lowQualScore : 1 55
lowQualScore : . ..
lowQualScore : 8 33
consensus : AAACGAATATCAAACGCGTTTTAAA-CG-NTATACAAACGGACTAAAAATGCGAACGAAACGATAAACG
Reference ( gi|25682 ) : AAACGAATATCAAACGCGTTTTAAA-CG-ATATACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25683 : AAACGAATATCAAACGCGTTTTAAA-CG-ATATACAAACGGACTAAAAATGCAAACGAAACGATAAATG
gi|25680 : AAACGAATATCAAACGCGTTTTAAA-CG-ATATACAAACAGACTAAAAATGCAAACGAAACGATAAACG
gi|25684 : AAACGAATATCAAACGCGGTTTAAA-CG-ATATACAAACGGACTAAAAATGCAAACGAAACGATAAACGaaa
gi|25686 : AAACGAATATCAAACGCGTTTTAAA-TG-ATATACAAACGGACTAAAAATGCAAACGAAACGATAAATGaaa
gi|25687 : AAAAGAATATCAAACACGTTTTAAA-CG-ATATACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25692 : AAACGAAAATCAAACGCGTTTTAAA-CG-ATATACAAACGGACTAAAAATGCAAACAAAACAATAAACGaaa
gi|25691 : AAATGAATATCAAACGCGTTTTAAA-CG-ATATACAAACGGACTAAAAATGCAAATGAAACGATA
gi|25690 : AAACGAATATCAAACGCGCTTTAAA-CG-ATATACAAACAAACTAAAAATGCAAACGAAACAATATACGcatgga
gi|25689 : AAACGAATATCGAACACGTTTTAAA-CG-ATATACAAACAGACTAAAAATGCAAACAAAACGATATACGaaa
gi|25678 : AAACGAATATCAAATGCGTTTTAAA-CG-TTATACAAACAGATTAAAAATGCGAACGAAACGATAAACGaaa
gi|25685 : AAACGAATATCAAACGCGTTTTAAAACG-ATATACAAATGGACTAAAAATGCAAACGAAACTATATACGg
gi|25679 : AAACGAATGTCAAACGCGTTTTAAA-CG-TTATACAAACAGACTAAAAATGCGAACGAAACGATAAAaaa
gi|25693 : AAACGAATATCAAAAGCGTTTTAAA-CA-TTATACAAACGGACTAAAAATGCAAACGAAACG--AAACGaggaa
gi|25681 : AAATGAATATCAAACGTGTTTTAAA-CG-TTATACAAACAGACTAAAAATGCGAACGAAACGATA
gi|25695 : AAACAAATATCAAACACCTTTAAAA-CG-TTATACAAACGGACTAAAAATGTGAACAAAACGATAAACGcatggaa
gi|25688 : AAACAAATATCAAACATATTTTAAA-CG-TTATACAAACAGACTCAAAATGCGAACAAAACGATAAACGaaa
gi|25694 : AAACGAATACTAAACGCGTATTTAA-CG-TTATACAAATGGACTACAAATGCTAACGAAACGATAAACaaa
gi|25697 : AAACAAATATCAAACGCGTTTTAGA-CGTAT-TACAAATGGACTAAAAATGTGAGTGAAACAATAAACaaaa
gi|25696 : AAACAAATAT-GAACGCGTTTGAAA-TG-TTATACAAACGGACTAAAAATGCGAATGAAATGATAAAaaaa
gi|25698 : AAACGAATATCAAACACGTTTCGAA-CA-TTATACAAATGGACT-AAAATGCTAACAAAACAATaggaa
gi|25699 : ACAAATATCAAGCGCGTTTTCAA-CG-TTATACAAACAGACTAAAAATGTGAATGATATGATAAATG
gi|25700 : TACCAAACGGGTTTTAAA-CG-GTATACAAACGGACTAAAAATGCAAATGAAACGAAAAACGaaa
Alignments
lowQualScore : 1 2 1 1
lowQualScore : . . . .
lowQualScore : 7 7 7 2
consensus : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
Reference ( family-752 ) : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
gi|25678 : AAACGAATATCAAATGCGTTTTAAA-CGTTA-TACAAACAGATTAAAAATGCGAACGAAACGATAAACG
gi|25679 : AAACGAATGTCAAACGCGTTTTAAA-CGTTA-TACAAACAGACTAAAAATGCGAACGAAACGATAAAg
gi|25680 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACAGACTAAAAATGCAAACGAAACGATAAACGaggaa
gi|25681 : AAATGAATATCAAACGTGTTTTAAA-CGTTA-TACAAACAGACTAAAAATGCGAACGAAACGATAaaa
gi|25682 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACGcatggaa
gi|25683 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAATG
gi|25684 : AAACGAATATCAAACGCGGTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25685 : AAACGAATATCAAACGCGTTTTAAAACGATA-TACAAATGGACTAAAAATGCAAACGAAACTATATACGaaa
gi|25686 : AAACGAATATCAAACGCGTTTTAAA-TGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAATGaaa
gi|25687 : AAAAGAATATCAAACACGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25688 : AAACAAATATCAAACATATTTTAAA-CGTTA-TACAAACAGACTCAAAATGCGAACAAAACGATAAACGaaa
gi|25689 : AAACGAATATCGAACACGTTTTAAA-CGATA-TACAAACAGACTAAAAATGCAAACAAAACGATATACGaaa
gi|25690 : AAACGAATATCAAACGCGCTTTAAA-CGATA-TACAAACAAACTAAAAATGCAAACGAAACAATATACGaaa
gi|25691 : AAATGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAATGAAACGATAaaa
gi|25692 : AAACGAAAATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACAAAACAATAAACGcatgga
gi|25693 : AAACGAATATCAAAAGCGTTTTAAA-CATTA-TACAAACGGACTAAAAATGCAAACGAAACG--AAACG
gi|25694 : AAACGAATACTAAACGCGTATTTAA-CGTTA-TACAAATGGACTACAAATGCTAACGAAACGATAAAC
gi|25695 : AAACAAATATCAAACACCTTTAAAA-CGTTA-TACAAACGGACTAAAAATGTGAACAAAACGATAAACGaaaa
gi|25696 : AAACAAATAT-GAACGCGTTTGAAA-TGTTA-TACAAACGGACTAAAAATGCGAATGAAATGATAAAaaa
gi|25697 : AAACAAATATCAAACGCGTTTTAGA-CG-TATTACAAATGGACTAAAAATGTGAGTGAAACAATAAACaggaa
gi|25698 : AAACGAATATCAAACACGTTTCGAA-CATTA-TACAAATGGACT-AAAATGCTAACAAAACAATaaaa
gi|25699 : ACAAATATCAAGCGCGTTTTCAA-CGTTA-TACAAACAGACTAAAAATGTGAATGATATGATAAATG
gi|25700 : TACCAAACGGGTTTTAAA-CGGTA-TACAAACGGACTAAAAATGCAAATGAAACGAAAAACGaaa
Alignments
lowQualScore : 1 2 1 1
lowQualScore : . . . .
lowQualScore : 7 7 7 2
consensus : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
Reference ( family-752 ) : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
gi|25678 : AAACGAATATCAAATGCGTTTTAAA-CGTTA-TACAAACAGATTAAAAATGCGAACGAAACGATAAACG
gi|25679 : AAACGAATGTCAAACGCGTTTTAAA-CGTTA-TACAAACAGACTAAAAATGCGAACGAAACGATAAAg
gi|25680 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACAGACTAAAAATGCAAACGAAACGATAAACGaggaa
gi|25681 : AAATGAATATCAAACGTGTTTTAAA-CGTTA-TACAAACAGACTAAAAATGCGAACGAAACGATAaaa
gi|25682 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACGcatggaa
gi|25683 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAATG
gi|25684 : AAACGAATATCAAACGCGGTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25685 : AAACGAATATCAAACGCGTTTTAAAACGATA-TACAAATGGACTAAAAATGCAAACGAAACTATATACGaaa
gi|25686 : AAACGAATATCAAACGCGTTTTAAA-TGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAATGaaa
gi|25687 : AAAAGAATATCAAACACGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25688 : AAACAAATATCAAACATATTTTAAA-CGTTA-TACAAACAGACTCAAAATGCGAACAAAACGATAAACGaaa
gi|25689 : AAACGAATATCGAACACGTTTTAAA-CGATA-TACAAACAGACTAAAAATGCAAACAAAACGATATACGaaa
gi|25690 : AAACGAATATCAAACGCGCTTTAAA-CGATA-TACAAACAAACTAAAAATGCAAACGAAACAATATACGaaa
gi|25691 : AAATGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAATGAAACGATAaaa
gi|25692 : AAACGAAAATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACAAAACAATAAACGcatgga
gi|25693 : AAACGAATATCAAAAGCGTTTTAAA-CATTA-TACAAACGGACTAAAAATGCAAACGAAACG--AAACG
gi|25694 : AAACGAATACTAAACGCGTATTTAA-CGTTA-TACAAATGGACTACAAATGCTAACGAAACGATAAAC
gi|25695 : AAACAAATATCAAACACCTTTAAAA-CGTTA-TACAAACGGACTAAAAATGTGAACAAAACGATAAACGaaaa
gi|25696 : AAACAAATAT-GAACGCGTTTGAAA-TGTTA-TACAAACGGACTAAAAATGCGAATGAAATGATAAAaaa
gi|25697 : AAACAAATATCAAACGCGTTTTAGA-CG-TATTACAAATGGACTAAAAATGTGAGTGAAACAATAAACaggaa
gi|25698 : AAACGAATATCAAACACGTTTCGAA-CATTA-TACAAATGGACT-AAAATGCTAACAAAACAATaaaa
gi|25699 : ACAAATATCAAGCGCGTTTTCAA-CGTTA-TACAAACAGACTAAAAATGTGAATGATATGATAAATG
gi|25700 : TACCAAACGGGTTTTAAA-CGGTA-TACAAACGGACTAAAAATGCAAATGAAACGAAAAACGaaa
blockSeqs : A T T G
blockSeqs : . A . A
blockSeqs : . T . G
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . T . G
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . A . A
blockSeqs : . T . A
blockSeqs : . T . T
blockSeqs : . T . G
blockSeqs : . T . G
blockSeqs : . T . G
blockSeqs : . T . T
blockSeqs : . G . G
blockSeqs : . . . A
blockSeqCons :
originalCons : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
finalCons : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
Alignments
lowQualScore : 1 2 1 1
lowQualScore : . . . .
lowQualScore : 7 7 7 2
consensus : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
Reference ( family-752 ) : AAACGAATATCAAACGCGTTTTAAA-CGNTA-TACAAACGGACTAAAAATGCGAACGAAACGATAAACG
gi|25678 : AAACGAATATCAAATGCGTTTTAAA-CGTTA-TACAAACAGATTAAAAATGCGAACGAAACGATAAACG
gi|25679 : AAACGAATGTCAAACGCGTTTTAAA-CGTTA-TACAAACAGACTAAAAATGCGAACGAAACGATAAAg
gi|25680 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACAGACTAAAAATGCAAACGAAACGATAAACGaggaa
gi|25681 : AAATGAATATCAAACGTGTTTTAAA-CGTTA-TACAAACAGACTAAAAATGCGAACGAAACGATAaaa
gi|25682 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACGcatggaa
gi|25683 : AAACGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAATG
gi|25684 : AAACGAATATCAAACGCGGTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25685 : AAACGAATATCAAACGCGTTTTAAAACGATA-TACAAATGGACTAAAAATGCAAACGAAACTATATACGaaa
gi|25686 : AAACGAATATCAAACGCGTTTTAAA-TGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAATGaaa
gi|25687 : AAAAGAATATCAAACACGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACGAAACGATAAACG
gi|25688 : AAACAAATATCAAACATATTTTAAA-CGTTA-TACAAACAGACTCAAAATGCGAACAAAACGATAAACGaaa
gi|25689 : AAACGAATATCGAACACGTTTTAAA-CGATA-TACAAACAGACTAAAAATGCAAACAAAACGATATACGaaa
gi|25690 : AAACGAATATCAAACGCGCTTTAAA-CGATA-TACAAACAAACTAAAAATGCAAACGAAACAATATACGaaa
gi|25691 : AAATGAATATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAATGAAACGATAaaa
gi|25692 : AAACGAAAATCAAACGCGTTTTAAA-CGATA-TACAAACGGACTAAAAATGCAAACAAAACAATAAACGcatgga
gi|25693 : AAACGAATATCAAAAGCGTTTTAAA-CATTA-TACAAACGGACTAAAAATGCAAACGAAACG--AAACG
gi|25694 : AAACGAATACTAAACGCGTATTTAA-CGTTA-TACAAATGGACTACAAATGCTAACGAAACGATAAAC
gi|25695 : AAACAAATATCAAACACCTTTAAAA-CGTTA-TACAAACGGACTAAAAATGTGAACAAAACGATAAACGaaaa
gi|25696 : AAACAAATAT-GAACGCGTTTGAAA-TGTTA-TACAAACGGACTAAAAATGCGAATGAAATGATAAAaaa
gi|25697 : AAACAAATATCAAACGCGTTTTAGA-CG-TATTACAAATGGACTAAAAATGTGAGTGAAACAATAAACaggaa
gi|25698 : AAACGAATATCAAACACGTTTCGAA-CATTA-TACAAATGGACT-AAAATGCTAACAAAACAATaaaa
gi|25699 : ACAAATATCAAGCGCGTTTTCAA-CGTTA-TACAAACAGACTAAAAATGTGAATGATATGATAAATG
gi|25700 : TACCAAACGGGTTTTAAA-CGGTA-TACAAACGGACTAAAAATGCAAATGAAACGAAAAACGaaa