTA----ATTAAA----CTTTATCACT---CCA-AAACCCAA-CAGGGAATTATTCAAAGGTAGTT-TGTCCTACTCTGG---AATTTTAATCTGGAATAGTATACCAGTTAATA--TCAGAAAC
gi|95811 : -TC----GATCAAACT--GTTTTTCTACAAACGCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAAT-----------GTACATGTACCTCCAACAGCTATACGCTTAGTCAAAACCATACCGTAATTAGTTATTGTACAAT--AAAA-AAAA-A---------TGT---TT-TGTTTCTATCGATTTTATTAT
Alignments
lowQualScore : 11111111111111111 111111111 1111111 1111111 111 1111 1111 11111111 11111
lowQualScore : 1 5 2 2 2 555 66 2 1 6666 5 33 1 0 1 2 44 66666 444 33 33 2 33333333333333333 2 33 66 88888 2 0 2 33 33 2 0 111111111 0 55 99999 8888888 5555 88888 2 6666666 1 33 0 2 5 33 2 9999999 2 88888 3 3 555 4 0 4 55 4 777 4 2 99 9999 3 6666 44 666 2 5555555 3 1 555 3 4 0 77 777 1 44 5 3 5555 3 1111 2 33333333 55 4 55 22222 66 5 0 5 5 0 888 5
lowQualScore : . . . . . ... .. . . .... . .. . . . . .. ..... ... .. .. . ................. . .. .. ..... . . . .. .. . . ......... . .. ..... ....... .... ..... . ....... . .. . . . .. . ....... . ..... . . ... . . . .. . ... . . .. .... . .... .. ... . ....... . . ... . . . .. ... . .. . . .... . .... . ........ .. . .. ..... .. . . . . . ... .
lowQualScore : 1 7 9 9 9 000 88 9 0 1111 7 99 1 8 1 7 44 77777 777 77 77 7 88888888888888888 7 77 33 11111 7 9 7 77 66 9 7 444444444 1 22 33333 7777777 7777 66666 7 3333333 9 77 5 7 3 77 7 3333333 9 33333 3 3 888 0 7 0 55 0 000 0 1 44 6666 1 5555 22 000 5 5555555 1 4 444 3 3 4 88 555 0 66 0 6 5555 6 0000 6 22222222 00 0 55 55555 99 0 1 0 0 5 888 0
consensus : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
Reference ( family-845 ) : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95794 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATATTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCAAATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCAAACCGTTGTTAGTTTTTG-----T--AAAC-ATAA-A-TAGATATTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95795 : ATATATCTGGCTATTATCAAAGGTAAAATATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAACTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGAAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGACT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TTA-----CATAGTAAATGGTACA-GCTCCGC-CATA---TTGATGTAAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTT-GAATAGTATTCCACTTAGTA--TAAGAAACGCGTGA-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAACAAATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA-TAGTTTTTG-----T--AAAA-ATCA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95796 : ATATATCTGGCTATTATCAAAGATAAAAGATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCACACATA----CAACCACATTTCA-ATTATTGA--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AGA---ATA--TAA--A-TAA---G--------T----TAAATT--AA--GCTGCAGAGGCAACAATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TGA-----CATTGCAAATGGTACA-GCTCCGC-CAAA---TTTGTGTGAACTATT-AAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCCTTCAAGCTCATA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTGT-AATAGAACTGTTTAAAGGTAGTC-TATCGTATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGC-TGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----TAAAAAA-ATAA-A-TTGATTTTTCT---TT-TATTTCTATCGATATTATTAT
gi|95797 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAATCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTT-AA-A--A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCA-----GAG---G-C-----------------------GAGCAT---------GCAAAT----ATATTT-----TA-------G--G----AAA-------TGAAT-ATG-------------AAAGATGAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GATCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGGTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TACCATTTTCGGGTGTAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATTAA--AGGAAATTGAAATAAGAAGTACAGGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTGTGATCG
gi|95798 : ATATATCTGGCTATTATCGATGGTAAAATATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAACGCTTGCATA----CAACCACATTTCA-ATTATTGT--TGAACAGTTTGGGGAAATACTTAAA-AT-ACAATGAAA---ATA--TAT--A-TAA---G--------T----T-------------TGCA----------TA-CAA-A--TA-TATTTTAGGAA-ATGAAAAT---------GAAAGTGTTAATGCTT-----CA-------TTCG----GAAG--A--GTGG-T-GTTT-------TCTCTATCAATCAA--A-TG-------------AATG-----------------TG----AA-----TATAGCAAATGGTACA-GCTTTGT-CATA---TTTGTTTGAATTATA-CAGCATCTGGGA-GTCACT--TA-ATAA---AACAGCCAT-CGTGTTGCGTTCAAGCTCAAAA---T-A----G--AATT-GTCTTAAT---T---CCA-AAACGCAG-AATATAAATGGTTAAATATAGTC-TACCATATTTGG-TGCAATT---ATATGAAATAGTATTCTATTTAGCA--TAAGAAACACGTTT-TC----G-TTAAAT---GCTTTT--------GCTAGACAT--TGATTG-ATTTGGATAAA--AGGAAAATAAAATTAGAAA-A-----ACCTGCAACAGTTATACACTTGATAAAAACCATACCTTGATTAG-TTTTG-----T--AAAATAT-----TTGCTTTTTGTTTGTT-TGTTTGTGTTGCTTTTATTAT
gi|95799 : ATATATATTGCTAT-ATCAAAGGTAAAAAATTATCTTTCCATT-AA-CCAT-AGAA-CGTTACA---T--TATAAA-GCATACATA----CAAGCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAT-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ACTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAAC-GCAA
gi|95800 : ATATATCAGGCTATTATTGAAGGTAAACGATTATAGTTCTATC-AA-CCGT-AGAA-CACTATA---T--TACAAA-GCTTATAAA----CAACCACATTTCA-ACT----T--TGT----TTTGGTGTA-TACTTTAA-AT-A-----AAA----TA--TAA--A-TAC---A--------------AA-GT--AC--ATT-CAT---TAAGCATG-CAA-A--TA-TATTTTAGGAA-ATTGATAA---------GAATGTCAAACTATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TCTCTATCGATCAA--ACTG-TGTTTC-T-GCAAAAGACAAAACTCATGTACATTGTA-TAA-----CGAAGAAAATGGTA------CCGC-CATA---TTTGT
gi|95801 : TATATCTGGATATTATCGAAGGTACAAGATTATTTTTCTATC-AA-CCAT-AGAA-CGTTAAC---T--TACAAA-GATTATATA----CAACCACATTTCA-ATTATTGC--TATACAGTTTTGGAAAATATTTCAA-AT-A-----AAA---GTA--TAA--C-TAA---G--------T----TAA-TA--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTTTATATATTT-----CA-------TTCA----AAAG--T--CTGAAT-ATTT-------TGTCTATCGATCAA--ACTG-TTTTTC-T-GCAAACGGCAGAACTTA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTTCGC-CATA---TTTGTGTGA
gi|95802 : TGTAGCCGGTTTTTATCGAAAGTAAAAGGTTGTTGTTCTACC-AA-CCAT-TGA-----TATACTTT--TGT-----TTTACATA----G---CTCA---CA-A------------GCAATTTGGGGCAAT---T--A-AT-G-----AAA---ATA--AAA--A--AT---G--------T----AAA-TTCAAA--ACTGCTTAGTCGAGCATA-CAA-A--TG-TATTTCAGGGA-CTCATTAT---------GAACGTCTAAATAGTT------A--------TAG----AAAA--AGCCTAAAT-GTTT-------TGTCTTTCTATCAA--ATAG-CTTTTCTT-ACCAA-GACAAA--TC---------GTA-T-A-----CAT-GC-AATAGTAAATGTCCCGT-TATA---CTTGCGTGAGATATT-TAA------TG----C---------------TACATCTAT-CATCTTGCGTTCAAGCTCAAA----T-T----T--AAATAGTTTT--------------AAACTTAA-AA
gi|95803 : TATTTGTGGCTATTAGCAAGAATGAAAACCTA-CATTCCATTAAA-TTAC-AGAATTGTT-TT---C--TATAAA-GCTAATATT----CAACCCCATCTAG-ATGATTGT--AACGTAATTTGGGGTAATA---CA-----A-----AAA---AGA--TAATCA-TAAACCG--------TCTCCTAA-T-------ATTGCAAAAGAGTGCATG-C-C-G--TATTATCTAAGGTG-ATCAATAT----------------TCAACATTTGCAGACA-------CTAT----GAAG------TTAATAATTTAATGCACTTTCCATTGATCAAAGAATA-TTTCTC-T--TAAA-AGCAAAATTTA-------TGTA-
gi|95803 : TACGTTCAA---CAAA----T-ATATTA--AA-----CTTAAT---CACACCA-AAACCCAA-CAGAGAATTTTTCAAAGGTAGTT-TATCCTAGTC---CGAAACTTTAATCTGAAATAGTATATCAGTTAATA--TCAGAAAC---TGT-ACTACAG-TCAAAA---G-TTTT--------ACAACAAATTATGTTCA-A--TGGTTACA--AACAGAATGAAaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatctacgttcaacaaatatattaaacttaatcacaccaaaacccaacagagaatttttcaaaggtagtttatcctagtccgaaactttaatctgaaatagtatatcagttaatatcagaaactgtactacagtcaaaagttttacaacaaattatgttcaatggttacaaacagaatgaa
gi|95804 : tatttgtggctattagcaagaatgaaaacctacattccattaaattacagaattgttttctataaagctaatattcaaccccatctagatgattgtaacgtaatttggggtaatacaaaaaagataatcataaaccgtctcctaatattgcaaaagagtgcatgccgtattatctaaggtgatcaatattcaacatttgcagacactatgaagttaataatttaatgcactttccattgatcaaagaatatttctcttaaaagcaaaatttatgtaaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatcATCTCTCTCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCGAAAACC------TAGAACTATTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATGAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAC-ATAA-A-TATATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95805 : TGGCTATTATCATGCATAAAAACCTA-CATTCCATT-AAATTAC-AGAA---TTATT---TCCTATAAA-GTTTATATT----TAACC-CAGTCTAGATTATTGT--AACGTAATTTGAGGTAATAC---AA-A--A-----AAG---ATA--AAC--A-TAAACCG--------T----CTC-TT--AAT-AATGCAAAAGAGTGCGTG-CCGCA--T--TATCCTAGGAG-ATCAATAT----------------TCAACATTTG----CA-------GACGCTATGAAGTTA--ATAAAT-GCAC-------TTTCCATTGATCAA--AGAA-TATTTC-T-CCAAAAAGCAAAATTTA-------TGTA-CAGAGTTTCAAAAAAAACAATGCA-CCTTCGTATATAACATTTGTTTAA--TACC-CA----TGGTAACGT---T--CGTAGAA---TAC------------TACGTTCAA---CAAA----T-G----A--AA-T-AACTTTATCACT---CCA-AAATCCAA-CAAGGGATTATTCAAAGGTAGTT-TGTC-TATTCTG-TGCTTTA---ATATGGAATATTATACCGGTTAATA--TCAGAAACA---GT-TCTACAG-CCAAAC---G-TTTT--------ACAACAAAT--TGT
gi|95806 : TGGCTATTATCAAAAATAAAAAA-CAACATTCCATTAAA-TTAC-AGAA-TG-AATT---TC-TATAAA-GCTTATATC----AAACCCTGTCTAAGATTATTGTAACGTA-AG-TTGGGG-------TC-------------AA---ACA--TAA--ACT-----G--------T----CTC-TT--AAATATTGCAAAA--AAGCATGTCTT-A--T--TATCGTATGTA-ATCAATAT---------TCAA--CATCA-ATTT-----TACAGACGCTTTG-----AAGTTA--ATAAAT-ACAT-------TTTCCATTGATCAA--ATAA-TATTTC-T-CCAAAAAACAAAATTTA-------TGTA-CA
gi|95806 : GTTCAA---CAAAAGATT-T----A--AATT-GTATC-AC---T---TCA-AAACCAAG-TATGGAATTGTTCAAAGGTAGTT-TGTCCTCTCTGG----AACTTTAATCTGGAATAGTATATCGGTTAATA--TAAAAAAgagtttgaaaaacaaaccatcttcgtatataaaaaaacatgtgtaatacccatgataacgttcgtaaaatctatgttcaacaaaagatttaaattgtatcacttcaaaaccaagtatggaattgttcaaaggtagtttgtcctctctggaactttaatctggaatagtatatcggttaatataaaaaa
gi|95807 : tggctattatcaaaaataaaaaacaacattccattaaattacagaatgaatttctataaagcttatatcaaaccctgtctaagattattgtaacgtaagttggggtcaaacataaactgtctcttaaatattgcaaaaaagcatgtcttattatcgtatgtaatcaatattcaacatcaattttacagacgctttgaagttaataaatacattttccattgatcaaataatatttctccaaaaaacaaaatttatgtacagagtttgaaaaacaaaccatcttcgtatataaaaaaacatgtgtaatacccatgataacgttcgtaaaatctatATTTTCTTTCC-CC-GG-ATATGAAAA-TACTTTA---T--TATAAG-GCATACATAATGTCTACCA-A---CG-ATTACTGC--TATACCATTTGGGGACTTACTTC----C-A-----AAACTGACA--CAA--A-TAA---G--------A----TAC-TT--AA--AATACAAAATAGAGC-CG-CAA-A--
gi|95808 : AAATATATCAATATTA-----AAA---ACAGTTAA--A-CAA---AAAGGACAAC----TAC-TT--AA--GCCGCATAGAAGAGTATG-TAA-AATTA-TAC---AAAAATATCAATATCTTAGTCTAGAAAACCAT-ATATCT-----CT-------TT-------AAA--A--CTG-------C-------TGTCTTTTGATAAA--AGCGATTTTTA-TCAAAAACAACAAAGTT-A-------TGAACTAA------ATAGTTAATGGAACG-TCTCCGG-CATA---TTCAAACGAATTGTTTCAAAT---GAGA-ACGAATGACG-AGAAAGTTGCATTAATACGT-TTAAGGTCAATTTCAAA----C-A----G--AAA----CTTTAT---TAAATCA-AAACCTAATAAT-GAAATGTTTAAAAGAAGGCTTATCATATCCTGAAGCAAAA---ATACGAAACGCCACTCCACTT-GTAATTACG-AATGC-TGTATA----T-TTAAACAAAGTCTCT-----------AATGAA--TACATGAATTTGGGTAAAATACAAAAGTAGGATTA-AAATA
gi|95809 : ATTG-----CA-------TGCT----ATGG--A--ATAAAC-ATTTACAATC-TCTCTA-CAAAGAA--ACT---TCATCAT-ACA--CGGCAAAACTCA-------TGTA-AAA-----CATAGCAAATGGTACA-GCTTCAC-CATA---TTTGTGTGAACTATT-CAACTTCGGGGA-GTCAGT--TA-ACAA---TACATCCAT-CGTGTTGCGTTCAAGTTTAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTCT-AATAGAACTGTTTA-----------------TTCGGATGCAATC---ATATGGAATAGTATTCAACTTAGTA--TGAGAAACGCGTGT-TC----G-TTAAAC---GCTTTT--------GTAAGTTAT--TGCTTG-ATTTGGATAAA--AAGAAATTGGTATTAGAAATACATGTACTTCCAACAGCTTTATGCTTAATACATACCATACCGTCATTAGTTTTTG-----T--AAAA-GTAATATTTGATTTTTGT---TTGTTTTTGTATTGATTTTATTGT
gi|95810 : gaaaatttattgaagTACGTTCAA---CAAA----TTA----ATTAAA----CTTTATCACT---CCA-AAACCCAA-CAGGGAATTATTCAAAGGTAGTT-TGTCCTACTCTGG---AATTTTAATCTGGAATAGTATACCAGTTAATA--TCAGAAAC
gi|95811 : -TC----GATCAAACT--GTTTTTCTACAAACGCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAAT-----------GTACATGTACCTCCAACAGCTATACGCTTAGTCAAAACCATACCGTAATTAGTTATTGTACAAT--AAAA-AAAA-A---------TGT---TT-TGTTTCTATCGATTTTATTAT
blockSeqs : A A A G T CTT CC C A ATGT G AA A C T TT CAATG CTG GT TC C AAAGGACAAC A CA AT GAGGC T C AT AT T CTTAGTCTA TT GCAGA CAGACGC CTAT AGC A AATGCAC A AG A T CA C TGTACAT C AGTTT T A ACA T C GA T AGT A A GC AGAT T TATT TT ATA T CACA A T ATA T A GT TTA T AT G A TACA A CAAA T CTACAAAC TA A AT TACAA AA T T T TTG G
blockSeqs : A A . . . . C . A . G . A C . T . . . . . ACCGTCTCC . . T GAGGC . . . A . . TT G . . TTA . ACAATC A . . A A C . . . . . . . . . . . . A GC A . . . AT T CACT . T GA . G GT TTA T . G . TACA . CT T . . . . . . . . . . .
blockSeqs : A . . . . . . . A . . . A A . T . . . . . ACCGT . . . GAGGC . . . A . . TA . . . TTA . . C . . . A C . . . . . . . . . . . . A GG . . . . AT T TAAA . T TA . A GT TTA T . G . . . T T . . . . . . . . . . .
blockSeqs : G . . . . . . . T . . . A C . T . . . . . GT . . . GAGGC . . . A . . TT . . . A . . A . . . A T . . . . . . . . . . . . G GC . . . . AT A CACT . C GA . A GT . A . G . . . T C . . . . . . . . . . .
blockSeqs : A . . . . . . . A . . . A T . T . . . . . GT . . . TAGTC . . . A . . AA . . . A . . C . . . A C . . . . . . . . . . . . A GC . . . . TT A T . T GA . C AA . C . G . . . T T . . . . . . . . . . .
blockSeqs : G . . . . . . . T . . . T C . T . . . . . GT . . . AAAGA . . . A . . AT . . . A . . G . . . G A . . . . . . . . . . . . A GC . . . . AT T T . C AA . A AT . T . . . . . T T . . . . . . . . . . .
blockSeqs : G . . . . . . . T . . . A C . T . . . . . GT . . . GAGGC . . . A . . AA . . . A . . G . . . G C . . . . . . . . . . . . G TT . . . . TT T T . C AC . C T . A . . . . . A C . . . . . . . . . . .
blockSeqs : G . . . . . . . T . . . C C . T . . . . . GT . . . AAAGA . . . G . . CA . . . A . . T . . . A C . . . . . . . . . . . . G GT . . . . AT T T . A AC . A C . C . . . . . T T . . . .
blockSeqs : A . . . . . . . T . . . T C . T . . . . . GT . . . AAATA . . . A . . TT . . . T . . A . . . A A . . . . . . . . . . . . . . . . . . T T T . T GT . C T . A . . . . . C . . . . .
blockSeqs : A . . . . . . . A . . . A C . C . . . . . GT . . . TAGAA . . . A . . CA . . . A . . T . . . C A . . . . . . . . . . . A T T . T TA . . G . A . . . . C . . .
blockSeqs : A . . . . . . . T . . . T C . . . . . . . GT . . . AAA . . . . . . TC . . . A . . T . . . C C . . . . . . . . . . . A . T . C AC . . . . C .
blockSeqs : A . . . . . . . T . . . A . . . . . . . . GT . . . TT . . . . . . T . . . A . . G . . . A C . . . . . . . . . . . . .
blockSeqs : . . . . . . . A . . . A . . . . . . . . GA . . . . . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . A . . . . . . . . . . . . . . . . . . .
blockSeqCons :
originalCons : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
finalCons : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
Alignments
lowQualScore : 11111111111111111 111111111 1111111 1111111 111 1111 1111 11111111 11111
lowQualScore : 1 5 2 2 2 555 66 2 1 6666 5 33 1 0 1 2 44 66666 444 33 33 2 33333333333333333 2 33 66 88888 2 0 2 33 33 2 0 111111111 0 55 99999 8888888 5555 88888 2 6666666 1 33 0 2 5 33 2 9999999 2 88888 3 3 555 4 0 4 55 4 777 4 2 99 9999 3 6666 44 666 2 5555555 3 1 555 3 4 0 77 777 1 44 5 3 5555 3 1111 2 33333333 55 4 55 22222 66 5 0 5 5 0 888 5
lowQualScore : . . . . . ... .. . . .... . .. . . . . .. ..... ... .. .. . ................. . .. .. ..... . . . .. .. . . ......... . .. ..... ....... .... ..... . ....... . .. . . . .. . ....... . ..... . . ... . . . .. . ... . . .. .... . .... .. ... . ....... . . ... . . . .. ... . .. . . .... . .... . ........ .. . .. ..... .. . . . . . ... .
lowQualScore : 1 7 9 9 9 000 88 9 0 1111 7 99 1 8 1 7 44 77777 777 77 77 7 88888888888888888 7 77 33 11111 7 9 7 77 66 9 7 444444444 1 22 33333 7777777 7777 66666 7 3333333 9 77 5 7 3 77 7 3333333 9 33333 3 3 888 0 7 0 55 0 000 0 1 44 6666 1 5555 22 000 5 5555555 1 4 444 3 3 4 88 555 0 66 0 6 5555 6 0000 6 22222222 00 0 55 55555 99 0 1 0 0 5 888 0
consensus : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
Reference ( family-845 ) : ATATATCTGGCTATTATCGAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCNTACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTNATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TNTCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTGTGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CGTGTTGCGTTCAAGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATNTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAC---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95794 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATATTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCAAATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCAAACCGTTGTTAGTTTTTG-----T--AAAC-ATAA-A-TAGATATTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95795 : ATATATCTGGCTATTATCAAAGGTAAAATATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAACTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGAAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGACT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TTA-----CATAGTAAATGGTACA-GCTCCGC-CATA---TTGATGTAAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTT-GAATAGTATTCCACTTAGTA--TAAGAAACGCGTGA-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAACAAATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTA-TAGTTTTTG-----T--AAAA-ATCA-A-TTGATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95796 : ATATATCTGGCTATTATCAAAGATAAAAGATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAA-GCACACATA----CAACCACATTTCA-ATTATTGA--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AGA---ATA--TAA--A-TAA---G--------T----TAAATT--AA--GCTGCAGAGGCAACAATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TGA-----CATTGCAAATGGTACA-GCTCCGC-CAAA---TTTGTGTGAACTATT-AAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCCTTCAAGCTCATA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTGT-AATAGAACTGTTTAAAGGTAGTC-TATCGTATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGC-TGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----TAAAAAA-ATAA-A-TTGATTTTTCT---TT-TATTTCTATCGATATTATTAT
gi|95797 : ATATATCTGGCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAATCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTT-AA-A--A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCA-----GAG---G-C-----------------------GAGCAT---------GCAAAT----ATATTT-----TA-------G--G----AAA-------TGAAT-ATG-------------AAAGATGAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GATCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGGTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTAG-AATAGAACTGTTTAAAGGTAGTC-TACCATTTTCGGGTGTAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATTAA--AGGAAATTGAAATAAGAAGTACAGGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAA-ATAA-A-TTGATTTTTGT---TT-TGTTGTGATCG
gi|95798 : ATATATCTGGCTATTATCGATGGTAAAATATTATCTTTCTATC-AA-CCAT-AGAA-CGTTATA---T--TACAAACGCTTGCATA----CAACCACATTTCA-ATTATTGT--TGAACAGTTTGGGGAAATACTTAAA-AT-ACAATGAAA---ATA--TAT--A-TAA---G--------T----T-------------TGCA----------TA-CAA-A--TA-TATTTTAGGAA-ATGAAAAT---------GAAAGTGTTAATGCTT-----CA-------TTCG----GAAG--A--GTGG-T-GTTT-------TCTCTATCAATCAA--A-TG-------------AATG-----------------TG----AA-----TATAGCAAATGGTACA-GCTTTGT-CATA---TTTGTTTGAATTATA-CAGCATCTGGGA-GTCACT--TA-ATAA---AACAGCCAT-CGTGTTGCGTTCAAGCTCAAAA---T-A----G--AATT-GTCTTAAT---T---CCA-AAACGCAG-AATATAAATGGTTAAATATAGTC-TACCATATTTGG-TGCAATT---ATATGAAATAGTATTCTATTTAGCA--TAAGAAACACGTTT-TC----G-TTAAAT---GCTTTT--------GCTAGACAT--TGATTG-ATTTGGATAAA--AGGAAAATAAAATTAGAAA-A-----ACCTGCAACAGTTATACACTTGATAAAAACCATACCTTGATTAG-TTTTG-----T--AAAATAT-----TTGCTTTTTGTTTGTT-TGTTTGTGTTGCTTTTATTAT
gi|95799 : ATATATATTGCTAT-ATCAAAGGTAAAAAATTATCTTTCCATT-AA-CCAT-AGAA-CGTTACA---T--TATAAA-GCATACATA----CAAGCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAT-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ACTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAAC-GCAA
gi|95800 : ATATATCAGGCTATTATTGAAGGTAAACGATTATAGTTCTATC-AA-CCGT-AGAA-CACTATA---T--TACAAA-GCTTATAAA----CAACCACATTTCA-ACT----T--TGT----TTTGGTGTA-TACTTTAA-AT-A-----AAA----TA--TAA--A-TAC---A--------------AA-GT--AC--ATT-CAT---TAAGCATG-CAA-A--TA-TATTTTAGGAA-ATTGATAA---------GAATGTCAAACTATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TCTCTATCGATCAA--ACTG-TGTTTC-T-GCAAAAGACAAAACTCATGTACATTGTA-TAA-----CGAAGAAAATGGTA------CCGC-CATA---TTTGT
gi|95801 : TATATCTGGATATTATCGAAGGTACAAGATTATTTTTCTATC-AA-CCAT-AGAA-CGTTAAC---T--TACAAA-GATTATATA----CAACCACATTTCA-ATTATTGC--TATACAGTTTTGGAAAATATTTCAA-AT-A-----AAA---GTA--TAA--C-TAA---G--------T----TAA-TA--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTTTATATATTT-----CA-------TTCA----AAAG--T--CTGAAT-ATTT-------TGTCTATCGATCAA--ACTG-TTTTTC-T-GCAAACGGCAGAACTTA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTTCGC-CATA---TTTGTGTGA
gi|95802 : TGTAGCCGGTTTTTATCGAAAGTAAAAGGTTGTTGTTCTACC-AA-CCAT-TGA-----TATACTTT--TGT-----TTTACATA----G---CTCA---CA-A------------GCAATTTGGGGCAAT---T--A-AT-G-----AAA---ATA--AAA--A--AT---G--------T----AAA-TTCAAA--ACTGCTTAGTCGAGCATA-CAA-A--TG-TATTTCAGGGA-CTCATTAT---------GAACGTCTAAATAGTT------A--------TAG----AAAA--AGCCTAAAT-GTTT-------TGTCTTTCTATCAA--ATAG-CTTTTCTT-ACCAA-GACAAA--TC---------GTA-T-A-----CAT-GC-AATAGTAAATGTCCCGT-TATA---CTTGCGTGAGATATT-TAA------TG----C---------------TACATCTAT-CATCTTGCGTTCAAGCTCAAA----T-T----T--AAATAGTTTT--------------AAACTTAA-AA
gi|95803 : TATTTGTGGCTATTAGCAAGAATGAAAACCTA-CATTCCATTAAA-TTAC-AGAATTGTT-TT---C--TATAAA-GCTAATATT----CAACCCCATCTAG-ATGATTGT--AACGTAATTTGGGGTAATA---CA-----A-----AAA---AGA--TAATCA-TAAACCG--------TCTCCTAA-T-------ATTGCAAAAGAGTGCATG-C-C-G--TATTATCTAAGGTG-ATCAATAT----------------TCAACATTTGCAGACA-------CTAT----GAAG------TTAATAATTTAATGCACTTTCCATTGATCAAAGAATA-TTTCTC-T--TAAA-AGCAAAATTTA-------TGTA-
gi|95803 : TACGTTCAA---CAAA----T-ATATTA--AA-----CTTAAT---CACACCA-AAACCCAA-CAGAGAATTTTTCAAAGGTAGTT-TATCCTAGTC---CGAAACTTTAATCTGAAATAGTATATCAGTTAATA--TCAGAAAC---TGT-ACTACAG-TCAAAA---G-TTTT--------ACAACAAATTATGTTCA-A--TGGTTACA--AACAGAATGAAaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatctacgttcaacaaatatattaaacttaatcacaccaaaacccaacagagaatttttcaaaggtagtttatcctagtccgaaactttaatctgaaatagtatatcagttaatatcagaaactgtactacagtcaaaagttttacaacaaattatgttcaatggttacaaacagaatgaa
gi|95804 : tatttgtggctattagcaagaatgaaaacctacattccattaaattacagaattgttttctataaagctaatattcaaccccatctagatgattgtaacgtaatttggggtaatacaaaaaagataatcataaaccgtctcctaatattgcaaaagagtgcatgccgtattatctaaggtgatcaatattcaacatttgcagacactatgaagttaataatttaatgcactttccattgatcaaagaatatttctcttaaaagcaaaatttatgtaaagagtttcaaaatacaatgcaccttcgtatataacagatatgtttaatttgtagaaatcATCTCTCTCTATTATCAAAGGTAAAAGATTATCTTTCCATC-AA-CCAT-AGAA-CGTTATA---T--TATAAA-GCATACATA----CAACCACATTTCA-ATTATTGT--TGTACAGTTTGGGGAAATACTTCAA-AT-A-----AAA---ATA--TAA--A-TAA---G--------T----TAA-TT--AA--ACTGCAGAGGCGAGCATG-CAA-A--TA-TATTTTAGGAA-ATGAATAT---------GAAAGTCTTTATATTT-----CA-------TTCG----AAAG--A--CTGAAT-ATTT-------TATCTATCGATCAA--ACTG-TTTTTC-T-ACAAACGGCAAAACTCA-------TGTA-TAA-----CATAGCAAATGGTACA-GCTCCGC-CATA---TTTATGTGAACTATT-CAACTTCGGTGA-GTCAAT--CA-ATAA---TACATCCAT-CATGTTGCGTTCACGCTCAAA----T-A----A--AAAT-GTCTTTAT---T---CCGAAAACC------TAGAACTATTTAAAGGTAGTC-TATCATATTCGGGTGCAATT---ATTTGGAATAGTATTCCACTTAGTA--TAAGAAACGCGTGT-TC----G-TTAAAT---GTTTTT--------GCAAGTAAT--TGTTTG-ATTTGGATGAA--AGGAAATTGAAATTAGAAATACATGTACCTCCAACAGCCATATGCTTAATAAATACCATACCGTTATTAGTTTTTG-----T--AAAC-ATAA-A-TATATTTTTGT---TT-TGTTTCTATCGATTTTATTAT
gi|95805 : TGGCTATTATCATGCATAAAAACCTA-CATTCCATT-AAATTAC-AGAA---TTATT---TCCTATAAA-GTTTATATT----TAACC-CAGTCTAGATTATTGT--AACGTAATTTGAGGTAATAC---AA-A--A-----AAG---ATA--AAC--A-TAAACCG--------T----CTC-TT--AAT-AATGCAAAAGAGTGCGTG-CCGCA--T--TATCCTAGGAG-ATCAATAT----------------TCAACATTTG----CA-------GACGCTATGAAGTTA--ATAAAT-GCAC-------TTTCCATTGATCAA--AGAA-TATTTC-T-CCAAAAAGCAAAATTTA-------TGTA-CAGAGTTTCAAAAAAAACAATGCA-CCTTCGTATATAACATTTGTTTAA--TACC-CA----TGGTAACGT---T--CGTAGAA---TAC------------TACGTTCAA---CAAA----T-G----A--AA-T-AACTTTATCACT---CCA-AAATCCAA-CAAGGGATTATTCAAAGGTAGTT-TGTC-TATTCTG-TGCTTTA---ATATGGAATATTATACCGGTTAATA--TCAGAAACA---GT-TCTACAG-CCAAAC---G-TTTT--------ACAACAAAT--TGT
gi|95806 : TGGCTATTATCAAAAATAAAAAA-CAACATTCCATTAAA-TTAC-AGAA-TG-AATT---TC-TATAAA-GCTTATATC----AAACCCTGTCTAAGATTATTGTAACGTA-AG-TTGGGG-------TC-------------AA---ACA--TAA--ACT-----G--------T----CTC-TT--AAATATTGCAAAA--AAGCATGTCTT-A--T--TATCGTATGTA-ATCAATAT---------TCAA--CATCA-ATTT-----TACAGACGCTTTG-----AAGTTA--ATAAAT-ACAT-------TTTCCATTGATCAA--ATAA-TATTTC-T-CCAAAAAACAAAATTTA-------TGTA-CA
gi|95806 : GTTCAA---CAAAAGATT-T----A--AATT-GTATC-AC---T---TCA-AAACCAAG-TATGGAATTGTTCAAAGGTAGTT-TGTCCTCTCTGG----AACTTTAATCTGGAATAGTATATCGGTTAATA--TAAAAAAgagtttgaaaaacaaaccatcttcgtatataaaaaaacatgtgtaatacccatgataacgttcgtaaaatctatgttcaacaaaagatttaaattgtatcacttcaaaaccaagtatggaattgttcaaaggtagtttgtcctctctggaactttaatctggaatagtatatcggttaatataaaaaa
gi|95807 : tggctattatcaaaaataaaaaacaacattccattaaattacagaatgaatttctataaagcttatatcaaaccctgtctaagattattgtaacgtaagttggggtcaaacataaactgtctcttaaatattgcaaaaaagcatgtcttattatcgtatgtaatcaatattcaacatcaattttacagacgctttgaagttaataaatacattttccattgatcaaataatatttctccaaaaaacaaaatttatgtacagagtttgaaaaacaaaccatcttcgtatataaaaaaacatgtgtaatacccatgataacgttcgtaaaatctatATTTTCTTTCC-CC-GG-ATATGAAAA-TACTTTA---T--TATAAG-GCATACATAATGTCTACCA-A---CG-ATTACTGC--TATACCATTTGGGGACTTACTTC----C-A-----AAACTGACA--CAA--A-TAA---G--------A----TAC-TT--AA--AATACAAAATAGAGC-CG-CAA-A--
gi|95808 : AAATATATCAATATTA-----AAA---ACAGTTAA--A-CAA---AAAGGACAAC----TAC-TT--AA--GCCGCATAGAAGAGTATG-TAA-AATTA-TAC---AAAAATATCAATATCTTAGTCTAGAAAACCAT-ATATCT-----CT-------TT-------AAA--A--CTG-------C-------TGTCTTTTGATAAA--AGCGATTTTTA-TCAAAAACAACAAAGTT-A-------TGAACTAA------ATAGTTAATGGAACG-TCTCCGG-CATA---TTCAAACGAATTGTTTCAAAT---GAGA-ACGAATGACG-AGAAAGTTGCATTAATACGT-TTAAGGTCAATTTCAAA----C-A----G--AAA----CTTTAT---TAAATCA-AAACCTAATAAT-GAAATGTTTAAAAGAAGGCTTATCATATCCTGAAGCAAAA---ATACGAAACGCCACTCCACTT-GTAATTACG-AATGC-TGTATA----T-TTAAACAAAGTCTCT-----------AATGAA--TACATGAATTTGGGTAAAATACAAAAGTAGGATTA-AAATA
gi|95809 : ATTG-----CA-------TGCT----ATGG--A--ATAAAC-ATTTACAATC-TCTCTA-CAAAGAA--ACT---TCATCAT-ACA--CGGCAAAACTCA-------TGTA-AAA-----CATAGCAAATGGTACA-GCTTCAC-CATA---TTTGTGTGAACTATT-CAACTTCGGGGA-GTCAGT--TA-ACAA---TACATCCAT-CGTGTTGCGTTCAAGTTTAAA----T-A----A--AAAT-GTCTTTAT---T---CCG-AAACCTCT-AATAGAACTGTTTA-----------------TTCGGATGCAATC---ATATGGAATAGTATTCAACTTAGTA--TGAGAAACGCGTGT-TC----G-TTAAAC---GCTTTT--------GTAAGTTAT--TGCTTG-ATTTGGATAAA--AAGAAATTGGTATTAGAAATACATGTACTTCCAACAGCTTTATGCTTAATACATACCATACCGTCATTAGTTTTTG-----T--AAAA-GTAATATTTGATTTTTGT---TTGTTTTTGTATTGATTTTATTGT
gi|95810 : gaaaatttattgaagTACGTTCAA---CAAA----TTA----ATTAAA----CTTTATCACT---CCA-AAACCCAA-CAGGGAATTATTCAAAGGTAGTT-TGTCCTACTCTGG---AATTTTAATCTGGAATAGTATACCAGTTAATA--TCAGAAAC
gi|95811 : -TC----GATCAAACT--GTTTTTCTACAAACGCAAGTAAT--TGTTTG-ATTTGGATAAA--AGGAAAT-----------GTACATGTACCTCCAACAGCTATACGCTTAGTCAAAACCATACCGTAATTAGTTATTGTACAAT--AAAA-AAAA-A---------TGT---TT-TGTTTCTATCGATTTTATTAT