lowQualScore : 1 1 1111111111 1 111
lowQualScore : 0 7 77777 5 4 2 2 2 2 2 4 2 7 8 2 5 2222222222 5555 4 2 2 33 2 2 0 22 666666 77777 2 7 7777777 2 2 2 999 888888
lowQualScore : . . ..... . . . . . . . . . . . . . .......... .... . . . .. . . . .. ...... ..... . . ....... . . . ... ......
lowQualScore : 8 0 11111 7 9 9 9 9 9 7 9 7 1 0 7 3 5555555555 1111 6 9 7 77 3 5 8 33 444444 88888 4 9 6666666 4 5 7 222 888888
consensus : TAAAATATGTCTAGCTTATAATA-----GCATTTGGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGGTTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATG-TTTGTATTATTG-TTA------TTA-----TGTTATCTG-TTTGCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAAA--TTTAT------ATGAAACT
Reference ( gi|22704 ) : TAAAATATGTATAGCTTATGATA-----GTATTTGGGGGAA-TGT-T-T-CTTT-ACTCAGGAA-TAAGTTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGCCA-TTGAAC--ACACACATG-TTTGTATTATTG-TTA------TTA-----TGTTATCTG-TTTGCGCATGGTCAT-------TTGTGAC-T-A-ATGCATAAT--TTTAT------ATGAAACT
gi|22706 : TAAAATATGTCTATCTTATAATA-----GCATTTGGGGAAA-TGT-T-T-TTTT-ACACATGAA-TATGTTT-AA-A-TATATAGGTA----------GATAAAGATA--C-TTCATACGATTCG-TGTGCCA-CTGAAC--ACACACATG-TTTGTATTATTG-TTA------TTA-----TGCTATCTG-TTTCCTCATGGACAT-------TTGTGAC-T-A-ATGCATAAA--TTTAT------ATGAAACT
gi|22708 : TAAAATATGTCTAGCTTATAACA-----GCATTTGTGGAAA-TGT-T-T-TTTT-ACATAGGAA-TAAGTTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCACACGATTCG-CGTGCTA-TTGAAC--ACGCATATG-TTTGTATAATTG-TTA------TTA-----TGTTATCTG-TCTGCTCATAGTCAT-------TTGTGAC-T-T-ATACATAAA--TTTAT------ATGAAACT
gi|22707 : TAAAATATGTCTAGCTTATAAAA-----GCATTTGGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGGCTT-AA-A-TATATAGTTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGAAA-TAGAAC--ACACACATG-TTTGTATTATTG-TTA------TTA-----TGTTATCTG-TTTGCCCATGGTCAT-------TTGTGAC-T-T-ATGCAAAAA--TTCAA------ATGAAACT
gi|22709 : TAGAATATGTGTAGCTTATAATA-----GCATTTGGGGAAA-TAT-T-T-CTTT-GCACAGGAA-TGTGTTT-AA-A-TATATAGGAA----------GATAAAAATA--T-TTCATAAAATTCGCCGTGCCA-TTGA------ATACATG-TTTGTGTTTTTG-TTA------TTA-----TATTATCTG-TTTGCTCGTGGTCAT-------TTGTGAC-T-T-ATGCATAAA--CTTAT------ATGAAAC
gi|22710 : TAAAATATGTCTAGCTTATAATA-----GCTTTTGCGGAAA-TGT-T-TTCTTT-ACACAGGAA-TAGGTTT-AA-A-TATATAGATA----------GATAACGATA--T-TCCATACGTCTCG-TGTGCCA-TTGAAC--ACATGCATG-TTTGTTTTATTG-CTA------TAA-----TGTTATCTG-TTTGC------TCA----------------T-A-ATGCATACA--TTTAT------ATGA
gi|22711 : TAGAAAATGTCTAGCTTAAAATA-----GCATTTGGGGAAA-TAT-T-T-CTGT-ACACAGGAA-TAGGTTT-TA-A-C-CATAAGCA----------GATAAATATA--T-TACATACGATTCT-CGTGCTA-TTTAAC--ACATACATG-TTAGTATCATTG-TAC------TTA-----TGTTATCCT-TTTGCTCATGGTCAT-------TATTGAC-T-A-ATGCATAAA--CGTAT------ATGAAACT
gi|22713 : TAAAATATGTCTAACTTATTATA-----AAATTTGGGGAAA-TGT-A-A-CTTT-ACGCAGGAAATAGGTTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TACATACGATTCG-CATGCCA-TTGATC--ACAAACATG-TTT-TA------------------A-----TATTATCTG-TTTGCTCGTGTTCAT-------TTATGAC-T-A-ATGGATAA
gi|22712 : TAGAATATGTCTAGCTTATAATG-----GCATATAGGGAAAACAT-T-T--TTT-ACACGGGAA-TAGGTAT-AAGA-TATATAGGTA----------GACAAAGATA--T-TCCATATGATTCG-AGTACGA-TTGAAC--ACATACCTG-TTTGTATTATTG-TTA------TTA-----TGTTA---G-CTTAC----GGCCAT-------GAGTGAC-T-A-ATGCATAAA--CTTCT------ATGAAGCTacctaagtacaact
gi|22705 : TAACATATGTATAGCTTANNNNNNNNNNGCATTTGGGGAAA-TGT-T-T-CTTT-ACTCAGGAA-TAGGTTT-AA-AGTATA
gi|22714 : AAAATATGTTGCGCAAATCAC------GTTTTTAGGGAAA-TAT-T-T-TTTTTACACAGGAA-TAGGTTTTAA-A-TATATAGTTG----------GATA
gi|22715 : AAATATGTCTAGCTTATAATA-----GCGTTTGGGGGG--TGT-T-T-CTTT-ACACAGGAA-TAGATTT-AA-A-CAAATAGGTA----------GATAAAGATA--T-TCCATATAATTTG-CGTGCCA-TTGAAC--ACACACATG-TTTGTATTAATG-CTA------TTA-----TGTTTTCTG-TTTGCTCATTGTCAT-------TTGTGAC-T-A-ATGCAGAAA--TTTAC------ATGAAACT
gi|22716 : AAATATGTCAAGCATATAATG-----ACATTGAAGGAAA-TAT-AAT-CGTT-ACACAGAAA-TAGGTTT-AA-A-TATATATGTAACTTAGCAAAGGTAAAAATAGATGTTCAGCAGATTGA-CACGCCA-TTGAAC--ATGTAAATA-ATTGTAATATTG-TTA------TTA-----TGTTTTCTG-TTTGCTCATGGTCAT-------TTTTTAC-T-
gi|22718 : TATGTATAGCTTATAATA-----GCATTTGGAGAAA-TAT-T-T-CTTT-ACTCAGGAA-TAGGTTT-AA-AGTATA
gi|22717 : A-----GCATTTAAGGAAA-TATAT-C-CTTT-AA-AAGAAA-TACGTTTTAC-G-TATAAAGGTA----------GTTATAGATA----TTCACCCGAGTTA-TGTGTCA-TTGCAC--AATTGAATG-TTTGTAATATT--------------------------TG-TTTGCTCATGGTCAT-------TTGTAAC-TAA-ATGCATAA
gi|22719 : aaatatgtcaTTT-ACACAGGAA-TAGGTTTTAA-A-TAAACAGGTA----------GATAAAGATA--T-TTCAAA-----CG-CGCGCCA-TTGAACATATATACATG-TTTGTATTATTA-TTA------TTAT----TATTATat
gi|22720 : TA----------GATAAAAAT------TCATCTGACTGA-CGTGTTT-TTGAAC--ACATAATTG-TTGGT----TTT-CTA------TTC-----TGTTATATG-TTTGCTTATGGTCAT-------TTGTGAC-C-ATATGCATACA--TTTAT------ATGAAACT
gi|22721 : ATGTGAATCA-CACGCCAATTGAAC--ACATAAATG-TTT-TGTTATTG-TTA------TTA-----TGTTATCTG-TTTCCTCATGGTTATGTCACGGTTGTGAC-C-A-TTGCATAAA--TTTAT------ATGAAACT
gi|22722 : GCCA-TTGAAC--ACATACATGTTTTGTAATATT--TTACATATTTTAATAATTGTTCTCTGTTTTGCTCATGGTCAT-------TTGTGAC-
gi|22723 : ATA-TTTTCACT-TTGATTA------GTA-----TGTTTTCTG-TTTGCCCATGGTCAT-------ATGTGACAT-A-ATGCATAATTATTTATATTTAAATGAAACT
gi|22724 : ATTATTA-TTA------TTA-----TGCTATCTA-TTTGCTCTTGGTCAT-------GTGT--C-T-A-ATGTTTAAA--CTTAA------ATGAAACT
gi|22725 : TATTG-TTA------TTA-----TGTTATCTG-TTAGCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAAA--TTTAT------ATGAAACT
Alignments
lowQualScore : 1111111111
lowQualScore : 66666 33 2 2 2 2 2 2 2 5 2 5 1111111111 33 2 1 3 2 2 33 2 0 2 666666 77777 2 7777777 2 2 2 33 777777
lowQualScore : ..... .. . . . . . . . . . . .......... .. . . . . . .. . . . ...... ..... . ....... . . . .. ......
lowQualScore : 77777 77 7 7 7 7 5 5 5 0 5 0 7777777777 99 9 4 1 7 5 44 4 2 1 111111 44444 2 2222222 2 4 5 44 777777
consensus : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
Reference ( family-770 ) : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
gi|22704 : TAAAATATGTATAGCTTATGATA-----GTATTT--GGGGGAA-TGT-T-T-CTTT-ACTCAGGAA-TAAG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGCCA-TTGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCGCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--TTTTAT------ATGAAACT
gi|22705 : TAACATATGTATAGCTTANNNNNNNNNNGCATTT--GGGGAAA-TGT-T-T-CTTT-ACTCAGGAA-TAGG-TTT-AA-AGTATA
gi|22706 : TAAAATATGTCTATCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-TTTT-ACACATGAA-TATG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--C-TTCATACGATTCG-TGTGCCA-CTGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGCTATCTGTTT-CCTCATGGACAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
gi|22707 : TAAAATATGTCTAGCTTATAAAA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-CTT-AA-A-TATATAGTTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGAAA-TAGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCCCATGGTCAT-------TTGTGAC-T-T-ATGCAAAA--ATTCAA------ATGAAACT
gi|22708 : TAAAATATGTCTAGCTTATAACA-----GCATTT--GTGGAAA-TGT-T-T-TTTT-ACATAGGAA-TAAG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCACACGATTCG-CGTGCTA-TTGAAC--ACGCATATGTTT-GTATAATTG-TTA------TTA-----TGTTATCTGTCT-GCTCATAGTCAT-------TTGTGAC-T-T-ATACATAA--ATTTAT------ATGAAACT
gi|22709 : TAGAATATGTGTAGCTTATAATA-----GCATTT--GGGGAAA-TAT-T-T-CTTT-GCACAGGAA-TGTG-TTT-AA-A-TATATAGGAA----------GATAAAAATA--T-TTCATAAAATTCGCCGTGCCA-TTGA------ATACATGTTT-GTGTTTTTG-TTA------TTA-----TATTATCTGTTT-GCTCGTGGTCAT-------TTGTGAC-T-T-ATGCATAA--ACTTAT------ATGAAAC
gi|22710 : TAAAATATGTCTAGCTTATAATA-----GCTTTT--GCGGAAA-TGT-T-TTCTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGATA----------GATAACGATA--T-TCCATACGTCTCG-TGTGCCA-TTGAAC--ACATGCATGTTT-GTTTTATTG-CTA------TAA-----TGTTATCTGTTT-GCTCA----------------------T-A-ATGCATAC--ATTTAT------ATGA
gi|22711 : TAGAAAATGTCTAGCTTAAAATA-----GCATTT--GGGGAAA-TAT-T-T-CTGT-ACACAGGAA-TAGG-TTT-TA-A-C-CATAAGCA----------GATAAATATA--T-TACATACGATTCT-CGTGCTA-TTTAAC--ACATACATGTTA-GTATCATTG-TAC------TTA-----TGTTATCCTTTT-GCTCATGGTCAT-------TATTGAC-T-A-ATGCATAA--ACGTAT------ATGAAACT
gi|22712 : TAGAATATGTCTAGCTTATAATG-----GCATAT--AGGGAAAACAT-T-T--TTT-ACACGGGAA-TAGG-TAT-AAGA-TATATAGGTA----------GACAAAGATA--T-TCCATATGATTCG-AGTACGA-TTGAAC--ACATACCTGTTT-GTATTATTG-TTA------TTA-----TGTTA--------GCTTACGGCCAT-------GAGTGAC-T-A-ATGCATAA--ACTTCT------ATGAAGCT
gi|22713 : TAAAATATGTCTAACTTATTATA-----AAATTT--GGGGAAA-TGT-A-A-CTTT-ACGCAGGAAATAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TACATACGATTCG-CATGCCA-TTGATC--ACAAACATGTTT--TA------------------A-----TATTATCTGTTT-GCTCGTGTTCAT-------TTATGAC-T-A-ATGGATAA--ACCTAA------GTACAACT
gi|22714 : AAAATATGTT--GCGCA-AATC-----ACGTTTTTAGGGAAA-TAT-T-T-TTTTTACACAGGAA-TAGGTTTT-AA-A-TATATAGTTG----------GATA
gi|22715 : AAATATGTCTAGCTTATAATA-----GCGTTT--GGGGGG--TGT-T-T-CTTT-ACACAGGAA-TAGA-TTT-AA-A-CAAATAGGTA----------GATAAAGATA--T-TCCATATAATTTG-CGTGCCA-TTGAAC--ACACACATGTTT-GTATTAATG-CTA------TTA-----TGTTTTCTGTTT-GCTCATTGTCAT-------TTGTGAC-T-A-ATGCAGAA--ATTTAC------ATGAAACT
gi|22716 : AAATATGTCAAGCATATAATG-----ACATTG--AAGGAAA-TAT-AAT-CGTT-ACACAGAAA-TAGG-TTT-AA-A-TATATATGTAACTTAGCAAAGGTAAAAATAGATGTTCAGCAGATTGA-CACGCCA-TTGAAC--ATGTAAATAATT-GTAATATTG-TTA------TTA-----TGTTTTCTGTTT-GCTCATGGTCAT-------TTTTTAC-T-
gi|22717 : AAATATGTC---------A-A-----GCATTT--AAGGAAA-TATAT-C-CTTT-AAA-AGAAA-TACG-TTTTAC-G-TATAAAGGTA----------GTTATAGATA--T-T-CACCCGAGTTA-TGTGTCA-TTGCAC--AATTGAATGTTT-GTAATATT--------------------------TGTTT-GCTCATGGTCAT-------TTGTAAC-TAA-ATGCATAA--AT
gi|22718 : TATGTATAGCTTATAATA-----GCATTT--GGAGAAA-TAT-T-T-CTTT-ACTCAGGAA-TAGG-TTT-AA-AGTATA
gi|22719 : TTT-ACACAGGAA-TAGG-TTTTAA-A-TAAACAGGTA----------GATAAAGATA--T-TTCAAA-----CG-CGCGCCA-TTGAACATATATACATGTTT-GTATTATTA-TTA------TTAT----TATTAT
gi|22720 : TA----------GATAAAAAT------TCATCTGACTGA-CGTGTTT-TTGAAC--ACATAATTGTTG-GT----TTT-CTA------TTC-----TGTTATATGTTT-GCTTATGGTCAT-------TTGTGAC-C-ATATGCATAC--ATTTAT------ATGAAACT
gi|22721 : ATGTGAATCA-CACGCCAATTGAAC--ACATAAATGTTT--TGTTATTG-TTA------TTA-----TGTTATCTGTTT-CCTCATGGTTATGTCACGGTTGTGAC-C-A-TTGCATAA--ATTTAT------ATGAAACT
gi|22722 : GCCA-TTGAAC--ACATACATGTTTTGTAATATT--TTACATATTTTAATAATTGTTCTCTGTTTTGCTCATGGTCAT-------TTGTGAC-
gi|22723 : ATATTT-TCACT-TTGATTA------GTA-----TGTTTTCTGTTT-GCCCATGGTCAT-------ATGTGACAT-A-ATGCATAATTATTTATATTTAAATGAAACT
gi|22724 : ATTATTA-TTA------TTA-----TGCTATCTATTT-GCTCTTGGTCAT-------GTGT--C-T-A-ATGTTTAA--ACTTAA------ATGAAACT
gi|22725 : TATTG-TTA------TTA-----TGTTATCTGTTA-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
Alignments
lowQualScore : 1111111111
lowQualScore : 66666 33 2 2 2 2 2 2 2 5 2 5 1111111111 33 2 1 3 2 2 33 2 0 2 666666 77777 2 7777777 2 2 2 33 777777
lowQualScore : ..... .. . . . . . . . . . . .......... .. . . . . . .. . . . ...... ..... . ....... . . . .. ......
lowQualScore : 77777 77 7 7 7 7 5 5 5 0 5 0 7777777777 99 9 4 1 7 5 44 4 2 1 111111 44444 2 2222222 2 4 5 44 777777
consensus : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
Reference ( family-770 ) : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
gi|22704 : TAAAATATGTATAGCTTATGATA-----GTATTT--GGGGGAA-TGT-T-T-CTTT-ACTCAGGAA-TAAG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGCCA-TTGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCGCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--TTTTAT------ATGAAACT
gi|22705 : TAACATATGTATAGCTTANNNNNNNNNNGCATTT--GGGGAAA-TGT-T-T-CTTT-ACTCAGGAA-TAGG-TTT-AA-AGTATA
gi|22706 : TAAAATATGTCTATCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-TTTT-ACACATGAA-TATG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--C-TTCATACGATTCG-TGTGCCA-CTGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGCTATCTGTTT-CCTCATGGACAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
gi|22707 : TAAAATATGTCTAGCTTATAAAA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-CTT-AA-A-TATATAGTTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGAAA-TAGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCCCATGGTCAT-------TTGTGAC-T-T-ATGCAAAA--ATTCAA------ATGAAACT
gi|22708 : TAAAATATGTCTAGCTTATAACA-----GCATTT--GTGGAAA-TGT-T-T-TTTT-ACATAGGAA-TAAG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCACACGATTCG-CGTGCTA-TTGAAC--ACGCATATGTTT-GTATAATTG-TTA------TTA-----TGTTATCTGTCT-GCTCATAGTCAT-------TTGTGAC-T-T-ATACATAA--ATTTAT------ATGAAACT
gi|22709 : TAGAATATGTGTAGCTTATAATA-----GCATTT--GGGGAAA-TAT-T-T-CTTT-GCACAGGAA-TGTG-TTT-AA-A-TATATAGGAA----------GATAAAAATA--T-TTCATAAAATTCGCCGTGCCA-TTGA------ATACATGTTT-GTGTTTTTG-TTA------TTA-----TATTATCTGTTT-GCTCGTGGTCAT-------TTGTGAC-T-T-ATGCATAA--ACTTAT------ATGAAAC
gi|22710 : TAAAATATGTCTAGCTTATAATA-----GCTTTT--GCGGAAA-TGT-T-TTCTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGATA----------GATAACGATA--T-TCCATACGTCTCG-TGTGCCA-TTGAAC--ACATGCATGTTT-GTTTTATTG-CTA------TAA-----TGTTATCTGTTT-GCTCA----------------------T-A-ATGCATAC--ATTTAT------ATGA
gi|22711 : TAGAAAATGTCTAGCTTAAAATA-----GCATTT--GGGGAAA-TAT-T-T-CTGT-ACACAGGAA-TAGG-TTT-TA-A-C-CATAAGCA----------GATAAATATA--T-TACATACGATTCT-CGTGCTA-TTTAAC--ACATACATGTTA-GTATCATTG-TAC------TTA-----TGTTATCCTTTT-GCTCATGGTCAT-------TATTGAC-T-A-ATGCATAA--ACGTAT------ATGAAACT
gi|22712 : TAGAATATGTCTAGCTTATAATG-----GCATAT--AGGGAAAACAT-T-T--TTT-ACACGGGAA-TAGG-TAT-AAGA-TATATAGGTA----------GACAAAGATA--T-TCCATATGATTCG-AGTACGA-TTGAAC--ACATACCTGTTT-GTATTATTG-TTA------TTA-----TGTTA--------GCTTACGGCCAT-------GAGTGAC-T-A-ATGCATAA--ACTTCT------ATGAAGCT
gi|22713 : TAAAATATGTCTAACTTATTATA-----AAATTT--GGGGAAA-TGT-A-A-CTTT-ACGCAGGAAATAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TACATACGATTCG-CATGCCA-TTGATC--ACAAACATGTTT--TA------------------A-----TATTATCTGTTT-GCTCGTGTTCAT-------TTATGAC-T-A-ATGGATAA--ACCTAA------GTACAACT
gi|22714 : AAAATATGTT--GCGCA-AATC-----ACGTTTTTAGGGAAA-TAT-T-T-TTTTTACACAGGAA-TAGGTTTT-AA-A-TATATAGTTG----------GATA
gi|22715 : AAATATGTCTAGCTTATAATA-----GCGTTT--GGGGGG--TGT-T-T-CTTT-ACACAGGAA-TAGA-TTT-AA-A-CAAATAGGTA----------GATAAAGATA--T-TCCATATAATTTG-CGTGCCA-TTGAAC--ACACACATGTTT-GTATTAATG-CTA------TTA-----TGTTTTCTGTTT-GCTCATTGTCAT-------TTGTGAC-T-A-ATGCAGAA--ATTTAC------ATGAAACT
gi|22716 : AAATATGTCAAGCATATAATG-----ACATTG--AAGGAAA-TAT-AAT-CGTT-ACACAGAAA-TAGG-TTT-AA-A-TATATATGTAACTTAGCAAAGGTAAAAATAGATGTTCAGCAGATTGA-CACGCCA-TTGAAC--ATGTAAATAATT-GTAATATTG-TTA------TTA-----TGTTTTCTGTTT-GCTCATGGTCAT-------TTTTTAC-T-
gi|22717 : AAATATGTC---------A-A-----GCATTT--AAGGAAA-TATAT-C-CTTT-AAA-AGAAA-TACG-TTTTAC-G-TATAAAGGTA----------GTTATAGATA--T-T-CACCCGAGTTA-TGTGTCA-TTGCAC--AATTGAATGTTT-GTAATATT--------------------------TGTTT-GCTCATGGTCAT-------TTGTAAC-TAA-ATGCATAA--AT
gi|22718 : TATGTATAGCTTATAATA-----GCATTT--GGAGAAA-TAT-T-T-CTTT-ACTCAGGAA-TAGG-TTT-AA-AGTATA
gi|22719 : TTT-ACACAGGAA-TAGG-TTTTAA-A-TAAACAGGTA----------GATAAAGATA--T-TTCAAA-----CG-CGCGCCA-TTGAACATATATACATGTTT-GTATTATTA-TTA------TTAT----TATTAT
gi|22720 : TA----------GATAAAAAT------TCATCTGACTGA-CGTGTTT-TTGAAC--ACATAATTGTTG-GT----TTT-CTA------TTC-----TGTTATATGTTT-GCTTATGGTCAT-------TTGTGAC-C-ATATGCATAC--ATTTAT------ATGAAACT
gi|22721 : ATGTGAATCA-CACGCCAATTGAAC--ACATAAATGTTT--TGTTATTG-TTA------TTA-----TGTTATCTGTTT-CCTCATGGTTATGTCACGGTTGTGAC-C-A-TTGCATAA--ATTTAT------ATGAAACT
gi|22722 : GCCA-TTGAAC--ACATACATGTTTTGTAATATT--TTACATATTTTAATAATTGTTCTCTGTTTTGCTCATGGTCAT-------TTGTGAC-
gi|22723 : ATATTT-TCACT-TTGATTA------GTA-----TGTTTTCTGTTT-GCCCATGGTCAT-------ATGTGACAT-A-ATGCATAATTATTTATATTTAAATGAAACT
gi|22724 : ATTATTA-TTA------TTA-----TGCTATCTATTT-GCTCTTGGTCAT-------GTGT--C-T-A-ATGTTTAA--ACTTAA------ATGAAACT
gi|22725 : TATTG-TTA------TTA-----TGTTATCTGTTA-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
blockSeqs : NNNNN TT A A A T T A T T G G ACTTAGCAAA GA G T C C A AT T A CATATT ATAAT T GTCACGG A A T TT ATTTAA
blockSeqs : . . . . . . . . . T . G . . . T T . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T C . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T A . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . C C . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . A C . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . C T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . A C . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . C T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T A . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T C . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . .
blockSeqCons :
originalCons : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
finalCons : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
Alignments
lowQualScore : 1111111111
lowQualScore : 66666 33 2 2 2 2 2 2 2 5 2 5 1111111111 33 2 1 3 2 2 33 2 0 2 666666 77777 2 7777777 2 2 2 33 777777
lowQualScore : ..... .. . . . . . . . . . . .......... .. . . . . . .. . . . ...... ..... . ....... . . . .. ......
lowQualScore : 77777 77 7 7 7 7 5 5 5 0 5 0 7777777777 99 9 4 1 7 5 44 4 2 1 111111 44444 2 2222222 2 4 5 44 777777
consensus : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
Reference ( family-770 ) : TAAAATATGTCTAGCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATACGATTCG-CGTGCCA-TTGAAC--ACATACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
gi|22704 : TAAAATATGTATAGCTTATGATA-----GTATTT--GGGGGAA-TGT-T-T-CTTT-ACTCAGGAA-TAAG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGCCA-TTGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCGCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--TTTTAT------ATGAAACT
gi|22705 : TAACATATGTATAGCTTANNNNNNNNNNGCATTT--GGGGAAA-TGT-T-T-CTTT-ACTCAGGAA-TAGG-TTT-AA-AGTATA
gi|22706 : TAAAATATGTCTATCTTATAATA-----GCATTT--GGGGAAA-TGT-T-T-TTTT-ACACATGAA-TATG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--C-TTCATACGATTCG-TGTGCCA-CTGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGCTATCTGTTT-CCTCATGGACAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT
gi|22707 : TAAAATATGTCTAGCTTATAAAA-----GCATTT--GGGGAAA-TGT-T-T-CTTT-ACACAGGAA-TAGG-CTT-AA-A-TATATAGTTA----------GATAAAGATA--T-TTCATATGATTCG-CGTGAAA-TAGAAC--ACACACATGTTT-GTATTATTG-TTA------TTA-----TGTTATCTGTTT-GCCCATGGTCAT-------TTGTGAC-T-T-ATGCAAAA--ATTCAA------ATGAAACT
gi|22708 : TAAAATATGTCTAGCTTATAACA-----GCATTT--GTGGAAA-TGT-T-T-TTTT-ACATAGGAA-TAAG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TTCACACGATTCG-CGTGCTA-TTGAAC--ACGCATATGTTT-GTATAATTG-TTA------TTA-----TGTTATCTGTCT-GCTCATAGTCAT-------TTGTGAC-T-T-ATACATAA--ATTTAT------ATGAAACT
gi|22709 : TAGAATATGTGTAGCTTATAATA-----GCATTT--GGGGAAA-TAT-T-T-CTTT-GCACAGGAA-TGTG-TTT-AA-A-TATATAGGAA----------GATAAAAATA--T-TTCATAAAATTCGCCGTGCCA-TTGA------ATACATGTTT-GTGTTTTTG-TTA------TTA-----TATTATCTGTTT-GCTCGTGGTCAT-------TTGTGAC-T-T-ATGCATAA--ACTTAT------ATGAAAC
gi|22710 : TAAAATATGTCTAGCTTATAATA-----GCTTTT--GCGGAAA-TGT-T-TTCTTT-ACACAGGAA-TAGG-TTT-AA-A-TATATAGATA----------GATAACGATA--T-TCCATACGTCTCG-TGTGCCA-TTGAAC--ACATGCATGTTT-GTTTTATTG-CTA------TAA-----TGTTATCTGTTT-GCTCA----------------------T-A-ATGCATAC--ATTTAT------ATGA
gi|22711 : TAGAAAATGTCTAGCTTAAAATA-----GCATTT--GGGGAAA-TAT-T-T-CTGT-ACACAGGAA-TAGG-TTT-TA-A-C-CATAAGCA----------GATAAATATA--T-TACATACGATTCT-CGTGCTA-TTTAAC--ACATACATGTTA-GTATCATTG-TAC------TTA-----TGTTATCCTTTT-GCTCATGGTCAT-------TATTGAC-T-A-ATGCATAA--ACGTAT------ATGAAACT
gi|22712 : TAGAATATGTCTAGCTTATAATG-----GCATAT--AGGGAAAACAT-T-T--TTT-ACACGGGAA-TAGG-TAT-AAGA-TATATAGGTA----------GACAAAGATA--T-TCCATATGATTCG-AGTACGA-TTGAAC--ACATACCTGTTT-GTATTATTG-TTA------TTA-----TGTTA--------GCTTACGGCCAT-------GAGTGAC-T-A-ATGCATAA--ACTTCT------ATGAAGCT
gi|22713 : TAAAATATGTCTAACTTATTATA-----AAATTT--GGGGAAA-TGT-A-A-CTTT-ACGCAGGAAATAGG-TTT-AA-A-TATATAGGTA----------GATAAAGATA--T-TACATACGATTCG-CATGCCA-TTGATC--ACAAACATGTTT--TA------------------A-----TATTATCTGTTT-GCTCGTGTTCAT-------TTATGAC-T-A-ATGGATAA--ACCTAA------GTACAACT
gi|22714 : AAAATATGTT--GCGCA-AATC-----ACGTTTTTAGGGAAA-TAT-T-T-TTTTTACACAGGAA-TAGGTTTT-AA-A-TATATAGTTG----------GATA
gi|22715 : AAATATGTCTAGCTTATAATA-----GCGTTT--GGGGGG--TGT-T-T-CTTT-ACACAGGAA-TAGA-TTT-AA-A-CAAATAGGTA----------GATAAAGATA--T-TCCATATAATTTG-CGTGCCA-TTGAAC--ACACACATGTTT-GTATTAATG-CTA------TTA-----TGTTTTCTGTTT-GCTCATTGTCAT-------TTGTGAC-T-A-ATGCAGAA--ATTTAC------ATGAAACT
gi|22716 : AAATATGTCAAGCATATAATG-----ACATTG--AAGGAAA-TAT-AAT-CGTT-ACACAGAAA-TAGG-TTT-AA-A-TATATATGTAACTTAGCAAAGGTAAAAATAGATGTTCAGCAGATTGA-CACGCCA-TTGAAC--ATGTAAATAATT-GTAATATTG-TTA------TTA-----TGTTTTCTGTTT-GCTCATGGTCAT-------TTTTTAC-T-
gi|22717 : AAATATGTC---------A-A-----GCATTT--AAGGAAA-TATAT-C-CTTT-AAA-AGAAA-TACG-TTTTAC-G-TATAAAGGTA----------GTTATAGATA--T-T-CACCCGAGTTA-TGTGTCA-TTGCAC--AATTGAATGTTT-GTAATATT--------------------------TGTTT-GCTCATGGTCAT-------TTGTAAC-TAA-ATGCATAA--AT
gi|22718 : TATGTATAGCTTATAATA-----GCATTT--GGAGAAA-TAT-T-T-CTTT-ACTCAGGAA-TAGG-TTT-AA-AGTATA
gi|22719 : TTT-ACACAGGAA-TAGG-TTTTAA-A-TAAACAGGTA----------GATAAAGATA--T-TTCAAA-----CG-CGCGCCA-TTGAACATATATACATGTTT-GTATTATTA-TTA------TTAT----TATTAT
gi|22720 : TA----------GATAAAAAT------TCATCTGACTGA-CGTGTTT-TTGAAC--ACATAATTGTTG-GT----TTT-CTA------TTC-----TGTTATATGTTT-GCTTATGGTCAT-------TTGTGAC-C-ATATGCATAC--ATTTAT------ATGAAACT
gi|22721 : ATGTGAATCA-CACGCCAATTGAAC--ACATAAATGTTT--TGTTATTG-TTA------TTA-----TGTTATCTGTTT-CCTCATGGTTATGTCACGGTTGTGAC-C-A-TTGCATAA--ATTTAT------ATGAAACT
gi|22722 : GCCA-TTGAAC--ACATACATGTTTTGTAATATT--TTACATATTTTAATAATTGTTCTCTGTTTTGCTCATGGTCAT-------TTGTGAC-
gi|22723 : ATATTT-TCACT-TTGATTA------GTA-----TGTTTTCTGTTT-GCCCATGGTCAT-------ATGTGACAT-A-ATGCATAATTATTTATATTTAAATGAAACT
gi|22724 : ATTATTA-TTA------TTA-----TGCTATCTATTT-GCTCTTGGTCAT-------GTGT--C-T-A-ATGTTTAA--ACTTAA------ATGAAACT
gi|22725 : TATTG-TTA------TTA-----TGTTATCTGTTA-GCTCATGGTCAT-------TTGTGAC-T-A-ATGCATAA--ATTTAT------ATGAAACT