lowQualScore : 11111111111111111 11 1111 1 111 1 2222 1 1 11 11
lowQualScore : 6 444 2 2 333 77777777777777777 99999999999 44444 4 55 6666 22 22 1 5 4444 22 6 333 5555 77777777 22 55 2 1 444 3 4444 1 6666666 2 0 0000 6 6666666 0 1 4 888 3 99 2 7 88 99 22
lowQualScore : . ... . . ... ................. ........... ..... . .. .... .. .. . . .... .. . ... .... ........ .. .. . . ... . .... . ....... . . .... . ....... . . . ... . .. . . .. .. ..
lowQualScore : 0 111 4 2 333 66666666666666666 00000000000 88888 8 22 9999 55 66 9 4 0000 66 5 555 6666 99999999 88 00 0 9 777 4 0000 9 2222222 6 7 2222 6 2222222 3 9 9 888 9 77 0 5 55 55 66
consensus : TTTTTTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACAAGTAC--GATATA-------GAACTAATTGT--TATGCAAACACNAGGTGAGGAAAGGAGAA-GTACGACATCT----AATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAA-AATGGACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
Reference ( gi|89367 ) : TCTTTTT---TA-C-ACTT---TC----------------AACATCG-----------CATA-----GTGTGTTCCAGTTGTTAACCTTTGCTGTAATTTACACGTCGGGCAT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-TAAAAGTTGACAC----A--TGCCAATAAGTACCCT---AATATACAAGTGC--AATATA-------GAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGAGAA-GAAAGACATGT----AATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCAAGTCACG-------TGACTGTGAA-AGTGGACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAG-TTTTGTTTGTTTTATTCATTA-AAAATGTATCACTATATATTTAATCATAAAATGAAACAAGTATAGAACTGAATA
gi|89370 : TTTTTTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GCGTGTTCCAGTTGTTAACCTTTGCTGTAATTCACACGTCGCGCGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-TAAAAGTTGACAC----A--TGCCAATTAGTACCCT---AAT-------TGTT-AATA-A-------GAACTAATTGT--TATGCAAACTCCAGGTGAGGAAAGGAGAA-GAACGACATCT----AATCGAGAAA-AG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAA-AATGGACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAG-ATTTGTTTGTTTTTTTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTTTGGAA
gi|89368 : TTTTTTT---TA-C-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCATTTGTTAACCTTTGCTGTAATCCACATGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGCCAA-AAAGGGTTGACAC----A--TGCCAATTAGTACCCT---AATATACAAGTAC--GATAAA-------GAACTAATT-----ATGCAAACACCAGGTGAGGAAAGGAGAA-GAACGACATCT----AATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----TTGCAACGTCACG-------TGACTGTGAA-AATGGACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AAAATCTATCACCATCTATTTAATCATAAAATGAAACAAGTTTAGAAtata
gi|89369 : TTTTTTT---TA-C-ACTT---TC----------------GATATCG-----------CATA-----GTGCATTCCAGTTGTTAACCTTTGCTGTAGTTCACACGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGATAA-TAAGAGTTGACACACACA--TGCCAATTAGTACCCT---AATATACAAGTAC--AATAAA-------GAACTAATTGT--TATGCAAAAACCAGGTGAGGAAAGGAGAA-GAACGACATCT----AATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTTTAAATAACAATA----GTGTCACGTGACG-------TGAC--TGAA-AATGAACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AATATGTATCACCATATATTTAATCATGAAATGAAACAAGTTTAGAAgata
gi|89371 : TTTTTTT---TAAC-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCAGTTGTTTACCTTTGCTGTAATTCACACGTCGCACGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-TAAGAGGTGACAC----A--TGCCAATTAGTACCCT---AATATACAAGTAC--GTTATA-------GAACTAATTGT--TATGCAATCACCAGGTGAGGAAAGGAGAA-GAACGACATCT----ATTCCAGAAA-GG-------GTTTCAGAACGCAGG-ACGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGCGAA-AATGGACAGTAAAC--TAATGTGCGGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AAATTGTATCACgata
gi|89372 : TTTTTTT---TA-C-ACTT---TC----------------GACATCA-----------CATA-----GTGAGTTCCAGTTATTAACCTTTGCTGTAAT--ACACGTTGT-TGT--CAGGGTTTATG--ACACCCAGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACAAGTAC--GATATA-------GAACTAATTTT--TATGCAAAC-------------AGGAGAA-GTACAACATCT----AATCCAGAAA-GG-------GTTTCAGAACACAGGCCTAGTGTAAATAACAATA----GTATCACGTCACA-------TGACTGTGAA-AATGGACATTAAAC--CAATGTGCTGCGTCTTTTAAGAGATTTTTTTTGTTTTATTCGTTA-ACAA
gi|89373 : TTTTTTT---TA------T---TC----------------AACCTTG-----------CATA-----GAGCATTCCAGTTATTAACCTTTGCTGTAATAAACATATCGCGCGT--CAGGGTTTATC--GCACCCTGCAGTGCCAA-TACGAGTTAAAAC----A--TGCCAATTAGTACCCT---AATAAACAAGTAC--AATATA-------GAACTAATTGT--TATGCAAACACAAGGTGAGGAAAGAATAA-GTACGACATCT----AATCCAGAAATGGTTTGACCGTTTCAGATTGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCACG-------TAATGGTGAA-AATGGACAGTAAAC--CAATGTGCTGCACCTTTAAAGAA---------ATTTT---------------TATCAACATATATTTAATCATAAAGAGAAACAATTATTGA
gi|89375 : TTTTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCGGTTGTTAACCTTTGCAGTAATTCACACGTCGCGCGTGTCGGGGTTTATC--GCACCCCGCTGTGCCAA-CAACAGTTGACAC----A--TGCCAATTAGTACCTT---AATATACAAGTAC--AATATA-------ACACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGGAAA-GAACGACATCT----AATCCAGAAA-GG-------GTTTCAGAATGCAGGCCCAGTGTAAATAACAATT----GTGCCTTGTCACG-------TGACTGTGAA-AATGGACAGTAAGC--TAATGTGCTGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AAATTGTATCACCATATATTTTATCATTAAATGAAACAAGTATAGAATAGAATA
gi|89376 : tTTTT---TA-C-ACTT---TC----------------GCTATCG-----------CATA-----GTGTGTTCCAGTTGTTAATCTTTGCTGTAATTCACACATCTCGCGT--CAGGGTTTATC--GCGCCCTGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACAAGTAC--GATATA-------GAGCTAATTGT--TATGCAAACACCAGGTGAGGAAAGGAGAA-GAACGACATCT----AATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCA---CACG-------TGAC--TGAA-AATGGACAGTAAAC--TAATGTGCTGCGTCTTTTGAGAG-ATTTGTTTGATTTATTCATTA-ATAATGTATCAGCATATATTTAATCACAAAATGAAACAAGTATAGAATAGAATA
gi|89377 : TTTTGAATA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACATCTGCTATAATACACACGTC
gi|89378 : TTT---CA-C-AGCTAAATC----------------AACATCA-----------CATA-----GTGCATTCCAATTATTAACCTCTGATGTAATACACACGTCACGCAT--CAGGGTTTATC--TCACCCCACTGTGCCAA-TTAA----GACAC----A--TGCCAATTAGTACCCT---AATATACATATACCTAATATACGATATTGAACTAATTGT--TATACAAACAAGAGGTGAGAAAAGGAATA-GTACGAGTTTT----AATCCAGAAA-GA-------GTTTCAAAAGGCAGGCATACTGTAAATAACAATA----GTGCTACTTCACG-------TGAC--TGAT-AATGAATAGTTAAT--CAATGTGCTACGTCTTTTAATAG-ATACGTTTGTTTTATTCATAA-AAAATGTATCACCATATATTTGATCATAAAAAGAAACAAacgc
gi|89374 : TTT---TA-C-ACTT---TCTACATCCAGCTAAATTGACATCA-----------CATA-----GTGCGTTTCAGTTATTAACCTCTGCTGTCACACACACGTCGCATGT--CGGGGTTTATC--GCACCCCACTGT-------------TGACAC----A--TGCCATTTAGTACCCT---AATATACAAGTAC--AAGATT-------GAACTTATTGTTATATGCATACAAGAGGAGAGGAAAGGATAA-Gtaaaataaaaaa
gi|89379 : ttttaaTTT---TA-CCACTT---TC----------------CACATCAAGCTATATCTACATACCAAGGTGTGTTCCAGTTATTAACCTCTGCTGTAATACACAC-----ACGT--CA-ACTCTCTCCTGCA-TCAGCTGTGCTAATTAAGAGATGAAAC----A--TGCCAA
gi|89380 : TT---TA-C-ACTT---TG----------------GACATTG-----------CAAA-----GTGCATTCGAGTTATTAACCTCTGCTGTAATACACACGTCGCACTT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACAAGTAT--GATATT-------GAACTAATTGT--TATGCAAACAAGAGAAGTGGAAAGGAGAA-GTACGAGATCT----AATCCAGAAA-GG-------GGTTCAGAAGGCTGGCCTGCTGTAAAAAATAATAGTATGTGCCACATCACG-------TGACTGTGAT-AATGAACAGTAAATCATAATGTACTATGTCTTTTAAGAG-----ATTTGTTTTATTCATTA-AAAATGTATCACCATATAACTGATCATAAAGAGAAACA---ATAGAATAAAATA
gi|89381 : TT---TA-C-ACTT---TC----------------GGCATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATCCTGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACAAGTAT--GATATT-------GAACTAATTGT--TATGCAAACCAGAGGAAAGGAAAGGAGAA-GTACGAGATCT----AATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGAT-AATAAACATTAAAT--GAATGTGCTACGACTTTTAAGAG-ATTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAA
gi|89382 : TT---TA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACATCGCTTGT--TGGGGTATATC--ACACCTCGCTGTGCCAA-TAAGAATTGACAC----A--TGCCAATTAGTACCCT---GATATATAAGTAC--AATATT-------GAACTAATTGT--TATGCAAACCAGAGAAGAGGAAAGGAGAA-GTACGAGATCT----AATCCAGATA-GG-------GTTTCAGAAGGCAGGTCTGCAGTAAATAACAATAGTATGTGCCACATCATG-------TGACTGTGAT-AATGAACAGTAAAT--GAATGTGTTAAGACTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AAGATG----------------ATCATAAAGAGAAACA---ATAAAATTAAATA
gi|89383 : TT---TA-C-ACTT---TC----------------GAAATCC-----------CATA-----GTGCGTTCCAATAATTAACCTCTGCTGTAAAACACACGT----------------TATC--GCACCCCGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAATTAGTACCCTTAAAATATACAAGAAT--GATATT-------AAACTATTTGT--aaaaata
gi|89384 : TT---TA-C-ACTT---TT----------------GACATGG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACGTCGCTCGT--CAGGGCTT
gi|89385 : -ATTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTATAAAACACACGTCATGCGT--CA--------------CCCCGCTGTGCCAA-TAAGAGTTGACAC----ACATGCCAATTA-TACCCT---AATATACAAGTAC--GATATT-------GAACTAATTGA--TATGCAAACAAGAGGAGAGGAAATGAGAA-GTATGAGATCT----AATCCAGAAA-CG-------GTTTCAGAAGGTAGGCCTGCTGTAAATAACAATA----GTGACACATCACG-------TGACTGTGAT-AATGAACAGTAAAT--GAATTTGCTGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AAAATGTATCGCCAAATATTTGATCATAAAGAGAAACA---ATAGAATTAAATA
gi|89386 : TT---TC----------------GACATCG-----------CATA-----GTGCGTTCCTGTTGTTAACCTTTGAAGTAATTCACAAGTCGCGCGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-TCAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACAAGTAT--GATATA-------GAACTAATTGT--TATGTTAACACCAGGCGA-GAAAAGAGAA-GTACGACATAT----AATCCAGAAA-GG-------GTTTCAGGACGCAGGCCTGGTGTAAATAACAATA----GTGTCACGTCACG-------TGACTATGAA-AATGGACAGTAAAC---------------------------CTTGTTTGTTTTATTCATC--AAAATGTATCACCATATATTTAATCATAAAGAGAAACAATTATAAA
gi|89387 : TT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTTGTTAACCTTTGAAGAAATTCACAAGTCGCGTGA--CGGGGTTTATT--GCACCCCGCTGTGCCAA-TTAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACAAGTAC--GATATA-------GAACTAATTGT--TATGCAAACACCAGGTTAGGAAAAGAGAA-GTATGACATCT----AATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCATG-------TGACTATGAA-AATGGACAGTAAAC---------------------------CTTGTTTGTTTTATTTATC--AAAATGTATCACCAAATATTTAATCATAAAGAGAAACAATTATAGA
gi|89388 : TT---TC----------------GAC--TG-----------CATA-----GCGGGTTCCAGTTGTTTACCTTTGAAGTAATTCACAAGTCGCACGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACAAGTAC--GATATA-------GAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGAGAA-GTGTGACATCT----AATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTTGTGTAAATAACAATA----GTGCCATGTCACA-------TGACTCTGAA-ATTGGACATTAAAC----AT-----------------------TGTT----TTATTCA--ACAAAATGTATCACCATATATTTAATCATAAAGAGAAGC-AGTA
gi|89389 : GTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATTCCGCTGTGCCAA-TAAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACAAGTAT--GATATT-------GAACTAATTGT--TATGCAAACCAGAGGAGAGGAAAGGAGAA-GTACGATATCT----AATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGAT-AATAAACAGTAAAT--GAATGTGCTACGACTTTTAAGAG-ATTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAAataaagta
gi|89390 : TTCCAGTTATAAACCTTTTCTGTAATACACACGTCACGCGT--CAGTGTTTATC--GCAACCTGTTATGCCAA-TAAGAGTTGACAC----A--TGCCAATGAGTACCCT---AATATACAAGTAT--AATATT-------GAACTAATTGG--AATGCAAACAAGAGGAGAGGAAAGGAGAA-GTTTGAGGTCT----AATCCAGAAA-AG-------GTTACAGAAGGCAAGCATACTGTAAATAACCATA----GTGCTATATCACG-------TGACGGTGAT-AGTGAACAGTTAAT--CAATGTGCTACGTCTTTTAAGAG-ATTTGTTTGTTTAATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGCAACA---ATAGAA
gi|89391 : AGGTGAGGAAAGGAGAA-GTAGGACATCT----AATCCAGAAA-GG-------GTTTCAGAACGTAGTCCTGGTGTAAATAACAATA----GTGCCATATCACG-------TGAATGTGAA-AATGGACAGGAAAC--CAATTTGCTGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTT-AAAGTATATCGCCATAT-TTTGATCATAAAGAGAAACAATCATAGAAtaata
gi|89392 : GAGGAACAGATAATGAAATATG-GTCTAGAATCTAGAAA-GG-------GTTTCAGAAGGCAGGCCTGCTGTAAATAACAATAGTATGTGCCACATCACGATATATTTGATTATAAATAG-AAACAATAGAA--TAA
gi|89393 : GACATCT----AATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTAACG-------TGACTGTGAA-AATGGACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAG-ATTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTACAGAA
Alignments
lowQualScore : 1111111111111111 1111 11
lowQualScore : 44 333 2 2 333 2222222222222222 88888888888 44444 2 0 22 22 1 1 3333 22 333 66666666 1 2 22 33 1 3333 22 1 5555555 2 2 9999 5555555 22 888 1 1 0 11
lowQualScore : .. ... . . ... ................ ........... ..... . . .. .. . . .... .. ... ........ . . .. .. . .... .. . ....... . . .... ....... .. ... . . . ..
lowQualScore : 22 999 2 1 222 0000000000000000 66666666666 55555 6 6 44 55 8 8 9999 55 333 99999999 9 1 66 00 5 9999 55 8 9999999 0 5 3333 9999999 55 000 9 9 6 00
consensus : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATNGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
Reference ( family-680 ) : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTGT--TATGCAAACACNAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
gi|89367 : TCTT--TTT---TA-C-ACTT---TC----------------AACATCG-----------CATA-----GTGTGTTCCAGTTGTTAACCTTTGCTGTAATTTACACGTCGGGCAT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAAAGTTGACAC----A--TGCCAATAAGTACCCT---AATATACA--------A-GTGCAATATAGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGAAAGACATGTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCAAGTCACG-------TGACTGTGAAAGTGG--ACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAGT-TTTGTTTGTTTTATTCATTA-AAAATGTATCACTATATATTTAATCATAAAATGAAACAAGTATAGAACTGAATA
gi|89368 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCATTTGTTAACCTTTGCTGTAATCCACATGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGCCAA-A-AAGGGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATAAAGAACTAATT-----ATGCAAACACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----TTGCAACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATCTATCACCATCTATTTAATCATAAAATGAAACAAGTTTAGAA
gi|89369 : TTTT--TTT---TA-C-ACTT---TC----------------GATATCG-----------CATA-----GTGCATTCCAGTTGTTAACCTTTGCTGTAGTTCACACGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGATAA-T-AAGAGTTGACACACACA--TGCCAATTAGTACCCT---AATATACA--------A-GTACAATAAAGAACTAATTGT--TATGCAAAAACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTTTAAATAACAATA----GTGTCACGTGACG-------TGAC--TGAAAATGA--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AATATGTATCACCATATATTTAATCATGAAATGAAACAAGTTTAGAAgata
gi|89370 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GCGTGTTCCAGTTGTTAACCTTTGCTGTAATTCACACGTCGCGCGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAAAGTTGACAC----A--TGCCAATTAGTACCCT---AAT-T-------------GT-TAATA-AGAACTAATTGT--TATGCAAACTCCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCGAGAAA-AG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAGA-TTTGTTTGTTTTTTTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTTTGGAATAgata
gi|89371 : TTTT--TTT---TAAC-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCAGTTGTTTACCTTTGCTGTAATTCACACGTCGCACGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAGAGGTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGTTATAGAACTAATTGT--TATGCAATCACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--TTCCAGAAA-GG-------GTTTCAGAACGCAGGAC-GGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGCGAAAATGG--ACAGTAAAC--TAATGTGCGGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAATTGTATCACta
gi|89372 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCA-----------CATA-----GTGAGTTCCAGTTATTAACCTTTGCTGTAAT--ACACGTTGT-TGT--CAGGGTTTATG--ACACCCAGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTTT--TATGCAAAC-------------AGGA----GAAGTACAACATCTA--ATCCAGAAA-GG-------GTTTCAGAACACAGGCCTAGTGTAAATAACAATA----GTATCACGTCACA-------TGACTGTGAAAATGG--ACATTAAAC--CAATGTGCTGCGTCTTTTAAGAGATTTTTTTTGTTTTATTCGTTA-ACAA
gi|89373 : TTTT--TTT---TA------T---TC----------------AACCTTG-----------CATA-----GAGCATTCCAGTTATTAACCTTTGCTGTAATAAACATATCGCGCGT--CAGGGTTTATC--GCACCCTGCAGTGCCAA-T-ACGAGTTAAAAC----A--TGCCAATTAGTACCCT---AATAAACA--------A-GTACAATATAGAACTAATTGT--TATGCAAACACAAGGTGAGGAAAGAA----TAAGTACGACATCTA--ATCCAGAAATGGTTTGACCGTTTCAGATTGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCACG-------TAATGGTGAAAATGG--ACAGTAAAC--CAATGTGCTGCACCTTTAAAGAAA-TTT-T----------------------TATCAACATATATTTAATCATAAAGAGAAACAATTATTGA
gi|89374 : TTTTAATTT---TA-C-ACTT---TCTACATCCAGCTAAATTGACATCA-----------CATA-----GTGCGTTTCAGTTATTAACCTCTGCTGTCACACACACGTCGCATGT--CGGGGTTTATC--GCACCCCACT--------------GTTGACAC----A--TGCCATTTAGTACCCT---AATATACA--------A-GTACAAGATTGAACTTATTGTTATATGCATACAAGAGGAGAGGAAAGGA----TAAG
gi|89375 : TTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCGGTTGTTAACCTTTGCAGTAATTCACACGTCGCGCGTGTCGGGGTTTATC--GCACCCCGCTGTGCCAA-C-AACAGTTGACAC----A--TGCCAATTAGTACCTT---AATATACA--------A-GTACAATATAACACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGG----AAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCCAGTGTAAATAACAATT----GTGCCTTGTCACG-------TGACTGTGAAAATGG--ACAGTAAGC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAATTGTATCACCATATATTTTATCATTAAATGAAACAAGTATAGAATAGAATA
gi|89376 : T--TTT---TA-C-ACTT---TC----------------GCTATCG-----------CATA-----GTGTGTTCCAGTTGTTAATCTTTGCTGTAATTCACACATCTCGCGT--CAGGGTTTATC--GCGCCCTGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAGCTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCA---CACG-------TGAC--TGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTGAGAGA-TTTGTTTGATTTATTCATTA-ATAATGTATCAGCATATATTTAATCACAAAATGAAACAAGTATAGAATAGAATA
gi|89377 : T--TTTGAATA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACATCTGCTATAATACACACGTCACGC
gi|89378 : --TTT---CA-C-AGCTAAATC----------------AACATCA-----------CATA-----GTGCATTCCAATTATTAACCTCTGATGTAATACACACGTCACGCAT--CAGGGTTTATC--TCACCCCACTGTGCCAA-TTAAGA-----CAC----A--TGCCAATTAGTACCCT---AATATACATATACCTAATATACGATATTGAACTAATTGT--TATACAAACAAGAGGTGAGAAAAGGA----ATAGTACGAGTTTTA--ATCCAGAAA-GA-------GTTTCAAAAGGCAGGCATACTGTAAATAACAATA----GTGCTACTTCACG-------TGAC--TGATAATGA--ATAGTTAAT--CAATGTGCTACGTCTTTTAATAGA-TACGTTTGTTTTATTCATAA-AAAATGTATCACCATATATTTGATCATAAAAAGAAACA---ATAAAATAAAA
gi|89379 : --TTT---TA-CCACTT---TC----------------CACATCAAGCTATATCTACATACCAAGGTGTGTTCCAGTTATTAACCTCTGCTGTAATACACA-----CACGT--CA-ACTCTCTCCTGCA-TCAGCTGTGCTAATT-AAGAGATGAAAC----A--TGCCAAaa
gi|89380 : TT---TA-C-ACTT---TG----------------GACATTG-----------CAAA-----GTGCATTCGAGTTATTAACCTCTGCTGTAATACACACGTCGCACTT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACAAGAGAAGTGGAAAGGA----GAAGTACGAGATCTA--ATCCAGAAA-GG-------GGTTCAGAAGGCTGGCCTGCTGTAAAAAATAATAGTATGTGCCACATCACG-------TGACTGTGATAATGA--ACAGTAAATCATAATGTACTATGTCTTTTAAGAGA-----TTTGTTTTATTCATTA-AAAATGTATCACCATATAACTGATCATAAAGAGAAACA---ATAGAATAAAATA
gi|89381 : TT---TA-C-ACTT---TC----------------GGCATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATCCTGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACCAGAGGAAAGGAAAGGA----GAAGTACGAGATCTA--ATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGATAATAA--ACATTAAAT--GAATGTGCTACGACTTTTAAGAGA-TTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAA
gi|89382 : TT---TA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACATCGCTTGT--TGGGGTATATC--ACACCTCGCTGTGCCAA-T-AAGAATTGACAC----A--TGCCAATTAGTACCCT---GATATATA--------A-GTACAATATTGAACTAATTGT--TATGCAAACCAGAGAAGAGGAAAGGA----GAAGTACGAGATCTA--ATCCAGATA-GG-------GTTTCAGAAGGCAGGTCTGCAGTAAATAACAATAGTATGTGCCACATCATG-------TGACTGTGATAATGA--ACAGTAAAT--GAATGTGTTAAGACTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAGATG----------------ATCATAAAGAGAAACA---ATAAAATTAAATA
gi|89383 : TT---TA-C-ACTT---TC----------------GAAATCC-----------CATA-----GTGCGTTCCAATAATTAACCTCTGCTGTAAAACACACGT----------------TATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCTTAAAATATACA--------A-GAATGATATTAAACTATTTGT--aaaaata
gi|89384 : TT---TA-C-ACTT---TT----------------GACATGG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACGTCGCTCGT--CAGGGCTT
gi|89385 : -ATTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTATAAAACACACGTCATGCGT--CA--------------CCCCGCTGTGCCAA-T-AAGAGTTGACAC----ACATGCCAATTA-TACCCT---AATATACA--------A-GTACGATATTGAACTAATTGA--TATGCAAACAAGAGGAGAGGAAATGA----GAAGTATGAGATCTA--ATCCAGAAA-CG-------GTTTCAGAAGGTAGGCCTGCTGTAAATAACAATA----GTGACACATCACG-------TGACTGTGATAATGA--ACAGTAAAT--GAATTTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCGCCAAATATTTGATCATAAAGAGAAACA---ATAGAATTAAATA
gi|89386 : TT---TC----------------GACATCG-----------CATA-----GTGCGTTCCTGTTGTTAACCTTTGAAGTAATTCACAAGTCGCGCGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-T-CAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTATGATATAGAACTAATTGT--TATGTTAACACCAGGCGA-GAAAAGA----GAAGTACGACATATA--ATCCAGAAA-GG-------GTTTCAGGACGCAGGCCTGGTGTAAATAACAATA----GTGTCACGTCACG-------TGACTATGAAAATGG--ACAGTAAAC---------------------------CTTGTTTGTTTTATTCATC--AAAATGTATCACCATATATTTAATCATAAAGAGAAACAATTATAAA
gi|89387 : TT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTTGTTAACCTTTGAAGAAATTCACAAGTCGCGTGA--CGGGGTTTATT--GCACCCCGCTGTGCCAA-T-TAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTGT--TATGCAAACACCAGGTTAGGAAAAGA----GAAGTATGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCATG-------TGACTATGAAAATGG--ACAGTAAAC---------------------------CTTGTTTGTTTTATTTATC--AAAATGTATCACCAAATATTTAATCATAAAGAGAAACAATTATAGA
gi|89388 : TT---TC----------------GAC--TG-----------CATA-----GCGGGTTCCAGTTGTTTACCTTTGAAGTAATTCACAAGTCGCACGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTGTGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTTGTGTAAATAACAATA----GTGCCATGTCACA-------TGACTCTGAAATTGG--ACATTAAAC----AT-----------------------TGTT----TTATTCA--ACAAAATGTATCACCATATATTTAATCATAAAGAGAAGC-AGT----AATAAAGTA
gi|89389 : GTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATTCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACCAGAGGAGAGGAAAGGA----GAAGTACGATATCTA--ATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGATAATAA--ACAGTAAAT--GAATGTGCTACGACTTTTAAGAGA-TTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAA
gi|89390 : TTCCAGTTATAAACCTTTTCTGTAATACACACGTCACGCGT--CAGTGTTTATC--GCAACCTGTTATGCCAA-T-AAGAGTTGACAC----A--TGCCAATGAGTACCCT---AATATACA--------A-GTATAATATTGAACTAATTGG--AATGCAAACAAGAGGAGAGGAAAGGA----GAAGTTTGAGGTCTA--ATCCAGAAA-AG-------GTTACAGAAGGCAAGCATACTGTAAATAACCATA----GTGCTATATCACG-------TGACGGTGATAGTGA--ACAGTTAAT--CAATGTGCTACGTCTTTTAAGAGA-TTTGTTTGTTTAATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGCAACA---ATAGAATAA
gi|89391 : AGGTGAGGAAAGGA----GAAGTAGGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGTAGTCCTGGTGTAAATAACAATA----GTGCCATATCACG-------TGAATGTGAAAATGG--ACAGGAAAC--CAATTTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTT-AAAGTATATCGCCATAT-TTTGATCATAAAGAGAAACAATCATAGAAta
gi|89392 : GAGGAACAGATAATGAAATATGG--TCTAGAATCTAGAAA-GG-------GTTTCAGAAGGCAGGCCTGCTGTAAATAACAATAGTATGTGCCACATCACGATATATTTGATTAT--AAATAGAAACAATAGAA--TAA
gi|89393 : GACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTAACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTACAGAA
Alignments
lowQualScore : 1111111111111111 1111 11
lowQualScore : 44 333 2 2 333 2222222222222222 88888888888 44444 2 0 22 22 1 1 3333 22 333 66666666 1 1 22 33 1 3333 22 1 5555555 2 2 9999 5555555 22 888 1 1 0 11
lowQualScore : .. ... . . ... ................ ........... ..... . . .. .. . . .... .. ... ........ . . .. .. . .... .. . ....... . . .... ....... .. ... . . . ..
lowQualScore : 22 999 2 1 222 0000000000000000 66666666666 55555 6 6 44 55 8 8 9999 55 333 99999999 9 0 66 88 5 9999 55 8 9999999 0 5 3333 9999999 55 000 9 9 6 00
consensus : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATNGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
Reference ( family-680 ) : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATNGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
gi|89367 : TCTT--TTT---TA-C-ACTT---TC----------------AACATCG-----------CATA-----GTGTGTTCCAGTTGTTAACCTTTGCTGTAATTTACACGTCGGGCAT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAAAGTTGACAC----A--TGCCAATAAGTACCCT---AATATACA--------A-GTGCAATATAGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGAAAGACATGTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCAAGTCACG-------TGACTGTGAAAGTGG--ACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAGT-TTTGTTTGTTTTATTCATTA-AAAATGTATCACTATATATTTAATCATAAAATGAAACAAGTATAGAACTGAATA
gi|89368 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCATTTGTTAACCTTTGCTGTAATCCACATGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGCCAA-A-AAGGGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATAAAGAACTAATT-----ATGCAAACACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----TTGCAACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATCTATCACCATCTATTTAATCATAAAATGAAACAAGTTTAGAA
gi|89369 : TTTT--TTT---TA-C-ACTT---TC----------------GATATCG-----------CATA-----GTGCATTCCAGTTGTTAACCTTTGCTGTAGTTCACACGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGATAA-T-AAGAGTTGACACACACA--TGCCAATTAGTACCCT---AATATACA--------A-GTACAATAAAGAACTAATTGT--TATGCAAAAACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTTTAAATAACAATA----GTGTCACGTGACG-------TGAC--TGAAAATGA--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AATATGTATCACCATATATTTAATCATGAAATGAAACAAGTTTAGAAgata
gi|89370 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GCGTGTTCCAGTTGTTAACCTTTGCTGTAATTCACACGTCGCGCGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAAAGTTGACAC----A--TGCCAATTAGTACCCT---AAT-T-------------GT-TAATA-AGAACTAATTGT--TATGCAAACTCCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCGAGAAA-AG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAGA-TTTGTTTGTTTTTTTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTTTGGAATAgata
gi|89371 : TTTT--TTT---TAAC-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCAGTTGTTTACCTTTGCTGTAATTCACACGTCGCACGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAGAGGTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGTTATAGAACTAATTGT--TATGCAATCACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--TTCCAGAAA-GG-------GTTTCAGAACGCAGGAC-GGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGCGAAAATGG--ACAGTAAAC--TAATGTGCGGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAATTGTATCACta
gi|89372 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCA-----------CATA-----GTGAGTTCCAGTTATTAACCTTTGCTGTAAT--ACACGTTGT-TGT--CAGGGTTTATG--ACACCCAGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTTT--TATGCAAAC-------------AGGA----GAAGTACAACATCTA--ATCCAGAAA-GG-------GTTTCAGAACACAGGCCTAGTGTAAATAACAATA----GTATCACGTCACA-------TGACTGTGAAAATGG--ACATTAAAC--CAATGTGCTGCGTCTTTTAAGAGATTTTTTTTGTTTTATTCGTTA-ACAA
gi|89373 : TTTT--TTT---TA------T---TC----------------AACCTTG-----------CATA-----GAGCATTCCAGTTATTAACCTTTGCTGTAATAAACATATCGCGCGT--CAGGGTTTATC--GCACCCTGCAGTGCCAA-T-ACGAGTTAAAAC----A--TGCCAATTAGTACCCT---AATAAACA--------A-GTACAATATAGAACTAATTGT--TATGCAAACACAAGGTGAGGAAAGAA----TAAGTACGACATCTA--ATCCAGAAATGGTTTGACCGTTTCAGATTGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCACG-------TAATGGTGAAAATGG--ACAGTAAAC--CAATGTGCTGCACCTTTAAAGAAA-TTT-T----------------------TATCAACATATATTTAATCATAAAGAGAAACAATTATTGA
gi|89374 : TTTTAATTT---TA-C-ACTT---TCTACATCCAGCTAAATTGACATCA-----------CATA-----GTGCGTTTCAGTTATTAACCTCTGCTGTCACACACACGTCGCATGT--CGGGGTTTATC--GCACCCCACT--------------GTTGACAC----A--TGCCATTTAGTACCCT---AATATACA--------A-GTACAAGATTGAACTTATTGTTATATGCATACAAGAGGAGAGGAAAGGA----TAAG
gi|89375 : TTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCGGTTGTTAACCTTTGCAGTAATTCACACGTCGCGCGTGTCGGGGTTTATC--GCACCCCGCTGTGCCAA-C-AACAGTTGACAC----A--TGCCAATTAGTACCTT---AATATACA--------A-GTACAATATAACACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGG----AAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCCAGTGTAAATAACAATT----GTGCCTTGTCACG-------TGACTGTGAAAATGG--ACAGTAAGC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAATTGTATCACCATATATTTTATCATTAAATGAAACAAGTATAGAATAGAATA
gi|89376 : T--TTT---TA-C-ACTT---TC----------------GCTATCG-----------CATA-----GTGTGTTCCAGTTGTTAATCTTTGCTGTAATTCACACATCTCGCGT--CAGGGTTTATC--GCGCCCTGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAGCTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCA---CACG-------TGAC--TGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTGAGAGA-TTTGTTTGATTTATTCATTA-ATAATGTATCAGCATATATTTAATCACAAAATGAAACAAGTATAGAATAGAATA
gi|89377 : T--TTTGAATA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACATCTGCTATAATACACACGTCACGC
gi|89378 : --TTT---CA-C-AGCTAAATC----------------AACATCA-----------CATA-----GTGCATTCCAATTATTAACCTCTGATGTAATACACACGTCACGCAT--CAGGGTTTATC--TCACCCCACTGTGCCAA-TTAAGA-----CAC----A--TGCCAATTAGTACCCT---AATATACATATACCTAATATACGATATTGAACTAATTGT--TATACAAACAAGAGGTGAGAAAAGGA----ATAGTACGAGTTTTA--ATCCAGAAA-GA-------GTTTCAAAAGGCAGGCATACTGTAAATAACAATA----GTGCTACTTCACG-------TGAC--TGATAATGA--ATAGTTAAT--CAATGTGCTACGTCTTTTAATAGA-TACGTTTGTTTTATTCATAA-AAAATGTATCACCATATATTTGATCATAAAAAGAAACA---ATAAAATAAAA
gi|89379 : --TTT---TA-CCACTT---TC----------------CACATCAAGCTATATCTACATACCAAGGTGTGTTCCAGTTATTAACCTCTGCTGTAATACACA-----CACGT--CA-ACTCTCTCCTGCA-TCAGCTGTGCTAATT-AAGAGATGAAAC----A--TGCCAAaa
gi|89380 : TT---TA-C-ACTT---TG----------------GACATTG-----------CAAA-----GTGCATTCGAGTTATTAACCTCTGCTGTAATACACACGTCGCACTT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACAAGAGAAGTGGAAAGGA----GAAGTACGAGATCTA--ATCCAGAAA-GG-------GGTTCAGAAGGCTGGCCTGCTGTAAAAAATAATAGTATGTGCCACATCACG-------TGACTGTGATAATGA--ACAGTAAATCATAATGTACTATGTCTTTTAAGAGA-----TTTGTTTTATTCATTA-AAAATGTATCACCATATAACTGATCATAAAGAGAAACA---ATAGAATAAAATA
gi|89381 : TT---TA-C-ACTT---TC----------------GGCATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATCCTGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACCAGAGGAAAGGAAAGGA----GAAGTACGAGATCTA--ATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGATAATAA--ACATTAAAT--GAATGTGCTACGACTTTTAAGAGA-TTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAA
gi|89382 : TT---TA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACATCGCTTGT--TGGGGTATATC--ACACCTCGCTGTGCCAA-T-AAGAATTGACAC----A--TGCCAATTAGTACCCT---GATATATA--------A-GTACAATATTGAACTAATTGT--TATGCAAACCAGAGAAGAGGAAAGGA----GAAGTACGAGATCTA--ATCCAGATA-GG-------GTTTCAGAAGGCAGGTCTGCAGTAAATAACAATAGTATGTGCCACATCATG-------TGACTGTGATAATGA--ACAGTAAAT--GAATGTGTTAAGACTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAGATG----------------ATCATAAAGAGAAACA---ATAAAATTAAATA
gi|89383 : TT---TA-C-ACTT---TC----------------GAAATCC-----------CATA-----GTGCGTTCCAATAATTAACCTCTGCTGTAAAACACACGT----------------TATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCTTAAAATATACA--------A-GAATGATATTAAACTATTTGT--aaaaata
gi|89384 : TT---TA-C-ACTT---TT----------------GACATGG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACGTCGCTCGT--CAGGGCTT
gi|89385 : -ATTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTATAAAACACACGTCATGCGT--CA--------------CCCCGCTGTGCCAA-T-AAGAGTTGACAC----ACATGCCAATTA-TACCCT---AATATACA--------A-GTACGATATTGAACTAATTGA--TATGCAAACAAGAGGAGAGGAAATGA----GAAGTATGAGATCTA--ATCCAGAAA-CG-------GTTTCAGAAGGTAGGCCTGCTGTAAATAACAATA----GTGACACATCACG-------TGACTGTGATAATGA--ACAGTAAAT--GAATTTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCGCCAAATATTTGATCATAAAGAGAAACA---ATAGAATTAAATA
gi|89386 : TT---TC----------------GACATCG-----------CATA-----GTGCGTTCCTGTTGTTAACCTTTGAAGTAATTCACAAGTCGCGCGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-T-CAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTATGATATAGAACTAATTGT--TATGTTAACACCAGGCGA-GAAAAGA----GAAGTACGACATATA--ATCCAGAAA-GG-------GTTTCAGGACGCAGGCCTGGTGTAAATAACAATA----GTGTCACGTCACG-------TGACTATGAAAATGG--ACAGTAAAC---------------------------CTTGTTTGTTTTATTCATC--AAAATGTATCACCATATATTTAATCATAAAGAGAAACAATTATAAA
gi|89387 : TT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTTGTTAACCTTTGAAGAAATTCACAAGTCGCGTGA--CGGGGTTTATT--GCACCCCGCTGTGCCAA-T-TAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTGT--TATGCAAACACCAGGTTAGGAAAAGA----GAAGTATGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCATG-------TGACTATGAAAATGG--ACAGTAAAC---------------------------CTTGTTTGTTTTATTTATC--AAAATGTATCACCAAATATTTAATCATAAAGAGAAACAATTATAGA
gi|89388 : TT---TC----------------GAC--TG-----------CATA-----GCGGGTTCCAGTTGTTTACCTTTGAAGTAATTCACAAGTCGCACGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTGTGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTTGTGTAAATAACAATA----GTGCCATGTCACA-------TGACTCTGAAATTGG--ACATTAAAC----AT-----------------------TGTT----TTATTCA--ACAAAATGTATCACCATATATTTAATCATAAAGAGAAGC-AGT----AATAAAGTA
gi|89389 : GTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATTCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACCAGAGGAGAGGAAAGGA----GAAGTACGATATCTA--ATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGATAATAA--ACAGTAAAT--GAATGTGCTACGACTTTTAAGAGA-TTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAA
gi|89390 : TTCCAGTTATAAACCTTTTCTGTAATACACACGTCACGCGT--CAGTGTTTATC--GCAACCTGTTATGCCAA-T-AAGAGTTGACAC----A--TGCCAATGAGTACCCT---AATATACA--------A-GTATAATATTGAACTAATTGG--AATGCAAACAAGAGGAGAGGAAAGGA----GAAGTTTGAGGTCTA--ATCCAGAAA-AG-------GTTACAGAAGGCAAGCATACTGTAAATAACCATA----GTGCTATATCACG-------TGACGGTGATAGTGA--ACAGTTAAT--CAATGTGCTACGTCTTTTAAGAGA-TTTGTTTGTTTAATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGCAACA---ATAGAATAA
gi|89391 : AGGTGAGGAAAGGA----GAAGTAGGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGTAGTCCTGGTGTAAATAACAATA----GTGCCATATCACG-------TGAATGTGAAAATGG--ACAGGAAAC--CAATTTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTT-AAAGTATATCGCCATAT-TTTGATCATAAAGAGAAACAATCATAGAAta
gi|89392 : GAGGAACAGATAATGAAATATGG--TCTAGAATCTAGAAA-GG-------GTTTCAGAAGGCAGGCCTGCTGTAAATAACAATAGTATGTGCCACATCACGATATATTTGATTAT--AAATAGAAACAATAGAA--TAA
gi|89393 : GACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTAACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTACAGAA
blockSeqs : AA GAA A C AAA TACATCCAGCTAAATT AGCTATATCTA CCAAG C GT CT T T ACAC CA TAA TATACCTA T A TA CC T TAAT GA T TTTGACC C C GTAT ATATATT AA CAT T C AG
blockSeqs : . . . . . . . . T . . . . . . . . . A . CC T . . . . C C GTAC . . T . . AG
blockSeqs : . . . . . . . . T . . . . . . . . . A . CC T . . . . C C GTAT . . T . . AG
blockSeqs : . . . . . . . . T . . . . . . . . . A . CC T . . . . C T GTAC . . T . . AT
blockSeqs : . . . . . . . . A . . . . . . . . . A . CA T . . . . C T GTAT . . T . . AG
blockSeqs : . . . . . . . . A . . . . . . . . . A . AG A . . . . T C . . . C . . AG
blockSeqs : . . . . . . . . T . . . . . . . . . T . CC T . . . . T C . . . C . . AT
blockSeqs : . . . . . . . . T . . . . . . . . . A . CC T . . . . C T . . . T . . AT
blockSeqs : . . . . . . . . A . . . . . . . . . A . AG T . . . . G T . . . T . . AG
blockSeqs : . . . . . . . . A . . . . . . . . . T . AG A . . . . G T . . . C . . AT
blockSeqs : . . . . . . . . A . . . . . . . . . T . AG A . . . . G T . . . G . . AG
blockSeqs : . . . . . . . . A . . . . . . . . . T . AG A . . . . G T . . . G . . A
blockSeqs : . . . . . . . G . . . . . . . . . T . AG A . . . . G T . . . G . . A
blockSeqs : . . . . . . . A . . . . . . . . . T . CC C . . . . C T . . . G . . .
blockSeqs : . . . . . . . A . . . . . . . . . T . CC T . . . . T T . . . C . . .
blockSeqs : . . . . . . . A . . . . . . . . . A . CC T . . . . T T . . . C . . .
blockSeqs : . . . . . . . A . . . . . . . . . A . AG A . . . . G T . . . T . . .
blockSeqs : . . . . . T . . . . . . . . . A . AG A . . . . G T . . . T . . .
blockSeqs : . . . . T . . . . . . . . . T . . T . . . . C T . . . . . .
blockSeqs : . . . . T . . . . . . . . . T . . . . . . G C . . . . . .
blockSeqs : . . . . G . . . . . . . . . . C . . . . .
blockSeqs : A .
blockSeqs : .
blockSeqCons :
originalCons : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATNGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
finalCons : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATNGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
Alignments
lowQualScore : 1111111111111111 1111 11
lowQualScore : 44 333 2 2 333 2222222222222222 88888888888 44444 2 0 22 22 1 1 3333 22 333 66666666 1 1 22 33 1 3333 22 1 5555555 2 2 9999 5555555 22 888 1 1 0 11
lowQualScore : .. ... . . ... ................ ........... ..... . . .. .. . . .... .. ... ........ . . .. .. . .... .. . ....... . . .... ....... .. ... . . . ..
lowQualScore : 22 999 2 1 222 0000000000000000 66666666666 55555 6 6 44 55 8 8 9999 55 333 99999999 9 0 66 88 5 9999 55 8 9999999 0 5 3333 9999999 55 000 9 9 6 00
consensus : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATNGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
Reference ( family-680 ) : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTTATTAACCTCTGCTGTAATNCACACGTCGCGCGT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATNGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGAAACAAGTATAGAATAAAATA
gi|89367 : TCTT--TTT---TA-C-ACTT---TC----------------AACATCG-----------CATA-----GTGTGTTCCAGTTGTTAACCTTTGCTGTAATTTACACGTCGGGCAT--CAGGGTTTATC--GCACCCCGCTGTGCCAA-T-AAAAGTTGACAC----A--TGCCAATAAGTACCCT---AATATACA--------A-GTGCAATATAGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGAAAGACATGTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCAAGTCACG-------TGACTGTGAAAGTGG--ACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAGT-TTTGTTTGTTTTATTCATTA-AAAATGTATCACTATATATTTAATCATAAAATGAAACAAGTATAGAACTGAATA
gi|89368 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCATTTGTTAACCTTTGCTGTAATCCACATGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGCCAA-A-AAGGGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATAAAGAACTAATT-----ATGCAAACACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----TTGCAACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATCTATCACCATCTATTTAATCATAAAATGAAACAAGTTTAGAA
gi|89369 : TTTT--TTT---TA-C-ACTT---TC----------------GATATCG-----------CATA-----GTGCATTCCAGTTGTTAACCTTTGCTGTAGTTCACACGTCGCGCGT--CAGGATTTATC--GCACCCCGCTGTGATAA-T-AAGAGTTGACACACACA--TGCCAATTAGTACCCT---AATATACA--------A-GTACAATAAAGAACTAATTGT--TATGCAAAAACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTTTAAATAACAATA----GTGTCACGTGACG-------TGAC--TGAAAATGA--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AATATGTATCACCATATATTTAATCATGAAATGAAACAAGTTTAGAAgata
gi|89370 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GCGTGTTCCAGTTGTTAACCTTTGCTGTAATTCACACGTCGCGCGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAAAGTTGACAC----A--TGCCAATTAGTACCCT---AAT-T-------------GT-TAATA-AGAACTAATTGT--TATGCAAACTCCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCGAGAAA-AG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCTTCTTTTAAGAGA-TTTGTTTGTTTTTTTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTTTGGAATAgata
gi|89371 : TTTT--TTT---TAAC-ACTT---TC----------------GACATCG-----------CACA-----GTGCGTTCCAGTTGTTTACCTTTGCTGTAATTCACACGTCGCACGT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAGAGGTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGTTATAGAACTAATTGT--TATGCAATCACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--TTCCAGAAA-GG-------GTTTCAGAACGCAGGAC-GGTGTAAATAACAATA----GTGCCACGTCACG-------TGACTGCGAAAATGG--ACAGTAAAC--TAATGTGCGGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAATTGTATCACta
gi|89372 : TTTT--TTT---TA-C-ACTT---TC----------------GACATCA-----------CATA-----GTGAGTTCCAGTTATTAACCTTTGCTGTAAT--ACACGTTGT-TGT--CAGGGTTTATG--ACACCCAGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTTT--TATGCAAAC-------------AGGA----GAAGTACAACATCTA--ATCCAGAAA-GG-------GTTTCAGAACACAGGCCTAGTGTAAATAACAATA----GTATCACGTCACA-------TGACTGTGAAAATGG--ACATTAAAC--CAATGTGCTGCGTCTTTTAAGAGATTTTTTTTGTTTTATTCGTTA-ACAA
gi|89373 : TTTT--TTT---TA------T---TC----------------AACCTTG-----------CATA-----GAGCATTCCAGTTATTAACCTTTGCTGTAATAAACATATCGCGCGT--CAGGGTTTATC--GCACCCTGCAGTGCCAA-T-ACGAGTTAAAAC----A--TGCCAATTAGTACCCT---AATAAACA--------A-GTACAATATAGAACTAATTGT--TATGCAAACACAAGGTGAGGAAAGAA----TAAGTACGACATCTA--ATCCAGAAATGGTTTGACCGTTTCAGATTGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCACG-------TAATGGTGAAAATGG--ACAGTAAAC--CAATGTGCTGCACCTTTAAAGAAA-TTT-T----------------------TATCAACATATATTTAATCATAAAGAGAAACAATTATTGA
gi|89374 : TTTTAATTT---TA-C-ACTT---TCTACATCCAGCTAAATTGACATCA-----------CATA-----GTGCGTTTCAGTTATTAACCTCTGCTGTCACACACACGTCGCATGT--CGGGGTTTATC--GCACCCCACT--------------GTTGACAC----A--TGCCATTTAGTACCCT---AATATACA--------A-GTACAAGATTGAACTTATTGTTATATGCATACAAGAGGAGAGGAAAGGA----TAAG
gi|89375 : TTT--TTT---TA-C-ACTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCGGTTGTTAACCTTTGCAGTAATTCACACGTCGCGCGTGTCGGGGTTTATC--GCACCCCGCTGTGCCAA-C-AACAGTTGACAC----A--TGCCAATTAGTACCTT---AATATACA--------A-GTACAATATAACACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGG----AAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCCAGTGTAAATAACAATT----GTGCCTTGTCACG-------TGACTGTGAAAATGG--ACAGTAAGC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAATTGTATCACCATATATTTTATCATTAAATGAAACAAGTATAGAATAGAATA
gi|89376 : T--TTT---TA-C-ACTT---TC----------------GCTATCG-----------CATA-----GTGTGTTCCAGTTGTTAATCTTTGCTGTAATTCACACATCTCGCGT--CAGGGTTTATC--GCGCCCTGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAGCTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGAACGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCA---CACG-------TGAC--TGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTGAGAGA-TTTGTTTGATTTATTCATTA-ATAATGTATCAGCATATATTTAATCACAAAATGAAACAAGTATAGAATAGAATA
gi|89377 : T--TTTGAATA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACATCTGCTATAATACACACGTCACGC
gi|89378 : --TTT---CA-C-AGCTAAATC----------------AACATCA-----------CATA-----GTGCATTCCAATTATTAACCTCTGATGTAATACACACGTCACGCAT--CAGGGTTTATC--TCACCCCACTGTGCCAA-TTAAGA-----CAC----A--TGCCAATTAGTACCCT---AATATACATATACCTAATATACGATATTGAACTAATTGT--TATACAAACAAGAGGTGAGAAAAGGA----ATAGTACGAGTTTTA--ATCCAGAAA-GA-------GTTTCAAAAGGCAGGCATACTGTAAATAACAATA----GTGCTACTTCACG-------TGAC--TGATAATGA--ATAGTTAAT--CAATGTGCTACGTCTTTTAATAGA-TACGTTTGTTTTATTCATAA-AAAATGTATCACCATATATTTGATCATAAAAAGAAACA---ATAAAATAAAA
gi|89379 : --TTT---TA-CCACTT---TC----------------CACATCAAGCTATATCTACATACCAAGGTGTGTTCCAGTTATTAACCTCTGCTGTAATACACA-----CACGT--CA-ACTCTCTCCTGCA-TCAGCTGTGCTAATT-AAGAGATGAAAC----A--TGCCAAaa
gi|89380 : TT---TA-C-ACTT---TG----------------GACATTG-----------CAAA-----GTGCATTCGAGTTATTAACCTCTGCTGTAATACACACGTCGCACTT--CAGGGTTTATC--ACACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACAAGAGAAGTGGAAAGGA----GAAGTACGAGATCTA--ATCCAGAAA-GG-------GGTTCAGAAGGCTGGCCTGCTGTAAAAAATAATAGTATGTGCCACATCACG-------TGACTGTGATAATGA--ACAGTAAATCATAATGTACTATGTCTTTTAAGAGA-----TTTGTTTTATTCATTA-AAAATGTATCACCATATAACTGATCATAAAGAGAAACA---ATAGAATAAAATA
gi|89381 : TT---TA-C-ACTT---TC----------------GGCATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATCCTGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACCAGAGGAAAGGAAAGGA----GAAGTACGAGATCTA--ATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGATAATAA--ACATTAAAT--GAATGTGCTACGACTTTTAAGAGA-TTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAA
gi|89382 : TT---TA-C-ACTT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACATCGCTTGT--TGGGGTATATC--ACACCTCGCTGTGCCAA-T-AAGAATTGACAC----A--TGCCAATTAGTACCCT---GATATATA--------A-GTACAATATTGAACTAATTGT--TATGCAAACCAGAGAAGAGGAAAGGA----GAAGTACGAGATCTA--ATCCAGATA-GG-------GTTTCAGAAGGCAGGTCTGCAGTAAATAACAATAGTATGTGCCACATCATG-------TGACTGTGATAATGA--ACAGTAAAT--GAATGTGTTAAGACTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAGATG----------------ATCATAAAGAGAAACA---ATAAAATTAAATA
gi|89383 : TT---TA-C-ACTT---TC----------------GAAATCC-----------CATA-----GTGCGTTCCAATAATTAACCTCTGCTGTAAAACACACGT----------------TATC--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCTTAAAATATACA--------A-GAATGATATTAAACTATTTGT--aaaaata
gi|89384 : TT---TA-C-ACTT---TT----------------GACATGG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTGTAATACACACGTCGCTCGT--CAGGGCTT
gi|89385 : -ATTT---TC----------------GACATCG-----------CATA-----GTGCGTTCCAGTAATTAACCTCTGCTATAAAACACACGTCATGCGT--CA--------------CCCCGCTGTGCCAA-T-AAGAGTTGACAC----ACATGCCAATTA-TACCCT---AATATACA--------A-GTACGATATTGAACTAATTGA--TATGCAAACAAGAGGAGAGGAAATGA----GAAGTATGAGATCTA--ATCCAGAAA-CG-------GTTTCAGAAGGTAGGCCTGCTGTAAATAACAATA----GTGACACATCACG-------TGACTGTGATAATGA--ACAGTAAAT--GAATTTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCGCCAAATATTTGATCATAAAGAGAAACA---ATAGAATTAAATA
gi|89386 : TT---TC----------------GACATCG-----------CATA-----GTGCGTTCCTGTTGTTAACCTTTGAAGTAATTCACAAGTCGCGCGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-T-CAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTATGATATAGAACTAATTGT--TATGTTAACACCAGGCGA-GAAAAGA----GAAGTACGACATATA--ATCCAGAAA-GG-------GTTTCAGGACGCAGGCCTGGTGTAAATAACAATA----GTGTCACGTCACG-------TGACTATGAAAATGG--ACAGTAAAC---------------------------CTTGTTTGTTTTATTCATC--AAAATGTATCACCATATATTTAATCATAAAGAGAAACAATTATAAA
gi|89387 : TT---TC----------------GACATTG-----------CATA-----GTGCGTTCCAGTTGTTAACCTTTGAAGAAATTCACAAGTCGCGTGA--CGGGGTTTATT--GCACCCCGCTGTGCCAA-T-TAGAGTTGATGC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTGT--TATGCAAACACCAGGTTAGGAAAAGA----GAAGTATGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTGGTGTAAATAACAATA----GTGCCACGTCATG-------TGACTATGAAAATGG--ACAGTAAAC---------------------------CTTGTTTGTTTTATTTATC--AAAATGTATCACCAAATATTTAATCATAAAGAGAAACAATTATAGA
gi|89388 : TT---TC----------------GAC--TG-----------CATA-----GCGGGTTCCAGTTGTTTACCTTTGAAGTAATTCACAAGTCGCACGT--CAGGGTTTATT--GCACCCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAATTAGTACCCT---AATATACA--------A-GTACGATATAGAACTAATTGT--TATGCAAACACCAGGTGAGGAAAGGA----GAAGTGTGACATCTA--ATCCAGAAA-GG-------GTTTCAGAATGCAGGCCTTGTGTAAATAACAATA----GTGCCATGTCACA-------TGACTCTGAAATTGG--ACATTAAAC----AT-----------------------TGTT----TTATTCA--ACAAAATGTATCACCATATATTTAATCATAAAGAGAAGC-AGT----AATAAAGTA
gi|89389 : GTTCCAGTAATTAACCTCTGCTGTAATGCACACATCGCTCGT--CAGGGTTTATC--GCATTCCGCTGTGCCAA-T-AAGAGTTGACAC----A--TGCCAGTTAGTACCCT---AATATACA--------A-GTATGATATTGAACTAATTGT--TATGCAAACCAGAGGAGAGGAAAGGA----GAAGTACGATATCTA--ATCCAGAAA-GG-------GTTTCAGAAGTCAGGCCTGCAGTAAATAACAACAGTACGTGCCACATCACG-------TGACTGTGATAATAA--ACAGTAAAT--GAATGTGCTACGACTTTTAAGAGA-TTTGTTTGTTTT----ATTA-AAAATG----------------ATCATAAAGAGAAACAA-TATAAA
gi|89390 : TTCCAGTTATAAACCTTTTCTGTAATACACACGTCACGCGT--CAGTGTTTATC--GCAACCTGTTATGCCAA-T-AAGAGTTGACAC----A--TGCCAATGAGTACCCT---AATATACA--------A-GTATAATATTGAACTAATTGG--AATGCAAACAAGAGGAGAGGAAAGGA----GAAGTTTGAGGTCTA--ATCCAGAAA-AG-------GTTACAGAAGGCAAGCATACTGTAAATAACCATA----GTGCTATATCACG-------TGACGGTGATAGTGA--ACAGTTAAT--CAATGTGCTACGTCTTTTAAGAGA-TTTGTTTGTTTAATTCATTA-AAAATGTATCACCATATATTTAATCATAAAGAGCAACA---ATAGAATAA
gi|89391 : AGGTGAGGAAAGGA----GAAGTAGGACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGTAGTCCTGGTGTAAATAACAATA----GTGCCATATCACG-------TGAATGTGAAAATGG--ACAGGAAAC--CAATTTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTT-AAAGTATATCGCCATAT-TTTGATCATAAAGAGAAACAATCATAGAAta
gi|89392 : GAGGAACAGATAATGAAATATGG--TCTAGAATCTAGAAA-GG-------GTTTCAGAAGGCAGGCCTGCTGTAAATAACAATAGTATGTGCCACATCACGATATATTTGATTAT--AAATAGAAACAATAGAA--TAA
gi|89393 : GACATCTA--ATCCAGAAA-GG-------GTTTCAGAACGCAGGCCCGGTGTAAATAACAATA----GTGCCACGTAACG-------TGACTGTGAAAATGG--ACAGTAAAC--TAATGTGCTGCGTCTTTTAAGAGA-TTTGTTTGTTTTATTCATTA-AAAATGTATCACCATATATTTAATCATAAAATGAAACAAGTACAGAA