lowQualScore : 2
lowQualScore : 0 2 4444 2 0
lowQualScore : . . .... . .
lowQualScore : 5 1 5555 0 8
consensus : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
Reference ( gi|8316 ) : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAATTA-CA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8314 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTGCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8315 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGTGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8312 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGAAATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8318 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGACATAATAGAATGACCAATTCCATTTAGGTTCAC-AATTTCTCTGGCAAAACTTAGAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8322 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGACATAATAGAATGATCCATTCCATTTAGGTTCAA-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATAACGTAAATACTTTGAAGGTTTCGAGGGA
gi|8319 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAA-TAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATT-CA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTGCAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8320 : ATATCAAACAGGCATACATATTGTAATGACTTGTAAATAAATTGCTTGGACACAAGTAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAAGTCTTTGAAGGTTTCGAGGGA
gi|8313 : ATATCAAACAGGCATACATGTTGTAATTAATTGTGAATAAATTGCTCGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-AA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8317 : ATATCAAACAGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-AA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATTGTAGAAATACTTTGGAGGTTTCGAGGGA
gi|8324 : ATATCAAACAGGCATACATGTTGTGATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTGAAAA-TA-CA----GAAACCCCTTTAACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGATATACTTTGAAGGTTTCGAAGGA
gi|8325 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTGAAAA-TA-CA----GAAATCCCTTTAACATAATAGAATGACCCATTCCATTAAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGAAATACTTTGAAGGTTTTGAGGGA
gi|8328 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-CA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACA-------------CACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8323 : ATATCAAACGGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAACGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAAATA-AA----GAAACCCCTTCAACATTATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATTGAAGAAAATTGTGGAAATACTTTGAAAGTTTCGAGGAA
gi|8327 : ATATCAAACAAGTATACATGTTATAATGAATTGTAAACAAATTTCTTAGACACAAGAAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGATAAATA-CA----GAAACACCTTTGACATTATAGAATGACCCATTCCATTTAGGTTCACAAATTTCCCTGGCAAAATTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8321 : ATATCAAACAGGCATACATGTTGTAATGAATTGCAAATAAATTGCTTGGACACAAGAAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATCGAAAA-TA-CAGACTGAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAGGGTCAC-TGTTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCAAGGGA
gi|8326 : ATTTTAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTAGACACAAGAAAATGGTAAACAATTATTTGTGAGACAAAACATCCAAAGATAAAAAAA-A-AA----GAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAAGTTCAC-TGTTTCCCTGGTCAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGGTGGTTTCAAGGGA
gi|8329 : ATAT-AAACAGGCATACATGTTGTAATGA-----------ATTGT--------AAATAAA----------TTGCTTG---GACAAAACATACAAAGATTGAAAAATA-CA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8330 : ATATCAAACACGCATACATGTTGTAATGAACTGTAAATACATTGCTTGGACACATGAATAGGGTTATCAATTATTGGTGAGACAAA-C---CAATGATCGAAAAATA-CA----GAAACCCCTTTGAAATTACAGAATGACCCATTCCATTTACGTTCAC-AGTTTCACTGGCAAATCTTACAAATGGAAGAAAATCGTAGATATAC-TTAAAGGTTTCGATGGA
gi|8331 : CAAAGATAAAAAAGAAATA----GAAACCCATTTGA--------AATTAC----TCCATTTATGTTCAC---TGTGCATAGCAAAATCTACAAATAGCGGAAA-TCAAGAACCTACTTTAAAGGTTTCAAGG
gi|8332 : ATTCCATTTATGTTCAC---TGTGCATAGCAAAACCTACACATGGCGGAAAAC--------TACTTTAAATGTTTCAAGGGA
gi|8333 : aagataaaaaagaaaccgaaaccaatttgaaattATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
Alignments
lowQualScore : 3 4444 1 0
lowQualScore : . .... . .
lowQualScore : 8 0000 9 3
consensus : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
Reference ( family-754 ) : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
gi|8312 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGAAATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8313 : ATATCAAACAGGCATACATGTTGTAATTAATTGTGAATAAATTGCTCGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8314 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTGCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8315 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGTGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8316 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-TTACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8317 : ATATCAAACAGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATTGTAGAAATACTTTGGAGGTTTCGAGGGA
gi|8318 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCAATTCCATTTAGGTTCAC-AATTTCTCTGGCAAAACTTAGAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8319 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAA-TAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATTCA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTGCAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8320 : ATATCAAACAGGCATACATATTGTAATGACTTGTAAATAAATTGCTTGGACACAAGTAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAAGTCTTTGAAGGTTTCGAGGGA
gi|8321 : ATATCAAACAGGCATACATGTTGTAATGAATTGCAAATAAATTGCTTGGACACAAGAAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATCG-AAA-ATACAGACTGAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAGGGTCAC-TGTTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCAAGGGA
gi|8322 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGATCCATTCCATTTAGGTTCAA-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATAACGTAAATACTTTGAAGGTTTCGAGGGA
gi|8323 : ATATCAAACGGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAACGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTCAACATTATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATTGAAGAAAATTGTGGAAATACTTTGAAAGTTTCGAGGAA
gi|8324 : ATATCAAACAGGCATACATGTTGTGATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTG-AAA-ATACA----GAAACCCCTTTAACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGATATACTTTGAAGGTTTCGAAGGA
gi|8325 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTG-AAA-ATACA----GAAATCCCTTTAACATAATAGAATGACCCATTCCATTAAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGAAATACTTTGAAGGTTTTGAGGGA
gi|8326 : ATTTTAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTAGACACAAGAAAATGGTAAACAATTATTTGTGAGACAAAACATCCAAAGATAAAAAA-A-AAA----GAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAAGTTCAC-TGTTTCCCTGGTCAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGGTGGTTTCAAGGGA
gi|8327 : ATATCAAACAAGTATACATGTTATAATGAATTGTAAACAAATTTCTTAGACACAAGAAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGATAA-ATACA----GAAACACCTTTGACATTATAGAATGACCCATTCCATTTAGGTTCACAAATTTCCCTGGCAAAATTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8328 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACA-------------CACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8329 : ATAT-AAACAGGCATACATGTTGTAATGA-----------ATTGT--------AAATAAA----------TTGCTTG---GACAAAACATACAAAGATTGAAAA-ATACA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8330 : ATATCAAACACGCATACATGTTGTAATGAACTGTAAATACATTGCTTGGACACATGAATAGGGTTATCAATTATTGGTGAGACAAA-C---CAATGATCGAAAA-ATACA----GAAACCCCTTTGAAATTACAGAATGACCCATTCCATTTACGTTCAC-AGTTTCACTGGCAAATCTTACAAATGGAAGAAAATCGTAGATATAC-TTAAAGGTTTCGATGGA
gi|8331 : CAAAGATAAAAAAGAAATA----GAAACCCATTTGA--------AATTAC----TCCATTTATGTTCAC---TGTGCATAGCAAAATCTACAAATAG-CGGAAATCAAGAACCTACTTTAAAGGTTTCAAGG
gi|8332 : AAGATAAAAAAGAAACC----GAAACCAATTTGA--------AAT----TATTCCATTTATGTTCAC---TGTGCATAGCAAAACCTACACATGGCGGAAAAC--------TACTTTAAATGTTTCAAGGGA
gi|8333 : ATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
Alignments
lowQualScore : 3 4444 1 0
lowQualScore : . .... . .
lowQualScore : 8 0000 9 3
consensus : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
Reference ( family-754 ) : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
gi|8312 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGAAATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8313 : ATATCAAACAGGCATACATGTTGTAATTAATTGTGAATAAATTGCTCGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8314 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTGCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8315 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGTGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8316 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-TTACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8317 : ATATCAAACAGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATTGTAGAAATACTTTGGAGGTTTCGAGGGA
gi|8318 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCAATTCCATTTAGGTTCAC-AATTTCTCTGGCAAAACTTAGAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8319 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAA-TAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATTCA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTGCAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8320 : ATATCAAACAGGCATACATATTGTAATGACTTGTAAATAAATTGCTTGGACACAAGTAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAAGTCTTTGAAGGTTTCGAGGGA
gi|8321 : ATATCAAACAGGCATACATGTTGTAATGAATTGCAAATAAATTGCTTGGACACAAGAAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATCG-AAA-ATACAGACTGAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAGGGTCAC-TGTTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCAAGGGA
gi|8322 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGATCCATTCCATTTAGGTTCAA-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATAACGTAAATACTTTGAAGGTTTCGAGGGA
gi|8323 : ATATCAAACGGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAACGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTCAACATTATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATTGAAGAAAATTGTGGAAATACTTTGAAAGTTTCGAGGAA
gi|8324 : ATATCAAACAGGCATACATGTTGTGATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTG-AAA-ATACA----GAAACCCCTTTAACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGATATACTTTGAAGGTTTCGAAGGA
gi|8325 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTG-AAA-ATACA----GAAATCCCTTTAACATAATAGAATGACCCATTCCATTAAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGAAATACTTTGAAGGTTTTGAGGGA
gi|8326 : ATTTTAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTAGACACAAGAAAATGGTAAACAATTATTTGTGAGACAAAACATCCAAAGATAAAAAA-A-AAA----GAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAAGTTCAC-TGTTTCCCTGGTCAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGGTGGTTTCAAGGGA
gi|8327 : ATATCAAACAAGTATACATGTTATAATGAATTGTAAACAAATTTCTTAGACACAAGAAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGATAA-ATACA----GAAACACCTTTGACATTATAGAATGACCCATTCCATTTAGGTTCACAAATTTCCCTGGCAAAATTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8328 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACA-------------CACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8329 : ATAT-AAACAGGCATACATGTTGTAATGA-----------ATTGT--------AAATAAA----------TTGCTTG---GACAAAACATACAAAGATTGAAAA-ATACA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8330 : ATATCAAACACGCATACATGTTGTAATGAACTGTAAATACATTGCTTGGACACATGAATAGGGTTATCAATTATTGGTGAGACAAA-C---CAATGATCGAAAA-ATACA----GAAACCCCTTTGAAATTACAGAATGACCCATTCCATTTACGTTCAC-AGTTTCACTGGCAAATCTTACAAATGGAAGAAAATCGTAGATATAC-TTAAAGGTTTCGATGGA
gi|8331 : CAAAGATAAAAAAGAAATA----GAAACCCATTTGA--------AATTAC----TCCATTTATGTTCAC---TGTGCATAGCAAAATCTACAAATAG-CGGAAATCAAGAACCTACTTTAAAGGTTTCAAGG
gi|8332 : AAGATAAAAAAGAAACC----GAAACCAATTTGA--------AAT----TATTCCATTTATGTTCAC---TGTGCATAGCAAAACCTACACATGGCGGAAAAC--------TACTTTAAATGTTTCAAGGGA
gi|8333 : ATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
blockSeqs : G GACT A
blockSeqs : G . .
blockSeqs : . . .
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blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqCons :
originalCons : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
finalCons : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
Alignments
lowQualScore : 3 4444 1 0
lowQualScore : . .... . .
lowQualScore : 8 0000 9 3
consensus : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
Reference ( family-754 ) : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGCGGAAATACTTTGAAGGTTTCGAGGGA
gi|8312 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGAAATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8313 : ATATCAAACAGGCATACATGTTGTAATTAATTGTGAATAAATTGCTCGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8314 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTGCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8315 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGTGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8316 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-TTACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8317 : ATATCAAACAGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAAAGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGACAAAACTTACAAATGGAAGAAAATTGTAGAAATACTTTGGAGGTTTCGAGGGA
gi|8318 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCAATTCCATTTAGGTTCAC-AATTTCTCTGGCAAAACTTAGAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8319 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAA-TAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATTCA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTGCAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8320 : ATATCAAACAGGCATACATATTGTAATGACTTGTAAATAAATTGCTTGGACACAAGTAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAAGTCTTTGAAGGTTTCGAGGGA
gi|8321 : ATATCAAACAGGCATACATGTTGTAATGAATTGCAAATAAATTGCTTGGACACAAGAAAAGGGTAAACAATTATTTGTGAGACAAAACATACAAAGATCG-AAA-ATACAGACTGAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAGGGTCAC-TGTTTCCCTGGCAAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCAAGGGA
gi|8322 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGATCCATTCCATTTAGGTTCAA-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATAACGTAAATACTTTGAAGGTTTCGAGGGA
gi|8323 : ATATCAAACGGGCATACATGTTGTAATTAATTGTAAATAAATTGCTTGGACACAAGTAAACGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATAAA----GAAACCCCTTCAACATTATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATTGAAGAAAATTGTGGAAATACTTTGAAAGTTTCGAGGAA
gi|8324 : ATATCAAACAGGCATACATGTTGTGATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTG-AAA-ATACA----GAAACCCCTTTAACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGATATACTTTGAAGGTTTCGAAGGA
gi|8325 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATAAAAAGATTG-AAA-ATACA----GAAATCCCTTTAACATAATAGAATGACCCATTCCATTAAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAAT-GTGGAAATACTTTGAAGGTTTTGAGGGA
gi|8326 : ATTTTAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTAGACACAAGAAAATGGTAAACAATTATTTGTGAGACAAAACATCCAAAGATAAAAAA-A-AAA----GAAACCCCTTTGAAATTATAGAATGACCCATTCCATTTAAGTTCAC-TGTTTCCCTGGTCAAACTTACAAATGGAAGAAAATCGTGGAAATACTTTGGTGGTTTCAAGGGA
gi|8327 : ATATCAAACAAGTATACATGTTATAATGAATTGTAAACAAATTTCTTAGACACAAGAAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGATAA-ATACA----GAAACACCTTTGACATTATAGAATGACCCATTCCATTTAGGTTCACAAATTTCCCTGGCAAAATTTACAAATGGAAGAAAATCGTGGAAATACTTTGAAGGTTTCGAGGGA
gi|8328 : ATATCAAACAGGCATACATGTTGTAATGAATTGTAAATAAATTGCTTGGACACAAGTAAAGGGCAAACAATTATTTGTGAGACAAAACATACAAAGATTGAAAA-ATACA----GAAACCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACA-------------CACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8329 : ATAT-AAACAGGCATACATGTTGTAATGA-----------ATTGT--------AAATAAA----------TTGCTTG---GACAAAACATACAAAGATTGAAAA-ATACA----GAATCCCCTTTGACATAATAGAATGACCCATTCCATTTAGGTTCAC-AATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA
gi|8330 : ATATCAAACACGCATACATGTTGTAATGAACTGTAAATACATTGCTTGGACACATGAATAGGGTTATCAATTATTGGTGAGACAAA-C---CAATGATCGAAAA-ATACA----GAAACCCCTTTGAAATTACAGAATGACCCATTCCATTTACGTTCAC-AGTTTCACTGGCAAATCTTACAAATGGAAGAAAATCGTAGATATAC-TTAAAGGTTTCGATGGA
gi|8331 : CAAAGATAAAAAAGAAATA----GAAACCCATTTGA--------AATTAC----TCCATTTATGTTCAC---TGTGCATAGCAAAATCTACAAATAG-CGGAAATCAAGAACCTACTTTAAAGGTTTCAAGG
gi|8332 : AAGATAAAAAAGAAACC----GAAACCAATTTGA--------AAT----TATTCCATTTATGTTCAC---TGTGCATAGCAAAACCTACACATGGCGGAAAAC--------TACTTTAAATGTTTCAAGGGA
gi|8333 : ATTTCCCTGGCAAAACTTACAAATGGAAGAAAATCACGGAAATACTTTGAAGGTTTCGAGGGA