lowQualScore                  :                                              22222                                                     1                                                   222222222222222222222222                           111111111111111111111111111                       22222                  111                                                       
lowQualScore                  :                                         0    11111       33   8         9     3              3    66   2   222 777777777777  888888888888   999   99999  1 222222222222222222222222  3333    1  7777      1   999999999999999999999999999   6666 3  3     1 1   44444 555    2         999                      4     8 6666  0                  
lowQualScore                  :                                         .    .....       ..   .         .     .              .    ..   .   ... ............  ............   ...   .....  . ........................  ....    .  ....      .   ...........................   .... .  .     . .   ..... ...    .         ...                      .     . ....  .                  
lowQualScore                  :                                         2    44444       55   0         8     1              0    99   0   555 333333333333  777777777777   999   77777  5 000000000000000000000000  5555    7  3333      0   111111111111111111111111111   5555 1  7     4 4   33333 000    9         222                      8     5 8888  2                  
consensus                     :                                   ATGACTAGTAT-T---AGTAAATTGGACTGCAGTTACTAAAACT-GTTGGCATTTAAAA-ATGCC-TACAGAA---C------------TA------------TAT-T-AAA----NAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATA--AGTATTAATCT-------GT------TGGCA-------TTA----T-TTAATATA-G-TTCTGT-AG---GCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCCAATTTAC----TAATACTAGTCATTCTATATA
Reference ( gi|134205 )       :                                   ATGACTAGTAT-A---AGTAAATCGGACAGCAGTTACTTAAACT-GTTGGCATTTAAAA-ATGCT-TACAGAA---C------------TA------------TAT-C-AAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATA--AGTATTAATCT-------GT------TGGCA-------TTA----T-TTGATATA-G-TTC-AT-TG---GCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATTAGTCATTCTATATA
gi|134206                     :                                   ATGACTAGTAT-A---AGTAAATCGGACAGCAGTTACTTAAACT-GTTGGCATTTAAAA-ATGCT-TACAGAA---C------------TA------------TAT-C-AAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATA--AGTATTAATCT-------GT------TGGCA-------TTA----T-TTGATATA-G-TTC-AT-TG---GCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATTAGTCAT
gi|134206                     :                                   ATGACTAATAC-T---AGAAAATTTGACTGCAGTTACTAAAACT-GTT-GCATTTAAAA-ATGCC-AAT-GAA---C------------TA------------TAT-C-AAA----TAA-TGC----C-AAC-------------AG----ATTA-ATA--CTTATTATTCTATATACAGT------T-TCA-------TTT----T-TTGATATA-G-TTCTGT-AA---GCAT-TTTTAAATGCC-AACAGTTTAAGTAACTGCTGTCCGATTTAC----TTATACTAGTCATATTGTATattgtat
gi|134207                     :                                   ATGACTAGTAT-T---AGCAAATCGGACAGCAGTTACTTAAACT-GTTGGCATTTAAAA-ATGCC-TACAGAA---T------------TA------------TAT-C-AAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATA--AGTATTAATCT-------GT------TGGCA-------TTA----T-TTAATAAA-G-TTC-AT-TG---GCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATTAGTCATTCTATATA
gi|134207                     :                                   ATGACTAATAC-T---AGAAAATTTGACTGCAGTTACTAAAACT-GTTG-CATTTAAAA-ATGCC-AAT-GAA---C------------TT------------TAT-T-AAA----TAA-TG-----CCAAC-------------AG----ATTA-ATA--CTTATTATTCT-------GTATACAGTTTCA-------TTT----T-TTGATATA-A-TTCTGT-AG---GCAT-TTTTAAATG-CCAACAGTTTAAGTAACTGCTGTCCGATTTGC----TAATACTAGTCAT
gi|134208                     :                                   ATGACTAGTAT-T---AGCAAATCGGACAGCAGTTACTTAAACT-GTTGGCATTTAAAA-ATGCC-TACAGAA---T------------TA------------TAT-C-AAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATA--AGTATTAATCT-------GT------TGGCA-------TTA----T-TTAATAAA-G-TTC-AT-TG---GCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATTAGTCATtctatata
gi|134208                     :                                   ATGACTAATAC-T---AGAAAATTTGACTGCAGTTACTAAAACT-GTT-GCATTTAAAA-ATGCC-AAT-GAA---C------------TT------------TAT-T-AAA----TAA-TGC----C-AAC-------------AG----ATTA-ATA--CTTATTATTCT-------GTATACAGTTTCA-------TTT----T-TTGATATA-A-TTCTGT-AG---GCAT-TTTTAAATGCC-AACAGTTTAAGTAACTGCTGTCCGATTTGC----TAATACTAGTCATATTGTATattgtat
gi|134216                     :                                   ATGAGTAATAC-T---AGAAAATTTGACTGCAGTTACTAAAACT-GTTG-CATTTAAAA-ATGTA-TAC-GAA---C------------TA------------TAT-T-AAA--------T---------ACTG--CCA---AC-AG----ATTA-GTA--CTTATTATTCTATATACAGT------TT-CA-------TAT----T-TTGATTTA-GGTTT-GT-AA---GCAT-TTTTAAATG-CCAACAGTTTAAGTAGCTGCTGACCAAGTTACTAAATAATACTAGTC
gi|134217                     :                                   ATGACT--TAT-ACT-AGAAAATTTGACTGCAGTTACTAAAACT-GT-AGCATTTAAAA-ATGCC-TAT-GAG---C--------------------------TAT-T-AAA----TAA-TGC----C-AAC-----AG---AT-A-----AATA-CT-----TATTATTCT-------AT------TTACAGTTTCATTTT----T-TTTATATA-G-TTCTGT-AG---GCAT-TTTTAAATG-CAAACAGTTTAAGTAACTGCTGTCCGATTTAC----TAGTtctatata
gi|134212                     :                                   ATGACT--TAT-ACT-AGAAAATTTGACTGCAGTTACTAAAACT-GT-AGCATTTAAAA-ATGCC-TAT-GAG---C--------------------------TAT-T-AAA----TAA-TGC----C-AAC-----AG---AT-A-----AATA-CT-----TATTATTCT-------AT------TTACAGTTTCATTTT----T-TTTATATA-G-TTCTGT-AG---GCAT-TTTTAAATG-CAAACAGTTTAAGTAACTGCTGTCCGATTTAC----TAGT-TT-GTCAATCAAAATAtctgttta
gi|134209                     :                                   ATGAGTAATAC-T---AGAAAATTTGACTGCAGTTACTAAAACT-GTT-GCATTTAAAA-ATGTA-TAC-GAA---C------------TA------------TAT-T--------AAA-T---------ACTG--CCA---AC-AG----ATTA-GTA--CTTATTATTCTATATACAGT------T-TCA-------TAT----T-TTGATTTAGG-TTT-GT-AA---GCAT-TTTTAAATGCC-AACAGTTTAAGTAGCTGCTGACCAAGTTACTAAATAATACTAGTCCTTCTGTATA
gi|134210                     :                                   ATGACTAGTAT-T---AGTAAATTGGATTGCAGTTACTAAAACT-GTTGGCATGTAAAA-ATGCC-TACAGAA---C------------TA------------TAT-TAAAA----AAA-T--------AACTG--TAT---AT-AG----AACG-ACT--AGTATTAATCT-------GT------TG----------TTA----T-TTAATATA-G-TTC-AC-AG---GCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTAC----TAATATAAGTCATGCTATATA
gi|134210                     :                                   ATGACTTATAT-T---AGTAAATTGGACTGCAGTTACTAAAACT-GTTGGCATTTAAAA-ATGCC-TGT-GAA---C------------TA------------TAT-T-AAA----TAA-C--------AAC-------------AG----ATTA-ATACTAGTCGT--TCT-------AT------ATACAG------TTATTTTT-TTAATATA-G-TTCTGT-AG---GCAT-TTTTACATGCC-AACAGTTTTAGTAACTGCAATCCAATTTAC----TAATACTAGTCAT
gi|134211                     :                                   ATGACTAGTAT-T---AGTAAATTGGATTGCAGTTACTAAAACT-GTTGGCATGTAAAA-ATGCC-TACAGAA---C------------TA------------TAT-TAAAA----AAA-T--------AACTG--TAT---AT-AG----AACG-ACT--AGTATTAATCT-------GT------TG----------TTA----T-TTAATATA-G-TTC-AC-AG---GCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTAC----TAATATAAGTCATgctatata
gi|134211                     :                                   ATGACTTATAT-T---AGTAAATTGGACTGCAGTTACTAAAACT-GTTGGCATTTAAAA-ATGCC-TGT-GAA---C------------TA------------TAT-T-AAA----TAA-C--------AAC-------------AG----ATTA-ATACTAGTCGT--TCT-------AT------ATACAG------TTATTTTT-TTAATATA-G-TTCTGT-AG---GCAT-TTTTACATGCC-AACAGTTTTAGTAACTGCAATCCAATTTAC----TAATACTAGTCATTATATATAtatatata
gi|134219                     :                                   ATGACTAGTAT-A---AGTAAATTGAACAGCAGTTACTTAAACT-GTTGGCATTTAAAAGATGCC-TACAGAA---C------------TA------------TAT---AAA------------------------TAT---A--AG----AATA-ATT--AGTATTAATCT-------GT------TGGCA-------TTA----T-AAAATATA-G-TTC-AT-AG---ACAT-TTTCTAAT
gi|134215                     :    aaactgtataccggtatatagaatgactaatATGACTAGTAT-A---AGTAAATTGAACAGCAGTTACTTAAACT-GTTGGCATTTAAAAGATGCC-TACAGAA---C------------TA------------TAT---AAA------------------------TAT---A--AG----AATA-ATT--AGTATTAATCT-------GT------TGGCA-------TTA----T-AAAATATA-G-TTC-AT-AG---ACAT-TTTCTAATtctatgta
gi|134220                     :                                   ATGACTTATAT-T---AGTAAATTTGACTGCAATTACTAAAACT-GTTGGCATTTAAAA-ATGCC-TAT-GAA---C------------TA------------TAT-T-AAA----TAA-TG-----
gi|134213                     : ccgtataccagaatgactagtattaatctgttggATAACTAGTAT-T---AGTAAATTTGACTGCAGTTACTAAAACT-GTTGGCATTTAAAA-ATGCC-TTCAGAA---C------------TACATGTACATGTATAT-T-AAA----AAA-TG-----A-AACTGTATAT---AT-AG----AATG-Atctatata
gi|134214                     :                                   ATGACTTATAT-T---AGTAAATTTGACTGCAATTACTAAAACT-GTTGGCATTTAAAA-ATGCC-TAT-GAA---C------------TA------------TAT-T-AAA----TAA-TG-----
gi|134222                     :                                   ATAACTAGTAT-T---AGTAAATTTGACTGCAGTTACTAAAACT-GTTGGCATTTAAAA-ATGCC-TTCAGAA---CTACATGTACATGTA------------TAT-T-AAA----AAA-TG-----
gi|134216                     :                                     GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GTTGGCATTTAAAA-ATGCT-TACAAAC---C------------TA------------AAT-C-AAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATA--AGTACTAATCT-------GT------TGGCA-------GTA----T-TTAATATA-G-TTC-GT-AT---ACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATTACTCATTCTATATAtctgtgta
gi|134209                     :                                     GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GTTGGCATTTAAAA-ATGCT-TACAAAC---C------------TA------------AAT-C-AAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATA--AGTACTAATCT-------GT------TGGCA-------GTA----T-TTAATATA-G-TTC-GT-AT---ACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATTACTCAT
gi|134221                     :                                              -A---GGTAAACTGGACTGCAGTTACT-AAACTTATTGGCATTTAAAC-ATGCTATATAAAA---C------------TA------------TAT-T-AAA----cttctgtata
gi|134217                     :                                           caatg---AGTAAATCGGACAGCAGTTACTTAAACT-GTTTGCATTTAAAA-ATGCC-TACAGAA---C------------TA------------TAT-A-AAA----AAAATG-----A-AACTG--TAA---AT-AG----AATA-ATA--AGTATTTATCT-------GT------TGGCA-------TTA----T-TTAATA---G-CTC-AT-AG---GCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATAAGTCATTCTGTTTAtctatata
gi|134212                     :                                             act---AGTAAATCGGACAGCAGTTACTTAAACT-GTTTGCATTTAAAA-ATGCC-TACAGAA---C------------TA------------TATAA-AAA----AAA-TG-----A-AACTG--TAA---AT-AG----AATA-ATA--AGTATTTATCT-------GT------TGGCA-------TTA----T-TTA--ATA-G-CTC-AT-AG---GCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTC----TAGTATAAGTCAT
gi|134218                     :                                                    GTAAACTGGACTGCAGTTACT-AAACTTATTGGCATTTAAAC-ATGCTATATAAAA---C------------TA------------TAT-T-AAACATTGAA-TG-----A-AACTG--agtttgtcaatcaaaata
gi|134215                     :                                                                                      ATTAGAAA-ATGTC-TAT-GAA---C------------TA------------TAT-T-TTA----TAA-TG-----CCAAC-------------AG----ATTA-ATA------CTAAT-T-------AT------T--C--------TTA----TATTTATATA-G-TTCTGT-AG---GCATCTTTTAAATG-CCAACAGTTTAAGTAACTGCTGTTCAATTTAC----TTATACTAGTCAT
gi|134219                     :                                                                                                    -TATAGAATGAC------------TAA-----------TAT-T-AGA----AAA-TGTCTATG-AACTA--TATTTTAT-AATGCCAACAGATT--AATACTAAT-T-------AT------T--C--------TTA----TATTTATATA-G-TTCTGT-AG---GCATCTTTTAAATG-CCAACAGTTTAAGTAACTGCTGTTCAATTTAC----TTATACTAGTCATTCTATGTA
gi|134220                     :                                                                                                                                                      aaactgtataccggtaCCG--TAT---ACCAG----AATG-ACT--AGTATTAATCT-------GT------TGGCA-------TTA----T-TTAATATA-G-TTC-AT-AG---GCAT-TTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTAC----TAATATAAGTCATTCTATATA
gi|134214                     :                                                                                                                                                                                                                                 CA-------TTA----T-TTAATATA-G-TTC-AT-AG---GCAT-TTTTAAATG-CCAACAGTTTTAGTAATTGCAGTCAAATTTAC----TAATATAAGTCAT
gi|134218                     :                                                                                                                                                                                                                                 CA-------ATG----T-TTAATATA-G-TTTTATATA---GCAT-GTTTAAATG-CCAATAAGTTTAGTAACTGCAGTCCAGTTT
gi|134221                     :                                                                                                                                                                                                                               gtCA-------ATG----T-TTAATATA-G-TTTTATATA---GCAT-GTTTAAATG-CCAATAAGTTTAGTAACTGCAGTCCAGTTTaatgaaactg
gi|134213                     :                                                                                                                                                                                                                                                      ATGTA-G-TTC----TGAAGGCAT-TTTTAAATG-CCAACAGTTTTAGTAACTGCAGTCAAATTTAC----TAATACTAGTTATaccttctatata
gi|134222                     :                                                                                                                                                                                                                                                      ATGTA-G-TTC----TGAAGGCAT-TTTTAAATG-CCAACAGTTTTAGTAACTGCAGTCAAATTTAC----TAATACTAGTTATTCTGTGTAgtacatgtatattaaaaaatgaaactgtatatatagaatga
gi|134219                     :                                                                                                                                                                                                                                                                                              cattttttaatatacatgtacATTTTC----TAATATTAGTCATTCTATATA





Alignments
lowQualScore                  :              1111                                                        111111111111  111111111111        11111                                                              33                1                        1                            
lowQualScore                  :              0000           6         6                   4     4        222222222222  222222222222   4    00000     5     33    44        1                                  99                0 3                      0     8   1  66              
lowQualScore                  :              ....           .         .                   .     .        ............  ............   .    .....     .     ..    ..        .                                  ..                . .                      .     .   .  ..              
lowQualScore                  :              0000           3         3                   7     7        111111111111  111111111111   7    66666     7     77    11        0                                  11                0 3                      8     3   0  55              
consensus                     : ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACTGTTGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAATGA-AACTG--TATAT-AGAATAATAAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATA
Reference ( family-842 )      : ATGACTAGTATTA----GTAAATTGGACTGCAGTTACTAAAACTGTTGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----NAATGA-AACTG--TATAT-AGAATAATAAGTATTAATCTGTTGGCATTATTTAATATAGTTCTGTAGGCATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATACTAGTCATTCTATATA
gi|134205                     : ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACTGTTGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAATGA-AACTG--TATAT-AGAATAATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATA
gi|134206                     : ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACTGTTGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAATGA-AACTG--TATAT-AGAATAATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134207                     : ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACTGTTGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAATGA-AACTG--TATAC-AGAATAATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATAattgtat
gi|134208                     : ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACTGTTGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAATGA-AACTG--TATAC-AGAATAATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134209                     :   GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACTGTTGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATATGA-AACTG--TATAT-AGAATAATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATattgtat
gi|134210                     : ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACTGTTGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--ATAACTG--TATAT-AGAACGACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCATTTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCATGCTATATActtctgtata
gi|134211                     : ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACTGTTGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--ATAACTG--TATAT-AGAACGACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCATTTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCAT
gi|134212                     :          ACTA----GTAAATCGGACAGCAGTTACTTAAACTGTTTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TATAAAAA----AAATGA-AACTG--TAAAT-AGAATAATAAGTATTTATCTGTTGGCATTATTTA--ATAGCTC-ATAGGCATTTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATtatatata
gi|134213                     : ATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACTGTTGGCATTTAAAA-ATGCC-TTCAGAAC------------TACATGTACATGTATAT-TAAA----AAATGA-AACTGTATATAT-AGAATGAttgtcaatcaaaata
gi|134214                     : ATGACTTATATTA----GTAAATTTGACTGCAATTACTAAAACTGTTGGCATTTAAAA-ATGCC-TAT-GAAC------------TA------------TAT-TAAA----TAATG
gi|134215                     : ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACTGTTGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------TATA--AGAATAATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACATTTTCTAAT
gi|134216                     :   GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACTGTTGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATATGA-AACTG--TATAT-AGAATAATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACATTTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATTCTATATA
gi|134217                     :          ACTA----GTAAATCGGACAGCAGTTACTTAAACTGTTTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TATAAAAA----AAATGA-AACTG--TAAAT-AGAATAATAAGTATTTATCTGTTGGCATTATTTA--ATAGCTC-ATAGGCATTTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATTCTGTTTA
gi|134218                     :              ----GTAAACTGGACTGCAGTTACTAAACTTATTGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAACATTGAATGA-AACTG--
gi|134219                     : ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACTGTTGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------TATA--AGAATAATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACATTTTCTAAT
gi|134220                     :                                                                                          aaactgtataccggtatatagaatgactaatCCG--TATACCAGAATGACTAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCATTTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTACTAATATAAGTCATTCTATATAtctatgta
gi|134221                     :              ----GTAAACTGGACTGCAGTTACTAAACTTATTGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAA----CATTG
gi|134222                     : ATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACTGTTGGCATTTAAAA-ATGCC-TTCAGAACTACATGTACATGTA------------TAT-TAAA----AAATGcttctatata
gi|134222                     :                                                                                                                                                                      ATGTAGTTCTGAAGGCATTTTTAAATG-CCAACAGTTTTAGTAACTGCAGTCAAATTTACTAATACTAGTTATTCTGTGTAtctgtgta





Alignments
lowQualScore                  :                   1111                                                             111111111111  111111111111                                                                                                            1                                                     
lowQualScore                  :                   0000           0         3     4  5555            4     4        222222222222  222222222222   2    5555   22 6666666     33   444 33  5555    2  2                                  2        2         2 3                            1       3              
lowQualScore                  :                   ....           .         .     .  ....            .     .        ............  ............   .    ....   .. .......     ..   ... ..  ....    .  .                                  .        .         . .                            .       .              
lowQualScore                  :                   6666           8         6     7  0000            7     7        111111111111  111111111111   4    0000   66 8888888     44   777 22  7777    7  1                                  7        7         3 1                            0       0              
consensus                     :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATNAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATNAGTCATTCTATATA
Reference ( family-842 )      :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATA
gi|134205                     :      ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATA
gi|134206                     :      ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134207                     :      ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATAattgtat
gi|134208                     :      ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134209                     :        GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATattgtat
gi|134210                     :      ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACT-GT----TGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--------ATAACTG--TAT---AT-AG----AACG-ACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCATGCTATATActtctgtata
gi|134211                     :      ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACT-GT----TGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--------ATAACTG--TAT---AT-AG----AACG-ACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCAT
gi|134212                     :               ACTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TATAAAAA----AAA-TG-----A-AACTG--TAA---AT-AG----AATA-ATAAGTATTTATCTGTTGGCATTATTTA--ATAGCTC-ATAGGCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATtatatata
gi|134213                     :      ATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACT-GT----TGGCATTTAAAA-ATGCC-TTCAGAAC------------TACATGTACATGTATAT-TAAA----AAA-TG-----A-AACTGTATAT---AT-AG----AATG-Attgtcaatcaaaata
gi|134214                     :                                                                                                                                                                                     CATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTACTAATATAAGTCAT
gi|134215                     :      ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACT-GT----TGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------------TAT---A--AG----AATA-ATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACAT-TTTCTAAT
gi|134216                     :        GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATTCTATATA
gi|134217                     :               ACTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-AAAA----AAAATG-----A-AACTG--TAA---AT-AG----AATA-ATAAGTATTTATCTGTTGGCATTATTTAATA--GCTC-ATAGGCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATTCTGTTTA
gi|134218                     :                   ----GTAAACTGGACTGCAGTTACT-AAACTTAT----TGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAACATTGAA-TG-----A-AACTG--
gi|134219                     :                                             AAACT-GTATACCGGTATATAGAA--TGAC-TA-------------------A------------TAT-TAGA----AAA-TGTCTATG-AACTA--TATTTTAT-AATGCCAACAGATTAATACTAAT-TATTCTTAT-ATTTA-TATAGTTCTGTAGGCATCTTTTAAATG-CCAACAGTTTAAGTAACTGCTGTTCAATTTACTTATACTAGTCATTCTATGTA
gi|134219                     :      ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACT-GT----TGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------------TAT---A--AG----AATA-ATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACAT-TTTCTAAT
gi|134220                     :                                                                                                          aaactgtataccggtatatagaatgactaatCCG--TAT---ACCAG----AATG-ACTAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTACTAATATAAGTCATTCTATATAtctatgta
gi|134221                     :                   ----GTAAACTGGACTGCAGTTACT-AAACTTAT----TGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAA----
gi|134222                     : caatgATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACT-GT----TGGCATTTAAAA-ATGCC-TTCAGAACTACATGTACATGTA------------TAT-TAAA----AAA-TG-----cttctatata





Alignments
lowQualScore                  :                   1111                                                             111111111111  111111111111                                                                                                            1                                                     
lowQualScore                  :                   0000           0         3     4  5555            4     4        222222222222  222222222222   2    5555   22 6666666     33   444 33  5555    2  1                                  2        2         2 3                            1       1              
lowQualScore                  :                   ....           .         .     .  ....            .     .        ............  ............   .    ....   .. .......     ..   ... ..  ....    .  .                                  .        .         . .                            .       .              
lowQualScore                  :                   6666           8         6     7  0000            7     7        111111111111  111111111111   4    0000   66 8888888     44   777 22  7777    7  0                                  7        7         3 1                            0       0              
consensus                     :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATNAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATNAGTCATTCTATATA
Reference ( family-842 )      :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATNAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATNAGTCATTCTATATA
gi|134205                     :      ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATA
gi|134206                     :      ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134207                     :      ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATAattgtat
gi|134208                     :      ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134209                     :        GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATattgtat
gi|134210                     :      ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACT-GT----TGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--------ATAACTG--TAT---AT-AG----AACG-ACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCATGCTATATActtctgtata
gi|134211                     :      ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACT-GT----TGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--------ATAACTG--TAT---AT-AG----AACG-ACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCAT
gi|134212                     :               ACTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TATAAAAA----AAA-TG-----A-AACTG--TAA---AT-AG----AATA-ATAAGTATTTATCTGTTGGCATTATTTA--ATAGCTC-ATAGGCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATtatatata
gi|134213                     :      ATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACT-GT----TGGCATTTAAAA-ATGCC-TTCAGAAC------------TACATGTACATGTATAT-TAAA----AAA-TG-----A-AACTGTATAT---AT-AG----AATG-Attgtcaatcaaaata
gi|134214                     :                                                                                                                                                                                     CATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTACTAATATAAGTCAT
gi|134215                     :      ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACT-GT----TGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------------TAT---A--AG----AATA-ATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACAT-TTTCTAAT
gi|134216                     :        GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATTCTATATA
gi|134217                     :               ACTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-AAAA----AAAATG-----A-AACTG--TAA---AT-AG----AATA-ATAAGTATTTATCTGTTGGCATTATTTAATA--GCTC-ATAGGCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATTCTGTTTA
gi|134218                     :                   ----GTAAACTGGACTGCAGTTACT-AAACTTAT----TGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAACATTGAA-TG-----A-AACTG--
gi|134219                     :                                             AAACT-GTATACCGGTATATAGAA--TGAC-TA-------------------A------------TAT-TAGA----AAA-TGTCTATG-AACTA--TATTTTAT-AATGCCAACAGATTAATACTAAT-TATTCTTAT-ATTTA-TATAGTTCTGTAGGCATCTTTTAAATG-CCAACAGTTTAAGTAACTGCTGTTCAATTTACTTATACTAGTCATTCTATGTA
gi|134219                     :      ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACT-GT----TGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------------TAT---A--AG----AATA-ATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACAT-TTTCTAAT
gi|134220                     :                                                                                                          aaactgtataccggtatatagaatgactaatCCG--TAT---ACCAG----AATG-ACTAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTACTAATATAAGTCATTCTATATAtctatgta
gi|134221                     :                   ----GTAAACTGGACTGCAGTTACT-AAACTTAT----TGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAA----
gi|134222                     : caatgATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACT-GT----TGGCATTTAAAA-ATGCC-TTCAGAACTACATGTACATGTA------------TAT-TAAA----AAA-TG-----cttctatata


blockSeqs                     :                   TTTA                     T     T  ATAC            G     A        TACATGTACATG  CATGTACATGTA   A    CATT   AT TCTATG      TA   TTT CC  TGCC    G  A                                  T        C         C C                            T       T
blockSeqs                     :                   TTTA                     T     T  .               G     A        .             .              .    .      T  AT          .    .   T   .       .  A                                  .        .         C .                            T       T
blockSeqs                     :                   .                        T     .  .               .     .        .             .              .    .      T  AT          .    .   C   .       .  A                                  .        .         C .                            T       T
blockSeqs                     :                   .                        T     .  .               .     .        .             .              .    .      T  A           .    .   C   .       .  A                                  .        .         C .                            T       T
blockSeqs                     :                   .                        A     .  .               .     .        .             .              .    .      T  A           .    .   T   .       .  T                                  .        .         . .                            A       A
blockSeqs                     :                   .                        A     .  .               .     .        .             .              .    .      T  A           .    .   T   .       .  T                                  .        .         . .                            A       A
blockSeqs                     :                   .                        T     .  .               .     .        .             .              .    .      T  A           .    .   T   .       .  A                                  .        .         . .                            T       A
blockSeqs                     :                   .                        A     .  .               .     .        .             .              .    .      T  A           .    .   T   .       .  T                                  .        .         . .                            A       A
blockSeqs                     :                   .                        T     .  .               .     .        .             .              .    .      T  A           .    .   T   .       .  A                                  .        .         . .                            T       T
blockSeqs                     :                   .                        T     .  .               .     .        .             .              .    .      T  A           .    .   T   .       .  A                                  .        .         . .                            T       A
blockSeqs                     :                   .                        T     .  .               .     .        .             .              .    .      T  A           .    .   T   .       .  T                                  .        .         . .                            A       T
blockSeqs                     :                   .                        T     .  .               .     .        .             .              .    .      .  A           .    .   T   .       .  T                                  .        .         . .                            A       A
blockSeqs                     :                   .                        A     .  .               .     .        .             .              .    .      .  .           .    .   .   .       .  T                                  .        .                                                 
blockSeqs                     :                   .                        .     .  .               .     .        .             .              .    .      .  .           .    .   .   .       .                                     .        .                                                 
blockSeqs                     :                   .                        .     .  .               .     .        .             .              .    .      .              .                                                                                                                     
blockSeqs                     :                                                  .  .               .     .        .             .              .    .                                                                                                                                           


blockSeqCons                  :      
originalCons                  :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATNAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATNAGTCATTCTATATA
finalCons                     :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATNAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATNAGTCATTCTATATA





Alignments
lowQualScore                  :                   1111                                                             111111111111  111111111111                                                                                                            1                                                     
lowQualScore                  :                   0000           0         3     4  5555            4     4        222222222222  222222222222   2    5555   22 6666666     33   444 33  5555    2  1                                  2        2         2 3                            1       1              
lowQualScore                  :                   ....           .         .     .  ....            .     .        ............  ............   .    ....   .. .......     ..   ... ..  ....    .  .                                  .        .         . .                            .       .              
lowQualScore                  :                   6666           8         6     7  0000            7     7        111111111111  111111111111   4    0000   66 8888888     44   777 22  7777    7  0                                  7        7         3 1                            0       0              
consensus                     :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATNAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATNAGTCATTCTATATA
Reference ( family-842 )      :      ATGACTAGTATTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATNAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATNAGTCATTCTATATA
gi|134205                     :      ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATA
gi|134206                     :      ATGACTAGTATAA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAGAAC------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTGATATAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134207                     :      ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCATTCTATATAattgtat
gi|134208                     :      ATGACTAGTATTA----GCAAATCGGACAGCAGTTACTTAAACT-GT----TGGCATTTAAAA-ATGCC-TACAGAAT------------TA------------TAT-CAAA----AAA-TG-----A-AACTG--TAT---AC-AG----AATA-ATAAGTATTAATCTGTTGGCATTATTTAATAAAGTTC-ATTGGCAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTAGTCAT
gi|134209                     :        GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATattgtat
gi|134210                     :      ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACT-GT----TGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--------ATAACTG--TAT---AT-AG----AACG-ACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCATGCTATATActtctgtata
gi|134211                     :      ATGACTAGTATTA----GTAAATTGGATTGCAGTTACTAAAACT-GT----TGGCATGTAAAA-ATGCC-TACAGAAC------------TA------------TAT-TAAA----AAA--------ATAACTG--TAT---AT-AG----AACG-ACTAGTATTAATCTGTTG---TTATTTAATATAGTTC-ACAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAACTGCAGTCCAATTTACTAATATAAGTCAT
gi|134212                     :               ACTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TATAAAAA----AAA-TG-----A-AACTG--TAA---AT-AG----AATA-ATAAGTATTTATCTGTTGGCATTATTTA--ATAGCTC-ATAGGCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATtatatata
gi|134213                     :      ATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACT-GT----TGGCATTTAAAA-ATGCC-TTCAGAAC------------TACATGTACATGTATAT-TAAA----AAA-TG-----A-AACTGTATAT---AT-AG----AATG-Attgtcaatcaaaata
gi|134214                     :                                                                                                                                                                                     CATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTACTAATATAAGTCAT
gi|134215                     :      ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACT-GT----TGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------------TAT---A--AG----AATA-ATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACAT-TTTCTAAT
gi|134216                     :        GACTAGTATTATTTAGTAACTTGGTCAGCAGCTACTTAAACT-GT----TGGCATTTAAAA-ATGCT-TACAAACC------------TA------------AAT-CAAA----ATA-TG-----A-AACTG--TAT---AT-AG----AATA-ATAAGTACTAATCTGTTGGCAGTATTTAATATAGTTC-GTATACAT-TTTTAAATG-C-AACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATTACTCATTCTATATA
gi|134217                     :               ACTA----GTAAATCGGACAGCAGTTACTTAAACT-GT----TTGCATTTAAAA-ATGCC-TACAGAAC------------TA------------TAT-AAAA----AAAATG-----A-AACTG--TAA---AT-AG----AATA-ATAAGTATTTATCTGTTGGCATTATTTAATA--GCTC-ATAGGCAT-TTTTAAATG-C-TACAGTTTTAGTAACTGCAGTCAAATTTTCTAGTATAAGTCATTCTGTTTA
gi|134218                     :                   ----GTAAACTGGACTGCAGTTACT-AAACTTAT----TGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAACATTGAA-TG-----A-AACTG--
gi|134219                     :                                             AAACT-GTATACCGGTATATAGAA--TGAC-TA-------------------A------------TAT-TAGA----AAA-TGTCTATG-AACTA--TATTTTAT-AATGCCAACAGATTAATACTAAT-TATTCTTAT-ATTTA-TATAGTTCTGTAGGCATCTTTTAAATG-CCAACAGTTTAAGTAACTGCTGTTCAATTTACTTATACTAGTCATTCTATGTA
gi|134219                     :      ATGACTAGTATAA----GTAAATTGAACAGCAGTTACTTAAACT-GT----TGGCATTTAAAAGATGCC-TACAGAAC------------TA------------TA--TAAA------------------------TAT---A--AG----AATA-ATTAGTATTAATCTGTTGGCATTATAAAATATAGTTC-ATAGACAT-TTTCTAAT
gi|134220                     :                                                                                                          aaactgtataccggtatatagaatgactaatCCG--TAT---ACCAG----AATG-ACTAGTATTAATCTGTTGGCATTATTTAATATAGTTC-ATAGGCAT-TTTTAAATGCC-AACAGTTTTAGTAATTGCAGTCAAATTTACTAATATAAGTCATTCTATATAtctatgta
gi|134221                     :                   ----GTAAACTGGACTGCAGTTACT-AAACTTAT----TGGCATTTAAAC-ATGCTATATAAAAC------------TA------------TAT-TAAA----
gi|134222                     : caatgATAACTAGTATTA----GTAAATTTGACTGCAGTTACTAAAACT-GT----TGGCATTTAAAA-ATGCC-TTCAGAACTACATGTACATGTA------------TAT-TAAA----AAA-TG-----cttctatata