lowQualScore                  :                       444444    2    1   0              5   
lowQualScore                  :                       ......    .    .   .              .   
lowQualScore                  :                       444444    7    5   2              1   
consensus                     : TCTATATGTCGCCATACTAGCA------ACGTGAAGG-ATACCAAGACGTTAGTTTCATG
Reference ( gi|39363 )        : TCTATATGTCGCCATACTAGCA------ACGTAAAGG-ATACCAAGACGTTAGTTTTATG
gi|39364                      : TTTATATGTCGCCATACTAGCA------ACGTTAAGG-ATACCAAGACGTTAGTTTCATG
gi|39366                      : TCTATATGTCGCCATACTAGTT------ACGTGAAGG-ATACCAAGACGTTAGTTTCATG
gi|39365                      : TCAATATGTCGCCATACTAGTA------ACGTGAAGG-ATACCAAGACGTTAGTTTCATG
gi|39367                      : TCTATATTTCGCCATACTAACA------ACGCGAAGG-ATACCAAGACGTTAGTTTCATG
gi|39368                      : TCTATATGTCGCCATACTAACA------ACGCGAAGG-ATACCAAGACATTAGTTT
gi|39371                      : TCTATATGTCGGCGTACTAGCA------ACATAAAGG-ATACCAAGACGCTGGTTTCATGcctg
gi|39370                      : TCTATTTGTCGCCATACTAGCA------ACGTGAAAG-ATACCGAGACGTTAATTTAATG
gi|39372                      : TCTATATGTCGATATACTAGTA------ACATTAAGG-ATACCAAGACGTTAGTTTAATG
gi|39369                      : TCTATATGTCGCCAAACTAGCA------ACGTGAAAA-ATACCAA-ACGTTAGTTTCATG
gi|39373                      : TCTATATGTCGCCATAATAGCA------TCGCGAAGG-ATACCAAGACGATAGTGTTATG
gi|39375                      : TCTCTATACCGCCATACTAGCA------ACGTAAAGG-ATA-CGATACGTTAGTTTCATG
gi|39381                      : TCTAAATGTTGCAATACTACTA------ACGTAAAGG-ATATCAAGACGTTAGTATCATG
gi|39383                      : TCTATATCTTGTCATATAAGCA------GCGTAAAGG-TTTCCAAGACGTTAGTTTTATG
gi|39376                      : TCTATATGTTGCCATACTAGTA------ACGTGACAG-ATTACAATACGTTAGTTTCATG
gi|39374                      : TCTATTTCTTGCCATACCAGTA------ACGTGAATG-ATAACAAGACGTTAGTTTCATG
gi|39377                      : TCTATATGTTACCATTCTTGCA------ACGTGAAGG-ATA-CAAGACATTAGTTCCATG
gi|39378                      : TCTATATACCACCATAATAGTACATGTAACGTGAAGG-ATGCCAAGACGTTAGTTTCATG
gi|39379                      : TCTATTTGTTGCCATACTAGTA------TCGTGAATG-TTACCAAGAGGTTAGTTTCATG
gi|39384                      : TCTATATCTTGTCATATAAGCA------ACGTAAAGG-TTTCCAAGTTGTTAGTTTTATG
gi|39380                      : TCTACATGTTACCATTCTTGCA------ACTTGAAGG-ATACCACGATGTTAGTTTCATG
gi|39382                      : TTTATATGATGCTAAAGTAGTA------ACGTGAATG-ATACCAACACGTTAGTTTCATG
gi|39385                      : TCTATATGTCGCTATAATAGCT------ACCTTGAGGAATA-AAAGACGTTGGTTTCAT
gi|39386                      :  CTATATGTCGCCATACTAGCA------ACATAAAGG-ATACCAAGATGTTAATTTCATG
gi|39387                      :  CTATATGTCGCCATATTAGCA------ATGCAAATG-ATAACAAGACGTCAGTTTCATG
gi|39388                      :  CTACATGTTGCCATACCATCA------GCGTAAAGG-ATACTAAGACGTAAATTTCATG
gi|39389                      :       TGTTGCCTTACTAGTA------TCGTGAATG-TTAGCAAGACGTTAGTTTCATG

lowQualScore                  :                      1 444444                               
lowQualScore                  :                      . ......                               
lowQualScore                  :                      5 333333                               
consensus                     : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
Reference ( family-678 )      : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39363                      : TCTATATGTCGCCATACTAGC-A------ACGTAAAGGATACCAAGACGTTAGTTTTATG
gi|39364                      : TTTATATGTCGCCATACTAGC-A------ACGTTAAGGATACCAAGACGTTAGTTTCATG
gi|39365                      : TCAATATGTCGCCATACTAGT-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39366                      : TCTATATGTCGCCATACTAGT-T------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39367                      : TCTATATTTCGCCATACTAAC-A------ACGCGAAGGATACCAAGACGTTAGTTTCATG
gi|39368                      : TCTATATGTCGCCATACTAAC-A------ACGCGAAGGATACCAAGACATTAGTTTCCTG
gi|39369                      : TCTATATGTCGCCAAACTAGC-A------ACGTGAAAAATACCAA-ACGTTAGTTTCATG
gi|39370                      : TCTATTTGTCGCCATACTAGC-A------ACGTGAAAGATACCGAGACGTTAATTTAATG
gi|39371                      : TCTATATGTCGGCGTACTAGC-A------ACATAAAGGATACCAAGACGCTGGTTTCATG
gi|39372                      : TCTATATGTCGATATACTAGT-A------ACATTAAGGATACCAAGACGTTAGTTTAATG
gi|39373                      : TCTATATGTCGCCATAATAGC-A------TCGCGAAGGATACCAAGACGATAGTGTTATG
gi|39374                      : TCTATTTCTTGCCATACCAGT-A------ACGTGAATGATAACAAGACGTTAGTTTCATG
gi|39375                      : TCTCTATACCGCCATACTAGC-A------ACGTAAAGGATA-CGATACGTTAGTTTCATG
gi|39376                      : TCTATATGTTGCCATACTAGT-A------ACGTGACAGATTACAATACGTTAGTTTCATG
gi|39377                      : TCTATATGTTACCATTCTTGC-A------ACGTGAAGGATA-CAAGACATTAGTTCCATG
gi|39378                      : TCTATATACCACCATAATAGT-ACATGTAACGTGAAGGATGCCAAGACGTTAGTTTCATG
gi|39379                      : TCTATTTGTTGCCATACTAGT-A------TCGTGAATGTTACCAAGAGGTTAGTTTCATG
gi|39380                      : TCTACATGTTACCATTCTTGC-A------ACTTGAAGGATACCACGATGTTAGTTTCATG
gi|39381                      : TCTAAATGTTGCAATACTACT-A------ACGTAAAGGATATCAAGACGTTAGTATCATG
gi|39382                      : TTTATATGATGCTAAAGTAGT-A------ACGTGAATGATACCAACACGTTAGTTTCATG
gi|39383                      : TCTATATCTTGTCATATAAGC-A------GCGTAAAGGTTTCCAAGACGTTAGTTTTATG
gi|39384                      : TCTATATCTTGTCATATAAGC-A------ACGTAAAGGTTTCCAAGTTGTTAGTTTTATG
gi|39385                      : TCTATATGTCGCTATAATAGCTA------CCTTGAGGAATA-AAAGACGTTGGTTTCAT
gi|39386                      :  CTATATGTCGCCATACTAGC-A------ACATAAAGGATACCAAGATGTTAATTTCATG
gi|39387                      :  CTATATGTCGCCATATTAGC-A------ATGCAAATGATAACAAGACGTCAGTTTCATG
gi|39388                      :  CTACATGTTGCCATACCATC-A------GCGTAAAGGATACTAAGACGTAAATTTCATG
gi|39389                      :       TGTTGCCTTACTAGT-A------TCGTGAATGTTAGCAAGACGTTAGTTTCATG

lowQualScore                  :                      1 444444                               
lowQualScore                  :                      . ......                               
lowQualScore                  :                      5 333333                               
consensus                     : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
Reference ( family-678 )      : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39363                      : TCTATATGTCGCCATACTAGC-A------ACGTAAAGGATACCAAGACGTTAGTTTTATG
gi|39364                      : TTTATATGTCGCCATACTAGC-A------ACGTTAAGGATACCAAGACGTTAGTTTCATG
gi|39365                      : TCAATATGTCGCCATACTAGT-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39366                      : TCTATATGTCGCCATACTAGT-T------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39367                      : TCTATATTTCGCCATACTAAC-A------ACGCGAAGGATACCAAGACGTTAGTTTCATG
gi|39368                      : TCTATATGTCGCCATACTAAC-A------ACGCGAAGGATACCAAGACATTAGTTTCCTG
gi|39369                      : TCTATATGTCGCCAAACTAGC-A------ACGTGAAAAATACCAA-ACGTTAGTTTCATG
gi|39370                      : TCTATTTGTCGCCATACTAGC-A------ACGTGAAAGATACCGAGACGTTAATTTAATG
gi|39371                      : TCTATATGTCGGCGTACTAGC-A------ACATAAAGGATACCAAGACGCTGGTTTCATG
gi|39372                      : TCTATATGTCGATATACTAGT-A------ACATTAAGGATACCAAGACGTTAGTTTAATG
gi|39373                      : TCTATATGTCGCCATAATAGC-A------TCGCGAAGGATACCAAGACGATAGTGTTATG
gi|39374                      : TCTATTTCTTGCCATACCAGT-A------ACGTGAATGATAACAAGACGTTAGTTTCATG
gi|39375                      : TCTCTATACCGCCATACTAGC-A------ACGTAAAGGATA-CGATACGTTAGTTTCATG
gi|39376                      : TCTATATGTTGCCATACTAGT-A------ACGTGACAGATTACAATACGTTAGTTTCATG
gi|39377                      : TCTATATGTTACCATTCTTGC-A------ACGTGAAGGATA-CAAGACATTAGTTCCATG
gi|39378                      : TCTATATACCACCATAATAGT-ACATGTAACGTGAAGGATGCCAAGACGTTAGTTTCATG
gi|39379                      : TCTATTTGTTGCCATACTAGT-A------TCGTGAATGTTACCAAGAGGTTAGTTTCATG
gi|39380                      : TCTACATGTTACCATTCTTGC-A------ACTTGAAGGATACCACGATGTTAGTTTCATG
gi|39381                      : TCTAAATGTTGCAATACTACT-A------ACGTAAAGGATATCAAGACGTTAGTATCATG
gi|39382                      : TTTATATGATGCTAAAGTAGT-A------ACGTGAATGATACCAACACGTTAGTTTCATG
gi|39383                      : TCTATATCTTGTCATATAAGC-A------GCGTAAAGGTTTCCAAGACGTTAGTTTTATG
gi|39384                      : TCTATATCTTGTCATATAAGC-A------ACGTAAAGGTTTCCAAGTTGTTAGTTTTATG
gi|39385                      : TCTATATGTCGCTATAATAGCTA------CCTTGAGGAATA-AAAGACGTTGGTTTCAT
gi|39386                      :  CTATATGTCGCCATACTAGC-A------ACATAAAGGATACCAAGATGTTAATTTCATG
gi|39387                      :  CTATATGTCGCCATATTAGC-A------ATGCAAATGATAACAAGACGTCAGTTTCATG
gi|39388                      :  CTACATGTTGCCATACCATC-A------GCGTAAAGGATACTAAGACGTAAATTTCATG
gi|39389                      :       TGTTGCCTTACTAGT-A------TCGTGAATGTTAGCAAGACGTTAGTTTCATG


blockSeqs                     :                      T CATGTA
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
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blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     
blockSeqs                     :                      . .     


blockSeqCons                  : 
originalCons                  : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
finalCons                     : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG

lowQualScore                  :                      1 444444                               
lowQualScore                  :                      . ......                               
lowQualScore                  :                      5 333333                               
consensus                     : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
Reference ( family-678 )      : TCTATATGTCGCCATACTAGC-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39363                      : TCTATATGTCGCCATACTAGC-A------ACGTAAAGGATACCAAGACGTTAGTTTTATG
gi|39364                      : TTTATATGTCGCCATACTAGC-A------ACGTTAAGGATACCAAGACGTTAGTTTCATG
gi|39365                      : TCAATATGTCGCCATACTAGT-A------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39366                      : TCTATATGTCGCCATACTAGT-T------ACGTGAAGGATACCAAGACGTTAGTTTCATG
gi|39367                      : TCTATATTTCGCCATACTAAC-A------ACGCGAAGGATACCAAGACGTTAGTTTCATG
gi|39368                      : TCTATATGTCGCCATACTAAC-A------ACGCGAAGGATACCAAGACATTAGTTTCCTG
gi|39369                      : TCTATATGTCGCCAAACTAGC-A------ACGTGAAAAATACCAA-ACGTTAGTTTCATG
gi|39370                      : TCTATTTGTCGCCATACTAGC-A------ACGTGAAAGATACCGAGACGTTAATTTAATG
gi|39371                      : TCTATATGTCGGCGTACTAGC-A------ACATAAAGGATACCAAGACGCTGGTTTCATG
gi|39372                      : TCTATATGTCGATATACTAGT-A------ACATTAAGGATACCAAGACGTTAGTTTAATG
gi|39373                      : TCTATATGTCGCCATAATAGC-A------TCGCGAAGGATACCAAGACGATAGTGTTATG
gi|39374                      : TCTATTTCTTGCCATACCAGT-A------ACGTGAATGATAACAAGACGTTAGTTTCATG
gi|39375                      : TCTCTATACCGCCATACTAGC-A------ACGTAAAGGATA-CGATACGTTAGTTTCATG
gi|39376                      : TCTATATGTTGCCATACTAGT-A------ACGTGACAGATTACAATACGTTAGTTTCATG
gi|39377                      : TCTATATGTTACCATTCTTGC-A------ACGTGAAGGATA-CAAGACATTAGTTCCATG
gi|39378                      : TCTATATACCACCATAATAGT-ACATGTAACGTGAAGGATGCCAAGACGTTAGTTTCATG
gi|39379                      : TCTATTTGTTGCCATACTAGT-A------TCGTGAATGTTACCAAGAGGTTAGTTTCATG
gi|39380                      : TCTACATGTTACCATTCTTGC-A------ACTTGAAGGATACCACGATGTTAGTTTCATG
gi|39381                      : TCTAAATGTTGCAATACTACT-A------ACGTAAAGGATATCAAGACGTTAGTATCATG
gi|39382                      : TTTATATGATGCTAAAGTAGT-A------ACGTGAATGATACCAACACGTTAGTTTCATG
gi|39383                      : TCTATATCTTGTCATATAAGC-A------GCGTAAAGGTTTCCAAGACGTTAGTTTTATG
gi|39384                      : TCTATATCTTGTCATATAAGC-A------ACGTAAAGGTTTCCAAGTTGTTAGTTTTATG
gi|39385                      : TCTATATGTCGCTATAATAGCTA------CCTTGAGGAATA-AAAGACGTTGGTTTCAT
gi|39386                      :  CTATATGTCGCCATACTAGC-A------ACATAAAGGATACCAAGATGTTAATTTCATG
gi|39387                      :  CTATATGTCGCCATATTAGC-A------ATGCAAATGATAACAAGACGTCAGTTTCATG
gi|39388                      :  CTACATGTTGCCATACCATC-A------GCGTAAAGGATACTAAGACGTAAATTTCATG
gi|39389                      :       TGTTGCCTTACTAGT-A------TCGTGAATGTTAGCAAGACGTTAGTTTCATG