lowQualScore : 1 111 111111 111
lowQualScore : 7 555 555 555 33 1 2 5555 33 4 777777 33 5555 111 888888 0 66 66666 444 7 8888888 6 33 2 777777 000 444 777 2 0 0 00 1 11 44 1
lowQualScore : . ... ... ... .. . . .... .. . ...... .. .... ... ...... . .. ..... ... . ....... . .. . ...... ... ... ... . . . .. . .. .. .
lowQualScore : 4 444 000 000 99 3 7 7777 77 1 777777 77 7777 333 777777 7 88 77777 777 9 8888888 5 99 9 888888 444 999 555 5 5 8 88 5 22 22 5
consensus : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT----GG-NTATTTTGNGA---GCCATTTACAGGACA-----AAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCAC--AAAAT--ATATAAACAGCAATCGGAAT--ACTTTT-CATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
Reference ( gi|155732 ) : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT----GA-TTATTTTGAGA---GCCATTTCCAGGACA-----AAAA---TGATACGATACTACGCAACAACTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCAA--AAAAT--GTATAAACAGCAATCGGAAC--ACTTTT-CATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155734 : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATG----TATTTT--CTACTCTCGCAAG------ATGGA--CAT----GG-TTATTTTGAGA---GCCATTTCCAGGACA-----AAAA---TGATACGATACTAAGCAACAAGTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCAA--AAAATAAATATAAACAGCAATCGGAAT--ACTTTT-CATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAAGA--------GCTGA--GCAATGACTTTGTCGTCTGGTT
gi|155733 : CATACAATT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTTTTCTGCTCTCGCAAT------ATGGA--CAT----GG-TTATTTTGAGA---GCCATTACCAAGACA-----AAAA---CGATACGATACTACGCAACAATTATCTATACACG-----TATATTTACCTTTG--AT-ATCACCAGCGAACTGTTGAAAACGCAC--AAAAT--ATATAAACAGCAATCGGAAT--ACTTTT-CATTTTACCCGCAATTACTTTGATCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTTTCGTCTGGTT
gi|155735 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAA------ATTGA--CAT----GG-GTATTTTGCGA---GAAATTTACAGGACA-----AAAA---TGATACGATACTACGTAATAGTTATCTATACAC-------------ACCTTTG--AT-AACACCAGCGAACTGTTGAAAACACAC--AAAAT--ATATAAACAGCAATCGGAAT--TCTTTT-CATTTTACCCGCAATTACTTTGAC----------CGAAACATATTCACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155736 : CATACA-TT---GCAAACATCA---A---A--CCGTTGT-TCATT----TATGTT--CTGCTTTCGCAAG------ATGGA--CAT----GG-GTATTTTGCGA---GCCATTTACATGAC------AAAA---TGATACGATACTACGCAATAATTATCTATACACG-----CATATATACCTTTG--AT-TACACTAACGAACTGATAAAAACAC----ACAAT--ATATAAACAGCAATAGGAAT--ACTTTT-CA-TTTACCTGCAATTACTTTGACCGAAACTTAACGAAACATATTTACTGCTGA--GCAATGCCTTTGTCGTCTGATT
gi|155738 : CATACA-TT---GTAAACATCATTTATTCATTCATTCAT-TCATTCAATTATTTT--CTACTCTCGCAAG------ATGGA--CAT----GG-TTATTTTGAGA---GCCATTCACACGAAA-----AAAA---TGATACGATACCACGCAACAATTATCTATACACG-----TATATTTACCTTTGCAATGAAAACGAGCGAACTGTTGAAAACGTAC--AGAAT--ATAT-----GTGACCAGGGCTTGCTTTT--ATTTTA
gi|155737 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TAATT----TATTTT--C------------------AT-----CAT----GA-TTGTTTTGAAATGCACCAGTTCT-TGACATCGCTAGAG---TGATAC
gi|155739 : ATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATCGG--CAT----GG-GTATTTTGCGA---GGCGTTGACAGGACA-----AGAA---TGATACAATACTACAAAACAATTATCCATACACA-----CATACATACCTTTG--A-----------TAACTGTTGAAAACGCGC--AAAAT--G--TAAACAGCAATCGGAAT--ACCTTT-CATTT
gi|155740 : TACAATT---GTAAACATCA---A---A--CAGTTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT----GG-TTATTTTGAGA---GCCATTTCCAGGACA-----AAAA---TGATACGATACTAAGCAACAATTATCTATACACG-----TATATTTACCTTTG--AA-AACACCAGCGAACTGTTGAAAACGCAA--AAAA---ATATAAACAGCAATCGGAAT--ACTTTT-CATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGAC--TG--GTTTGGT
gi|155741 : TACAATT---GTAAACAT-A---A---A--CAATTGT-TAATT----TATTTT--CTGTTCTCGCAAG------ATGGA--CAA----AG-TTATTTTG--------------CAGGACA-----AAAAAAATAATACGATACAACGCAACAATTATATATACACG-----TATATCTACCTTTG--AT-ATCCCAAGCGAACTGTTGAAAACGCAC--ACAAT--ATATAAACAGCAATAGGAAT--ACTTTT-TAATTTACTTGCAAATACTTTGACTGAAAATTTGCGAAACATATTTACTGAAGA--GCAATGGTTTTGTCGTCTGGTT
gi|155742 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTTT--CTTCTCTCGCAAGCAGGGCATGGA--TATTTACGAGCTATTTTGCGC---GCCA-TTACAGGACA-----AAAA---TGATACAATACTACACA---------TATA---------------TACCCTTG--AT-AACA----CTAAAAGTTGAAA
gi|155743 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTAT--CTTCTTT-----G------ATATT--TAC----GAGCCATTTTGCGT---GCCATTTACAGGACA-----AAAA---TGTTACAATACTACACA---------TATA---------------TACCCTTG--AT-AACA----TTAAAAGTTGAAA
gi|155744 : AATTCAGGTCAACATCA---A---A--CAATTGT-TCATT----TATTTT--CAACTCTCGCAAG------ATGGA--CAT----GG-TTATTTTGAGA---GCCATTTCTAGGACA-----CAAA---TGATACGATACTACGCAACAATTATATATACAAC-----TATATTTACCTTTG--A-----------TAACTGTTGGAAACGCAA--AAAAT--ATATAAACAGCAATCGGAAT--AGTTTT-CATTTTACCCGCAATTGCTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAGTGATTTT-CCGTCTGGTT
gi|155745 : ATT---GTCAACATCA---A---A--CCATTGT-TCATT----AATTTT--CTGCTCTCGCAAG------ATGGGGTCAT----GG-ATATTTTGCGA---GCCATTTACAGGACA-----AAAA---TGATACAATACTACAAAATGATTGTCCACACAC
gi|155746 : CATCA---T---A--CAAT-GTATGATT----TACATT--CTGCTCTCGCAAG------ATGGG--CAT----GG-ATATTTTGA-------------CAGGACC-----AGAA---TTATACTATACTACATAACACTTATCTATACACA-----CATATATACCTTTG--AT-AACA----CTAACTGTTGTAAACGCAC--AAAAT--G--TAAACAGCTATCGGAAT--ACTTTT-CA----------------TTTGACCGAAACTTTGCGAAACATAATTACTGCATA--GCAAGGACTGTTTCGTTTGGTT
gi|155747 : ATAGT-TCATT----TATTTT--CTGCTCTCACAAG------CTTGA--TAT----GG-ATATTTTG-----------------GACA-----AAAA---T-ATACACTTCTACACAATAATTATCTACACAGG-----CATACATACCTTTA--AT-AA---CAG-TACTTGTTGAAA---CAATCAATAT--TTATA
gi|155748 : TATATATATATGAAATATATATATACCTTTG--AT-AACAC----TAACTGTTGAAAACGCGC--AAAAT--GTC--AACAGCAATCGATAT--TATTTT-CATTTTACCCGCAATTATTTTGACCGAAACTTTGCGAAACATATTTACTGCATA--GCAAGGACTTTGTCGTCTTGTT
gi|155750 : AACGCGC--AAAAT--GTA--AACAGCAATTTGAAT--ATTTTTTCATTTTACCCGCAA
gi|155751 : CGCAA--AAAAA--GTGCAAACA---ATCGGAAC--ACTTTT-CATTTTACCCGCA-----------------------AAACATATTTACTGCATA--TTAAGCACATTCTCGTCCGATT
gi|155752 : AT--ATATAAACAGCAATCGGAAT--ACTTTT-CATTTTACCGGCAAATACTTTG----------------ACATATTTACTGCAGA--ACAATGACTTTGTCGTCTAGTT
gi|155749 : AACCAGAAATCGGATT--ACTTTT-CGTTTTACCCG-----------------------CGAAACATATTTCCTGCATA--TTAAGCACTTTCTCGTCCGGT
gi|155753 : aacacacaa-CATTTTACCTGCAATTATTCTGACCGTTAATTTTCGAAACATATTTACCGCATATTACGCT--CTTTGTTGTCTGGTT
Alignments
lowQualScore : 1 1111
lowQualScore : 5 555 444 444 33 0 2 5555 33 777777 33 66666 2 1 8 22 444 777777 1 33 2 2222 0 33 33 33 2 0 0 33 0
lowQualScore : . ... ... ... .. . . .... .. ...... .. ..... . . . .. ... ...... . .. . .... . .. .. .. . . . .. .
lowQualScore : 5 000 777 777 77 6 5 3333 44 777777 77 77777 7 0 8 33 777 111111 9 77 7 7777 6 44 22 22 5 1 7 99 7
consensus : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
Reference ( family-761 ) : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155732 : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-ATTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTACGCAACAACTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--AAAAAT--GTA--TAAACAGCAATCGGAACA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155733 : CATACAATT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTTTTCTGCTCTCGCAAT------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTACCAAGACAAAAA---CGATACGATACTACGCAACAATTATCTATACACG-----TATATTTACCTTTG--AT-ATCACCAGCGAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGATCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTTTCGTCTGGTT
gi|155734 : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATG----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTAAGCAACAAGTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--AAAAATAAATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAAGA--------GCTGA--GCAATGACTTTGTCGTCTGGTT
gi|155735 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAA------ATTGA--CAT-----G-GGTATTTTGCGAGAAATTTACAGGACAAAAA---TGATACGATACTACGTAATAGTTATCTATACAC-------------ACCTTTG--AT-AACACCAGCGAACTGTTGAAAACACA--CAAAAT--ATA--TAAACAGCAATCGGAATT-CTTTTCATTTTACCCGCAATTACTTTGAC----------CGAAACATATTCACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155736 : CATACA-TT---GCAAACATCA---A---A--CCGTTGT-TCATT----TATGTT--CTGCTTTCGCAAG------ATGGA--CAT-----G-GGTATTTTGCGAGCCATTTACATGAC-AAAA---TGATACGATACTACGCAATAATTATCTATACACG-----CATATATACCTTTG--AT-TACACTAACGAACTGATAAAAACACA--C--AAT--ATA--TAAACAGCAATAGGAATA-CTTTTCA-TTTACCTGCAATTACTTTGACCGAAACTTAACGAAACATATTTACTGCTGA--GCAATGCCTTTGTCGTCTGATT
gi|155737 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TAATT----TATTTT--C
gi|155738 : CATACA-TT---GTAAACATCATTTATTCATTCATTCAT-TCATTCAATTATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTCACACGAAAAAAA---TGATACGATACCACGCAACAATTATCTATACACG-----TATATTTACCTTTGCAATGAAAACGAGCGAACTGTTGAAAACGTA--CAGAAT--ATATGTGACCAG-----GGCTTG-CTTTT-ATTTTAatcatgattgttttgaaatgcaccagttcttgacatcgctagagtgatac
gi|155739 : ATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATCGG--CAT-----G-GGTATTTTGCGAGGCGTTGACAGGACAAGAA---TGATACAATACTACAAAACAATTATCCATACACA-----CATACATACCTTTG--A-----------TAACTGTTGAAAACGCG--CAAA----ATG--TAAACAGCAATCGGAATA-CCTTTCATTT
gi|155740 : TACAATT---GTAAACATCA---A---A--CAGTTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTAAGCAACAATTATCTATACACG-----TATATTTACCTTTG--AA-AACACCAGCGAACTGTTGAAAACGCA--AAAAA---ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGAC--TG--GTTTGGT
gi|155741 : TACAATT---GTAAACAT-A---A---A--CAATTGT-TAATT----TATTTT--CTGTTCTCGCAAG------ATGGA--CAA-----A-GTTATTTTG-----------CAGGACAAAAAAAATAATACGATACAACGCAACAATTATATATACACG-----TATATCTACCTTTG--AT-ATCCCAAGCGAACTGTTGAAAACGCA--CACAAT--ATA--TAAACAGCAATAGGAATA-CTTTTTAATTTACTTGCAAATACTTTGACTGAAAATTTGCGAAACATATTTACTGAAGA--GCAATGGTTTTGTCGTCTGGTT
gi|155742 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTTT--CTTCTCTCGCAAGCAGGGCATGGA--TATTTACGA-GCTATTTTGCGCGCCA-TTACAGGACAAAAA---TGATACAATACTACAC------------------------ATATATACCCTTG--AT-AACA----CTAAAAGTTGAAA
gi|155743 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTAT--CTTCTTT-----G------ATATT--TAC-----GAGCCATTTTGCGTGCCATTTACAGGACAAAAA---TGTTACAATACTACAC------------------------ATATATACCCTTG--AT-AACA----TTAAAAGTTGAAA
gi|155744 : AATTCAGGTCAACATCA---A---A--CAATTGT-TCATT----TATTTT--CAACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCTAGGACACAAA---TGATACGATACTACGCAACAATTATATATACAAC-----TATATTTACCTTTG--A-----------TAACTGTTGGAAACGCA--AAAAAT--ATA--TAAACAGCAATCGGAATA-GTTTTCATTTTACCCGCAATTGCTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAGTGATTTT-CCGTCTGGTT
gi|155745 : ATT---GTCAACATCA---A---A--CCATTGT-TCATT----AATTTT--CTGCTCTCGCAAG------ATGGGGTCAT-----G-GATATTTTGCGAGCCATTTACAGGACAAAAA---TGATACAATACTACAAAATGATTGTCCACACAC
gi|155746 : CATCA---T---A--CAAT-GTATGATT----TACATT--CTGCTCTCGCAAG------ATGGG--CAT-----G-GATATTTTG----------ACAGGACCAGAA---TTATACTATACTACATAACACTTATCTATACACA-----CATATATACCTTTG--AT-AACA----CTAACTGTTGTAAACGCA--CAAA----ATG--TAAACAGCTATCGGAATA-CTTTTCA----------------TTTGACCGAAACTTTGCGAAACATAATTACTGCATA--GCAAGGACTGTTTCGTTTGGTT
gi|155747 : ATAGT-TCATT----TATTTT--CTGCTCTCACAAG------CTTGA--TAT-----G-GATATTTTG--------------GACAAAAA---T-ATACACTTCTACACAATAATTATCTACACAGG-----CATACATACCTTTA--AT-AA---CAG-TACTTGTTGAAA---CAATCAATAT--TTA--TA
gi|155748 : TATATATATATGAAATATATATATACCTTTG--AT-AACAC----TAACTGTTGAAAACGCG--CAAAAT--GTC----AACAGCAATCGATATT-ATTTTCATTTTACCCGCAATTATTTTGACCGAAACTTTGCGAAACATATTTACTGCATA--GCAAGGACTTTGTCGTCTTGTT
gi|155749 : AACACA--CAAAAC-----------CAGAAATCGGATTA-CTTTTCGTTTTACCC-----------------------GCGAAACATATTTCCTGCATA--TTAAGCACTTTCTCGTCCGGT
gi|155750 : AACGCG--CAAAAT--GTA----AACAGCAATTTGAATATTTTTTCATTTTACCCGCAA
gi|155751 : CGCA--AAAAAA--GTG--CAAACA---ATCGGAACA-CTTTTCATTTTACCCGCA-----------------------AAACATATTTACTGCATA--TTAAGCACATTCTCGTCCGATT
gi|155752 : AT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCGGCAAATACTTTG----------------ACATATTTACTGCAGA--ACAATGACTTTGTCGTCTAGTT
gi|155753 : CATTTTACCTGCAATTATTCTGACCGTTAATTTTCGAAACATATTTACCGCATATTACGCT--CTTTGTTGTCTGGTT
Alignments
lowQualScore : 1 1111
lowQualScore : 5 555 444 444 33 0 2 5555 33 777777 33 66666 2 1 8 22 444 777777 1 33 2 2222 0 33 33 33 2 0 0 33 0
lowQualScore : . ... ... ... .. . . .... .. ...... .. ..... . . . .. ... ...... . .. . .... . .. .. .. . . . .. .
lowQualScore : 5 000 777 777 77 6 5 3333 44 777777 77 77777 7 0 8 33 777 111111 9 77 7 7777 6 44 22 22 5 1 7 99 7
consensus : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
Reference ( family-761 ) : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155732 : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-ATTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTACGCAACAACTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--AAAAAT--GTA--TAAACAGCAATCGGAACA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155733 : CATACAATT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTTTTCTGCTCTCGCAAT------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTACCAAGACAAAAA---CGATACGATACTACGCAACAATTATCTATACACG-----TATATTTACCTTTG--AT-ATCACCAGCGAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGATCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTTTCGTCTGGTT
gi|155734 : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATG----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTAAGCAACAAGTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--AAAAATAAATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAAGA--------GCTGA--GCAATGACTTTGTCGTCTGGTT
gi|155735 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAA------ATTGA--CAT-----G-GGTATTTTGCGAGAAATTTACAGGACAAAAA---TGATACGATACTACGTAATAGTTATCTATACAC-------------ACCTTTG--AT-AACACCAGCGAACTGTTGAAAACACA--CAAAAT--ATA--TAAACAGCAATCGGAATT-CTTTTCATTTTACCCGCAATTACTTTGAC----------CGAAACATATTCACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155736 : CATACA-TT---GCAAACATCA---A---A--CCGTTGT-TCATT----TATGTT--CTGCTTTCGCAAG------ATGGA--CAT-----G-GGTATTTTGCGAGCCATTTACATGAC-AAAA---TGATACGATACTACGCAATAATTATCTATACACG-----CATATATACCTTTG--AT-TACACTAACGAACTGATAAAAACACA--C--AAT--ATA--TAAACAGCAATAGGAATA-CTTTTCA-TTTACCTGCAATTACTTTGACCGAAACTTAACGAAACATATTTACTGCTGA--GCAATGCCTTTGTCGTCTGATT
gi|155737 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TAATT----TATTTT--C
gi|155738 : CATACA-TT---GTAAACATCATTTATTCATTCATTCAT-TCATTCAATTATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTCACACGAAAAAAA---TGATACGATACCACGCAACAATTATCTATACACG-----TATATTTACCTTTGCAATGAAAACGAGCGAACTGTTGAAAACGTA--CAGAAT--ATATGTGACCAG-----GGCTTG-CTTTT-ATTTTAatcatgattgttttgaaatgcaccagttcttgacatcgctagagtgatac
gi|155739 : ATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATCGG--CAT-----G-GGTATTTTGCGAGGCGTTGACAGGACAAGAA---TGATACAATACTACAAAACAATTATCCATACACA-----CATACATACCTTTG--A-----------TAACTGTTGAAAACGCG--CAAA----ATG--TAAACAGCAATCGGAATA-CCTTTCATTT
gi|155740 : TACAATT---GTAAACATCA---A---A--CAGTTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTAAGCAACAATTATCTATACACG-----TATATTTACCTTTG--AA-AACACCAGCGAACTGTTGAAAACGCA--AAAAA---ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGAC--TG--GTTTGGT
gi|155741 : TACAATT---GTAAACAT-A---A---A--CAATTGT-TAATT----TATTTT--CTGTTCTCGCAAG------ATGGA--CAA-----A-GTTATTTTG-----------CAGGACAAAAAAAATAATACGATACAACGCAACAATTATATATACACG-----TATATCTACCTTTG--AT-ATCCCAAGCGAACTGTTGAAAACGCA--CACAAT--ATA--TAAACAGCAATAGGAATA-CTTTTTAATTTACTTGCAAATACTTTGACTGAAAATTTGCGAAACATATTTACTGAAGA--GCAATGGTTTTGTCGTCTGGTT
gi|155742 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTTT--CTTCTCTCGCAAGCAGGGCATGGA--TATTTACGA-GCTATTTTGCGCGCCA-TTACAGGACAAAAA---TGATACAATACTACAC------------------------ATATATACCCTTG--AT-AACA----CTAAAAGTTGAAA
gi|155743 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTAT--CTTCTTT-----G------ATATT--TAC-----GAGCCATTTTGCGTGCCATTTACAGGACAAAAA---TGTTACAATACTACAC------------------------ATATATACCCTTG--AT-AACA----TTAAAAGTTGAAA
gi|155744 : AATTCAGGTCAACATCA---A---A--CAATTGT-TCATT----TATTTT--CAACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCTAGGACACAAA---TGATACGATACTACGCAACAATTATATATACAAC-----TATATTTACCTTTG--A-----------TAACTGTTGGAAACGCA--AAAAAT--ATA--TAAACAGCAATCGGAATA-GTTTTCATTTTACCCGCAATTGCTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAGTGATTTT-CCGTCTGGTT
gi|155745 : ATT---GTCAACATCA---A---A--CCATTGT-TCATT----AATTTT--CTGCTCTCGCAAG------ATGGGGTCAT-----G-GATATTTTGCGAGCCATTTACAGGACAAAAA---TGATACAATACTACAAAATGATTGTCCACACAC
gi|155746 : CATCA---T---A--CAAT-GTATGATT----TACATT--CTGCTCTCGCAAG------ATGGG--CAT-----G-GATATTTTG----------ACAGGACCAGAA---TTATACTATACTACATAACACTTATCTATACACA-----CATATATACCTTTG--AT-AACA----CTAACTGTTGTAAACGCA--CAAA----ATG--TAAACAGCTATCGGAATA-CTTTTCA----------------TTTGACCGAAACTTTGCGAAACATAATTACTGCATA--GCAAGGACTGTTTCGTTTGGTT
gi|155747 : ATAGT-TCATT----TATTTT--CTGCTCTCACAAG------CTTGA--TAT-----G-GATATTTTG--------------GACAAAAA---T-ATACACTTCTACACAATAATTATCTACACAGG-----CATACATACCTTTA--AT-AA---CAG-TACTTGTTGAAA---CAATCAATAT--TTA--TA
gi|155748 : TATATATATATGAAATATATATATACCTTTG--AT-AACAC----TAACTGTTGAAAACGCG--CAAAAT--GTC----AACAGCAATCGATATT-ATTTTCATTTTACCCGCAATTATTTTGACCGAAACTTTGCGAAACATATTTACTGCATA--GCAAGGACTTTGTCGTCTTGTT
gi|155749 : AACACA--CAAAAC-----------CAGAAATCGGATTA-CTTTTCGTTTTACCC-----------------------GCGAAACATATTTCCTGCATA--TTAAGCACTTTCTCGTCCGGT
gi|155750 : AACGCG--CAAAAT--GTA----AACAGCAATTTGAATATTTTTTCATTTTACCCGCAA
gi|155751 : CGCA--AAAAAA--GTG--CAAACA---ATCGGAACA-CTTTTCATTTTACCCGCA-----------------------AAACATATTTACTGCATA--TTAAGCACATTCTCGTCCGATT
gi|155752 : AT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCGGCAAATACTTTG----------------ACATATTTACTGCAGA--ACAATGACTTTGTCGTCTAGTT
gi|155753 : CATTTTACCTGCAATTATTCTGACCGTTAATTTTCGAAACATATTTACCGCATATTACGCT--CTTTGTTGTCTGGTT
blockSeqs : A CAG TTT TTC TT A CAAT TT CAGGGC GT TTACG A T A AC AAA GAAATA T CA G CCAG AT AA TG T TT
blockSeqs : A . . . . . . . . . . . T A TC . G T . . CCAG . . . . .
blockSeqs : A . . . . . . . . . . . G C TA . G A . . CCAG . . . . .
blockSeqs : A . . . . . . . . . . . G C TA . G T . . CTAA . . . . .
blockSeqs : A . . . . . . . . . . . T A CA . G A . . CGAG . . . . .
blockSeqs : A . . . . . . . . . . . G C GA . A T . . CCAG . . . . .
blockSeqs : . . . . . . . . . . . . T A TC . G C . . CAAG . . . . .
blockSeqs : . . . . . . . . . . . . T C TA . G A . . CAG . . . . .
blockSeqs : . . . . . . . . . . . . C C TA . C A . . C . . . . .
blockSeqs : . . . . . . . . . . . . C A TC . A T . . . . . . . .
blockSeqs : . . . . . . . . . . . . T C TA . G A . . . . . . . .
blockSeqs : . . . . . . . . . . . . A . A . . A . . . . . . . .
blockSeqs : . . . . . . . . . . . . A . . . . A . . . . . . . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . .
blockSeqs : . .
blockSeqCons :
originalCons : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
finalCons : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
Alignments
lowQualScore : 1 1111
lowQualScore : 5 555 444 444 33 0 2 5555 33 777777 33 66666 2 1 8 22 444 777777 1 33 2 2222 0 33 33 33 2 0 0 33 0
lowQualScore : . ... ... ... .. . . .... .. ...... .. ..... . . . .. ... ...... . .. . .... . .. .. .. . . . .. .
lowQualScore : 5 000 777 777 77 6 5 3333 44 777777 77 77777 7 0 8 33 777 111111 9 77 7 7777 6 44 22 22 5 1 7 99 7
consensus : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
Reference ( family-761 ) : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATGGA--CAT-----G-GNTATTTTGNGAGCCATTTACAGGACAAAAA---TGATACGATACTACGCAACAATTATCTATACACG-----TATATNTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155732 : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-ATTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTACGCAACAACTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--AAAAAT--GTA--TAAACAGCAATCGGAACA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155733 : CATACAATT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTTTTCTGCTCTCGCAAT------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTACCAAGACAAAAA---CGATACGATACTACGCAACAATTATCTATACACG-----TATATTTACCTTTG--AT-ATCACCAGCGAACTGTTGAAAACGCA--CAAAAT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGATCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGACTTTTTCGTCTGGTT
gi|155734 : CATACAATT---GTAAACATCA---A---A--CAATTGT-TCATG----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTAAGCAACAAGTATCTATACACG-----TATATTTACCTTTG--AT-AACACCAGCTAACTGTTGAAAACGCA--AAAAATAAATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAAGA--------GCTGA--GCAATGACTTTGTCGTCTGGTT
gi|155735 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAA------ATTGA--CAT-----G-GGTATTTTGCGAGAAATTTACAGGACAAAAA---TGATACGATACTACGTAATAGTTATCTATACAC-------------ACCTTTG--AT-AACACCAGCGAACTGTTGAAAACACA--CAAAAT--ATA--TAAACAGCAATCGGAATT-CTTTTCATTTTACCCGCAATTACTTTGAC----------CGAAACATATTCACTGCAGA--GCAATGACTTTGTCGTCTGGTT
gi|155736 : CATACA-TT---GCAAACATCA---A---A--CCGTTGT-TCATT----TATGTT--CTGCTTTCGCAAG------ATGGA--CAT-----G-GGTATTTTGCGAGCCATTTACATGAC-AAAA---TGATACGATACTACGCAATAATTATCTATACACG-----CATATATACCTTTG--AT-TACACTAACGAACTGATAAAAACACA--C--AAT--ATA--TAAACAGCAATAGGAATA-CTTTTCA-TTTACCTGCAATTACTTTGACCGAAACTTAACGAAACATATTTACTGCTGA--GCAATGCCTTTGTCGTCTGATT
gi|155737 : CATACA-TT---GTAAACATCA---A---A--CCATTGT-TAATT----TATTTT--C
gi|155738 : CATACA-TT---GTAAACATCATTTATTCATTCATTCAT-TCATTCAATTATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTCACACGAAAAAAA---TGATACGATACCACGCAACAATTATCTATACACG-----TATATTTACCTTTGCAATGAAAACGAGCGAACTGTTGAAAACGTA--CAGAAT--ATATGTGACCAG-----GGCTTG-CTTTT-ATTTTAatcatgattgttttgaaatgcaccagttcttgacatcgctagagtgatac
gi|155739 : ATACA-TT---GTAAACATCA---A---A--CCATTGT-TCATT----TATTTT--CTGCTCTCGCAAG------ATCGG--CAT-----G-GGTATTTTGCGAGGCGTTGACAGGACAAGAA---TGATACAATACTACAAAACAATTATCCATACACA-----CATACATACCTTTG--A-----------TAACTGTTGAAAACGCG--CAAA----ATG--TAAACAGCAATCGGAATA-CCTTTCATTT
gi|155740 : TACAATT---GTAAACATCA---A---A--CAGTTGT-TCATT----TATTTT--CTACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCCAGGACAAAAA---TGATACGATACTAAGCAACAATTATCTATACACG-----TATATTTACCTTTG--AA-AACACCAGCGAACTGTTGAAAACGCA--AAAAA---ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCCGCAATTACTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAATGAC--TG--GTTTGGT
gi|155741 : TACAATT---GTAAACAT-A---A---A--CAATTGT-TAATT----TATTTT--CTGTTCTCGCAAG------ATGGA--CAA-----A-GTTATTTTG-----------CAGGACAAAAAAAATAATACGATACAACGCAACAATTATATATACACG-----TATATCTACCTTTG--AT-ATCCCAAGCGAACTGTTGAAAACGCA--CACAAT--ATA--TAAACAGCAATAGGAATA-CTTTTTAATTTACTTGCAAATACTTTGACTGAAAATTTGCGAAACATATTTACTGAAGA--GCAATGGTTTTGTCGTCTGGTT
gi|155742 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTTT--CTTCTCTCGCAAGCAGGGCATGGA--TATTTACGA-GCTATTTTGCGCGCCA-TTACAGGACAAAAA---TGATACAATACTACAC------------------------ATATATACCCTTG--AT-AACA----CTAAAAGTTGAAA
gi|155743 : TACA-TT---GTAATCATCA---A---A--CAATTGT-TCATT----TATTAT--CTTCTTT-----G------ATATT--TAC-----GAGCCATTTTGCGTGCCATTTACAGGACAAAAA---TGTTACAATACTACAC------------------------ATATATACCCTTG--AT-AACA----TTAAAAGTTGAAA
gi|155744 : AATTCAGGTCAACATCA---A---A--CAATTGT-TCATT----TATTTT--CAACTCTCGCAAG------ATGGA--CAT-----G-GTTATTTTGAGAGCCATTTCTAGGACACAAA---TGATACGATACTACGCAACAATTATATATACAAC-----TATATTTACCTTTG--A-----------TAACTGTTGGAAACGCA--AAAAAT--ATA--TAAACAGCAATCGGAATA-GTTTTCATTTTACCCGCAATTGCTTTGACCGAAACTTTGCGAAACATATTTACTGCAGA--GCAGTGATTTT-CCGTCTGGTT
gi|155745 : ATT---GTCAACATCA---A---A--CCATTGT-TCATT----AATTTT--CTGCTCTCGCAAG------ATGGGGTCAT-----G-GATATTTTGCGAGCCATTTACAGGACAAAAA---TGATACAATACTACAAAATGATTGTCCACACAC
gi|155746 : CATCA---T---A--CAAT-GTATGATT----TACATT--CTGCTCTCGCAAG------ATGGG--CAT-----G-GATATTTTG----------ACAGGACCAGAA---TTATACTATACTACATAACACTTATCTATACACA-----CATATATACCTTTG--AT-AACA----CTAACTGTTGTAAACGCA--CAAA----ATG--TAAACAGCTATCGGAATA-CTTTTCA----------------TTTGACCGAAACTTTGCGAAACATAATTACTGCATA--GCAAGGACTGTTTCGTTTGGTT
gi|155747 : ATAGT-TCATT----TATTTT--CTGCTCTCACAAG------CTTGA--TAT-----G-GATATTTTG--------------GACAAAAA---T-ATACACTTCTACACAATAATTATCTACACAGG-----CATACATACCTTTA--AT-AA---CAG-TACTTGTTGAAA---CAATCAATAT--TTA--TA
gi|155748 : TATATATATATGAAATATATATATACCTTTG--AT-AACAC----TAACTGTTGAAAACGCG--CAAAAT--GTC----AACAGCAATCGATATT-ATTTTCATTTTACCCGCAATTATTTTGACCGAAACTTTGCGAAACATATTTACTGCATA--GCAAGGACTTTGTCGTCTTGTT
gi|155749 : AACACA--CAAAAC-----------CAGAAATCGGATTA-CTTTTCGTTTTACCC-----------------------GCGAAACATATTTCCTGCATA--TTAAGCACTTTCTCGTCCGGT
gi|155750 : AACGCG--CAAAAT--GTA----AACAGCAATTTGAATATTTTTTCATTTTACCCGCAA
gi|155751 : CGCA--AAAAAA--GTG--CAAACA---ATCGGAACA-CTTTTCATTTTACCCGCA-----------------------AAACATATTTACTGCATA--TTAAGCACATTCTCGTCCGATT
gi|155752 : AT--ATA--TAAACAGCAATCGGAATA-CTTTTCATTTTACCGGCAAATACTTTG----------------ACATATTTACTGCAGA--ACAATGACTTTGTCGTCTAGTT
gi|155753 : CATTTTACCTGCAATTATTCTGACCGTTAATTTTCGAAACATATTTACCGCATATTACGCT--CTTTGTTGTCTGGTT