lowQualScore : 11
lowQualScore : 1 1 22 1 1 0 55 7
lowQualScore : . . .. . . . .. .
lowQualScore : 9 9 44 7 7 8 55 9
consensus : TTT-T-TCACCGAATT-TACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
Reference ( gi|155708 ) : TTT-T-TCACCGAATT-AACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155711 : TTG-T-TCACCGAATG-AACGTTCAAACTAAC-A-ATAATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155712 : TTT-T-TCACCGAATA-AACGTTCAAACTAAC-A-ATTAATAGCCGGGTTCACCTCAACGTACCATGTT
gi|155710 : TTT-G-TCACCGAATT-AACGTTCAAACTAAC-A-ATTTTTAGCCGAGTTCAACTCCATGTACCATTTT
gi|155716 : TTT-T-TCACCGAATT-TACGTTCAAAGTAAC-A-CTTATTAGCCGGATTCACCTCTTTGCACCATTTT
gi|155717 : TTTAT-TTACCGAATT-TACGTTCCAATTAAC-A-ATTAATAGCCGGGTTCACATCCATGTACCATTTT
gi|155722 : TTT-T-TCACCGAATT-TACGTTCAAACTAGC-A-ATTATAAGCCGGATCCATCTCTCTGCACCA
gi|155720 : TTT-TATCACCGAATTTAAC-TTCAAACTAAC-A-ATTATTAGGCGGGTTTAAGTCCATGTACCATTTTct
gi|155713 : TTT-T-TCACCGAATT-TACGTTCAAACCTAC-A-CTTATTAGCCGGGTTCACGTCTGTGAATCA-GTT
gi|155723 : TTT-T-GTAACGAATT-TACATTCAAATTAAC-A-ATGCTTATTCGGGTTCACCTCCATGTACCATTTT
gi|155714 : TTT-T-TCACCGAATT-TACGTTCGAACTAGC-A-ATTATAAGACGGATTCATTTCTCTGCACCAT
gi|155709 : TTT-T-TCACCGAATT-TACGTTAAAACTAGC-A-ATTATAAGCCGGATTCATCTCTCTGATCCATt
gi|155721 : TTC-T-TCACCGAATT-TAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCTATCTGCACCATt
gi|155718 : TTT-T-TCACCGAATT-TACGTTCAAACTAAC-A-ATTATGAGCCTGATTTATTTCTCTGCATCGTTTTtt
gi|155719 : TTC-T-TCACCGAATT-TAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCT
gi|155715 : TTT-C-TCACCAAATT-TACGTTCATACTAAC-A-CTTATAAGCCTGATTCATCTCACTGCACCATatctgcacattt
gi|155724 : TTT-T-TAACCGAATT-TACGTTTAAACTAACAA-ATGATGAACCGGATTCTCCTCGCTGCACtt
gi|155725 : TT-T-TCACCAAATT-TACGTTCAAACTAAT-A-ATTATTAA----------CTCCGTGTACCATTTTatttt
gi|155726 : T-T-TCACCGATTT-TACGTTCAAACTAAC-A-ATTATTAGACGGGTTCACCTCCATGTACCATTTT
gi|155727 : T-T-TCACCGAATT-TACGTTAAAACTAAC-A-ATGATGATCCGGATTCCCATCACTGCACC
gi|155729 : T-T-TCATAGAATC-GACGTTTAAACTAAC-A-ATGCTTATCTGAATTCTTCTCCATGTAttttt
gi|155728 : T-T-TTACCTAATT-CACGTTCAAATTAAC-AGATAACGATCCGGATTCGCCTCTCTGCACCA-GTT
gi|155730 : CGAATT-AACGTTATAACTAAC-A-ATTATTAACTGAGTTCAACTCCATGTACCATTTTt
gi|155731 : TT-CACGTTCAAACTAAC-A-ATTATATGCCAGATTCGTTTCTCTGTATCATTTT
Alignments
lowQualScore : 1 1 1 1 0 11 0
lowQualScore : . . . . . .. .
lowQualScore : 8 8 7 7 4 88 1
consensus : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
Reference ( family-723 ) : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
gi|155708 : TTT-T-TCACCGAATTAACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155709 : TTT-T-TCACCGAATTTACGTTAAAACTAGC-A-ATTATAAGCCGGATTCATCTCTCTGATCCATT
gi|155710 : TTT-G-TCACCGAATTAACGTTCAAACTAAC-A-ATTTTTAGCCGAGTTCAACTCCATGTACCATTTT
gi|155711 : TTG-T-TCACCGAATGAACGTTCAAACTAAC-A-ATAATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155712 : TTT-T-TCACCGAATAAACGTTCAAACTAAC-A-ATTAATAGCCGGGTTCACCTCAACGTACCATGTT
gi|155713 : TTT-T-TCACCGAATTTACGTTCAAACCTAC-A-CTTATTAGCCGGGTTCACGTCTGTGAATCAGTT
gi|155714 : TTT-T-TCACCGAATTTACGTTCGAACTAGC-A-ATTATAAGACGGATTCATTTCTCTGCACCATT
gi|155715 : TTT-C-TCACCAAATTTACGTTCATACTAAC-A-CTTATAAGCCTGATTCATCTCACTGCACCATTT
gi|155716 : TTT-T-TCACCGAATTTACGTTCAAAGTAAC-A-CTTATTAGCCGGATTCACCTCTTTGCACCATTTT
gi|155717 : TTTAT-TTACCGAATTTACGTTCCAATTAAC-A-ATTAATAGCCGGGTTCACATCCATGTACCATTTT
gi|155718 : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATGAGCCTGATTTATTTCTCTGCATCGTTTT
gi|155719 : TTC-T-TCACCGAATTTAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCTATCTGCA-CATTT
gi|155720 : TTT-TATCACCGAATTTAACTTCAAACTAAC-A-ATTATTAGGCGGGTTTAAGTCCATGTACCATTTT
gi|155721 : TTC-T-TCACCGAATTTAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCTATCTGCACCATTT
gi|155722 : TTT-T-TCACCGAATTTACGTTCAAACTAGC-A-ATTATAAGCCGGATCCATCTCTCTGCACCACT
gi|155723 : TTT-T-GTAACGAATTTACATTCAAATTAAC-A-ATGCTTATTCGGGTTCACCTCCATGTACCATTTT
gi|155724 : TTT-T-TAACCGAATTTACGTTTAAACTAACAA-ATGATGAACCGGATTCTCCTCGCTGCA-CATTTT
gi|155725 : TT-T-TCACCAAATTTACGTTCAAACTAAT-A-ATTATTAA----------CTCCGTGTACCATTTT
gi|155726 : T-T-TCACCGATTTTACGTTCAAACTAAC-A-ATTATTAGACGGGTTCACCTCCATGTACCATTTT
gi|155727 : T-T-TCACCGAATTTACGTTAAAACTAAC-A-ATGATGATCCGGATTCCCATCACTGCACCTTTTT
gi|155728 : T-T-TTACCTAATTCACGTTCAAATTAAC-AGATAACGATCCGGATTCGCCTCTCTGCACCAGTTT
gi|155729 : T-T-TCATAGAATCGACGTTTAAACTAAC-A-ATGCTTATCTGAATTCTTCTCCATGTA
gi|155730 : CGAATTAACGTTATAACTAAC-A-ATTATTAACTGAGTTCAACTCCATGTACCATTTT
gi|155731 : TTCACGTTCAAACTAAC-A-ATTATATGCCAGATTCGTTTCTCTGTATCATTTT
Alignments
lowQualScore : 1 1 1 1 0 11 0
lowQualScore : . . . . . .. .
lowQualScore : 8 8 7 7 4 88 1
consensus : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
Reference ( family-723 ) : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
gi|155708 : TTT-T-TCACCGAATTAACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155709 : TTT-T-TCACCGAATTTACGTTAAAACTAGC-A-ATTATAAGCCGGATTCATCTCTCTGATCCATT
gi|155710 : TTT-G-TCACCGAATTAACGTTCAAACTAAC-A-ATTTTTAGCCGAGTTCAACTCCATGTACCATTTT
gi|155711 : TTG-T-TCACCGAATGAACGTTCAAACTAAC-A-ATAATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155712 : TTT-T-TCACCGAATAAACGTTCAAACTAAC-A-ATTAATAGCCGGGTTCACCTCAACGTACCATGTT
gi|155713 : TTT-T-TCACCGAATTTACGTTCAAACCTAC-A-CTTATTAGCCGGGTTCACGTCTGTGAATCAGTT
gi|155714 : TTT-T-TCACCGAATTTACGTTCGAACTAGC-A-ATTATAAGACGGATTCATTTCTCTGCACCATT
gi|155715 : TTT-C-TCACCAAATTTACGTTCATACTAAC-A-CTTATAAGCCTGATTCATCTCACTGCACCATTT
gi|155716 : TTT-T-TCACCGAATTTACGTTCAAAGTAAC-A-CTTATTAGCCGGATTCACCTCTTTGCACCATTTT
gi|155717 : TTTAT-TTACCGAATTTACGTTCCAATTAAC-A-ATTAATAGCCGGGTTCACATCCATGTACCATTTT
gi|155718 : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATGAGCCTGATTTATTTCTCTGCATCGTTTT
gi|155719 : TTC-T-TCACCGAATTTAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCTATCTGCA-CATTT
gi|155720 : TTT-TATCACCGAATTTAACTTCAAACTAAC-A-ATTATTAGGCGGGTTTAAGTCCATGTACCATTTT
gi|155721 : TTC-T-TCACCGAATTTAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCTATCTGCACCATTT
gi|155722 : TTT-T-TCACCGAATTTACGTTCAAACTAGC-A-ATTATAAGCCGGATCCATCTCTCTGCACCACT
gi|155723 : TTT-T-GTAACGAATTTACATTCAAATTAAC-A-ATGCTTATTCGGGTTCACCTCCATGTACCATTTT
gi|155724 : TTT-T-TAACCGAATTTACGTTTAAACTAACAA-ATGATGAACCGGATTCTCCTCGCTGCA-CATTTT
gi|155725 : TT-T-TCACCAAATTTACGTTCAAACTAAT-A-ATTATTAA----------CTCCGTGTACCATTTT
gi|155726 : T-T-TCACCGATTTTACGTTCAAACTAAC-A-ATTATTAGACGGGTTCACCTCCATGTACCATTTT
gi|155727 : T-T-TCACCGAATTTACGTTAAAACTAAC-A-ATGATGATCCGGATTCCCATCACTGCACCTTTTT
gi|155728 : T-T-TTACCTAATTCACGTTCAAATTAAC-AGATAACGATCCGGATTCGCCTCTCTGCACCAGTTT
gi|155729 : T-T-TCATAGAATCGACGTTTAAACTAAC-A-ATGCTTATCTGAATTCTTCTCCATGTA
gi|155730 : CGAATTAACGTTATAACTAAC-A-ATTATTAACTGAGTTCAACTCCATGTACCATTTT
gi|155731 : TTCACGTTCAAACTAAC-A-ATTATATGCCAGATTCGTTTCTCTGTATCATTTT
blockSeqs : A A A G TC
blockSeqs : . . . . CA
blockSeqs : . . . . CA
blockSeqs : . . . . AA
blockSeqs : . . . . TG
blockSeqs : . . . . TC
blockSeqs : . . . . AC
blockSeqs : . . . . TT
blockSeqs : . . . . CA
blockSeqs : . . . . TC
blockSeqs : . . . . TC
blockSeqs : . . . . CA
blockSeqs : . . . . TC
blockSeqs : . . . . TC
blockSeqs : . . . . CA
blockSeqs : . . . . GC
blockSeqs : . . . . CG
blockSeqs : . . . . CA
blockSeqs : . . . . AC
blockSeqs : . . . . TC
blockSeqs : . . . . CA
blockSeqs : . . CA
blockSeqs : . . TC
blockSeqCons :
originalCons : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
finalCons : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
Alignments
lowQualScore : 1 1 1 1 0 11 0
lowQualScore : . . . . . .. .
lowQualScore : 8 8 7 7 4 88 1
consensus : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
Reference ( family-723 ) : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCNTGCACCATTTT
gi|155708 : TTT-T-TCACCGAATTAACGTTCAAACTAAC-A-ATTATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155709 : TTT-T-TCACCGAATTTACGTTAAAACTAGC-A-ATTATAAGCCGGATTCATCTCTCTGATCCATT
gi|155710 : TTT-G-TCACCGAATTAACGTTCAAACTAAC-A-ATTTTTAGCCGAGTTCAACTCCATGTACCATTTT
gi|155711 : TTG-T-TCACCGAATGAACGTTCAAACTAAC-A-ATAATTAGCCGGGTTCACCTCCATGTACCATGTT
gi|155712 : TTT-T-TCACCGAATAAACGTTCAAACTAAC-A-ATTAATAGCCGGGTTCACCTCAACGTACCATGTT
gi|155713 : TTT-T-TCACCGAATTTACGTTCAAACCTAC-A-CTTATTAGCCGGGTTCACGTCTGTGAATCAGTT
gi|155714 : TTT-T-TCACCGAATTTACGTTCGAACTAGC-A-ATTATAAGACGGATTCATTTCTCTGCACCATT
gi|155715 : TTT-C-TCACCAAATTTACGTTCATACTAAC-A-CTTATAAGCCTGATTCATCTCACTGCACCATTT
gi|155716 : TTT-T-TCACCGAATTTACGTTCAAAGTAAC-A-CTTATTAGCCGGATTCACCTCTTTGCACCATTTT
gi|155717 : TTTAT-TTACCGAATTTACGTTCCAATTAAC-A-ATTAATAGCCGGGTTCACATCCATGTACCATTTT
gi|155718 : TTT-T-TCACCGAATTTACGTTCAAACTAAC-A-ATTATGAGCCTGATTTATTTCTCTGCATCGTTTT
gi|155719 : TTC-T-TCACCGAATTTAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCTATCTGCA-CATTT
gi|155720 : TTT-TATCACCGAATTTAACTTCAAACTAAC-A-ATTATTAGGCGGGTTTAAGTCCATGTACCATTTT
gi|155721 : TTC-T-TCACCGAATTTAAGTTCAAACTAAC-A-ATTATTAACT-GGTTCACCTATCTGCACCATTT
gi|155722 : TTT-T-TCACCGAATTTACGTTCAAACTAGC-A-ATTATAAGCCGGATCCATCTCTCTGCACCACT
gi|155723 : TTT-T-GTAACGAATTTACATTCAAATTAAC-A-ATGCTTATTCGGGTTCACCTCCATGTACCATTTT
gi|155724 : TTT-T-TAACCGAATTTACGTTTAAACTAACAA-ATGATGAACCGGATTCTCCTCGCTGCA-CATTTT
gi|155725 : TT-T-TCACCAAATTTACGTTCAAACTAAT-A-ATTATTAA----------CTCCGTGTACCATTTT
gi|155726 : T-T-TCACCGATTTTACGTTCAAACTAAC-A-ATTATTAGACGGGTTCACCTCCATGTACCATTTT
gi|155727 : T-T-TCACCGAATTTACGTTAAAACTAAC-A-ATGATGATCCGGATTCCCATCACTGCACCTTTTT
gi|155728 : T-T-TTACCTAATTCACGTTCAAATTAAC-AGATAACGATCCGGATTCGCCTCTCTGCACCAGTTT
gi|155729 : T-T-TCATAGAATCGACGTTTAAACTAAC-A-ATGCTTATCTGAATTCTTCTCCATGTA
gi|155730 : CGAATTAACGTTATAACTAAC-A-ATTATTAACTGAGTTCAACTCCATGTACCATTTT
gi|155731 : TTCACGTTCAAACTAAC-A-ATTATATGCCAGATTCGTTTCTCTGTATCATTTT