lowQualScore : 1 55555555555555555555555555555555555555555555555555555555 333333333333333333333333333333333333333333 1
lowQualScore : 2 0 4444 2 00000000000000000000000000000000000000000000000000000000 2 111111111111111111111111111111111111111111 2 6 777 33 2 22 3 0 2 4
lowQualScore : . . .... . ........................................................ . .......................................... . . ... .. . .. . . . .
lowQualScore : 2 1 7777 2 77777777777777777777777777777777777777777777777777777777 0 999999999999999999999999999999999999999999 0 0 111 11 0 99 1 3 2 4
consensus : AAATNTAGCTCATTTCATA----TGC-ACC--------------------C---------------------TCT-----------AA-CTGCT--------------------C---------------------AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTAT--CTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
Reference ( gi|155224 ) : AAATATAGCTCATTTCATA----TGC-ACC--------------------C---------------------TCC-----------AA-CTGCT--------------------C---------------------AAGAGAAA-GTAGCTCTTGA---TTT-TTT-ATGTAT--CTGTCTGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155225 : AAATTTAGCTCATTTCATA----TTC-ACT--------------------C---------------------TCT-----------AA-CTGCT--------------------C---------------------AAGAGAAA-GTAGTTCTTGA---TTT-TTT-GTGTAT--CTGTAGGACGAAAGTAACTT-TTTA-ATGTACGAAAAATA
gi|155227 : AAAT-TATCTCATTTCATA----TGC-ACC--------------------C---------------------TCT-----------AA-CTGCT--------------------C---------------------AAGAGAAA-GTAGTTATTGA---TGT-GTT-GTGTAT--ATGTCGGATGAAAGTAACTT-TTCA-ATGTATGAAAAA
gi|155226 : aAAATTTATCTAATTTCATA----TGC-ACC--------------------C---------------------TCG-----------AA-CTGCT--------------------C---------------------AAGAAAAAAGTAGTTGTTGA---TTG-TTT-ATGTAT--CTGTCGCATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155228 : AAATTTACATCATTTCATA----TGC-ACC--------------------C---------------------TCT-----------TA-CTGCT--------------------C---------------------AAGAAAAA-GTAGTT-TTG--------TTT-ATGTAT--CTGTCGGATGAAAATAACTG-TTCA-AAGTACGAAAAATA
gi|155236 : AATTGTAACTGGTTTCATA----TGC-ACC--------------------CAAAAACTGCTTCTTCATTGTTTCA-----------AA-CTACT--------------------T---------------------AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTAT--CTGTCAGATGATAGTAACTT-TTTA-ATGTACGAAAAA
gi|155230 : AAATTAAGCTCATTTCATA----TGC-ACC--------------------C---------------------TCT-----------AG-CTGCT--------------------TCCTAATCGTCTCAAACTACTTAAGAGAAA-GTAGTGTTT-----TTT-TTA-ATGTAT--TTGTCAGATGGAAGTATCTT-TTCG-ATGTACGAAAAATA
gi|155233 : AAATATAGTTCATTTCATA----TAT-ACC--------------------CCTTAGATT-------------TCA-----------AA-CTAAT--------------------C---------------------AAGAGAAA-GTAGTTCGTGA---TTG-TTT-ATGTAT--ATGTCTGATG------ACTG-TTAA-ATATACAAAAAA
gi|155232 : AAATTTATCTCATTTCATAAAAATGC-ACC--------------------C---------------------TCT-----------AA-CTGCT--------------------C---------------------AAGAAAAA-GTAGTTCTTGA---TTT-T
gi|155235 : AAATGTAGCTCATTATATA----TG-------------------------------------------------------------AA---GTT--------------------T---------------------GGGAGAAA-GTAGTTATTCATGTTTT-TTT-AAG-AT--TTGTCGGAC--AACTAACTT-TTCCTTTGTACGAAAAACA
gi|155237 : AATGTAGCTCATTATATA----TGC-ACT--------------------G---------------------CTC-----------AA-CTACTTCTTATCACTTCAAATTTCCC---------------------AAGAGAAT-GTAGTTCCCAA---TTC-TTT-ATATATAATTG---GGTGACA--AACTT-TTCATATGTTTGAAAAATA
gi|155238 : ATGTAGCTCATTTCATA----TGC-ACC--------------------C---------------------CTT-----------AA-CTACT--------------------G---------------------AAGAGAAA-GTAGTTTTTTA---TTT-TTTCCTGTAT--CTGTCGAATGAAAATTGCTT-TTCA-ATGTAAGAAAAATA
gi|155231 : TGTAGCTCATTTTATA----TGC-ACC--------------------TAAAAACTGCT-----------TCCTCATTGTTTCAAA-CTACT--------------------T---------------------AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTGT--CTGTCAGATGATAGTAACTT-TTAA-ATGTACGAAAAA
gi|155239 : agatTATCTCATTTCATA----TGCTGCC--------------------C---------------------TCT-----------AA-CTACT--------------------C---------------------AATAAAAA-GTAGTTTGTGAC--TTT-TTT-ATCTAT--CTGTCAGATAAAGGTAACTT-TTCA-ATGTACTAAGAATA
gi|155240 : GTTCATTTCATT----TGC-ACCAAAATACTGCTTCCTTATGGT---------------------TCC-----------AAACTACT--------------------C---------------------AAGAAAAA-GTAGTTCTTGA---TTA-TTT-ATGTAT--CCGTCAGATTATAATAAC
gi|155229 : CTCATTTCATA----TGC-ACC--------------------C---------------------TCT-----------TA-CTGCT--------------------CTTGA-----------------AAGAGAAA-GTAGTTTTTGA---TTT-T---GTGTAT--CTGTCGTATGAAAGTAACTT-TTCA-ATGTACGAAA
gi|155241 : aaaatcatTCATTTCATA----TGC-ACC--------------------G---------------------TCT-----------AA-CTGCT--------------------C---------------------AAGAAAAA-GTAGTTCTTGA---TTTGTTT-ATGTA
gi|155242 : ATTTCATA----TGC-ACT--------------------A---------------------TCT-----------AA-CTACT--------------------C---------------------AAGAGAAA-GTAGTTCTTGC---TTA-TTT-ATGTTT--CTGTCAGATGATAGCAACTT-TTTA-ATGTACGAAAAA
gi|155243 : TA----TAC-ACC--------------------C---------------------TCT-----------AA-CTGCT--------------------C---------------------AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTAT--CTGTCTGATGAAAGTAACTT-TTCA-AAGTACAAAAAATA
gi|155244 : ---------------------TCA-----------AA-CTACT--------------------C---------------------AAGAGAAA-GTCGTTCTTGAA--TTT-TTT-ATTTAT--CTGTTGGATGGAAGTAACTT-TTCA-GTGTACGAAAACTA
gi|155234 : ---------------------TCA-----------AA-CTACT--------------------C---------------------AACAAAAT-GTAGTTCGTAA---CTT-TTC-AAGTAT--TTGTTGAAAGACAGTAACTTGTCCT-GTGTATGAAAACTA
gi|155245 : aaaattagtttattatatatgcaccatttaactgcttcctgttcatt---TTG-TTC-ATGTAT--CTGTCGGATGAAAGTAATTT-TTCA-ATGTATGAAAAATA
Alignments
lowQualScore : 55555555555555555555555555555555555555555555555555555555555555555555 11111111111111111111
lowQualScore : 3 0 4444 2 55555555555555555555555555555555555555555555555555555555555555555555 55555555555555555555 4444 1 666 22 1 2 4
lowQualScore : . . .... . .................................................................... .................... .... . ... .. . . .
lowQualScore : 6 7 2222 0 11111111111111111111111111111111111111111111111111111111111111111111 55555555555555555555 0000 9 888 66 9 1 2
consensus : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
Reference ( family-767 ) : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155224 : AAATATAGCTCATTTCATA----TGC-ACC-------------C----------T--C------C-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGCTCTTGA---TTT-TTT-ATGTATCTGTCTGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155225 : AAATTTAGCTCATTTCATA----TTC-ACT-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-GTGTATCTGTAGGACGAAAGTAACTT-TTTA-ATGTACGAAAAATA
gi|155226 : AAATTTATCTAATTTCATA----TGC-ACC-------------C----------T--C------G-----------A---------------------ACTGCT--------------------C----AAGAAAAAAGTAGTTGTTGA---TTG-TTT-ATGTATCTGTCGCATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155227 : AAAT-TATCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTATTGA---TGT-GTT-GTGTATATGTCGGATGAAAGTAACTT-TTCA-ATGTATGAAAAA
gi|155228 : aAAATTTACATCATTTCATA----TGC-ACC-------------C----------T--C------T-----------T---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTT-TTG--------TTT-ATGTATCTGTCGGATGAAAATAACTG-TTCA-AAGTACGAAAAATA
gi|155229 : AAATC-ATCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------T---------------------ACTGCT--------------------CTTGAAAGAGAAA-GTAGTTTTTGA---TTT-T---GTGTATCTGTCGTATGAAAGTAACTT-TTCA-ATGTACGAAA
gi|155230 : aAAATTAAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------AGCTGCTTCCTAATCGTCTCAAACTACT--------------------T----AAGAGAAA-GTAGTGTTT-----TTT-TTA-ATGTATTTGTCAGATGGAAGTATCTT-TTCG-ATGTACGAAAAATA
gi|155231 : TGTAGCTCATTTTATA----TGC-ACCTAAAAACTGCTTCC----------T--CATTGTTTCA---------A---------------------ACTACT--------------------T----AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTGTCTGTCAGATGATAGTAACTT-TTAA-ATGTACGAAAAA
gi|155232 : agatAAATTTATCTCATTTCATAAAAATGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTT-T
gi|155233 : AAATATAGTTCATTTCATA----TAT-ACC-------------CCTTAGATT--T--C------A-----------A---------------------ACTAAT--------------------C----AAGAGAAA-GTAGTTCGTGA---TTG-TTT-ATGTATATGTCTGATG------ACTG-TTAA-ATATACAAAAAA
gi|155234 : ATTTAACT-GCTTCCTG----TTC-ATT------------------------T--C------A-----------A---------------------ACTACT--------------------C----AACAAAAT-GTAGTTCGTAA---CTT-TTC-AAGTATTTGTTGAAAGACAGTAACTTGTCCT-GTGTATGAAAACTA
gi|155235 : aaaattagtttattatatatgcaccAAATGTAGCTCATTATATA----TG---------------------------------------------------A---------------------A--GTT--------------------T----GGGAGAAA-GTAGTTATTCATGTTTT-TTT-AAG-ATTTGTCGGAC--AACTAACTT-TTCCTTTGTACGAAAAACA
gi|155236 : AATTGTAACTGGTTTCATA----TGC-ACC-------------CAAAAACTGCTT--C------TTCATTGTTTCAA---------------------ACTACT--------------------T----AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTATCTGTCAGATGATAGTAACTT-TTTA-ATGTACGAAAAA
gi|155237 : AATGTAGCTCATTATATA----TGC-ACTG------------C----------T--C------------------A---------------------ACTACTTCTTATCACTTCAAATTTCCC----AAGAGAAT-GTAGTTCCCAA---TTC-TTT-ATATATA-ATTGGGTGACA--AACTT-TTCATATGTTTGAAAAATA
gi|155238 : ATGTAGCTCATTTCATA----TGC-ACC-------------C----------C--T------T-----------A---------------------ACTACT--------------------G----AAGAGAAA-GTAGTTTTTTA---TTT-TTTCCTGTATCTGTCGAATGAAAATTGCTT-TTCA-ATGTAAGAAAAATA
gi|155239 : TATCTCATTTCATA----TGCTGCC-------------C----------T--C------T-----------A---------------------ACTACT--------------------C----AATAAAAA-GTAGTTTGTGAC--TTT-TTT-ATCTATCTGTCAGATAAAGGTAACTT-TTCA-ATGTACTAAGAATA
gi|155240 : GTTCATTTCATT----TGC-ACCAAAATACTG----C----------TTCC------TTATGGTTCCA-A---------------------ACTACT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTA-TTT-ATGTATCCGTCAGATTATAATAAC
gi|155241 : TCATTTCATA----TGC-ACC-------------G----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTTGTTT-ATGTA
gi|155242 : ATTTCATA----TGC-ACT-------------A----------T--C------T-----------A---------------------ACTACT--------------------C----AAGAGAAA-GTAGTTCTTGC---TTA-TTT-ATGTTTCTGTCAGATGATAGCAACTT-TTTA-ATGTACGAAAAA
gi|155243 : TA----TAC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCTGATGAAAGTAACTT-TTCA-AAGTACAAAAAATA
gi|155244 : ----------T--C------A-----------A---------------------ACTACT--------------------C----AAGAGAAA-GTCGTTCTTGAA--TTT-TTT-ATTTATCTGTTGGATGGAAGTAACTT-TTCA-GTGTACGAAAACTA
gi|155245 : ---TTG-TTC-ATGTATCTGTCGGATGAAAGTAATTT-TTCA-ATGTATGAAAAATA
Alignments
lowQualScore : 55555555555555555555555555555555555555555555555555555555555555555555 11111111111111111111
lowQualScore : 3 0 4444 2 55555555555555555555555555555555555555555555555555555555555555555555 55555555555555555555 4444 1 666 22 1 2 4
lowQualScore : . . .... . .................................................................... .................... .... . ... .. . . .
lowQualScore : 6 7 2222 0 11111111111111111111111111111111111111111111111111111111111111111111 55555555555555555555 0000 9 888 66 9 1 2
consensus : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
Reference ( family-767 ) : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155224 : AAATATAGCTCATTTCATA----TGC-ACC-------------C----------T--C------C-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGCTCTTGA---TTT-TTT-ATGTATCTGTCTGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155225 : AAATTTAGCTCATTTCATA----TTC-ACT-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-GTGTATCTGTAGGACGAAAGTAACTT-TTTA-ATGTACGAAAAATA
gi|155226 : AAATTTATCTAATTTCATA----TGC-ACC-------------C----------T--C------G-----------A---------------------ACTGCT--------------------C----AAGAAAAAAGTAGTTGTTGA---TTG-TTT-ATGTATCTGTCGCATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155227 : AAAT-TATCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTATTGA---TGT-GTT-GTGTATATGTCGGATGAAAGTAACTT-TTCA-ATGTATGAAAAA
gi|155228 : aAAATTTACATCATTTCATA----TGC-ACC-------------C----------T--C------T-----------T---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTT-TTG--------TTT-ATGTATCTGTCGGATGAAAATAACTG-TTCA-AAGTACGAAAAATA
gi|155229 : AAATC-ATCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------T---------------------ACTGCT--------------------CTTGAAAGAGAAA-GTAGTTTTTGA---TTT-T---GTGTATCTGTCGTATGAAAGTAACTT-TTCA-ATGTACGAAA
gi|155230 : aAAATTAAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------AGCTGCTTCCTAATCGTCTCAAACTACT--------------------T----AAGAGAAA-GTAGTGTTT-----TTT-TTA-ATGTATTTGTCAGATGGAAGTATCTT-TTCG-ATGTACGAAAAATA
gi|155231 : TGTAGCTCATTTTATA----TGC-ACCTAAAAACTGCTTCC----------T--CATTGTTTCA---------A---------------------ACTACT--------------------T----AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTGTCTGTCAGATGATAGTAACTT-TTAA-ATGTACGAAAAA
gi|155232 : agatAAATTTATCTCATTTCATAAAAATGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTT-T
gi|155233 : AAATATAGTTCATTTCATA----TAT-ACC-------------CCTTAGATT--T--C------A-----------A---------------------ACTAAT--------------------C----AAGAGAAA-GTAGTTCGTGA---TTG-TTT-ATGTATATGTCTGATG------ACTG-TTAA-ATATACAAAAAA
gi|155234 : ATTTAACT-GCTTCCTG----TTC-ATT------------------------T--C------A-----------A---------------------ACTACT--------------------C----AACAAAAT-GTAGTTCGTAA---CTT-TTC-AAGTATTTGTTGAAAGACAGTAACTTGTCCT-GTGTATGAAAACTA
gi|155235 : aaaattagtttattatatatgcaccAAATGTAGCTCATTATATA----TG---------------------------------------------------A---------------------A--GTT--------------------T----GGGAGAAA-GTAGTTATTCATGTTTT-TTT-AAG-ATTTGTCGGAC--AACTAACTT-TTCCTTTGTACGAAAAACA
gi|155236 : AATTGTAACTGGTTTCATA----TGC-ACC-------------CAAAAACTGCTT--C------TTCATTGTTTCAA---------------------ACTACT--------------------T----AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTATCTGTCAGATGATAGTAACTT-TTTA-ATGTACGAAAAA
gi|155237 : AATGTAGCTCATTATATA----TGC-ACTG------------C----------T--C------------------A---------------------ACTACTTCTTATCACTTCAAATTTCCC----AAGAGAAT-GTAGTTCCCAA---TTC-TTT-ATATATA-ATTGGGTGACA--AACTT-TTCATATGTTTGAAAAATA
gi|155238 : ATGTAGCTCATTTCATA----TGC-ACC-------------C----------C--T------T-----------A---------------------ACTACT--------------------G----AAGAGAAA-GTAGTTTTTTA---TTT-TTTCCTGTATCTGTCGAATGAAAATTGCTT-TTCA-ATGTAAGAAAAATA
gi|155239 : TATCTCATTTCATA----TGCTGCC-------------C----------T--C------T-----------A---------------------ACTACT--------------------C----AATAAAAA-GTAGTTTGTGAC--TTT-TTT-ATCTATCTGTCAGATAAAGGTAACTT-TTCA-ATGTACTAAGAATA
gi|155240 : GTTCATTTCATT----TGC-ACCAAAATACTG----C----------TTCC------TTATGGTTCCA-A---------------------ACTACT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTA-TTT-ATGTATCCGTCAGATTATAATAAC
gi|155241 : TCATTTCATA----TGC-ACC-------------G----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTTGTTT-ATGTA
gi|155242 : ATTTCATA----TGC-ACT-------------A----------T--C------T-----------A---------------------ACTACT--------------------C----AAGAGAAA-GTAGTTCTTGC---TTA-TTT-ATGTTTCTGTCAGATGATAGCAACTT-TTTA-ATGTACGAAAAA
gi|155243 : TA----TAC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCTGATGAAAGTAACTT-TTCA-AAGTACAAAAAATA
gi|155244 : ----------T--C------A-----------A---------------------ACTACT--------------------C----AAGAGAAA-GTCGTTCTTGAA--TTT-TTT-ATTTATCTGTTGGATGGAAGTAACTT-TTCA-GTGTACGAAAACTA
gi|155245 : ---TTG-TTC-ATGTATCTGTCGGATGAAAGTAATTT-TTCA-ATGTATGAAAAATA
blockSeqs : T AAAA T CTCTAGCTGCTTCCTAATCGTCTCAA TCTTATCACTTCAAATTTCC TTGA A TGT TG C G T
blockSeqs : T . . TAAAAACTGCTTCCTCATTGTTTCAA . . . C T . . T
blockSeqs : T . . CAAAAACTGCTTCTTCATTGTTTCAA . . . A G . . .
blockSeqs : C . . AAAATACTGCTTCCTTATGGTTCCAA . . . . T . . .
blockSeqs : T . . CCTTAGATTTCAA . . . . T . . .
blockSeqs : G . . CTCTA . . . . T . . .
blockSeqs : T . . CTCGA . . . . A . . .
blockSeqs : A . . CTCTA . . . . T . . .
blockSeqs : T . . CTCTT . . . . G . . .
blockSeqs : G . . CTCTT . . . . T . . .
blockSeqs : G . . CTCTA . . . . T . . .
blockSeqs : G . . GCTCA . . . . A . . .
blockSeqs : G . . CCTTA . . . . C . . .
blockSeqs : . . . CTCTA . . . . T . . .
blockSeqs : . . GTCTA . . . . T . . .
blockSeqs : . . ATCTA . . . . A . . .
blockSeqs : . . CTCTA . . . . A . . .
blockSeqs : . . TCAA . . . . T . . .
blockSeqs : . . A . . . . T .
blockSeqs : . . . . G .
blockSeqs : . .
blockSeqCons :
originalCons : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
finalCons : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
Alignments
lowQualScore : 55555555555555555555555555555555555555555555555555555555555555555555 11111111111111111111
lowQualScore : 3 0 4444 2 55555555555555555555555555555555555555555555555555555555555555555555 55555555555555555555 4444 1 666 22 1 2 4
lowQualScore : . . .... . .................................................................... .................... .... . ... .. . . .
lowQualScore : 6 7 2222 0 11111111111111111111111111111111111111111111111111111111111111111111 55555555555555555555 0000 9 888 66 9 1 2
consensus : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
Reference ( family-767 ) : AAATNTAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCGGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155224 : AAATATAGCTCATTTCATA----TGC-ACC-------------C----------T--C------C-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGCTCTTGA---TTT-TTT-ATGTATCTGTCTGATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155225 : AAATTTAGCTCATTTCATA----TTC-ACT-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-GTGTATCTGTAGGACGAAAGTAACTT-TTTA-ATGTACGAAAAATA
gi|155226 : AAATTTATCTAATTTCATA----TGC-ACC-------------C----------T--C------G-----------A---------------------ACTGCT--------------------C----AAGAAAAAAGTAGTTGTTGA---TTG-TTT-ATGTATCTGTCGCATGAAAGTAACTT-TTCA-ATGTACGAAAAATA
gi|155227 : AAAT-TATCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTATTGA---TGT-GTT-GTGTATATGTCGGATGAAAGTAACTT-TTCA-ATGTATGAAAAA
gi|155228 : aAAATTTACATCATTTCATA----TGC-ACC-------------C----------T--C------T-----------T---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTT-TTG--------TTT-ATGTATCTGTCGGATGAAAATAACTG-TTCA-AAGTACGAAAAATA
gi|155229 : AAATC-ATCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------T---------------------ACTGCT--------------------CTTGAAAGAGAAA-GTAGTTTTTGA---TTT-T---GTGTATCTGTCGTATGAAAGTAACTT-TTCA-ATGTACGAAA
gi|155230 : aAAATTAAGCTCATTTCATA----TGC-ACC-------------C----------T--C------T-----------AGCTGCTTCCTAATCGTCTCAAACTACT--------------------T----AAGAGAAA-GTAGTGTTT-----TTT-TTA-ATGTATTTGTCAGATGGAAGTATCTT-TTCG-ATGTACGAAAAATA
gi|155231 : TGTAGCTCATTTTATA----TGC-ACCTAAAAACTGCTTCC----------T--CATTGTTTCA---------A---------------------ACTACT--------------------T----AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTGTCTGTCAGATGATAGTAACTT-TTAA-ATGTACGAAAAA
gi|155232 : agatAAATTTATCTCATTTCATAAAAATGC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTT-T
gi|155233 : AAATATAGTTCATTTCATA----TAT-ACC-------------CCTTAGATT--T--C------A-----------A---------------------ACTAAT--------------------C----AAGAGAAA-GTAGTTCGTGA---TTG-TTT-ATGTATATGTCTGATG------ACTG-TTAA-ATATACAAAAAA
gi|155234 : ATTTAACT-GCTTCCTG----TTC-ATT------------------------T--C------A-----------A---------------------ACTACT--------------------C----AACAAAAT-GTAGTTCGTAA---CTT-TTC-AAGTATTTGTTGAAAGACAGTAACTTGTCCT-GTGTATGAAAACTA
gi|155235 : aaaattagtttattatatatgcaccAAATGTAGCTCATTATATA----TG---------------------------------------------------A---------------------A--GTT--------------------T----GGGAGAAA-GTAGTTATTCATGTTTT-TTT-AAG-ATTTGTCGGAC--AACTAACTT-TTCCTTTGTACGAAAAACA
gi|155236 : AATTGTAACTGGTTTCATA----TGC-ACC-------------CAAAAACTGCTT--C------TTCATTGTTTCAA---------------------ACTACT--------------------T----AAGAGAAA-GTAGTTCTTGA---TTA-TTT-GTGTATCTGTCAGATGATAGTAACTT-TTTA-ATGTACGAAAAA
gi|155237 : AATGTAGCTCATTATATA----TGC-ACTG------------C----------T--C------------------A---------------------ACTACTTCTTATCACTTCAAATTTCCC----AAGAGAAT-GTAGTTCCCAA---TTC-TTT-ATATATA-ATTGGGTGACA--AACTT-TTCATATGTTTGAAAAATA
gi|155238 : ATGTAGCTCATTTCATA----TGC-ACC-------------C----------C--T------T-----------A---------------------ACTACT--------------------G----AAGAGAAA-GTAGTTTTTTA---TTT-TTTCCTGTATCTGTCGAATGAAAATTGCTT-TTCA-ATGTAAGAAAAATA
gi|155239 : TATCTCATTTCATA----TGCTGCC-------------C----------T--C------T-----------A---------------------ACTACT--------------------C----AATAAAAA-GTAGTTTGTGAC--TTT-TTT-ATCTATCTGTCAGATAAAGGTAACTT-TTCA-ATGTACTAAGAATA
gi|155240 : GTTCATTTCATT----TGC-ACCAAAATACTG----C----------TTCC------TTATGGTTCCA-A---------------------ACTACT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTA-TTT-ATGTATCCGTCAGATTATAATAAC
gi|155241 : TCATTTCATA----TGC-ACC-------------G----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAAAAA-GTAGTTCTTGA---TTTGTTT-ATGTA
gi|155242 : ATTTCATA----TGC-ACT-------------A----------T--C------T-----------A---------------------ACTACT--------------------C----AAGAGAAA-GTAGTTCTTGC---TTA-TTT-ATGTTTCTGTCAGATGATAGCAACTT-TTTA-ATGTACGAAAAA
gi|155243 : TA----TAC-ACC-------------C----------T--C------T-----------A---------------------ACTGCT--------------------C----AAGAGAAA-GTAGTTCTTGA---TTT-TTT-ATGTATCTGTCTGATGAAAGTAACTT-TTCA-AAGTACAAAAAATA
gi|155244 : ----------T--C------A-----------A---------------------ACTACT--------------------C----AAGAGAAA-GTCGTTCTTGAA--TTT-TTT-ATTTATCTGTTGGATGGAAGTAACTT-TTCA-GTGTACGAAAACTA
gi|155245 : ---TTG-TTC-ATGTATCTGTCGGATGAAAGTAATTT-TTCA-ATGTATGAAAAATA