lowQualScore : 2222 22 1 1 222 11 1111 11 11 1111 111 1111111 1111 1111111 2222222222222222222 1 111111111111 111 1111 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 333333333333333333333 1111 11 1111111 33333333333333333333333333333 111111 111111111 3333333333333333333333 1 1
lowQualScore : 1111 6 2 3 3 9 0 0 66 11 5 5 2 66 0 0 5 6 0 4 0 000 55 8888 22 4 8 55 77 2 4 4 1111 444 4 4 3 1 1 0 6666666 0 1111 0 0000000 3 888 1 6666666666666666666 0 5 0 555555555555 777 000 6 2 777 2 0 4444 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 2 4 7 1 9 55 6 2 222222222222222222222 888 777 8888 66 44 2 44 2 9999999 1 55555 4444 88888888888888888888888888888 4 66 333333 111111111 2 8 4444 22 3333333333333333333333 1 6 7 4 55 8 222 5 2 0 33 2 4444 0 1 3 99999 3 2
lowQualScore : .... . . . . . . . .. .. . . . .. . . . . . . . ... .. .... .. . . .. .. . . . .... ... . . . . . . ....... . .... . ....... . ... . ................... . . . ............ ... ... . . ... . . .... ...................................................................................... . . . . . . .. . . ..................... ... ... .... .. .. . .. . ....... . ..... .... ............................. . .. ...... ......... . . .... .. ...................... . . . . .. . ... . . . .. . .... . . . ..... . .
lowQualScore : 2222 0 0 2 5 8 8 8 11 77 0 0 5 99 0 0 6 2 7 3 7 000 77 9999 22 6 0 55 88 3 0 8 1111 666 0 0 7 4 6 2 2222222 2 5555 7 1111111 6 555 8 6666666666666666666 4 9 0 777777777777 888 333 7 2 000 7 3 3333 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333 8 7 6 0 2 8 88 3 7 222222222222222222222 333 555 9999 33 22 2 99 8 9999999 9 55555 7777 77777777777777777777777777777 1 99 333333 000000000 2 9 7777 99 4444444444444444444444 1 7 7 4 88 9 222 0 2 9 11 2 7777 5 0 3 00000 1 0
consensus : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGA--TATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGGCT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCCAGC-TTCGTCTA-GT-ACATCCGATTCGA-------GTTCCGGC--TCGT---C---A-TCCATTTCGTC-----TTC-----------CGGATAATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTCTC--ANTTGTTCATTATAATGTTCAGAGCTTT---TC---T-CCA-AA---G-ANACA--------CCA-ACTG--TA--CGCT------G------A---TT-TATG-TCA--TTTGATATATTAGCNTTCACNGAAACCTGGCT-AAT--A-ACGATA---CGNCT----ACATCG---GAT---CTNNCCT----TTTCCAAC--TA-CCA-NANACCNTTCC-GNAAG----G----ATCGC--CCGAT----T---G---ACAGNC----ACGGCGGTGTTAT--NGTNTAT--GT-----TA-AG-G----ATACGA-T-CA-C-TNCTCGC----C--GAAG-ACANGA-CTT-AG-AATCAANCGA-CATT--GAATGCA-T----ATGGNTAGAANTNANNGTNAAACATAAACCTATTCTGTT
Reference ( gi|162649 ) : TATTTCC----TCTCTTCTCGTATGATCACATGTCCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGA--TATATCTGTTAACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGGCT--ATCCGTTTTAC-T--TATT-CTATCCGGTGACGTCCACGAA-AATCCCGGTCCAGC-TTCATCTA-GT-ACGTCCGATTTGA-------GTTCCGGC--TCGT---C---A-TCCATTTCGTC-----TTC-----------CGGATCATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTCTC--ATTTGTTCATTATAATGTTCAAAGCTTT---TC---T-CCA-AA---G-AAACA--------CCA-ACTG--TA--ATCT------G------A---TT-TATGCTCA--TTTGATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-ACAATA---CACCT----ACATCG---GAT---CTTGCCT----TTTCCAAC--TA-CCA-AACACTCTTCC-GTAAG----G----ATCGC--CCGAC----T---G---ACAGAT----ATGGCGGTGTCCT--AGTCTAT--GT-----TA-AG-G----ATACGA-T-CA-T-TGCTCGC----C--GAAG-ACAAGA-CTT-AG-AGTTAAACGA-CATT--GAATGTA-T----ATGGCTAGAATTGAAAGTGAAACATAAACCTATTTTGTT
gi|162647 : TATTTCTGCTATTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTTTTACATAATGTCTATTGA--TATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGGCT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCCAGC-TTCGTCTA-GT-ACGTCCGATTTGA-------GTTCCG-C--TCGT---C---A-TCCATTTTGTC-----TTC-----------CGGATCATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTCTC--ATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-CCA-AA---G-ATACA--------CCA-ACTG--TA--TGCT------G------A---TT-TATGCTCA--TTTGATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-ACAATA---CACCT----ACATCG---GAT---CTTGCCT----TTTCCAAC--TA-CCA-AACACCCTTCC-GTAAG----G----ATCGC--CCGAC----T---G---ACAGAT----ACGGCGCTGTCCT--AGTCTAT--GT-----TA-AG-G----ATACGA-T-CA-C-CGCTCGC----C--GAAG-ACAAGA-CTT-AG-AGTTAAACGA-CATT--GAATGTA-T----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162648 : TATTTCC----TTTCTACTCGTATGATCACATGTTCCACTGAGGATACTCGCTCACACAGACTAATCACCCTGGTATTACATAATGTCTATTGA--TATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---TTTT--GATTAT----TTGGCT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCCAGC-TTCGTCTA-GT-ACGTCCGATTTGA-------GTTCCGGC--TCGT---T---A-TCCATTTTGTC-----TTC-----------CGGATCATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTCTC--ATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-CCA-AA---G-ATACA--------CCA-ACTG--TA--TGCT------G------A---TT-TATGCTCA--TTAGATGTATTGGCGTTCACGGAAACCTGGTTGAAT--A-ACAATA---CACCT----ACATCG---GAT---CTTGCCT----TTTCCAAC--TA-CCA-AACACCCTTCC-GCAAG----G----ATCGC--CCGAC----T---G---ACAGAT----ATGGCGGTGTCCT--AGTCTAT--GT-----TA-AG-G----ATACGA-T-CA-C-CGCTCGC----C--GAAG-ACAAGA-CTT-AG-AGTTAAACGA-CATT--GAATGTA-T----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162650 : TATTTCC----TTTCATCTCGTATGATCACATGTTCCACGGAGGTTATTCGCTT---C-GACTTATCACCCTGGTATTACATAATGTGTATTGA--TATATCTGTATACAGAGCGAGAGTGGGT-CT-CTTTGGTCAC--TAT-AA-ACTCAATCAAAAAGGGTTTAAACCGATTAACAGTTTCG---ATTT--GATTAT----TTGGCT--ATACGGTTTAC-T--TATT-CTGTCCAGTGACGTCCACGAA-AATCCAGGTCCAGC-TTCATCAA-GT-ACTTCCGAATTGA-------GTTCCGGC--TCGT---C---A-TCCACTTTGTC-----TTC-----------CGGATCATTT-GA--CCTCGC-A--GAA--CTT--ATTTC-TAGC--CT-TCTGTT--ATTTGTTCATCATAATGTCCAAAGCTTT---GC---T-CCA-AA---G-ATACA--------CCA-ACTG--TA--TACT------G------A---TT-TATGCTCA--TTTGATGTATTGGCTTTCACGTACACCTGGTTGAAT--A-ACAATA---CACCT----ACATCG---GAT---CTTGCCT----TTTCCATC--TA-CCA-AACACCCTT-T-GTAAG----G----ATCGC--CCGAT----T---G---ACAGAT----ATTGCGGTGTCCT--AGTCTAT--GT-----TA-AG-G----ATACGA-T-CA-C-AGCTC-C----C--GAAG-GCAAGA-CTA-AG-AGGTAAACGA-CATT--GAATGTA-T----ATTGTTAGAATTGAAAGTGAATCATAAACCTATTCTGTT
gi|162651 : TACTTCT----TTTCTTCTCGCATGATCACATGTCCCTCGGAGGATACTCGCTCACTCTGACTTATCGCCCTAGTATTACATAATGTGTATAGA--TACATCTGCTCACAGAGCGAGAGTTGGT-CT-GTTTGGTCAC--TAT-CA-ACTCAA----AAAGGTCTTAAACCGATGAACAGTTTTG---ATTT--GATTAT----TTGGCT--TTCCATTTTAC-T--TATA-CTGTCCGGTGACGTCCACAAACAATCCTGGTCCAGC-TTGATGTA-GT-ACA-------------------TCCGAT--TTGA---G---A-TCC----------------------------GGATGAGTT-GG--CTTTTC-G--GAA--CTT--ATTGC-TAGC--AA-TCTCTTTTATTTGTTCATTATAATGTCAAAAGATTT---GC---C-ACA-AC---A-ATACA--------CCA-ACTG--TA--TGCT------G------A---TT-TGTGCTCA--TTTGATGTATTGGCTTTCGCGGAAACCTGGTTAAAT--A-ACAACA---GATCT----ACATCA---TAT---CTTGCCT----TTTCCAAC--TA-CCA-AACACCCTTCC-GTAAG----G----ATCGC--CCGAC----T---G---ACAGAT----ATGGCGGTGTTCT--AGTCTAT--GT-----AA-AA-G----ATACGA-T-CA-C-TGCTCGC----C--GAAA-GCATGT-CTT-AG-AGTCAAACGA-CATT--GAATGTA-T----ATGCTTTGAATTGAAAGTGAAGCATAAAACTATTTTGTT
gi|162652 : TTATGACTTTGGAATTACATAATGTGTGTTGATTTAAATATGT--ACAGGGCGAGAATAGG
gi|162653 : CTGGAATAATATAATGTCTACTGA--CATAATTGTTTATAGAATCCGAATAGGT-TT-GTTTGGTC-CTGTAT-CT-TCTTAAGCAAAAGGaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgtcaatagttcactacaatgttcagagttttctgccaaagaaagaattactctatgcagaattattcaactttgatatattagcatttaccgagacctggttaacagacaatgtgtcaaacgatgatatattctttgacaattatttagtcccatttcgtaaagacagaccattagacgctcatggtggtattattgtatacgtaagcgataaattacacgcaataagaagaactgaacttgaacccaataatatcgaatgcttatggatagaa
gi|162654 : TGGTATAACATAATAGCTATAGA--TATTTCTGTATATAGGGTGAGGATAGGTAAA-TTTTG--CAT--TATACAGGCTAAATC-CAAAGGCTTTAAAT---------GTTTTACTTATTTTGAATTATACACATGGCTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC--C-TT----TA-AT-ATATTTGATCTtacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattatcaattgttcaatataatgttcaaagttttattcacaagaaagacattctgtacgcagaacttttacaatttgatatattagtatttacagagacttggctaata
gi|162655 : TGGTATAACATAATGGCTATAGA--TATTTCTGTATATAGGGTGAGGATAGGT-ATATTTTG--CAT--TATACAGGCTAAATC-CAAAGGCCTTAAAT---------GTTTTACTTATTTTGAATTATACACATGGCTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC--C-TT----TA-AT-ATATCTGATCTcactaaacaatctaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgatgctcatgggggaattcttgtatatataaataacagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaatcattttgtt
gi|162656 : --TATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-AATCAAGCAAAAAGGGTTTAAACCGATGAACAATTTCG---ATTT--GATTAT----TTGGCT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACATCCACGAA-AATCCCGGTCCAGC-TTCATCTA-GT-ACATCAGATTTGA-------GTTCCGGC--TCTT---C---A-TCCATTTTGTT-----TTC-----------CGGATCATTT-GA--CATTTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTCTC--ATTTGTTCATTATAATGTTCAAGGCTTT---GC---C-CCA-AA---G-ATACA--------CCA-ACTG--TG-------------------------------------TTGATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-ACAATA---CACGT----ACATCG---GAT---CTTGCAT----TTTCCAAC--TA-CCA-AACACCCATCC-GTAAG----G----ATCGC--TCGAC----T---A---ACAGAT----ATGGCGGTGTCCT--AGTCTAT--GT-----TA-AG-G----ATACGA-T-CA-C-TGCTCGC----C--GAAG-ACAAGA-CTT-AG-AGTTAAACGA-CATT--GAATGTA-TGTGCATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTTcactaaacaatccaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgacgctcatgggggaattcttaaatatataagtaatagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaataattttgtt
gi|162658 : AC----TTGGCT--ATCGGTCATA--T--TGTTGTTATCAGGAGATGTACACCCA-AACCCAGGCCC--CATTGAACTACTT-ATATCTGATACAA-------GCTCTGTCAGTAGTA--CTCAA-TCCACCTCATC-----TCA-----------TTG-TAATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTGTC--GTTAGTACACTACAACGTTCAGAG------------T-ATA-AA---G----CA--------CAA-ATTGGATATCATCTACTCCGA------A---TTATATGGT----TTTGATATACTTACTTTTACTGAAACATGGCTCGAT--G-ATTCTGTTTCAACTGATGATAT-----GATG--CTTCCTT----CTTTTAACA-AA-CCA-GAAA--------GAAAA----G----ATCGC-----AT----TGGAG---ACAACC----ACGGAGGGGTCAT---GT-TATTCAT-----TA-AA-G----ACACAA-TACA-C-TAC-AAA----C--GTAG-ACACGATCTT-GA-AATCAACCCA-C-TT--GAATGTA-T----ATGG
gi|162659 : AC----TTGGCT--ATCAGTCATA--T--TGTTGTTATCAGGAGATGTGCACCCA-AACCCAGGCCC--CATTGAACTA-CTTACATCTGATACAA-------GCTCTGTCAGTAGTACTC---AATCTACCTCATC-----TCA-----------TTG-TAATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTGTC--GTTAGTACACTACAACGTTCAGAG------------T-ATA-AA---G----CA--------CAA-ATTGGATATCATCT------ACTCCGAA---TTATATGGT----TTTGATATACTTACTTTTACTGAAACATGGCTCGAT--G-ATTCTGTTTCAACTGATGATAT-----GATG--CTTCCTT----CTTTTAAC--AAACCA-GAAA--------GAAAA----G----ATCGC-----AT----T---G---G-AGACTACCACGGAGGGGTCAT---GT-TATTCAT-----TA-AA-G----ACACAA-TACA-C-TAC-AAA----C--GTAG-ACACGATCTT-GA-AATCAACCCA-C-TT--GAATGTA-T----ATGG
gi|162660 : TTTAC-TGTTGTT-TTG--CGGAGATATTCATCCA-AATCCAGGTCCAGG-TTC---T--GT-ATAACCAACTCCAACAAACAGTTC--AT--TC-T---C---A-T---TTTCTTCAACTTTTT-----------CAGATAGTTTAGAAGCATT---A--GA---CTT--GTCACATAAT--TAATCTCTC------GTTCACTATAATGTTCAGAG--TA---TCAAAT-CTA-AACTGG-ATACA--------CT---TTG--TA----CC------G------A---AT-TATATGGG--TTTGATATTCTAACTTTCTCTGAAACTTGGCT---T--A-ACGACT---CTGTT----ATGTCA---GCTGAACTAAACT----TT--CAATCGTT-TCATAAC-----CCC-GAAAG----AAAATATCGC-----AT----T---G---G-AGATAGTCATGGAGGTGT--T--A--TTAT--GTATAAACA-AGAA----ATACT--T-CA---TATTTTT----C--GTAG-ACAAGA-CCT-CG-A---AATCAATCGTTTAGAATGTA-T----TTGGGTGGAAATATCAATTAAACACAAAC
gi|162661 : --TCAT---C---A-TCC---TCATCCT---TTT-----------CAGATAGTTT-GG--AAGCCT-T--GGA--CTT----TTC-ACAT--CA-TCTTTC--TCTTGTTCATTATAATGTTCAAAGTAT---------------AA---G-ATATAAATTAGATACA-ATT---TA--CTCT------G------A---AC-TATATGGA--TTTGATATATTAGCTTTCTCTGAAACTTGGCTTAAT--G-ATACTA------TT----GCATC-----AT---CTGATCTAGAATTCCCAGCA-TT-CCA-TAAACCAATAA-GAAAA----G----ATCGCGTTGGA---------G---ATAGCC----ATGGTGGTGTTAT--TATGTAC--AT-----TA-AA-G----ATACAATT-CA-T-TTTTC-T----C--GTAG-AAATGA-CTT-TGAAATCAATCGT-C-TG--GAATGCA-T----ATGGATTGAACTTACTATTAAACACAGACATATacatactat
gi|162657 : --TCAT---C---A-TCC---TCATCCT---TTT-----------CAGATAGTTT-G-------------GAAGCCTTGGACTTT-TAACATCA-TCTTTC--TCTTGTTCATTATAATGTTCAAAGTATTAGATA---T--TA-AT---T-AGATA---------CA-ATT---TA--CTTT------G------A---AC-TATATGGA--TTCGATATATTAGCTTTCTATGAAACTTGGCTTAAT--G-ATACTA------TT----GCATC-----AT---CTGATCTAGAATTCCCAGCG-TT-CCA-TAAACCAATAA-GAAAA----G----ATCGCGTTGGA---------G---ATAGCC----ACGGTGGTGTTAT--TATGTAC--AT-----TA-AA-G----ATACAATT-CA-T-TTTTC-T----C--GTAG-AAATGA-CTT-AGAAATCAATCGT-C-TG--GAATGCA-T----ATGGGTTGAACTTACTATTAAACACAGACATATact
gi|162662 : acttggacctacattctactgctgacttgtggagatattcacccaaacccaggtcctataagctcaactgcaaccaacaactcagtt---C---A-TCCATTTCATC-----TTCTTCGTTCCTATCAGATAGTTT-GG--AAGCCT-A--TGA--CTT--GTCACATA-----A-TCTTTC--TCTTGTTCATTATAATGTTCAAAG--TA---TCAAAT-ATA-AAT--T-AGATA---------CA-A-TC--TA--CTCT------G------AAC-TG-TATG--GG--TTTGATATATTAACATTCTCCGAAACTTGGCT---T--A-ATGATA---CTGCT----GCGTCAGCTGAT---CTAGAAT----TT--CAAT--CA-TT----CCCTCAACCAATAAGAAATG----ATCGCATTCGA---------G---ATAGCC----ACGTTGGTGTCAT--TATAAAT--AT-----TA-AA-G----AGACAATT-TATT-TTCTCGT--------AAA-A-ATGA-CTTAAA-AATCAATCGT-C-TT--GAATGCGTT----TTGGTTGAAATTact
gi|162654 : ATTT-GA----TCTC-ACTAAA--CA---AT--C-TAAC---A-TTTCCC----TTGTCCATTACAACGTACAGAGCTTT---TT---A-CAG-AA---A-AAAGA--------CAT-ACTC--TA--TGCT------G------A---TC-TA-AAACAC-TTTGATATTTTAGCATTTACAGAAACGTGGCTTAGTCCA-AC--TA---CTGAT----ACAAAT---GAC---ATTATCT----ACGACAAC--TA-CCA-TATACCGTTTC-GTAAT----G----A------CAGACGTTTT---G---ATGCTC----ATGGGGGAATTCT--TGTATAT--AT-----AA-AT-A----ACA-GA-C-TA-CATG--CGA----TAAGAAG-ATATGA-TCT-AG-AGATACCTGG-TATT--GAATGCA-T----TTGGTTAGAAATTCGCCTAAAAAATAAAATCATTTTGTTactattaagcacagacatatactctt
gi|162655 : tggtataacataatagctatagatatttctgtatatagggtgaggataggtaaattttgcattatacaggctaaatccaaaggctttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatat--CA-TTTCCC----TTGTCCATTACAACGTACAGAGCTTT---TT---A-CAG-AA---A-AAAGA--------CAT-ACTC--TA--TGCT------G------A---TC-TA-AAACAC-TTTGATATTTTAGCATTTACAGAAACGTGGCTTAGTCCA-AC--TA---CTGAT----ACAAAT---GAC---ATTATCT----ACGACAAC--TA-CCA-TATACCGTTTC-GTAAT----G----A------CAGACGTTTT---G---ACGCTC----ATGGGGGAATTCTTAAATATATAAGT-----AATAG-ACTACATGCGA-T-AA-----------------GAAG-ATATGA-TCT-AG-AGATACCTGG-TATT--GAATGCA-T----TTGGTTAGAAATTCGCCTAAAAAATAAAATAATTTTGTT
gi|162663 : tggtataacataatggctatagatatttctgtatatagggtgaggataggtatattttgcattatacaggctaaatccaaaggccttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatatatctgatctcactaaacaatccaaA-TCTTTC--TCTTATTCATTATAATGTTCCAAG--TA---TCAAAT-ACA-AATTAG-ATACAAT------CTACACTG---A--A-CT------G-------------TATGG--G--TTTGATATATTAACATTCTTCGAAACTTGGCT---T--A-ATGATA---CTGTT----GCGTCA---G-----CTGATCTAGAATTTCCATCA-TT-CCA-TAAACCAATAA-GAAAA----G----ATCGC-----AT----T---GGGGATAGCC----ACGGTGGTGTTAT--TATGTAT--AT-----TA-AG-G----AGACAA-TTCA-T-TTTTC-T----C--GTAG-ACATGA-CTT-AGAAATCAATCGT-C-TA--GAATGCG-T----ATGGGTTGAAATTACTATTAAGCACAGACATAT
gi|162664 : A-TCTTTC--TCTTGTGCATTATAATGTTCAAAG--TA---TCAAAT-ACA-AA---TTAGATA--------C-A-A-TC--TA--CTCT------G------AAC-TG-TATGG--G--TTTGATATATTAACATTCTCCGAAACTTGGCT---T--A-ATGATA---CTGTT----GCGTCA---G-----CTGATCTAGAATTTCCATCA-TT-CCA-TAAACCAATAA-GAAAA----G----ATCGC-----AT----T---GGGGATAGTC----ACGGTGGTGTTAT--TATGTAT--AT-----TA-AA-G----AGACAA-TTCA-T-TTTTC-T----C--GTAG-AAATGA-CTT-AGAAATCAATCGT-C-TA--GAATGCG-T----GTGGGTTGAAATTACTATTAAGCACAGACATATactctt
gi|162652 : TC--AATAGTTCACTACAATGTTCAGAG-TTT---TC---TGCCA-AA---G-AAAGA--------ATT-ACTC--TA--TGCA------G------A---AT-TAT--TCAACTTTGATATATTAGCATTTACCGAGACCTGGTT-AAC--AGACAATG---TGTC-----AAA-CGAT-GAT---ATATTCT----TTGACAAT--TA-TTT-AGTCCCATTTC-GTAAA----G----ACAGA--CC-AT----TA--G---ACGCTC----ATGGTGGTATTAT--TGTATAC--G------TA-AGCG----ATA--A----A-T-TACACGCAATAA--GAAGAACTGAA-CTT--G-AACCCAATAA-TATC--GAATGCT-T----ATGGATAGAAactctt
gi|162666 : ttatgactttggaattacataatgtgtgttgatttaaatatgtacagggcgagaataggaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgTC--AATAGTTCACTACAATGTCCAGAG-TTT---TC---TGCCA-AA---G-AAAGA--------TTT-ACTC--TA--TGCA------G------A---AT-TAT--TTAACTTTGATATATTAGCATTTACCGAGACCTGGTT-AAC--AGACAATG---TGTC-----AAA-CGAT-GAT---ATATTCT----TTGACAAT--TA-TTT-AGTCCCATTTC-GTAAA----G----ACAGA--CC-AT----TA--G---ACGCTC----ATGGTGGTATTAT--TGTATAC--G------TA-AGCG----ATA--A----A-T-TACACGCAATAA--GAAGAACTGAA-CTT--G-AACCCAATAA-TATC--GAATGCT-T----ATGGATAGAA
gi|162665 : TC--AATAGTTCACTACATTGTCCAGAGTTTT---CG---G-CCA-AA---G-AAAGA--------TTT-ACTC--TA--TGCA------G------A---AT-TAT--TCAACTTTGATATATTAGCATTTACCGAGACCTGGTT-AAC--AGACAATG---TGTC-----AAA-CGAT-GAT---ATATTCT----TTGACAAT--TA-TTT-AGTACCATTTC-GTAAA----G----ACAGA--CC-AT----TA--G---ACGCTC----ATGGTGGTATTAT--TGTATAC--G------TA-AGCG----ATA--A----A-T-TACACGCAATAA--GAAGAACTGAA-CTT--G-AACCCAATAA-TATC--GAATGCT-T----ATGGATAGAA
gi|162653 : TC--AATTGTTCAATATAATGTTCAAAG-TTT---TA---T-TCACAA---G-AAAGA--------CAT-TCTG--TA--CGCA------G------AACTTT-TACA---A--TTTGATATATTAGTATTTACAGAGACTTGGCT-AAT--A-
Alignments
lowQualScore : 1111 111 11 1111 11 11 11111 111 1111111 111111 111 2222222222222222222 111 333333333333333 111 22222222222222222222222222222 1111 333333333 222222 11111 22222222222222222222222222222 11 333333333333333 1 111111 222222 1
lowQualScore : 7777 0 1 6 1 4 4 1 66 8 8 2 1 1 2 777 33 5555 55 00 0 2 6 99 44 0 2 3 1 44444 6 888 6 33 3333333 0 000000 2 111 6 33 0 0000000000000000000 44 9 111 0 0 6666 666 888 6 1 555 2 22 99 222222222222222 2 22 000 2 99999999999999999999999999999 66 4444 666666666 4 1 1 0 888888 6 8888 11111 1 88888888888888888888888888888 8888 11 77 1 3 88888 1 1 4444 222222222222222 1 0 3 1 1 1 333 0 999999 22 1 3 666666 0 6 1 4 55 6 4 1 2 0 22 4444 1 1 1 1 222 1 3 2
lowQualScore : .... . . . . . . . .. . . . . . . ... .. .... .. .. . . . .. .. . . . . ..... . ... . .. ....... . ...... . ... . .. . ................... .. . ... . . .... ... ... . . ... . .. .. ............... . .. ... . ............................. .. .... ......... . . . . ...... . .... ..... . ............................. .... .. .. . . ..... . . .... ............... . . . . . . ... . ...... .. . . ...... . . . . .. . . . . . .. .... . . . . ... . . .
lowQualScore : 0000 8 0 0 2 4 4 1 11 9 9 9 1 9 5 555 88 5555 00 00 2 1 7 22 55 4 3 3 0 44444 7 444 7 22 0000000 4 555555 0 777 7 99 8 0000000000000000000 55 2 555 2 8 4444 555 888 2 2 888 5 88 44 444444444444444 0 88 555 4 22222222222222222222222222222 33 3333 555555555 0 0 0 6 999999 0 9999 11111 5 44444444444444444444444444444 1111 33 11 0 1 44444 0 5 5555 666666666666666 0 1 3 1 0 0 222 5 111111 33 0 0 222222 6 3 0 2 11 3 2 0 0 3 99 5555 0 1 0 0 444 0 0 1
consensus : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATCCGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-CCA-A--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T-C-G--TTT-GATATATTAGCNTTCACNGAAACCTGGCT-AAT--A-AC----GATACNNCT-ACATCG--G---AT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGG----ATCGC--CCGATT---G---ACAGNCACGGCGGTGTCATTGTNTAC-GTTAAG-GATACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
Reference ( family-790 ) : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCGTCTAGT-ACATCCGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAGAGCTTT---TC---T-CCA-A--A---GANACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T-C-A--TTT-GATATATTAGCNTTCACNGAAACCTGGCT-AAT--A-AC----GATACGNCT-ACATCG--G---AT---------CTNNCCT----TTTC--CAAC--TA--CCANANACCNTTCCGNAAGG----ATCGC--CCGATT---G---ACAGNCACGGCGGTGTTATNGTNTAT-GTTAAG-GATACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AA-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACATAAACCTATTCTGTT
gi|162647 : TATTTCTGCTATTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTTTTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTCCGATTTGA-------GTTCC-GC--TCGT---CA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-CCA-A--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT-C-A--TTT-GATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-AC----AATACACCT-ACATCG--G---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGG----ATCGC--CCGACT---G---ACAGATACGGCGCTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162648 : TATTTCC----TTTCTACTCGTATGATCACATGTTCCACTGAGGATACTCGCTCACACAGACTAATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---TTTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTCCGATTTGA-------GTTCCGGC--TCGT---TA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-CCA-A--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT-C-A--TTA-GATGTATTGGCGTTCACGGAAACCTGGTTGAAT--A-AC----AATACACCT-ACATCG--G---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGCAAGG----ATCGC--CCGACT---G---ACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162649 : TATTTCC----TCTCTTCTCGTATGATCACATGTCCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTAACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTATCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACGTCCGATTTGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---TC---T-CCA-A--A---GAAACAC--------CA---AC--TG---------TAATCTGA---TTTATGCT-C-A--TTT-GATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-AC----AATACACCT-ACATCG--G---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACTCTTCCGTAAGG----ATCGC--CCGACT---G---ACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-TTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGCTAGAATTGAAAGTGAAACATAAACCTATTTTGTT
gi|162650 : TATTTCC----TTTCATCTCGTATGATCACATGTTCCACGGAGGTTATTCGCTT---C-GACTTATCACCCTGGTATTACATAATGTGTATTGATATATCTGTATACAGAGCGAGAGTGGGT-CT-CTTTGGTCAC--TAT-AA-ACTCAATCAAAAAGGGTTTAAACCGATTAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATACGGTTTAC-T--TATT-CTGTCCAGTGACGTCCACGAA-AATCCAGGTCC----AGC-TTCATCAAGT-ACTTCCGAATTGA-------GTTCCGGC--TCGT---CA-TCCACTTTGTC-----TTC-----------CGGATC-ATTT-GA--CCTCGC-A--GAA--CTT--ATTTC-TAGC--CT-TCTG--TTATTTGTTCATCATAATGTCCAAAGCTTT---GC---T-CCA-A--A---GATACAC--------CA---AC--TG---------TATACTGA---TTTATGCT-C-A--TTT-GATGTATTGGCTTTCACGTACACCTGGTTGAAT--A-AC----AATACACCT-ACATCG--G---AT---------CTTGCCT----TTTC--CATC--TA--CCAAACACCCTT-TGTAAGG----ATCGC--CCGATT---G---ACAGATATTGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CAGCTC-C----CGAAG-GCAAGA-CTA-AG-AG-GTAAACGACATT--GAATGTAT----ATTGTTAGAATTGAAAGTGAATCATAAACCTATTCTGTT
gi|162651 : TACTTCT----TTTCTTCTCGCATGATCACATGTCCCTCGGAGGATACTCGCTCACTCTGACTTATCGCCCTAGTATTACATAATGTGTATAGATACATCTGCTCACAGAGCGAGAGTTGGT-CT-GTTTGGTCAC--TAT-CA-ACT----CAAAAAGGTCTTAAACCGATGAACAGTTTTG---ATTT--GATTAT----TTGG--CT--TTCCATTTTAC-T--TATA-CTGTCCGGTGACGTCCACAAACAATCCTGGTCC----AGC-TTGATGTAGT-ACATCCGATTTGA-------G-----------------A-T-----------------C-----------CGGATG-AGTT-GG--CTTTTC-G--GAA--CTT--ATTGC-TAGC--AA-TCTCTTTTATTTGTTCATTATAATGTCAAAAGATTT---GC---C-ACA-A--C---AATACAC--------CA---AC--TG---------TATGCTGA---TTTGTGCT-C-A--TTT-GATGTATTGGCTTTCGCGGAAACCTGGTTAAAT--A-AC----AACAGATCT-ACATCA--T---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGG----ATCGC--CCGACT---G---ACAGATATGGCGGTGTTCTAGTCTAT-GTAAAA-GATACGA-T-CA-CTGCTCGC----CGAAA-GCATGT-CTT-AG-AG-TCAAACGACATT--GAATGTAT----ATGCTTTGAATTGAAAGTGAAGCATAAAACTATTTTGTT
gi|162652 : TTATGACTTTGGAATTACATAATGTGTGTTGATTTAAATATGTACAGGGCGAGAATAGG
gi|162652 : --TCAATAGTTCACTACAATGTTCAGAG-TTT---TC---TGCCA-A--A---GAAAGAA--------TT---AC--TC---------TATGCAGA---ATTAT--T-C-AACTTT-GATATATTAGCATTTACCGAGACCTGGTT-AAC--AGAC----AATGTGTC--AAA-CGATG---AT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAG----ACAGA--CC-ATTA--G---ACGCTCATGGTGGTATTATTGTATAC-G-TAAGCGATA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAAaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgtcaatagttcactacaatgttcagagttttctgccaaagaaagaattactctatgcagaattattcaactttgatatattagcatttaccgagacctggttaacagacaatgtgtcaaacgatgatatattctttgacaattatttagtcccatttcgtaaagacagaccattagacgctcatggtggtattattgtatacgtaagcgataaattacacgcaataagaagaactgaacttgaacccaataatatcgaatgcttatggatagaa
gi|162653 : ttatgactttggaattacataatgtgtgttgatttaaatatgtacagggcgagaataggaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgCTGGAATAATATAATGTCTACTGACATAATTGTTTATAGAATCCGAATAGGT-TT-GTTTGGTC-CTGTAT-CT-TCTTAAGCAAAAGG
gi|162653 : --TCAATTGTTCAATATAATGTTCAAAG-TTT---TA---T-TCACA--A---GAAAGAC--------AT---TC--TG---------TACGCAGAACTTTTACA-----A--TTT-GATATATTAGTATTTACAGAGACTTGGCT-AAT--A-tacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattatcaattgttcaatataatgttcaaagttttattcacaagaaagacattctgtacgcagaacttttacaatttgatatattagtatttacagagacttggctaata
gi|162654 : ctggaataatataatgtctactgacataattgtttatagaatccgaataggtttgtttggtcctgtatcttcttaagcaaaaggtacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattaTGGTATAACATAATAGCTATAGATATTTCTGTATATAGGGTGAGGATAGGTAAA-TTTTG--CAT--TATACAGGCTAAATC-CAAAGGCTTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATTTGAT
gi|162654 : ATATATTT-GA----TCTC-ACTAAA--CA---AT--C-TAAC---A-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-CAG-A--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A-C-AC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTTAGTCCA-ACTACTGATACAAATGACATT-------AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATG----ACAGA--CGTTTT---G---ATGCTCATGGGGGAATTCTTGTATAT-ATAAAT-AACA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATCATTTTGTTctcactaaacaatctaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgatgctcatgggggaattcttgtatatataaataacagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaatcattttgtt
gi|162655 : tggtataacataatagctatagatatttctgtatatagggtgaggataggtaaattttgcattatacaggctaaatccaaaggctttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaTGGTATAACATAATGGCTATAGATATTTCTGTATATAGGGTGAGGATAGGT-ATATTTTG--CAT--TATACAGGCTAAATC-CAAAGGCCTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATCTGAT
gi|162655 : --CA-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-CAG-A--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A-C-AC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTTAGTCCA-ACTACTGATACAAATGACATT-------AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATG----ACAGA--CGTTTT---G---ACGCTCATGGGGGAATTCTTAAATAT-A-TAAGTAATA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATAATTTTGTTctcactaaacaatccaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgacgctcatgggggaattcttaaatatataagtaatagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaataattttgtt
gi|162656 : tggtataacataatggctatagatatttctgtatatagggtgaggataggtatattttgcattatacaggctaaatccaaaggccttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatatatctgatctcactaaacaatccaaTATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-AATCAAGCAAAAAGGGTTTAAACCGATGAACAATTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACATCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACATCAGATTTGA-------GTTCCGGC--TCTT---CA-TCCATTTTGTT-----TTC-----------CGGATC-ATTT-GA--CATTTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAGGCTTT---GC---C-CCA-A--A---GATACAC--------CA---AC--TG---------TG------------------------TT-GATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-AC----AATACACGT-ACATCG--G---AT---------CTTGCAT----TTTC--CAAC--TA--CCAAACACCCATCCGTAAGG----ATCGC--TCGACT---A---ACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTATGTGCATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162657 : AC----TTGGACCT--A--CATTCTAC-TGCTGAC-TTGT--GGAGATATTCACCCA-AACCCAGGTCCTATAAGC-T----CAACT-GCAACCAAC---A-------ACTCAGTT--TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-G-------------GAAGCCTTGGACTTT-TAACATCA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTATTAGATA---T-T-A-ATTA---GATACA--------------AT--T----------TACTTTGA---ACTATA-T-GGA--TTC-GATATATTAGCTTTCTATGAAACTTGGCT---T--A-AT----GATACTATT-GCATC-------AT---------CTGATCTAGAATTCC--CAGCG-TT--CCATAAACCAATAAGAAAAG----ATCGC-----GTT---GGAGATAGCCACGGTGGTGTTATTATGTAC-ATTAAA-GATACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-AG-AAATCAATCGTC-TG--GAATGCAT----ATGGGTTGAACTTACTATTAAACACAGACATATACT
gi|162658 : AC----TTGG--CT--ATCGGTCATA--T--TGTTGTTATCAGGAGATGTACACCCA-AACCCAGGCCC------CATTGAACTACTTATATCTGATACAA-------GCTCTGTCAGTAGTACTCAATCCACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-ATA-A--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T-G-G--TTTTGATATACTTACTTTTACTGAAACATGGCT---C--G-AT----GATTCTGTT-TCAACT--G---ATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAG----ATCGC-----ATT---GGAGACAACCACGGAGGGGTCATGTTATTC-ATTAAA-GACACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162659 : AC----TTGG--CT--ATCAGTCATA--T--TGTTGTTATCAGGAGATGTGCACCCA-AACCCAGGCCC------CATTGAACTACTTACATCTGATACAA-------GCTCTGTCAGTAGTACTCAATCTACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-ATA-A--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T-G-G--TTTTGATATACTTACTTTTACTGAAACATGGCT---C--G-AT----GATTCTGTT-TCAACT--G---ATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAG----ATCGC-----ATT---GGAGACTACCACGGAGGGGTCATGTTATTC-ATTAAA-GACACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162660 : TTTAC-TGTTGTT-TTG--CGGAGATATTCATCCA-AATCCAGGTCC----AGG-TTC---T-GT-ATAACCAACTCCAACAAACAGTTC--AT--TC-T---CA-T---TTTCTTCAACTTTTT-----------CAGATA-GTTTAGAAGCATT---A--GA---CTT--GTCACATAAT--TAATCTC--TC----GTTCACTATAATGTTCAGAG--TA---TCAAAT-CTA-A--ACTGGATACAC--------T-----T--TG---------TA--CCGA---ATTATA-TGG-G--TTT-GATATTCTAACTTTCTCTGAAACTTGGCT---T--A-AC----GACTCTGTT-ATGTCA--G---CTGAA------CTAAACT----TT----CAATCGTT--TCATA-ACC---CCGAAAGAAAATATCGC-----ATTGGAG---ATAGTCATGGAGGTGTTATTATGTATAAACAAGAAATACT--T-CA--TATTTTT----CGTAG-ACAAGA-CCT-CGAAA-TCAATCG---TTTAGAATGTAT----TTGGGTGGAAATATCAATTAAACACAAACACATACTAT
gi|162661 : --TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-GG--AAGCCT-T--GGA--CTT----TTC-ACAT--CA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT---------------A--A---GATATAAATTAGATACA---AT--T----------TACTCTGA---ACTATA-T-GGA--TTT-GATATATTAGCTTTCTCTGAAACTTGGCT---T--A-AT----GATACTATT-GCATC-------AT---------CTGATCTAGAATTCC--CAGCA-TT--CCATAAACCAATAAGAAAAG----ATCGC-----GTT---GGAGATAGCCATGGTGGTGTTATTATGTAC-ATTAAA-GATACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-TG-AAATCAATCGTC-TG--GAATGCAT----ATGGATTGAACTTACTATTAAACACAGACATATACT
gi|162662 : ---CA-TCCATTTCATC-----TTCTTCGTTCCTATCAGATA-GTTT-GG--AAGCCT-A--TGA--CTT--GTCACATA-----A-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT------------CA-A--A---TATAAAT--------TAGATACAATC---------TACTCTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTCCGAAACTTGGCT---T--A-AT----GATACTGCT-GCGTCA--GCTGAT---------CTAGAAT----TT----CAAT--CATTCCCTCAACCAATAAGAAATG----ATCGCATTCGA-----G---ATAGCCACGTTGGTGTCATTATAAAT-ATTAAA-GAGACAATT-TATTTTCTCGT------AAA-A-ATGA-CTTAAA-AA-TCAATCGTC-TT--GAATGCGT----TTTGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162663 : A-TCTT--TCTCTTATTCATTATAATGTTCCAAG--TA---TCAAAT-ACA-A--ATTAGATACA--------------A---TC---------TACACTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTTCGAAACTTGGCT---T--A-AT----GATACTGTT-GCGTCA--G--------------CTGATCTAGAATTTC--CATCA-TT--CCATAAACCAATAAGAAAAG----ATCGC-----ATT---GGGGATAGCCACGGTGGTGTTATTATGTAT-ATTAAG-GAGACAA-TTCA-TTTTTC-T----CGTAG-ACATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----ATGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162664 : A-TCTT--TCTCTTGTGCATTATAATGTTCAAAG--TA---TCAAAT-ACA-A--ATTAGATACA--------------A---TC---------TACTCTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTCCGAAACTTGGCT---T--A-AT----GATACTGTT-GCGTCA--G--------------CTGATCTAGAATTTC--CATCA-TT--CCATAAACCAATAAGAAAAG----ATCGC-----ATT---GGGGATAGTCACGGTGGTGTTATTATGTAT-ATTAAA-GAGACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----GTGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162665 : --TCAATAGTTCACTACATTGTCCAGAGTTTT---CG---G-CCA-A--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTAT--T-C-AACTTT-GATATATTAGCATTTACCGAGACCTGGTT-AAC--AGAC----AATGTGTC--AAA-CGATG---AT---------ATATTCT----TTGA--CAAT--TA--TTTAGTACCATTTCGTAAAG----ACAGA--CC-ATTA--G---ACGCTCATGGTGGTATTATTGTATAC-G-TAAGCGATA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
gi|162666 : --TCAATAGTTCACTACAATGTCCAGAG-TTT---TC---TGCCA-A--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTATT-T-A-AC-TTT-GATATATTAGCATTTACCGAGACCTGGTT-AAC--AGAC----AATGTGTC--AAA-CGATG---AT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAG----ACAGA--CC-ATTA--G---ACGCTCATGGTGGTATTATTGTATAC-G-TAAGCGATA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
Alignments
lowQualScore : 1111 111 11 1111 11 11 11111 1111111 111111 111 2222222222222222222 111 3333333333333333 111 33333333333333333333333333333 1111 444444444 222222 2222222222222222222 1111 11 3333333333333 111 22222222222 1
lowQualScore : 7777 0 1 6 1 4 4 1 66 8 8 2 1 1 2 777 33 5555 55 00 0 2 6 99 44 0 2 3 1 44444 6 999 6 44 0 3333333 333333 2 111 6 33 0 0000000000000000000 44 9 111 0 0 6666 666 888 6 1 555 2 22 99 2222222222222222 44 000 2 00000000000000000000000000000 55 4444 111111111 4 1 1 0 888888 6 8888 44444 1 7777777777777777777 999999999 3333 11 77 1 3 66 55 1 1 4444 2222222222222 1 0 3 1 1 1 0 22 8 2 44 888 22 1 3 55555555555 0 6 1 4 55 4 6 1 2 0 22 4444 1 1 1 1 222 1 1 1
lowQualScore : .... . . . . . . . .. . . . . . . ... .. .... .. .. . . . .. .. . . . . ..... . ... . .. . ....... ...... . ... . .. . ................... .. . ... . . .... ... ... . . ... . .. .. ................ .. ... . ............................. .. .... ......... . . . . ...... . .... ..... . ................... ......... .... .. .. . . .. .. . . .... ............. . . . . . . . .. . . .. ... .. . . ........... . . . . .. . . . . . .. .... . . . . ... . . .
lowQualScore : 0000 8 0 0 2 4 4 1 11 9 9 9 1 9 5 555 88 5555 00 00 2 1 7 22 55 4 3 3 0 44444 7 777 7 66 7 0000000 999999 0 777 7 99 8 0000000000000000000 55 2 555 2 8 4444 555 888 2 2 888 5 88 44 8888888888888888 88 555 4 77777777777777777777777777777 00 3333 000000000 0 0 0 6 999999 0 9999 88888 5 5555555555555555555 555555555 3333 33 11 0 1 88 11 0 5 5555 6666666666666 0 1 3 1 7 0 1 22 4 1 33 666 33 0 0 44444444444 6 3 0 2 11 2 3 0 0 3 99 5555 0 1 0 0 444 0 0 0
consensus : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGCT-AAT--A-AC----GATACNNCT-ACATCG---G---AT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGC--CCGATT-GG-GACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGA-T-CA-CTNCTCGC----C----GAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
Reference ( family-790 ) : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGCT-AAT--A-AC----GATACNNCT-ACATCG---G---AT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGC--CCGATT-G---ACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGA-T-CA-CTNCTCGC----C----GAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
gi|162647 : TATTTCTGCTATTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTTTTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCC-GC--TCGT---CA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-AC----AATACACCT-ACATCG---G---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGGA----TCGC--CCGACT-G---ACAGATACGGCGCTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CCGCTCGC----C----GAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162648 : TATTTCC----TTTCTACTCGTATGATCACATGTTCCACTGAGGATACTCGCTCACACAGACTAATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---TTTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---TA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTA-GATGTATTGGCGTTCACGGAAACCTGGTTGAAT--A-AC----AATACACCT-ACATCG---G---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGCAAGGA----TCGC--CCGACT-G---ACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CCGCTCGC----C----GAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162649 : TATTTCC----TCTCTTCTCGTATGATCACATGTCCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTAACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTATCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GAAACAC--------CA---AC--TG---------TAATCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-AC----AATACACCT-ACATCG---G---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACTCTTCCGTAAGGA----TCGC--CCGACT-G---ACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-TTGCTCGC----C----GAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGCTAGAATTGAAAGTGAAACATAAACCTATTTTGTT
gi|162650 : TATTTCC----TTTCATCTCGTATGATCACATGTTCCACGGAGGTTATTCGCTT---C-GACTTATCACCCTGGTATTACATAATGTGTATTGATATATCTGTATACAGAGCGAGAGTGGGT-CT-CTTTGGTCAC--TAT-AA-ACTCAATCAAAAAGGGTTTAAACCGATTAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATACGGTTTAC-T--TATT-CTGTCCAGTGACGTCCACGAA-AATCCAGGTCC----AGC-TTCATCAAGT-ACTTC--CGAATTGA-------GTTCCGGC--TCGT---CA-TCCACTTTGTC-----TTC-----------CGGATC-ATTT-GA--CCTCGC-A--GAA--CTT--ATTTC-TAGC--CT-TCTG--TTATTTGTTCATCATAATGTCCAAAGCTTT---GC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TATACTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGTACACCTGGTTGAAT--A-AC----AATACACCT-ACATCG---G---AT---------CTTGCCT----TTTC--CATC--TA--CCAAACACCCTTT-GTAAGGA----TCGC--CCGATT-G---ACAGATATTGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CAGCTC-C----C----GAAG-GCAAGA-CTA-AG-AG-GTAAACGACATT--GAATGTAT----ATTGTTAGAATTGAAAGTGAATCATAAACCTATTCTGTT
gi|162651 : TACTTCT----TTTCTTCTCGCATGATCACATGTCCCTCGGAGGATACTCGCTCACTCTGACTTATCGCCCTAGTATTACATAATGTGTATAGATACATCTGCTCACAGAGCGAGAGTTGGT-CT-GTTTGGTCAC--TAT-CA-ACT----CAAAAAGGTCTTAAACCGATGAACAGTTTTG---ATTT--GATTAT----TTGG--CT--TTCCATTTTAC-T--TATA-CTGTCCGGTGACGTCCACAAACAATCCTGGTCC----AGC-TTGATGTAGT-ACATC--CGATTTGA-------G-----------------A-T-----------------C-----------CGGATG-AGTT-GG--CTTTTC-G--GAA--CTT--ATTGC-TAGC--AA-TCTCTTTTATTTGTTCATTATAATGTCAAAAGATTT---GC---C-A-CAA--C---AATACAC--------CA---AC--TG---------TATGCTGA---TTTGTGCT--CA--TTT-GATGTATTGGCTTTCGCGGAAACCTGGTTAAAT--A-AC----AACAGATCT-ACATCA---T---AT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGGA----TCGC--CCGACT-G---ACAGATATGGCGGTGTTCTAGTCTATGT-AAAA-GA-TACGA-T-CA-CTGCTCGC----C----GAAA-GCATGT-CTT-AG-AG-TCAAACGACATT--GAATGTAT----ATGCTTTGAATTGAAAGTGAAGCATAAAACTATTTTGTT
gi|162652 : TTATGACTTTGGAATTACATAATGTGTGTTGATTTAAATATGTACAGGGCGAGAATAGG
gi|162652 : --TCAATAGTTCACTACAATGTTCAGAG-TTT---TC---TGC-CAA--A---GAAAGAA--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGTT-AAC--AGAC----AATGTGTC--AAA-CGAT-G---AT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAGA----CAGA--CC-ATTAG---ACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAA----GAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAAaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgtcaatagttcactacaatgttcagagttttctgccaaagaaagaattactctatgcagaattattcaactttgatatattagcatttaccgagacctggttaacagacaatgtgtcaaacgatgatatattctttgacaattatttagtcccatttcgtaaagacagaccattagacgctcatggtggtattattgtatacgtaagcgataaattacacgcaataagaagaactgaacttgaacccaataatatcgaatgcttatggatagaa
gi|162653 : ttatgactttggaattacataatgtgtgttgatttaaatatgtacagggcgagaataggaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgCTGGAATAATATAATGTCTACTGACATAATTGTTTATAGAATCCGAATAGGT-TT-GTTTGGTC-CTGTAT-CT-TCTTAAGCAAAAGG
gi|162653 : --TCAATTGTTCAATATAATGTTCAAAGTTTT---AT---T-CACAAG-A---AAGACAT--------T-----C--TG---------TACGCAGAACTTTTACA-----A--TTT-GATATATTAGTATTTACAGAGACTTGGCT-AAT--A-tacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattatcaattgttcaatataatgttcaaagttttattcacaagaaagacattctgtacgcagaacttttacaatttgatatattagtatttacagagacttggctaata
gi|162654 : ctggaataatataatgtctactgacataattgtttatagaatccgaataggtttgtttggtcctgtatcttcttaagcaaaaggtacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattaTGGTATAACATAATAGCTATAGATATTTCTGTATATAGGGTGAGGATAGGTAAA-TTTTG--CAT--TATACAGGCTAAATC-CAAAGGCTTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATT--TGAT
gi|162654 : ATATATTT-GA----TCTC-ACTAAA--CA---AT--C-TAAC---A-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTTAGTCCA-ACTACTGATACAAATGACATT--------AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATGA----CAGA--CGTTTT-G---ATGCTCATGGGGGAATTCTTGTATATAT-AAAT-AA-CA-GA------CTACATGC----GATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATCATTTTGTTctcactaaacaatctaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgatgctcatgggggaattcttgtatatataaataacagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaatcattttgtt
gi|162655 : tggtataacataatagctatagatatttctgtatatagggtgaggataggtaaattttgcattatacaggctaaatccaaaggctttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaTGGTATAACATAATGGCTATAGATATTTCTGTATATAGGGTGAGGATAGGT-ATATTTTG--CAT--TATACAGGCTAAATC-CAAAGGCCTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATC--TGAT
gi|162655 : --CA-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTTAGTCCA-ACTACTGATACAAATGACATT--------AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATGA----CAGA--CGTTTT-G---ACGCTCATGGGGGAATTCTTAAATATAT--AAGTAA-TA-GA------CTACATGC----GATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATAATTTTGTTctcactaaacaatccaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgacgctcatgggggaattcttaaatatataagtaatagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaataattttgtt
gi|162656 : tggtataacataatggctatagatatttctgtatatagggtgaggataggtatattttgcattatacaggctaaatccaaaggccttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatatatctgatctcactaaacaatccaaTATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-AATCAAGCAAAAAGGGTTTAAACCGATGAACAATTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACATCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACATC--AGATTTGA-------GTTCCGGC--TCTT---CA-TCCATTTTGTT-----TTC-----------CGGATC-ATTT-GA--CATTTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAGGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TG------------------------TT-GATGTATTGGCTTTCACGGAAACCTGGTTGAAT--A-AC----AATACACGT-ACATCG---G---AT---------CTTGCAT----TTTC--CAAC--TA--CCAAACACCCATCCGTAAGGA----TCGC--TCGACT-A---ACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CTGCTCGC----C----GAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTATGTGCATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162657 : AC----TTGGACCT--A--CATTCTAC-TGCTGAC-TTGT--GGAGATATTCACCCA-AACCCAGGTCCTATAAGC-T-CAACT-GC-A-ACCAACAACTC-A-------GTT-------TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-G-------------GAAGCCTTGGACTTT-TAACATCA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTATTAGATA---T-T--AATTA---GATACA--------------AT--T----------TACTTTGA---ACTATA-T--GGA-TTC-GATATATTAGCTTTCTATGAAACTTGGCT---T--A-AT----GATACTATT-GCATC--------AT---------CTGATCTAGAATTCC--CAGCG-TT--CCATAAACCAATAAGAAAAGA----TCGC-----GTT-GGAGATAGCCACGGTGGTGTTATTATGTACAT-TAAA-GA-TACAA-TTCA-TTTTTC-T----C----GTAG-AAATGA-CTT-AG-AAATCAATCGTC-TG--GAATGCAT----ATGGGTTGAACTTACTATTAAACACAGACATATACT
gi|162658 : AC----TTGG--CT--ATCGGTCATA--T--TGTTGTTATCAGGAGATGTACACCCA-AACCCAGGCCC------CATTGAACTACTTATATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCCACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGCT---C--G-AT----GATTCTGTT-TCAACT---G---ATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAGA----TCGC-----ATT-GGAGACAACCACGGAGGGGTCATGTTATTCAT-TAAA-GA-CACAA-TACA-CTAC-AAA----C----GTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162659 : AC----TTGG--CT--ATCAGTCATA--T--TGTTGTTATCAGGAGATGTGCACCCA-AACCCAGGCCC------CATTGAACTACTTACATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCTACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGCT---C--G-AT----GATTCTGTT-TCAACT---G---ATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAGA----TCGC-----ATT-GGAGACTACCACGGAGGGGTCATGTTATTCAT-TAAA-GA-CACAA-TACA-CTAC-AAA----C----GTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162660 : TTTAC-TGTTGTT-TTG--CGGAGATATTCATCCA-AATCCAGGTCC----AGG-TTC---T-GT-ATAAC--CAACTCCAACAAACAGTTC--AT--TC-T---CA-T---TTTCTTCAACTTTTT-----------CAGATA-GTTTAGAAGCATT---A--GA---CTT--GTCACATAAT--TAATCTC--TC----GTTCACTATAATGTTCAGAG--TA---TCAAAT-C-TAA--ACTGGATACAC--------T-----T--TG---------TAC--CGA---ATTATA-T--GGG-TTT-GATATTCTAACTTTCTCTGAAACTTGGCT---T--A-AC----GACTCTGTT-ATGTCA---G---CTGAA------CTAAACT----TT----CAATCGTT--TCATA-ACCC---CGAAAGAAAATATCGC-----ATT-GGAGATAGTCATGGAGGTGTTATTATGTATAAACAAG-AAATACT--T-CA--TATTTTT----C----GTAG-ACAAGA-CCT-CG-AAATCAATCG---TTTAGAATGTAT----TTGGGTGGAAATATCAATTAAACACAAACACATACTAT
gi|162661 : --TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-GG--AAGCCT-T--GGA--CTT----TTC-ACAT--CA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT---------------A--A---GATATAAATTAGATACA---AT--T----------TACTCTGA---ACTATA-T--GGA-TTT-GATATATTAGCTTTCTCTGAAACTTGGCT---T--A-AT----GATACTATT-GCATC--------AT---------CTGATCTAGAATTCC--CAGCA-TT--CCATAAACCAATAAGAAAAGA----TCGC-----GTT-GGAGATAGCCATGGTGGTGTTATTATGTACAT-TAAA-GA-TACAA-TTCA-TTTTTC-T----C----GTAG-AAATGA-CTT-TG-AAATCAATCGTC-TG--GAATGCAT----ATGGATTGAACTTACTATTAAACACAGACATATACT
gi|162662 : ---CA-TCCATTTCATC-----TTCTTCGTTCCTATCAGATA-GTTT-GG--AAGCCT-A--TGA--CTT--GTCACATA-----A-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT-------------CAA--A---TATAAAT--------TAGATACAATC---------TACTCTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTCCGAAACTTGGCT---T--A-AT----GATACTGCT-GCGTCAGCTG---AT---------CTAGAAT----TT----CAAT--CATTCCCTCAACCAATAAGAAATGA----TCGCATTCGA---G---ATAGCCACGTTGGTGTCATTATAAATAT-TAAA-GA-GACAATT-TATTTTCTCGT----------AAA-A-ATGA-CTTAAA-AA-TCAATCGTC-TT--GAATGCGT----TTTGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162663 : A-TCTT--TCTCTTATTCATTATAATGTTCCAAG--TA---TCAAAT-A-CAA--ATTAGATACA--------------A---TC---------TACACTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTTCGAAACTTGGCT---T--A-AT----GATACTGTT-GCGTCA---GCTGAT---------CTAGAAT----TT-C--CATCA-TT--CCATAAACCAATAAGAAAAGA----TCGC-----ATT-GGGGATAGCCACGGTGGTGTTATTATGTATAT-TAAG-GA-GACAA-TTCA-TTTTTC-T----C----GTAG-ACATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----ATGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162664 : A-TCTT--TCTCTTGTGCATTATAATGTTCAAAG--TA---TCAAAT-A-CAA--ATTAGATACA--------------A---TC---------TACTCTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTCCGAAACTTGGCT---T--A-AT----GATACTGTT-GCGTCA---GCTGAT---------CTAGAAT----TT-C--CATCA-TT--CCATAAACCAATAAGAAAAGA----TCGC-----ATT-GGGGATAGTCACGGTGGTGTTATTATGTATAT-TAAA-GA-GACAA-TTCA-TTTTTC-T----C----GTAG-AAATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----GTGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162665 : --TCAATAGTTCACTACATTGTCCAGAGTTTT---CG---G-C-CAA--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGTT-AAC--AGAC----AATGTGTC--AAA-CGAT-G---AT---------ATATTCT----TTGA--CAAT--TA--TTTAGTACCATTTCGTAAAGA----CAGA--CC-ATTAG---ACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAA----GAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
gi|162666 : --TCAATAGTTCACTACAATGTCCAGAG-TTT---TC---TGC-CAA--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTATT-TAAC---TTT-GATATATTAGCATTTACCGAGACCTGGTT-AAC--AGAC----AATGTGTC--AAA-CGAT-G---AT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAGA----CAGA--CC-ATTAG---ACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAA----GAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
Alignments
lowQualScore : 1111 111 11 1111 11 11 11111 1111111 111111 111 2222222222222222222 111 3333333333333333 111 33333333333333333333333333333 1111 444444444 222222 2222222222222222 111111111 11 4444444444 1 111111 222222 1
lowQualScore : 7777 0 1 6 1 4 4 1 66 8 8 2 1 1 2 777 33 5555 55 00 0 2 6 99 44 0 2 3 1 44444 6 999 6 44 0 3333333 333333 2 111 6 33 0 0000000000000000000 44 9 111 0 0 6666 666 888 6 1 555 2 22 99 2222222222222222 111 333 2 00000000000000000000000000000 55 4444 111111111 4 1 1 0 4 444444 6 8888 44444 1 7777777777777777 444444444 8888 11 77 1 3 77 44 1 1 4444 5555555555 1 0 3 1 1 1 3333 0 999999 22 1 3 666666 0 6 1 4 55 6 4 1 2 0 22 4444 1 1 1 1 222 1 1 1
lowQualScore : .... . . . . . . . .. . . . . . . ... .. .... .. .. . . . .. .. . . . . ..... . ... . .. . ....... ...... . ... . .. . ................... .. . ... . . .... ... ... . . ... . .. .. ................ ... ... . ............................. .. .... ......... . . . . . ...... . .... ..... . ................ ......... .... .. .. . . .. .. . . .... .......... . . . . . . .... . ...... .. . . ...... . . . . .. . . . . . .. .... . . . . ... . . .
lowQualScore : 0000 8 0 0 2 4 4 1 11 9 9 9 1 9 5 555 88 5555 00 00 2 1 7 22 55 4 3 3 0 44444 7 777 7 66 7 0000000 999999 0 777 7 99 8 0000000000000000000 55 2 555 2 8 4444 555 888 2 2 888 5 88 44 8888888888888888 888 555 4 66666666666666666666666666666 00 3333 000000000 0 0 0 6 0 999999 0 9999 88888 5 5555555555555555 777777777 1111 33 11 0 1 55 33 0 5 5555 9999999999 0 1 3 1 7 0 3333 5 111111 33 0 0 222222 6 3 0 2 11 3 2 0 0 3 99 5555 0 1 0 0 444 0 0 0
consensus : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA---A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGG----ATCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTAC-GTTAAG-GATACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
Reference ( family-790 ) : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA---A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGG----ATCGCCCGATT-GG-GACAGNCACGGCGGTGTCATTGTNTAC-GTTAAG-GATACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
gi|162647 : TATTTCTGCTATTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTTTTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCC-GC--TCGT---CA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA---A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGG----ATCGCCCGACT----GACAGATACGGCGCTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162648 : TATTTCC----TTTCTACTCGTATGATCACATGTTCCACTGAGGATACTCGCTCACACAGACTAATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---TTTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---TA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA---A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTA-GATGTATTGGCGTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGCAAGG----ATCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162649 : TATTTCC----TCTCTTCTCGTATGATCACATGTCCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTAACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTATCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA---A---GAAACAC--------CA---AC--TG---------TAATCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACTCTTCCGTAAGG----ATCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-TTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGCTAGAATTGAAAGTGAAACATAAACCTATTTTGTT
gi|162650 : TATTTCC----TTTCATCTCGTATGATCACATGTTCCACGGAGGTTATTCGCTT---C-GACTTATCACCCTGGTATTACATAATGTGTATTGATATATCTGTATACAGAGCGAGAGTGGGT-CT-CTTTGGTCAC--TAT-AA-ACTCAATCAAAAAGGGTTTAAACCGATTAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATACGGTTTAC-T--TATT-CTGTCCAGTGACGTCCACGAA-AATCCAGGTCC----AGC-TTCATCAAGT-ACTTC--CGAATTGA-------GTTCCGGC--TCGT---CA-TCCACTTTGTC-----TTC-----------CGGATC-ATTT-GA--CCTCGC-A--GAA--CTT--ATTTC-TAGC--CT-TCTG--TTATTTGTTCATCATAATGTCCAAAGCTTT---GC---T-C-CAA---A---GATACAC--------CA---AC--TG---------TATACTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGTACACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CATC--TA--CCAAACACCCTTT-GTAAGG----ATCGCCCGATT----GACAGATATTGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CAGCTC-C----CGAAG-GCAAGA-CTA-AG-AG-GTAAACGACATT--GAATGTAT----ATTGTTAGAATTGAAAGTGAATCATAAACCTATTCTGTT
gi|162651 : TACTTCT----TTTCTTCTCGCATGATCACATGTCCCTCGGAGGATACTCGCTCACTCTGACTTATCGCCCTAGTATTACATAATGTGTATAGATACATCTGCTCACAGAGCGAGAGTTGGT-CT-GTTTGGTCAC--TAT-CA-ACT----CAAAAAGGTCTTAAACCGATGAACAGTTTTG---ATTT--GATTAT----TTGG--CT--TTCCATTTTAC-T--TATA-CTGTCCGGTGACGTCCACAAACAATCCTGGTCC----AGC-TTGATGTAGT-ACATC--CGATTTGA-------G-----------------A-T-----------------C-----------CGGATG-AGTT-GG--CTTTTC-G--GAA--CTT--ATTGC-TAGC--AA-TCTCTTTTATTTGTTCATTATAATGTCAAAAGATTT---GC---C-A-CAA---C---AATACAC--------CA---AC--TG---------TATGCTGA---TTTGTGCT--CA--TTT-GATGTATTGGCTTTCGCGGAAACCTGGT-TAAAT--A-AC----AACAGATCT-ACATCA---TAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGG----ATCGCCCGACT----GACAGATATGGCGGTGTTCTAGTCTAT-GTAAAA-GATACGA-T-CA-CTGCTCGC----CGAAA-GCATGT-CTT-AG-AG-TCAAACGACATT--GAATGTAT----ATGCTTTGAATTGAAAGTGAAGCATAAAACTATTTTGTT
gi|162652 : TTATGACTTTGGAATTACATAATGTGTGTTGATTTAAATATGTACAGGGCGAGAATAGG
gi|162652 : --TCAATAGTTCACTACAATGTTCAGAG-TTT---TC---TGC-CAA---A---GAAAGAA--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAG----ACAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATAC-G-TAAGCGATA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAAaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgtcaatagttcactacaatgttcagagttttctgccaaagaaagaattactctatgcagaattattcaactttgatatattagcatttaccgagacctggttaacagacaatgtgtcaaacgatgatatattctttgacaattatttagtcccatttcgtaaagacagaccattagacgctcatggtggtattattgtatacgtaagcgataaattacacgcaataagaagaactgaacttgaacccaataatatcgaatgcttatggatagaa
gi|162653 : ttatgactttggaattacataatgtgtgttgatttaaatatgtacagggcgagaataggaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgCTGGAATAATATAATGTCTACTGACATAATTGTTTATAGAATCCGAATAGGT-TT-GTTTGGTC-CTGTAT-CT-TCTTAAGCAAAAGG
gi|162653 : --TCAATTGTTCAATATAATGTTCAAAGTTTT---AT---T-CACAAG--A---AAGACAT--------T-----C--TG---------TACGCAGAACTTTTACA-----A--TTT-GATATATTAGTATTTACAGAGACTTGGC-T-AAT--A-tacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattatcaattgttcaatataatgttcaaagttttattcacaagaaagacattctgtacgcagaacttttacaatttgatatattagtatttacagagacttggctaata
gi|162654 : ctggaataatataatgtctactgacataattgtttatagaatccgaataggtttgtttggtcctgtatcttcttaagcaaaaggtacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattaTGGTATAACATAATAGCTATAGATATTTCTGTATATAGGGTGAGGATAGGTAAA-TTTTG--CAT--TATACAGGCTAAATC-CAAAGGCTTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATT--TGAT
gi|162654 : ATATATTT-GA----TCTC-ACTAAA--CA---AT--C-TAAC---A-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA---A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATG----ACAGAC--GTT-TT-GATGCTCATGGGGGAATTCTTGTATAT-ATAAAT-AACA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATCATTTTGTTctcactaaacaatctaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgatgctcatgggggaattcttgtatatataaataacagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaatcattttgtt
gi|162655 : tggtataacataatagctatagatatttctgtatatagggtgaggataggtaaattttgcattatacaggctaaatccaaaggctttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaTGGTATAACATAATGGCTATAGATATTTCTGTATATAGGGTGAGGATAGGT-ATATTTTG--CAT--TATACAGGCTAAATC-CAAAGGCCTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATC--TGAT
gi|162655 : --CA-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA---A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATG----ACAGAC--GTT-TT-GACGCTCATGGGGGAATTCTTAAATAT-A-TAAGTAATA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATAATTTTGTTctcactaaacaatccaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgacgctcatgggggaattcttaaatatataagtaatagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaataattttgtt
gi|162656 : tggtataacataatggctatagatatttctgtatatagggtgaggataggtatattttgcattatacaggctaaatccaaaggccttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatatatctgatctcactaaacaatccaaTATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-AATCAAGCAAAAAGGGTTTAAACCGATGAACAATTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACATCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACATC--AGATTTGA-------GTTCCGGC--TCTT---CA-TCCATTTTGTT-----TTC-----------CGGATC-ATTT-GA--CATTTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAGGCTTT---GC---C-C-CAA---A---GATACAC--------CA---AC--TG---------TG------------------------TT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACGT-ACATCG---GAT---------CTTGCAT----TTTC--CAAC--TA--CCAAACACCCATCCGTAAGG----ATCGCTCGACT----AACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-T-CA-CTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTATGTGCATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162657 : AC----TTGGACCT--A--CATTCTAC-TGCTGAC-TTGT--GGAGATATTCACCCA-AACCCAGGTCCTATAAGC-T-CAACT-GC-A-ACCAACAACTC-A-------GTT-------TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-G-------------GAAGCCTTGGACTTT-TAACATCA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTATTAGATA---T-T--AATT-A---GATACA--------------AT--T----------TACTTTGA---ACTATA-T--GGA-TTC-GATATATTAGCTTTCTATGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCG-TT--CCATAAACCAATAAGAAAAG----ATCGC---GTT-GGAGATAGCCACGGTGGTGTTATTATGTAC-ATTAAA-GATACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-AG-AAATCAATCGTC-TG--GAATGCAT----ATGGGTTGAACTTACTATTAAACACAGACATATACT
gi|162658 : AC----TTGG--CT--ATCGGTCATA--T--TGTTGTTATCAGGAGATGTACACCCA-AACCCAGGCCC------CATTGAACTACTTATATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCCACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA---A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAG----ATCGC---ATT-GGAGACAACCACGGAGGGGTCATGTTATTC-ATTAAA-GACACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162659 : AC----TTGG--CT--ATCAGTCATA--T--TGTTGTTATCAGGAGATGTGCACCCA-AACCCAGGCCC------CATTGAACTACTTACATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCTACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA---A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAG----ATCGC---ATT-GGAGACTACCACGGAGGGGTCATGTTATTC-ATTAAA-GACACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162660 : TTTAC-TGTTGTT-TTG--CGGAGATATTCATCCA-AATCCAGGTCC----AGG-TTC---T-GT-ATAAC--CAACTCCAACAAACAGTTC--AT--TC-T---CA-T---TTTCTTCAACTTTTT-----------CAGATA-GTTTAGAAGCATT---A--GA---CTT--GTCACATAAT--TAATCTC--TC----GTTCACTATAATGTTCAGAG--TA---TCAAAT-C-TAA---ACTGGATACAC--------T-----T--TG---------TAC--CGA---ATTATA-T--GGG-TTT-GATATTCTAACTTTCTCTGAAACTTGGC-T---T--A-AC----GACTCTGTT-ATGTCA---GCTGAA------CTAAACT----TT----CAATCGTT--TCATA-ACC---CCGAAAGAAAATATCGC---ATT-GGAGATAGTCATGGAGGTGTTATTATGTATAAACAAGAAATACT--T-CA--TATTTTT----CGTAG-ACAAGA-CCT-CGAAA-TCAATCG---TTTAGAATGTAT----TTGGGTGGAAATATCAATTAAACACAAACACATACTAT
gi|162661 : --TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-GG--AAGCCT-T--GGA--CTT----TTC-ACAT--CA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT---------------A---A---GATATAAATTAGATACA---AT--T----------TACTCTGA---ACTATA-T--GGA-TTT-GATATATTAGCTTTCTCTGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCA-TT--CCATAAACCAATAAGAAAAG----ATCGC---GTT-GGAGATAGCCATGGTGGTGTTATTATGTAC-ATTAAA-GATACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-TG-AAATCAATCGTC-TG--GAATGCAT----ATGGATTGAACTTACTATTAAACACAGACATATACT
gi|162662 : ---CA-TCCATTTCATC-----TTCTTCGTTCCTATCAGATA-GTTT-GG--AAGCCT-A--TGA--CTT--GTCACATA-----A-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT-------------CAA---A---TATAAAT--------TAGATACAATC---------TACTCTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGCT-GCGTCAGCTGAT---------CTAGAAT----TT----CAAT--CATTCCCTCAACCAATAAGAAATG----ATCGC---ATTCGA-GATAGCCACGTTGGTGTCATTATAAAT-ATTAAA-GAGACAATT-TATTTTCTCGT------AAA-A-ATGA-CTTAAA-AA-TCAATCGTC-TT--GAATGCGT----TTTGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162663 : A-TCTT--TCTCTTATTCATTATAATGTTCCAAG--TA---TCAAAT-A-CAAATTA---GATACA----------A-------TC---------TACACTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTTCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAG----ATCGC---ATTGGG-GATAGCCACGGTGGTGTTATTATGTAT-ATTAAG-GAGACAATT-CA-TTTTTC-T----CGTAG-ACATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----ATGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162664 : A-TCTT--TCTCTTGTGCATTATAATGTTCAAAG--TA---TCAAAT-A-CAAATTA---GATACA----------A-------TC---------TACTCTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAG----ATCGC---ATTGGG-GATAGTCACGGTGGTGTTATTATGTAT-ATTAAA-GAGACAATT-CA-TTTTTC-T----CGTAG-AAATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----GTGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162665 : --TCAATAGTTCACTACATTGTCCAGAGTTTT---CG---G-C-CAA---A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTACCATTTCGTAAAG----ACAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATAC-G-TAAGCGATA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
gi|162666 : --TCAATAGTTCACTACAATGTCCAGAG-TTT---TC---TGC-CAA---A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTATT-TAAC---TTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAG----ACAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATAC-G-TAAGCGATA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
Alignments
lowQualScore : 1111 111 11 1111 11 11 11111 1111111 111111 111 2222222222222222222 111 3333333333333333 111 33333333333333333333333333333 1111 444444444 222222 2222222222222222 111111111 11 44444444444 111111 222222 1
lowQualScore : 7777 0 1 6 1 4 4 1 66 8 8 2 1 1 2 777 33 5555 55 00 0 2 6 99 44 0 2 3 1 44444 6 999 6 44 0 3333333 333333 2 111 6 33 0 0000000000000000000 44 9 111 0 0 6666 666 888 6 1 555 2 22 99 2222222222222222 44 000 2 00000000000000000000000000000 55 4444 111111111 4 1 1 0 4 444444 6 8888 44444 1 7777777777777777 444444444 8888 11 77 1 3 66 55 1 1 4444 11111111111 1 0 3 1 1 1 0 44 8 2 999999 22 1 3 666666 0 6 1 4 55 4 6 1 2 0 22 4444 1 1 1 1 222 1 1 1
lowQualScore : .... . . . . . . . .. . . . . . . ... .. .... .. .. . . . .. .. . . . . ..... . ... . .. . ....... ...... . ... . .. . ................... .. . ... . . .... ... ... . . ... . .. .. ................ .. ... . ............................. .. .... ......... . . . . . ...... . .... ..... . ................ ......... .... .. .. . . .. .. . . .... ........... . . . . . . . .. . . ...... .. . . ...... . . . . .. . . . . . .. .... . . . . ... . . .
lowQualScore : 0000 8 0 0 2 4 4 1 11 9 9 9 1 9 5 555 88 5555 00 00 2 1 7 22 55 4 3 3 0 44444 7 777 7 66 7 0000000 999999 0 777 7 99 8 0000000000000000000 55 2 555 2 8 4444 555 888 2 2 888 5 88 44 8888888888888888 88 555 4 77777777777777777777777777777 00 3333 000000000 0 0 0 6 0 999999 0 9999 88888 5 5555555555555555 777777777 1111 33 11 0 1 88 11 0 5 5555 44444444444 0 1 3 1 7 0 1 88 4 1 111111 33 0 0 222222 6 3 0 2 11 2 3 0 0 3 99 5555 0 1 0 0 444 0 0 0
consensus : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
Reference ( family-790 ) : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
gi|162647 : TATTTCTGCTATTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTTTTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCC-GC--TCGT---CA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGGA----TCGCCCGACT----GACAGATACGGCGCTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162648 : TATTTCC----TTTCTACTCGTATGATCACATGTTCCACTGAGGATACTCGCTCACACAGACTAATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---TTTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---TA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTA-GATGTATTGGCGTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGCAAGGA----TCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162649 : TATTTCC----TCTCTTCTCGTATGATCACATGTCCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTAACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTATCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GAAACAC--------CA---AC--TG---------TAATCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACTCTTCCGTAAGGA----TCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-TTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGCTAGAATTGAAAGTGAAACATAAACCTATTTTGTT
gi|162650 : TATTTCC----TTTCATCTCGTATGATCACATGTTCCACGGAGGTTATTCGCTT---C-GACTTATCACCCTGGTATTACATAATGTGTATTGATATATCTGTATACAGAGCGAGAGTGGGT-CT-CTTTGGTCAC--TAT-AA-ACTCAATCAAAAAGGGTTTAAACCGATTAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATACGGTTTAC-T--TATT-CTGTCCAGTGACGTCCACGAA-AATCCAGGTCC----AGC-TTCATCAAGT-ACTTC--CGAATTGA-------GTTCCGGC--TCGT---CA-TCCACTTTGTC-----TTC-----------CGGATC-ATTT-GA--CCTCGC-A--GAA--CTT--ATTTC-TAGC--CT-TCTG--TTATTTGTTCATCATAATGTCCAAAGCTTT---GC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TATACTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGTACACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CATC--TA--CCAAACACCCTTT-GTAAGGA----TCGCCCGATT----GACAGATATTGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CAGCTC-C----CGAAG-GCAAGA-CTA-AG-AG-GTAAACGACATT--GAATGTAT----ATTGTTAGAATTGAAAGTGAATCATAAACCTATTCTGTT
gi|162651 : TACTTCT----TTTCTTCTCGCATGATCACATGTCCCTCGGAGGATACTCGCTCACTCTGACTTATCGCCCTAGTATTACATAATGTGTATAGATACATCTGCTCACAGAGCGAGAGTTGGT-CT-GTTTGGTCAC--TAT-CA-ACT----CAAAAAGGTCTTAAACCGATGAACAGTTTTG---ATTT--GATTAT----TTGG--CT--TTCCATTTTAC-T--TATA-CTGTCCGGTGACGTCCACAAACAATCCTGGTCC----AGC-TTGATGTAGT-ACATC--CGATTTGA-------G-----------------A-T-----------------C-----------CGGATG-AGTT-GG--CTTTTC-G--GAA--CTT--ATTGC-TAGC--AA-TCTCTTTTATTTGTTCATTATAATGTCAAAAGATTT---GC---C-A-CAA--C---AATACAC--------CA---AC--TG---------TATGCTGA---TTTGTGCT--CA--TTT-GATGTATTGGCTTTCGCGGAAACCTGGT-TAAAT--A-AC----AACAGATCT-ACATCA---TAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGGA----TCGCCCGACT----GACAGATATGGCGGTGTTCTAGTCTATGT-AAAA-GA-TACGA-T-CA-CTGCTCGC----CGAAA-GCATGT-CTT-AG-AG-TCAAACGACATT--GAATGTAT----ATGCTTTGAATTGAAAGTGAAGCATAAAACTATTTTGTT
gi|162652 : TTATGACTTTGGAATTACATAATGTGTGTTGATTTAAATATGTACAGGGCGAGAATAGG
gi|162652 : --TCAATAGTTCACTACAATGTTCAGAG-TTT---TC---TGC-CAA--A---GAAAGAA--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAGA----CAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAAaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgtcaatagttcactacaatgttcagagttttctgccaaagaaagaattactctatgcagaattattcaactttgatatattagcatttaccgagacctggttaacagacaatgtgtcaaacgatgatatattctttgacaattatttagtcccatttcgtaaagacagaccattagacgctcatggtggtattattgtatacgtaagcgataaattacacgcaataagaagaactgaacttgaacccaataatatcgaatgcttatggatagaa
gi|162653 : ttatgactttggaattacataatgtgtgttgatttaaatatgtacagggcgagaataggaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgCTGGAATAATATAATGTCTACTGACATAATTGTTTATAGAATCCGAATAGGT-TT-GTTTGGTC-CTGTAT-CT-TCTTAAGCAAAAGG
gi|162653 : --TCAATTGTTCAATATAATGTTCAAAGTTTT---AT---T-CACAAG-A---AAGACAT--------T-----C--TG---------TACGCAGAACTTTTACA-----A--TTT-GATATATTAGTATTTACAGAGACTTGGC-T-AAT--A-tacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattatcaattgttcaatataatgttcaaagttttattcacaagaaagacattctgtacgcagaacttttacaatttgatatattagtatttacagagacttggctaata
gi|162654 : ctggaataatataatgtctactgacataattgtttatagaatccgaataggtttgtttggtcctgtatcttcttaagcaaaaggtacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattaTGGTATAACATAATAGCTATAGATATTTCTGTATATAGGGTGAGGATAGGTAAA-TTTTG--CAT--TATACAGGCTAAATC-CAAAGGCTTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATT--TGAT
gi|162654 : ATATATTT-GA----TCTC-ACTAAA--CA---AT--C-TAAC---A-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATGA-----CAGAC-GTT-TT-GATGCTCATGGGGGAATTCTTGTATATAT-AAAT-AA-CA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATCATTTTGTTctcactaaacaatctaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgatgctcatgggggaattcttgtatatataaataacagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaatcattttgtt
gi|162655 : tggtataacataatagctatagatatttctgtatatagggtgaggataggtaaattttgcattatacaggctaaatccaaaggctttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaTGGTATAACATAATGGCTATAGATATTTCTGTATATAGGGTGAGGATAGGT-ATATTTTG--CAT--TATACAGGCTAAATC-CAAAGGCCTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATC--TGAT
gi|162655 : --CA-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATGA-----CAGAC-GTT-TT-GACGCTCATGGGGGAATTCTTAAATATA--TAAGTAA-TA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATAATTTTGTTctcactaaacaatccaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgacgctcatgggggaattcttaaatatataagtaatagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaataattttgtt
gi|162656 : tggtataacataatggctatagatatttctgtatatagggtgaggataggtatattttgcattatacaggctaaatccaaaggccttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatatatctgatctcactaaacaatccaaTATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-AATCAAGCAAAAAGGGTTTAAACCGATGAACAATTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACATCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACATC--AGATTTGA-------GTTCCGGC--TCTT---CA-TCCATTTTGTT-----TTC-----------CGGATC-ATTT-GA--CATTTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAGGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TG------------------------TT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACGT-ACATCG---GAT---------CTTGCAT----TTTC--CAAC--TA--CCAAACACCCATCCGTAAGGA----TCGCTCGACT----AACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTATGTGCATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162657 : AC----TTGGACCT--A--CATTCTAC-TGCTGAC-TTGT--GGAGATATTCACCCA-AACCCAGGTCCTATAAGC-T-CAACT-GC-A-ACCAACAACTC-A-------GTT-------TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-G-------------GAAGCCTTGGACTTT-TAACATCA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTATTAGATA---T-T--AATTA---GATACA--------------AT--T----------TACTTTGA---ACTATA-T--GGA-TTC-GATATATTAGCTTTCTATGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCG-TT--CCATAAACCAATAAGAAAAGA----TCGC---GTT-GGAGATAGCCACGGTGGTGTTATTATGTACAT-TAAA-GA-TACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-AG-AAATCAATCGTC-TG--GAATGCAT----ATGGGTTGAACTTACTATTAAACACAGACATATACT
gi|162658 : AC----TTGG--CT--ATCGGTCATA--T--TGTTGTTATCAGGAGATGTACACCCA-AACCCAGGCCC------CATTGAACTACTTATATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCCACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAGA----TCGC---ATT-GGAGACAACCACGGAGGGGTCATGTTATTCAT-TAAA-GA-CACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162659 : AC----TTGG--CT--ATCAGTCATA--T--TGTTGTTATCAGGAGATGTGCACCCA-AACCCAGGCCC------CATTGAACTACTTACATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCTACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAGA----TCGC---ATT-GGAGACTACCACGGAGGGGTCATGTTATTCAT-TAAA-GA-CACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162660 : TTTAC-TGTTGTT-TTG--CGGAGATATTCATCCA-AATCCAGGTCC----AGG-TTC---T-GT-ATAAC--CAACTCCAACAAACAGTTC--AT--TC-T---CA-T---TTTCTTCAACTTTTT-----------CAGATA-GTTTAGAAGCATT---A--GA---CTT--GTCACATAAT--TAATCTC--TC----GTTCACTATAATGTTCAGAG--TA---TCAAAT-C-TAA--ACTGGATACAC--------T-----T--TG---------TAC--CGA---ATTATA-T--GGG-TTT-GATATTCTAACTTTCTCTGAAACTTGGC-T---T--A-AC----GACTCTGTT-ATGTCA---GCTGAA------CTAAACT----TT----CAATCGTT--TCATA-ACCC---CGAAAGAAAATATCGC---ATT-GGAGATAGTCATGGAGGTGTTATTATGTATAAACAAG-AAATACT--T-CA--TATTTTT----CGTAG-ACAAGA-CCT-CG-AAATCAATCG---TTTAGAATGTAT----TTGGGTGGAAATATCAATTAAACACAAACACATACTAT
gi|162661 : --TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-GG--AAGCCT-T--GGA--CTT----TTC-ACAT--CA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT---------------A--A---GATATAAATTAGATACA---AT--T----------TACTCTGA---ACTATA-T--GGA-TTT-GATATATTAGCTTTCTCTGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCA-TT--CCATAAACCAATAAGAAAAGA----TCGC---GTT-GGAGATAGCCATGGTGGTGTTATTATGTACAT-TAAA-GA-TACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-TG-AAATCAATCGTC-TG--GAATGCAT----ATGGATTGAACTTACTATTAAACACAGACATATACT
gi|162662 : ---CA-TCCATTTCATC-----TTCTTCGTTCCTATCAGATA-GTTT-GG--AAGCCT-A--TGA--CTT--GTCACATA-----A-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT-------------CAA--A---TATAAAT--------TAGATACAATC---------TACTCTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGCT-GCGTCAGCTGAT---------CTAGAAT----TT----CAAT--CATTCCCTCAACCAATAAGAAATGA----TCG--C-ATTCGA-GATAGCCACGTTGGTGTCATTATAAATAT-TAAA-GA-GACAATT-TATTTTCTCGT------AAA-A-ATGA-CTTAAA-AA-TCAATCGTC-TT--GAATGCGT----TTTGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162663 : A-TCTT--TCTCTTATTCATTATAATGTTCCAAG--TA---TCAAAT-A-CAA--ATTAGATACA--------------A---TC---------TACACTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTTCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAGA----TCG--C-ATTGGG-GATAGCCACGGTGGTGTTATTATGTATAT-TAAG-GA-GACAATT-CA-TTTTTC-T----CGTAG-ACATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----ATGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162664 : A-TCTT--TCTCTTGTGCATTATAATGTTCAAAG--TA---TCAAAT-A-CAA--ATTAGATACA--------------A---TC---------TACTCTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAGA----TCG--C-ATTGGG-GATAGTCACGGTGGTGTTATTATGTATAT-TAAA-GA-GACAATT-CA-TTTTTC-T----CGTAG-AAATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----GTGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162665 : --TCAATAGTTCACTACATTGTCCAGAGTTTT---CG---G-C-CAA--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTACCATTTCGTAAAGA----CAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
gi|162666 : --TCAATAGTTCACTACAATGTCCAGAG-TTT---TC---TGC-CAA--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTATT-TAAC---TTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAGA----CAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
Alignments
lowQualScore : 1111 111 11 1111 11 11 11111 1111111 111111 111 2222222222222222222 111 3333333333333333 111 33333333333333333333333333333 1111 444444444 222222 2222222222222222 111111111 11 44444444444 111111 222222 1
lowQualScore : 7777 0 1 6 1 4 4 1 66 8 8 2 1 1 2 777 33 5555 55 00 0 2 6 99 44 0 2 3 1 44444 6 999 6 44 0 3333333 333333 2 111 6 33 0 0000000000000000000 44 9 111 0 0 6666 666 888 6 1 555 2 22 99 2222222222222222 44 000 2 00000000000000000000000000000 55 4444 111111111 4 1 1 0 4 444444 6 8888 44444 1 7777777777777777 444444444 8888 11 77 1 3 66 55 1 1 4444 11111111111 1 0 3 1 1 1 0 44 8 2 999999 22 1 3 666666 0 6 1 4 55 4 6 1 2 0 22 4444 1 1 1 1 222 1 1 1
lowQualScore : .... . . . . . . . .. . . . . . . ... .. .... .. .. . . . .. .. . . . . ..... . ... . .. . ....... ...... . ... . .. . ................... .. . ... . . .... ... ... . . ... . .. .. ................ .. ... . ............................. .. .... ......... . . . . . ...... . .... ..... . ................ ......... .... .. .. . . .. .. . . .... ........... . . . . . . . .. . . ...... .. . . ...... . . . . .. . . . . . .. .... . . . . ... . . .
lowQualScore : 0000 8 0 0 2 4 4 1 11 9 9 9 1 9 5 555 88 5555 00 00 2 1 7 22 55 4 3 3 0 44444 7 777 7 66 7 0000000 999999 0 777 7 99 8 0000000000000000000 55 2 555 2 8 4444 555 888 2 2 888 5 88 44 8888888888888888 88 555 4 77777777777777777777777777777 00 3333 000000000 0 0 0 6 0 999999 0 9999 88888 5 5555555555555555 777777777 1111 33 11 0 1 88 11 0 5 5555 44444444444 0 1 3 1 7 0 1 88 4 1 111111 33 0 0 222222 6 3 0 2 11 2 3 0 0 3 99 5555 0 1 0 0 444 0 0 0
consensus : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
Reference ( family-790 ) : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
gi|162647 : TATTTCTGCTATTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTTTTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCC-GC--TCGT---CA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGGA----TCGCCCGACT----GACAGATACGGCGCTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162648 : TATTTCC----TTTCTACTCGTATGATCACATGTTCCACTGAGGATACTCGCTCACACAGACTAATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---TTTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---TA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTA-GATGTATTGGCGTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGCAAGGA----TCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162649 : TATTTCC----TCTCTTCTCGTATGATCACATGTCCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTAACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTATCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GAAACAC--------CA---AC--TG---------TAATCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACTCTTCCGTAAGGA----TCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-TTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTAT----ATGGCTAGAATTGAAAGTGAAACATAAACCTATTTTGTT
gi|162650 : TATTTCC----TTTCATCTCGTATGATCACATGTTCCACGGAGGTTATTCGCTT---C-GACTTATCACCCTGGTATTACATAATGTGTATTGATATATCTGTATACAGAGCGAGAGTGGGT-CT-CTTTGGTCAC--TAT-AA-ACTCAATCAAAAAGGGTTTAAACCGATTAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATACGGTTTAC-T--TATT-CTGTCCAGTGACGTCCACGAA-AATCCAGGTCC----AGC-TTCATCAAGT-ACTTC--CGAATTGA-------GTTCCGGC--TCGT---CA-TCCACTTTGTC-----TTC-----------CGGATC-ATTT-GA--CCTCGC-A--GAA--CTT--ATTTC-TAGC--CT-TCTG--TTATTTGTTCATCATAATGTCCAAAGCTTT---GC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TATACTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGTACACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CATC--TA--CCAAACACCCTTT-GTAAGGA----TCGCCCGATT----GACAGATATTGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CAGCTC-C----CGAAG-GCAAGA-CTA-AG-AG-GTAAACGACATT--GAATGTAT----ATTGTTAGAATTGAAAGTGAATCATAAACCTATTCTGTT
gi|162651 : TACTTCT----TTTCTTCTCGCATGATCACATGTCCCTCGGAGGATACTCGCTCACTCTGACTTATCGCCCTAGTATTACATAATGTGTATAGATACATCTGCTCACAGAGCGAGAGTTGGT-CT-GTTTGGTCAC--TAT-CA-ACT----CAAAAAGGTCTTAAACCGATGAACAGTTTTG---ATTT--GATTAT----TTGG--CT--TTCCATTTTAC-T--TATA-CTGTCCGGTGACGTCCACAAACAATCCTGGTCC----AGC-TTGATGTAGT-ACATC--CGATTTGA-------G-----------------A-T-----------------C-----------CGGATG-AGTT-GG--CTTTTC-G--GAA--CTT--ATTGC-TAGC--AA-TCTCTTTTATTTGTTCATTATAATGTCAAAAGATTT---GC---C-A-CAA--C---AATACAC--------CA---AC--TG---------TATGCTGA---TTTGTGCT--CA--TTT-GATGTATTGGCTTTCGCGGAAACCTGGT-TAAAT--A-AC----AACAGATCT-ACATCA---TAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGGA----TCGCCCGACT----GACAGATATGGCGGTGTTCTAGTCTATGT-AAAA-GA-TACGA-T-CA-CTGCTCGC----CGAAA-GCATGT-CTT-AG-AG-TCAAACGACATT--GAATGTAT----ATGCTTTGAATTGAAAGTGAAGCATAAAACTATTTTGTT
gi|162652 : TTATGACTTTGGAATTACATAATGTGTGTTGATTTAAATATGTACAGGGCGAGAATAGG
gi|162652 : --TCAATAGTTCACTACAATGTTCAGAG-TTT---TC---TGC-CAA--A---GAAAGAA--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAGA----CAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAAaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgtcaatagttcactacaatgttcagagttttctgccaaagaaagaattactctatgcagaattattcaactttgatatattagcatttaccgagacctggttaacagacaatgtgtcaaacgatgatatattctttgacaattatttagtcccatttcgtaaagacagaccattagacgctcatggtggtattattgtatacgtaagcgataaattacacgcaataagaagaactgaacttgaacccaataatatcgaatgcttatggatagaa
gi|162653 : ttatgactttggaattacataatgtgtgttgatttaaatatgtacagggcgagaataggaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgCTGGAATAATATAATGTCTACTGACATAATTGTTTATAGAATCCGAATAGGT-TT-GTTTGGTC-CTGTAT-CT-TCTTAAGCAAAAGG
gi|162653 : --TCAATTGTTCAATATAATGTTCAAAGTTTT---AT---T-CACAAG-A---AAGACAT--------T-----C--TG---------TACGCAGAACTTTTACA-----A--TTT-GATATATTAGTATTTACAGAGACTTGGC-T-AAT--A-tacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattatcaattgttcaatataatgttcaaagttttattcacaagaaagacattctgtacgcagaacttttacaatttgatatattagtatttacagagacttggctaata
gi|162654 : ctggaataatataatgtctactgacataattgtttatagaatccgaataggtttgtttggtcctgtatcttcttaagcaaaaggtacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattaTGGTATAACATAATAGCTATAGATATTTCTGTATATAGGGTGAGGATAGGTAAA-TTTTG--CAT--TATACAGGCTAAATC-CAAAGGCTTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATT--TGAT
gi|162654 : ATATATTT-GA----TCTC-ACTAAA--CA---AT--C-TAAC---A-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATGA-----CAGAC-GTT-TT-GATGCTCATGGGGGAATTCTTGTATATAT-AAAT-AA-CA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATCATTTTGTTctcactaaacaatctaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgatgctcatgggggaattcttgtatatataaataacagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaatcattttgtt
gi|162655 : tggtataacataatagctatagatatttctgtatatagggtgaggataggtaaattttgcattatacaggctaaatccaaaggctttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaTGGTATAACATAATGGCTATAGATATTTCTGTATATAGGGTGAGGATAGGT-ATATTTTG--CAT--TATACAGGCTAAATC-CAAAGGCCTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATC--TGAT
gi|162655 : --CA-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA--A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATGA-----CAGAC-GTT-TT-GACGCTCATGGGGGAATTCTTAAATATA--TAAGTAA-TA-G-----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AG-ATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATAATTTTGTTctcactaaacaatccaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgacgctcatgggggaattcttaaatatataagtaatagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaataattttgtt
gi|162656 : tggtataacataatggctatagatatttctgtatatagggtgaggataggtatattttgcattatacaggctaaatccaaaggccttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatatatctgatctcactaaacaatccaaTATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-AATCAAGCAAAAAGGGTTTAAACCGATGAACAATTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACATCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACATC--AGATTTGA-------GTTCCGGC--TCTT---CA-TCCATTTTGTT-----TTC-----------CGGATC-ATTT-GA--CATTTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAGGCTTT---GC---C-C-CAA--A---GATACAC--------CA---AC--TG---------TG------------------------TT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACGT-ACATCG---GAT---------CTTGCAT----TTTC--CAAC--TA--CCAAACACCCATCCGTAAGGA----TCGCTCGACT----AACAGATATGGCGGTGTCCTAGTCTATGT-TAAG-GA-TACGA-T-CA-CTGCTCGC----CGAAG-ACAAGA-CTT-AG-AG-TTAAACGACATT--GAATGTATGTGCATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162657 : AC----TTGGACCT--A--CATTCTAC-TGCTGAC-TTGT--GGAGATATTCACCCA-AACCCAGGTCCTATAAGC-T-CAACT-GC-A-ACCAACAACTC-A-------GTT-------TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-G-------------GAAGCCTTGGACTTT-TAACATCA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTATTAGATA---T-T--AATTA---GATACA--------------AT--T----------TACTTTGA---ACTATA-T--GGA-TTC-GATATATTAGCTTTCTATGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCG-TT--CCATAAACCAATAAGAAAAGA----TCGC---GTT-GGAGATAGCCACGGTGGTGTTATTATGTACAT-TAAA-GA-TACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-AG-AAATCAATCGTC-TG--GAATGCAT----ATGGGTTGAACTTACTATTAAACACAGACATATACT
gi|162658 : AC----TTGG--CT--ATCGGTCATA--T--TGTTGTTATCAGGAGATGTACACCCA-AACCCAGGCCC------CATTGAACTACTTATATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCCACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAGA----TCGC---ATT-GGAGACAACCACGGAGGGGTCATGTTATTCAT-TAAA-GA-CACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162659 : AC----TTGG--CT--ATCAGTCATA--T--TGTTGTTATCAGGAGATGTGCACCCA-AACCCAGGCCC------CATTGAACTACTTACATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCTACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA--A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAGA----TCGC---ATT-GGAGACTACCACGGAGGGGTCATGTTATTCAT-TAAA-GA-CACAA-TACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AA-TCAACCCAC-TT--GAATGTAT----ATGG
gi|162660 : TTTAC-TGTTGTT-TTG--CGGAGATATTCATCCA-AATCCAGGTCC----AGG-TTC---T-GT-ATAAC--CAACTCCAACAAACAGTTC--AT--TC-T---CA-T---TTTCTTCAACTTTTT-----------CAGATA-GTTTAGAAGCATT---A--GA---CTT--GTCACATAAT--TAATCTC--TC----GTTCACTATAATGTTCAGAG--TA---TCAAAT-C-TAA--ACTGGATACAC--------T-----T--TG---------TAC--CGA---ATTATA-T--GGG-TTT-GATATTCTAACTTTCTCTGAAACTTGGC-T---T--A-AC----GACTCTGTT-ATGTCA---GCTGAA------CTAAACT----TT----CAATCGTT--TCATA-ACCC---CGAAAGAAAATATCGC---ATT-GGAGATAGTCATGGAGGTGTTATTATGTATAAACAAG-AAATACT--T-CA--TATTTTT----CGTAG-ACAAGA-CCT-CG-AAATCAATCG---TTTAGAATGTAT----TTGGGTGGAAATATCAATTAAACACAAACACATACTAT
gi|162661 : --TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-GG--AAGCCT-T--GGA--CTT----TTC-ACAT--CA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT---------------A--A---GATATAAATTAGATACA---AT--T----------TACTCTGA---ACTATA-T--GGA-TTT-GATATATTAGCTTTCTCTGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCA-TT--CCATAAACCAATAAGAAAAGA----TCGC---GTT-GGAGATAGCCATGGTGGTGTTATTATGTACAT-TAAA-GA-TACAA-TTCA-TTTTTC-T----CGTAG-AAATGA-CTT-TG-AAATCAATCGTC-TG--GAATGCAT----ATGGATTGAACTTACTATTAAACACAGACATATACT
gi|162662 : ---CA-TCCATTTCATC-----TTCTTCGTTCCTATCAGATA-GTTT-GG--AAGCCT-A--TGA--CTT--GTCACATA-----A-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT-------------CAA--A---TATAAAT--------TAGATACAATC---------TACTCTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGCT-GCGTCAGCTGAT---------CTAGAAT----TT----CAAT--CATTCCCTCAACCAATAAGAAATGA----TCG--C-ATTCGA-GATAGCCACGTTGGTGTCATTATAAATAT-TAAA-GA-GACAATT-TATTTTCTCGT------AAA-A-ATGA-CTTAAA-AA-TCAATCGTC-TT--GAATGCGT----TTTGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162663 : A-TCTT--TCTCTTATTCATTATAATGTTCCAAG--TA---TCAAAT-A-CAA--ATTAGATACA--------------A---TC---------TACACTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTTCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAGA----TCG--C-ATTGGG-GATAGCCACGGTGGTGTTATTATGTATAT-TAAG-GA-GACAATT-CA-TTTTTC-T----CGTAG-ACATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----ATGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162664 : A-TCTT--TCTCTTGTGCATTATAATGTTCAAAG--TA---TCAAAT-A-CAA--ATTAGATACA--------------A---TC---------TACTCTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAGA----TCG--C-ATTGGG-GATAGTCACGGTGGTGTTATTATGTATAT-TAAA-GA-GACAATT-CA-TTTTTC-T----CGTAG-AAATGA-CTT-AGAAA-TCAATCGTC-TA--GAATGCGT----GTGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162665 : --TCAATAGTTCACTACATTGTCCAGAGTTTT---CG---G-C-CAA--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTACCATTTCGTAAAGA----CAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
gi|162666 : --TCAATAGTTCACTACAATGTCCAGAG-TTT---TC---TGC-CAA--A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTATT-TAAC---TTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAGA----CAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATACG--TAAGCGA-TA--A----A-TTACACGCAATAAGAAGAACTGAA-CTT--G-AA-CCCAATAATATC--GAATGCTT----ATGGATAGAA
blockSeqs : . A A T A A G TG A G C G A C CTT TG ACAC AC TA T T GC GT G C C TATAA A CGT T AA ACAAACA TGTCAG G ACT A AT TTCTTCGTTCCTAT AT C AGC ACT AGC GGA A G ATC A TT AT TATTAGATATT TT CTG T CAAATTGGATATCATC TG ACTT GCTCA T G G T AGTCC G TACT AAATG T TGATGATATGATG GATCTAGAA CGA CG TT A C CT CC C G AATA GACGTTTT A C C A C AA C A CAATT TT G T GCAATA A A T AA A A A A A TA GTGC T A T G AAG G C T
blockSeqs : . A A T . . G . A G C G A C CTT TG ACAC . TA T T GT GT G . C A A CAT T . . TGTCAG G ACT A AT AACTTTTT C C C TA A A A G C . . AT TTTTATTCA G TTA A CAAATTGGATATCATC AT ACT GCTCA T T G T AGTCC G TACT AAATG T TGATGATATGATG GATCTAGAA CGA G A A C CT CC T G . GACGTTTT A C C A C T T . CAATA C G T GCGATA A A T A A A A A A . . C A T G AAG G C T
blockSeqs : . T T A . . G . . . C T A C . . . . . G . . A G . A A . CAT . . . CGGC G . . AC CTTTT C A C TA A A . G C . . AT TATCAAATC . TTA T AATTAGATACAATT TA ACT GCTCA . T G . GAAT G . ACCT T AGCTGAA TGCCT TC A A A C CT CC T G . CCCGACT A C C A C T C . CAATA T G T GCGATA A A . A . A A A A . . T A T G AAG G C T
blockSeqs : . . . T . . G . . . T G A C . . . . . T . . C A . T A . GAT . . . CGGC T . . AT CTTTT C . C A A A . G C . . AT TATCAAATA . . T TTAGATACAATC TG ACT GCTCA . T G . GAAT . . ACCT T AGCTGAT TGCCT TC A . A C CT TC T G . CCCGACT A C C A C T C . CAATT C G T GCAATA . T . A . . A A A . . T T T G AAG G C T
blockSeqs : G . . G . . . A T A C . . . . . T . . C A . T A . CAT . . . CGGC A . . AC TTC G . C A A A . A A . . AA TATCAAATA . . A CCAACTG TG T TCAAC . A C . GAAT . . ACCT T AGCTGAT TGCCT TC A . A T AT TC T A . CCCGATT T T A T A T . . CAATT C A A GCAATA . G . A . . A A A . . A A A T GCC A T T
blockSeqs : T . . G . . . A T A . . . . . . T . . C A . T A . CAA . . . CGGC G . . AC TTC C . C A A A . G C . . AA CTTTGCCC . . G CCAACTG CG T AACAC . A A . AAAT . . ATCT T AGCTGAT TGCCT TC . . T T GT TC T T . CCCGACT T G C T A T . . CAATT T A A GC . T . A . . C G A . . T A A T GCC A T T
blockSeqs : A . . . . . . C G . . . . . . . T . . C G . C A . GAA . . . AT G . . AT TTC A . A G A A . A C . . AT CTTTTCTC . . A CCAACTG TG T AACAC . A A . GAAT . . ACGT T GATGAT ATTCT GA . . T T GT CC T T . ACCATTA T G C T A T . . CAATT C A A GC . T . A . . C G A . . T A T G AAG G C T
blockSeqs : A . . . . . . . . . . . . T . . T C . A . . GAA . . . . A . . T TTC A . A A A G . A A . . TC CTTTGCTC . . A CCAACTG TG T ATGGA . A A . AAC . . TATT T GATGAT TGCAT TC . . A C CA AA T G . CTCGACT A C C A C T . . CGAT C G T GC . A . A . . A A A . . T A C T CTA T A A
blockSeqs : T . . . . . . T C . A . . C . . . . . . . . TCA A . . A A G . A A . . GT ATTTGCCA . . T ATTACTC CT A ATGGG . T G . AAT . . TGTT A GATGAT TCCTT CC . . T A AA AA A A . CGTTGGA C T A T G T . . CGAT C T T GC . T . A . . T T A . . G T A A CAA T A A
blockSeqs : . . . . . . . C . A . . . . . . . . . TCA A . . T . . . A T . . GT TTTTCTGC . . T CATACTC CT T ATGGA . T T . AAC . . TGTT A GGAT TCCTT TT . . G A AA AA A A . CATTGGA C A A G A T . . CGAT T A T AA . C . G . . C A A . . G G C T CTA T A A
blockSeqs : . . . C . A . . . . . . . . C A . . A . . . A C . . TC CTTTTTAC . . T CATACTC CT T TCAAC . T T . AAC . . TGTT T GGAT AAACT TT . . G A AA AA A A . CATTGGA C A A G A T . . CGAT C A T AA . C . G . . C A . . . A T A T CTA T A A
blockSeqs : A . . . . . . . . . . TC CTTTTTAC . . T CCAACTG CT A TTAAC . T T . T . . TATT T GGAT AGAAT CC . . T A AA AA A G . CATTGGA T A A T G T . . CGAT C A T TT . A . C . . T T . . . G T A T CTA T A A
blockSeqs : . . . TC CTTTGCCC . . T TTTACTC CT A ATGG . T T . C . . TGCT T ATAT ATTCT TC . . T A AA TC A A . CGTTGGA C T A T G T . . CTT T T T GT . T . T . . T T . . . G T A T CTA T A A
blockSeqs : . . TC TTTTCGGC . . T TTTACTC CA A ATGG . T T . C . . TGTT T GGAT ATTCT TC . . T A AT TC A T . CATTCGA C T A T A T . . A T T T C . T . A . . T T . . . G T
blockSeqs : . . AA TTTTCTGC . . T TTCTG CT A GGG . A C . T . . TGTT T AT AGAA GA . . T A AT T A A . CATTGGG C T A T G . . . G T T A T . T . A . . T T . . . A A
blockSeqs : . AA TAT . . A CTTTG TG A GGG . A C . T . . GTC . AT AGAA GA . . T T C C A A . CATTGGG T T A T G . . . G T T A T . T . . . . T A . . . A A
blockSeqs : . . TAT . . A ATT TG A GGG . A C . T . . GTC . AT A . . . A T . . T A . ACCATTA T T A T A . . . A T A . T . G . . . . A A . . .
blockSeqs : . . TA . . . ATC C A AA . A C . T . . GTC . AT A . . . A . . . T A . ACCATTA T T A T A . . . A . A . T . G . . . . A . . . .
blockSeqs : . . TA . . . ATC . . . . A C . T .
blockSeqCons : **** CGGC** AAT*** CGATT*
originalCons : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGA-T-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
finalCons : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA--A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-TAAT---A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGGA----TCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTACGT-TAAG-GA-TACGATT-CA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AG-TCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
Alignments
lowQualScore : 1111 111 11 1111 11 11 11111 1111111 111111 111 2222222222222222222 111 3333333333333333 33333333333333333333333333333 1111 444444444 222222 2222222222222222 111111111 11 44444444444 222222 1 1
lowQualScore : 7777 0 1 6 1 4 4 1 66 8 8 2 1 1 2 777 33 5555 55 00 0 2 6 99 44 0 2 3 1 44444 6 999 6 44 0 3333333 333333 2 111 6 33 0 0000000000000000000 44 9 111 0 0 6666 666 888 6 1 555 2 22 99 2222222222222222 888 777 2 00000000000000000000000000000 66 4444 111111111 4 1 1 0 4 444444 6 8888 44444 1 7777777777777777 444444444 8888 11 77 1 3 77 44 1 1 4444 11111111111 1 0 3 1 1 1 3333 44 0 88 22 1 3 666666 0 6 1 4 55 0 1 2 0 22 4444 1 1 1 1 222 1 1 1
lowQualScore : .... . . . . . . . .. . . . . . . ... .. .... .. .. . . . .. .. . . . . ..... . ... . .. . ....... ...... . ... . .. . ................... .. . ... . . .... ... ... . . ... . .. .. ................ ... ... . ............................. .. .... ......... . . . . . ...... . .... ..... . ................ ......... .... .. .. . . .. .. . . .... ........... . . . . . . .... .. . .. .. . . ...... . . . . .. . . . . .. .... . . . . ... . . .
lowQualScore : 0000 8 0 0 2 4 4 1 11 9 9 9 1 9 5 555 88 5555 00 00 2 1 7 22 55 4 3 3 0 44444 7 777 7 66 7 0000000 999999 0 777 7 99 8 0000000000000000000 55 2 555 2 8 4444 555 888 2 2 888 5 88 44 8888888888888888 222 000 4 66666666666666666666666666666 33 3333 000000000 0 0 0 6 0 999999 0 9999 88888 5 5555555555555555 777777777 1111 33 11 0 1 55 33 0 5 5555 44444444444 0 1 3 1 7 0 3333 33 9 22 33 0 0 222222 6 3 0 2 11 5 0 0 3 99 5555 0 1 0 0 444 0 0 0
consensus : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA---A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGG----ATCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTAC-GTTAAG-GATACGATTCA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AGTCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
Reference ( family-790 ) : TATTTCC----TTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACGTCCACGAA-AATCCNGGTCC----AGC-TTCATCTAGT-ACATC--CGATTCGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATA-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCANTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA---A---GATACAC--------CA---AC--TG---------TACGCTGA---TTTATG-T--CG--TTT-GATATATTAGCNTTCACNGAAACCTGGC-T-AAT--A-AC----GATACNNCT-ACATCG---GAT---------CTNGCCT----TTTC--CAAC--TA--CCANANACCNTTNCGNAAGG----ATCGCCC-ATT-GG-GACAGNCACGGCGGTGTCATTGTNTAC-GTTAAG-GATACGATTCA-CTNCTCGC----CGAAG-ACANGA-CTT-AG-AGTCAANCGACATT--GAATGCAT----ATGGNTAGAANTNANNGTNAAACACAAACNTATNCTGTT
gi|162647 : TATTTCTGCTATTTCTTCTCGTATGATCACATGTTCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTTTTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCC-GC--TCGT---CA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA---A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGG----ATCGCCCGACT----GACAGATACGGCGCTGTCCTAGTCTAT-GTTAAG-GATACGA-TCA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AGTTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162648 : TATTTCC----TTTCTACTCGTATGATCACATGTTCCACTGAGGATACTCGCTCACACAGACTAATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTTACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTCAAACCGATGAACAGTTTCG---TTTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-ATGTCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCGTCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---TA-TCCATTTTGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---GC---C-C-CAA---A---GATACAC--------CA---AC--TG---------TATGCTGA---TTTATGCT--CA--TTA-GATGTATTGGCGTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGCAAGG----ATCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-TCA-CCGCTCGC----CGAAG-ACAAGA-CTT-AG-AGTTAAACGACATT--GAATGTAT----ATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162649 : TATTTCC----TCTCTTCTCGTATGATCACATGTCCCACGGAGGATACTCGCTCACACAGACTTATCACCCTGGTATTACATAATGTCTATTGATATATCTGTTAACAGAGCGAGAGTGGGT-CT-TTTTGGTCAC--TAT-CA-ACTCAAGCAAAAAGGGTTTAAACCGATGAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTATCCGGTGACGTCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACGTC--CGATTTGA-------GTTCCGGC--TCGT---CA-TCCATTTCGTC-----TTC-----------CGGATC-ATTT-GA--CATCTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAAGCTTT---TC---T-C-CAA---A---GAAACAC--------CA---AC--TG---------TAATCTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACTCTTCCGTAAGG----ATCGCCCGACT----GACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-TCA-TTGCTCGC----CGAAG-ACAAGA-CTT-AG-AGTTAAACGACATT--GAATGTAT----ATGGCTAGAATTGAAAGTGAAACATAAACCTATTTTGTT
gi|162650 : TATTTCC----TTTCATCTCGTATGATCACATGTTCCACGGAGGTTATTCGCTT---C-GACTTATCACCCTGGTATTACATAATGTGTATTGATATATCTGTATACAGAGCGAGAGTGGGT-CT-CTTTGGTCAC--TAT-AA-ACTCAATCAAAAAGGGTTTAAACCGATTAACAGTTTCG---ATTT--GATTAT----TTGG--CT--ATACGGTTTAC-T--TATT-CTGTCCAGTGACGTCCACGAA-AATCCAGGTCC----AGC-TTCATCAAGT-ACTTC--CGAATTGA-------GTTCCGGC--TCGT---CA-TCCACTTTGTC-----TTC-----------CGGATC-ATTT-GA--CCTCGC-A--GAA--CTT--ATTTC-TAGC--CT-TCTG--TTATTTGTTCATCATAATGTCCAAAGCTTT---GC---T-C-CAA---A---GATACAC--------CA---AC--TG---------TATACTGA---TTTATGCT--CA--TTT-GATGTATTGGCTTTCACGTACACCTGGT-TGAAT--A-AC----AATACACCT-ACATCG---GAT---------CTTGCCT----TTTC--CATC--TA--CCAAACACCCTTT-GTAAGG----ATCGCCCGATT----GACAGATATTGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-TCA-CAGCTC-C----CGAAG-GCAAGA-CTA-AG-AGGTAAACGACATT--GAATGTAT----ATTGTTAGAATTGAAAGTGAATCATAAACCTATTCTGTT
gi|162651 : TACTTCT----TTTCTTCTCGCATGATCACATGTCCCTCGGAGGATACTCGCTCACTCTGACTTATCGCCCTAGTATTACATAATGTGTATAGATACATCTGCTCACAGAGCGAGAGTTGGT-CT-GTTTGGTCAC--TAT-CA-ACT----CAAAAAGGTCTTAAACCGATGAACAGTTTTG---ATTT--GATTAT----TTGG--CT--TTCCATTTTAC-T--TATA-CTGTCCGGTGACGTCCACAAACAATCCTGGTCC----AGC-TTGATGTAGT-ACATC--CGATTTGA-------G-----------------A-T-----------------C-----------CGGATG-AGTT-GG--CTTTTC-G--GAA--CTT--ATTGC-TAGC--AA-TCTCTTTTATTTGTTCATTATAATGTCAAAAGATTT---GC---C-A-CAA---C---AATACAC--------CA---AC--TG---------TATGCTGA---TTTGTGCT--CA--TTT-GATGTATTGGCTTTCGCGGAAACCTGGT-TAAAT--A-AC----AACAGATCT-ACATCA---TAT---------CTTGCCT----TTTC--CAAC--TA--CCAAACACCCTTCCGTAAGG----ATCGCCCGACT----GACAGATATGGCGGTGTTCTAGTCTAT-GTAAAA-GATACGA-TCA-CTGCTCGC----CGAAA-GCATGT-CTT-AG-AGTCAAACGACATT--GAATGTAT----ATGCTTTGAATTGAAAGTGAAGCATAAAACTATTTTGTT
gi|162652 : TTATGACTTTGGAATTACATAATGTGTGTTGATTTAAATATGTACAGGGCGAGAATAGG
gi|162652 : --TCAATAGTTCACTACAATGTTCAGAG-TTT---TC---TGC-CAA---A---GAAAGAA--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAG----ACAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATAC-G-TAAG-----CGATAAA-TTACACGCAATAAGAAGAACTGAA-CTT--G-AACCCAATAATATC--GAATGCTT----ATGGATAGAAaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgtcaatagttcactacaatgttcagagttttctgccaaagaaagaattactctatgcagaattattcaactttgatatattagcatttaccgagacctggttaacagacaatgtgtcaaacgatgatatattctttgacaattatttagtcccatttcgtaaagacagaccattagacgctcatggtggtattattgtatacgtaagcgataaattacacgcaataagaagaactgaacttgaacccaataatatcgaatgcttatggatagaa
gi|162653 : ttatgactttggaattacataatgtgtgttgatttaaatatgtacagggcgagaataggaacattcgcccttactcaatctaagactaagggacttaagtctctcacaagttttgaactattgtcttggttagctataatcataatgcaacatggggatattgaatccaatccaggcccaatccatacacttaattcgccagtcaataacgaaaacacttctcatcaacataatatgCTGGAATAATATAATGTCTACTGACATAATTGTTTATAGAATCCGAATAGGT-TT-GTTTGGTC-CTGTAT-CT-TCTTAAGCAAAAGG
gi|162653 : --TCAATTGTTCAATATAATGTTCAAAGTTTT---AT---T-CACAAG--A---AAGACAT--------T-----C--TG---------TACGCAGAACTTTTACA-----A--TTT-GATATATTAGTATTTACAGAGACTTGGC-T-AAT--A-tacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattatcaattgttcaatataatgttcaaagttttattcacaagaaagacattctgtacgcagaacttttacaatttgatatattagtatttacagagacttggctaata
gi|162654 : ctggaataatataatgtctactgacataattgtttatagaatccgaataggtttgtttggtcctgtatcttcttaagcaaaaggtacaaaaaaaaaattgaattcatttaaactaggtacatcgatggcaatgttactcataaaatcaggcgacatcgaagtcaatctacggccagtgttagcatctgagattgattcaaacttcttaaataatgtaaaaagcaaattaTGGTATAACATAATAGCTATAGATATTTCTGTATATAGGGTGAGGATAGGTAAA-TTTTG--CAT--TATACAGGCTAAATC-CAAAGGCTTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATT--TGAT
gi|162654 : ATATATTT-GA----TCTC-ACTAAA--CA---AT--C-TAAC---A-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA---A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATG----A-CAGAC-GTT-TT-GATGCTCATGGGGGAATTCTTGTATAT-ATAAAT-AACA-G----A-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AGATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATCATTTTGTTctcactaaacaatctaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgatgctcatgggggaattcttgtatatataaataacagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaatcattttgtt
gi|162655 : tggtataacataatagctatagatatttctgtatatagggtgaggataggtaaattttgcattatacaggctaaatccaaaggctttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaTGGTATAACATAATGGCTATAGATATTTCTGTATATAGGGTGAGGATAGGT-ATATTTTG--CAT--TATACAGGCTAAATC-CAAAGGCCTTAAAT---------GTTTTACTTATTTTGAATTATACACATGG--CTTAAACTG--CTACTT--TATT--TATCAGGTGATATTGAGAAA-AATCCTGGTCC------C-TT----TAAT-ATATC--TGAT
gi|162655 : --CA-TTTC--CC--TTGTCCATTACAACGTACAGAGCTTT---TT---A-C-AGA---A---AAAAGAC--------AT---AC--TC---------TATGCTGA---TCTAAA-A--CAC-TTT-GATATTTTAGCATTTACAGAAACGTGGCTT-AGTCCA-ACTACTGATACAAATGACATT-----AT---------CTA-----------CGACAAC--TA--CCATATACCGTTTCGTAATG----A-CAGAC-GTT-TT-GACGCTCATGGGGGAATTCTTAAATAT-A-TAAG---TA--ATAGA-CTACATGCGATAAGAAG-ATATGA-TCT-AG-AGATACCTGGTATT--GAATGCAT----TTGGTTAGAAATTCGCCTAAAAAATAAAATAATTTTGTTctcactaaacaatccaacatttcccttgtccattacaacgtacagagctttttacagaaaaaagacatactctatgctgatctaaaacactttgatattttagcatttacagaaacgtggcttagtccaactactgatacaaatgacattatctacgacaactaccatataccgtttcgtaatgacagacgttttgacgctcatgggggaattcttaaatatataagtaatagactacatgcgataagaagatatgatctagagatacctggtattgaatgcatttggttagaaattcgcctaaaaaataaaataattttgtt
gi|162656 : tggtataacataatggctatagatatttctgtatatagggtgaggataggtatattttgcattatacaggctaaatccaaaggccttaaatgttttacttattttgaattatacacatggcttaaactgctactttatttatcaggtgatattgagaaaaatcctggtccctttaatatatctgatctcactaaacaatccaaTATATCTGTTTACAGAGCGAGAGTGGAT-CT-TTTTGGTCAC--TAT-CA-AATCAAGCAAAAAGGGTTTAAACCGATGAACAATTTCG---ATTT--GATTAT----TTGG--CT--ATCCGTTTTAC-T--TATT-CTGTCCGGTGACATCCACGAA-AATCCCGGTCC----AGC-TTCATCTAGT-ACATC--AGATTTGA-------GTTCCGGC--TCTT---CA-TCCATTTTGTT-----TTC-----------CGGATC-ATTT-GA--CATTTC-A--GAA--CTT--ATTTC-TAGC--CA-TCTC--TCATTTGTTCATTATAATGTTCAAGGCTTT---GC---C-C-CAA---A---GATACAC--------CA---AC--TG---------TG------------------------TT-GATGTATTGGCTTTCACGGAAACCTGGT-TGAAT--A-AC----AATACACGT-ACATCG---GAT---------CTTGCAT----TTTC--CAAC--TA--CCAAACACCCATCCGTAAGG----ATCGCTCGACT----AACAGATATGGCGGTGTCCTAGTCTAT-GTTAAG-GATACGA-TCA-CTGCTCGC----CGAAG-ACAAGA-CTT-AG-AGTTAAACGACATT--GAATGTATGTGCATGGTTAGAATTGAAAGTGAAACATAAACCTATTCTGTT
gi|162657 : AC----TTGGACCT--A--CATTCTAC-TGCTGAC-TTGT--GGAGATATTCACCCA-AACCCAGGTCCTATAAGC-T-CAACT-GC-A-ACCAACAACTC-A-------GTT-------TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-G-------------GAAGCCTTGGACTTT-TAACATCA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTATTAGATA---T-T--AATT-A---GATACA--------------AT--T----------TACTTTGA---ACTATA-T--GGA-TTC-GATATATTAGCTTTCTATGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCG-TT--CCATAAACCAATAAGAAAAG----ATCG--C-GTT-GGAGATAGCCACGGTGGTGTTATTATGTAC-ATTAAA-GATACAATTCA-TTTTTC-T----CGTAG-AAATGA-CTT-AGAAATCAATCGTC-TG--GAATGCAT----ATGGGTTGAACTTACTATTAAACACAGACATATACT
gi|162658 : AC----TTGG--CT--ATCGGTCATA--T--TGTTGTTATCAGGAGATGTACACCCA-AACCCAGGCCC------CATTGAACTACTTATATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCCACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA---A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAG----ATCGC---ATT-GGAGACAACCACGGAGGGGTCATGTTATTC-ATTAAA-GACACAATACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AATCAACCCAC-TT--GAATGTAT----ATGG
gi|162659 : AC----TTGG--CT--ATCAGTCATA--T--TGTTGTTATCAGGAGATGTGCACCCA-AACCCAGGCCC------CATTGAACTACTTACATC--TGATACAA-------GCTCTGTCAGTAGTACTCAATCTACCTCATC-----TCA-----------TTG-TA-ATTTCGA---AGCTCTA--GA----TT---TTTC-GAAT--AA-TTTG--TCGTTAGTACACTACAACGTTCAGAG------------T-A-TAA---A---G---CAC--------AA---AT--TGGATATCATCTACTCCGA---ATTATA-T--GG--TTTTGATATACTTACTTTTACTGAAACATGGC-T---C--G-AT----GATTCTGTT-TCAACT---GATGATATGATGCTTCCTT----CTTT--TAAC--AAA-CCAGAAA-------GAAAAG----ATCGC---ATT-GGAGACTACCACGGAGGGGTCATGTTATTC-ATTAAA-GACACAATACA-CTAC-AAA----CGTAG-ACACGATCTT-GA-AATCAACCCAC-TT--GAATGTAT----ATGG
gi|162660 : TTTAC-TGTTGTT-TTG--CGGAGATATTCATCCA-AATCCAGGTCC----AGG-TTC---T-GT-ATAAC--CAACTCCAACAAACAGTTC--AT--TC-T---CA-T---TTTCTTCAACTTTTT-----------CAGATA-GTTTAGAAGCATT---A--GA---CTT--GTCACATAAT--TAATCTC--TC----GTTCACTATAATGTTCAGAG--TA---TCAAAT-C-TAA---ACTGGATACAC--------T-----T--TG---------TA--CCGA---ATTATA-TG-GG--TTT-GATATTCTAACTTTCTCTGAAACTTGGC-T---T--A-AC----GACTCTGTT-ATGTCA---GCTGAA------CTAAACT----TT----CAATCGTT--TCATA-ACC---CCGAAAGAAAATATCG--C-ATT-GGAGATAGTCATGGAGGTGTTATTATGTATAAACAAGAAATAC--TTCA--TATTTTT----CGTAG-ACAAGA-CCT-CGAAATCAATCG---TTTAGAATGTAT----TTGGGTGGAAATATCAATTAAACACAAACACATACTAT
gi|162661 : --TCAT---CA-TCC---TCATCCT---TTT-----------CAGATA-GTTT-GG--AAGCCT-T--GGA--CTT----TTC-ACAT--CA-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT---------------A---A---GATATAAATTAGATACA---AT--T----------TACTCTGA---ACTATA-T--GGA-TTT-GATATATTAGCTTTCTCTGAAACTTGGC-T---T--A-AT----GATACTATT-GCATC-----AT---------CTGATCTAGAATTCC--CAGCA-TT--CCATAAACCAATAAGAAAAG----ATCG--C-GTT-GGAGATAGCCATGGTGGTGTTATTATGTAC-ATTAAA-GATACAATTCA-TTTTTC-T----CGTAG-AAATGA-CTT-TGAAATCAATCGTC-TG--GAATGCAT----ATGGATTGAACTTACTATTAAACACAGACATATACT
gi|162662 : ---CA-TCCATTTCATC-----TTCTTCGTTCCTATCAGATA-GTTT-GG--AAGCCT-A--TGA--CTT--GTCACATA-----A-TCTT--TCTCTTGTTCATTATAATGTTCAAAGTAT-------------CAA---A---TATAAAT--------TAGATACAATC---------TACTCTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGCT-GCGTCAGCTGAT---------CTAGAAT----TT----CAAT--CATTCCCTCAACCAATAAGAAATG----ATCG--C-ATTCGA-GATAGCCACGTTGGTGTCATTATAAAT-ATTAAA-GAGACAATTTATTTTCTCGT------AAA-A-ATGA-CTTAAA-AATCAATCGTC-TT--GAATGCGT----TTTGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162663 : A-TCTT--TCTCTTATTCATTATAATGTTCCAAG--TA---TCAAAT-A-CAA---ATTAGATACA--------------A---TC---------TACACTGAAC-TGTATG-G---G--TTT-GATATATTAACATTCTTCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAG----ATCG--C-ATTGGG-GATAGCCACGGTGGTGTTATTATGTAT-ATTAAG-GAGACAATTCA-TTTTTC-T----CGTAG-ACATGA-CTT-AGAAATCAATCGTC-TA--GAATGCGT----ATGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162664 : A-TCTT--TCTCTTGTGCATTATAATGTTCAAAG--TA---TCAAAT-A-CAAATTA---GATACA----------A-------TC---------TACTCTGAAC-TGTATG----GG--TTT-GATATATTAACATTCTCCGAAACTTGGC-T---T--A-AT----GATACTGTT-GCGTCAGCTGAT---------CTAGAA-----TTTC--CATCA-TT--CCATAAACCAATAAGAAAAG----ATCG--C-ATTGGG-GATAGTCACGGTGGTGTTATTATGTAT-ATTAAA-GAGACAATTCA-TTTTTC-T----CGTAG-AAATGA-CTT-AGAAATCAATCGTC-TA--GAATGCGT----GTGGGTTGAAATTACTATTAAGCACAGACATATACTCTT
gi|162665 : --TCAATAGTTCACTACATTGTCCAGAGTTTT---CG---G-C-CAA---A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTAT--T--CAACTTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTACCATTTCGTAAAG----ACAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATAC-G-TAAG-----CGATAAA-TTACACGCAATAAGAAGAACTGAA-CTT--G-AACCCAATAATATC--GAATGCTT----ATGGATAGAA
gi|162666 : --TCAATAGTTCACTACAATGTCCAGAG-TTT---TC---TGC-CAA---A---GAAAGAT--------TT---AC--TC---------TATGCAGA---ATTATT-TAAC---TTT-GATATATTAGCATTTACCGAGACCTGGT-T-AAC--AGAC----AATGTGTC--AAA-CGAT-GAT---------ATATTCT----TTGA--CAAT--TA--TTTAGTCCCATTTCGTAAAG----ACAGACC-ATT--A-GACGCTCATGGTGGTATTATTGTATAC-G-TAAG-----CGATAAA-TTACACGCAATAAGAAGAACTGAA-CTT--G-AACCCAATAATATC--GAATGCTT----ATGGATAGAA