lowQualScore : 11111111111 11111111111 111111 1 444444444444444444444 111111 111111 1111 33333333
lowQualScore : 4 5 77 99 1 9 99 55555555555 55555555555 5 666666 44 2 000000000000000000000 3 111111 222222 1111 44 88 22 55555555 44 7
lowQualScore : . . .. .. . . .. ........... ........... . ...... .. . ..................... . ...... ...... .... .. .. .. ........ .. .
lowQualScore : 0 7 66 22 2 9 22 88888888888 88888888888 2 888888 66 5 999999999999999999999 0 333333 000000 1111 11 11 00 99999999 11 0
consensus : TATAATAAA-TGCATTTGTTACGTAAAATAAAACNACTAAATCGTA--AGTATANTGCCCA--TG-----------CAT-----------GCACGTTNATTTATTTTTGTTTTAAATTTAT----TTATTT--TACATCAAAAGTCAA-------GATC----------CAGAAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTAATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAACTGG
Reference ( gi|32064 ) : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTA--AGTATATTGCCCA--TG-----------CAT-----------GCACGTTGATTTATTTTTGTTTTAAATTTAT----TCATTT--TACTTCAAAAGTCAA-------GACC----------CAGAAT-GC-----CAGCTGTGGTAAA-----TTGACAGCCCT--AGATACACATCCCTTAATA--C--G--TG--------T--GTCACACTTTCTACCATTCACTCAGTACTGG
gi|32065 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTA--AGTATATTGCCCA--TG-----------CAT-----------GCATGTTGATTTATTTTTATTTTAAATTTAT----TTATTT--TACATCAAAAGTCAA-------GATC----------CAGAAT-GC-----CAGCTGTGATAAC-----TTGACAGCCCT--AGATACACATCCCTTAATA--C--G--TG--------T--GTCACACTTTCTACCATTCAATCAGTACTGG
gi|32067 : TATAATAAA-TGCATATGTTAC---------------TAAATCGTA--AGTATATTGCCCA--TG-----------CAT-----------GCACGTTGATTTATTTTTGTTTTAAATTTAT----TTATTT--TACATCAAAAGTCAA-------GATC----------CAGAAT-GC-----CAGCTGTGGTAAA-----TTGACAGCCCT--AAATACACATCCCTTAATA--C--A--TG--------T--GTCACACTTTCTACCATTCACTCAGTACTGG
gi|32068 : TATAATAAA-TGCATTTGATACCGAAAATAAAACAACTAAATCGTA--AGTATA------A--TG-----------CAT-----------GCACGTTGATTTATTTTTGTTTTAAATTTAT----TTATTT--TACATCAAAAGTCAC-------GATC----------CAGAAT-GC-----CAGCTGTGGTAAA-----TTGACAGCCGT--AGGTTCATATCCCTTAATA--CATG--TA--------T--GTCATACTTTCTACCATTCACTCAGTACTGG
gi|32069 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTTAATCATA--AGTATAATGCCCA--TG-----------CAT-----------GCATGTTCATTTATTTTTGTTTTAAATTTAT----TTATTT--TACATCAAGAGTCAA-------TATC----------CAGAAT-GC-----CAGCTGTGGTAAA-----TTGACAG----------------CCCTTAATA--A--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGTACTGG
gi|32070 : TATGATAAC-TGCATTTGTTATGTAAAATAAAACCACTAAATCGTA--AGTTTAATGCCTA--TG-----------CAT-----------GCACGTTTATTTATTGTTGTTTTAAATTCAT----TTAGCT--TACATCAAAATTCAA-------CATC----------CAGAAT-GC-----TAGTTGTGGTAAA-----TTTACAGCCCTGAAAATACACATTCCTTAATATGC--G--TA--------T--GTCACACTTTCTACCATTCACTCATTACTGG
gi|32071 : TAAAATTAA-TGCATATGTTACATAAAATAAAACCACTAAATCGTA--AGTATAATGCCCA--TG-----------CAT-----------GCATGTTTATTTATTTGTGTTTTAAATTTAT----T--TTTCATACATCCAAAGTCAA-------TATC----------CAGAAA-GC-----CAGCTGTGGTAAA-----ATGACTGCCCT--GACTACACATCCCTTAATA--G--G--TGTA------T--GTCACACTTTCTACCATATACTCAGTACTGG
gi|32072 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACTGCTAAATCAAA--AGTTTAATGCCCA--TA-----------AATAAATAATAAATGCACATTTGTTTATTTCTGTTTTAAATTCAT----TTACTT--TACATCAAAAGTCAA-------TATC----------CAGAAT-GC-----TAGTTTTGGTAAA-----TTGTCAGCCCT--GAATACACATTCCTTAATATGC--G--TA--------T--GTCACATTTTCGACCATTCACTCAGTAATGG
gi|32066 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACCACTACATCGTA--A------TGCCCA--TGAATAAATAATAAAT-----------GCACGTTTATTTTTTTTTTTTTTAATTTCAT----TTATTT--TACATCAAAAGTCAA-------TATC----------CAGAAT-GC-----TAGTTGTGGTAAATTGTCTTGTCAGCCCT--GAATACACATCGCTTAATA--C--GCATA--------T--GTCACACTTTCTACC-TTCACTCAGTGCTGG
gi|32073 : TAATAAAATGCATTTGTTACATAAAATAAAACAACTAAATCATA--AGTATAATGTCCA--TG-----------CAT-----------GCACGTTGATTTATTTTTGT-------------------TT--TA------AATTCAA-------GATC----------CAGAAT-GC-----CACCTGTGGTAAA-----TTGACAGCCCT--AGATACACATCCCTTAATA--T--G--TGTA------T--GTCACACTTTCTTCCATTCACTCAGTACTGG
gi|32074 : AA-TGTATA-ATTAC-TGCAATAAAATCACTAAATCGTA--AGTATAGAGCCCA--TG-----------CAT-----------GCACGTTTATTTATTTTTGTTTTAAATTTAT----TTATTT--TACATCAAAAGTCAA-------AATT----------CAGAAT-GC-----CAGTTGTGGTAAA-----TTGTCAGCCCT--GAATACAGATCCGTTAATA--A--G--TGTATATTTTT--GTCACACTTTATACCATTCACTCAGTACTGG
gi|32075 : AAATAAAATA-CTACATTTTACAAGGA-ATTATTTAAACA-----------CAT-----------GT-CTTTAATTTTTATTAGTTTTAAAATTGTAGGATTGTTT--TATTTTGTAAGTTAACAATTCTGATCTGTTTTTATACGAAATCGCTATGGCAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTTATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32076 : AAATAAAATA-CTACATTTTACAAGGA-ATTATTTAAATA-----------CAT-----------GT-CTTTAATTTTTATTAGTTTTAAAATTGTAGGATTGTTT--TATTTTGTAAATTAACAATTCTGATCTGTTTTTATACGAAATCGCTATAGCAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTTATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32082 : AT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTAATA--C--G--TGTA------T--GTCACACTTTCTACCATTCATTCAGAACTGG
gi|32086 : ttgttttattttgtaaattaacaattctgatctgttttttatacgaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTAATA--C--G--TG--------TAAGTCACACTTTCTACCATTCACTCAAAACTGG
gi|32087 : gttttagttttatctgttttttatacgaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTTATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAACTGG
gi|32085 : AT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTAATA--T--G--TGTA------T--GTCACACTTTCTACCATTCATTCAGAACTGG
gi|32083 : attctaatttttagttgtatctgtttttatatgaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTTATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32088 : ttgttttattttgtaaattaacaattctgatctgttttttatacgaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTAATA--A--G--TGTA------T--GTCACACTTTCTACCATTCATTCAGAACTGG
gi|32077 : AT-GG-----CAGCTGTGTTAAA-----ATGACAGCCCT--GAATACACATCCCTTTATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAACTGG
gi|32089 : tgtacgattgttttattttttaaattaacaattctgatctgttttttatacgaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--CAATACACATCCCTTAATA--CCTG--TA--------T--GTCACACTTTCTACCATTCATTCAGAACTG
gi|32081 : AT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATATACATCCCTTAATA--C--G--TGTA------T--GTCACACTTTCTACCAGTCATTCAGAACTGG
gi|32091 : ttgttttattttgtaaattaacaattctgatctgttttttataagaaatcactAT-GG-----TAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTTATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32090 : AT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATATACATCCCTTTATA--C--G--TGTA------T--GTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32080 : AT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTAATA--C--G--TGTA------T--GTTGCACTTTCTACCATTAATTCAGAACTGG
gi|32078 : tgtaaatttacaattctgatttttagttgtatctgttttttatacaaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACACCCCTTAATA--CATG--TA--------T--GTCACACTTTCTACAGTTCATTCAGAACTAG
gi|32084 : tgtatgattgttttattttgtaaattaacaattatgatctgtttttttatacgaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACAGCCCT--GAATACACATCCCTTAATA--CATG--TA--------T--GTCACACTTT----CATTCA
gi|32079 : ttgttttattttgtaaattaacaattctgatctgttttttatacgaaatcgctAT-GG-----CAGCTGTGGTAAA-----ATGACA----------------CCCCTTAATA--C--G--TG--------TATGTTACACTTTCTACAATTCATTCAGAACTAG
Alignments
lowQualScore : 11111111111 11111111111 222222222222222222222222
lowQualScore : 3 4 22 88 0 5 88 44444444444 33333333333 2 1 33 2 666 66 8888 9999 2 6 4 222222222222222222222222 9999999 333333 22 444444 1
lowQualScore : . . .. .. . . .. ........... ........... . . .. . ... .. .... .... . . . ........................ ....... ...... .. ...... .
lowQualScore : 6 3 99 55 4 1 55 66666666666 66666666666 7 0 22 2 999 11 4444 4444 2 7 3 888888888888888888888888 3333333 999999 00 111111 6
consensus : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTA--AGTATANTGCCCA--TG-----------CAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
Reference ( family-664 ) : TATAATAAA-TGCATTTGTTACGTAAAATAAAACNACTAAATCGTA--AGTATANTGCCCA--TG-----------CAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32064 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTA--AGTATATTGCCCA--TG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TCATTTT-ACTT-CAAAAGTCAA-------GACCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32065 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTA--AGTATATTGCCCA--TG-----------CAT-----------GCATG-TTGATTTAT--TTTTA-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGATAAC-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCAATCAGTACTGG
gi|32066 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACCACTACATCGTA--A------TGCCCA--TGAATAAATAATAAAT-----------GCACG-TTTATTTTT--TTTTT-TT---TTAA--TTT-C--AT----TTATTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTGTGGTAAATTGTCTTGTCAGCCCTG--AATACACATCGCTTAATACGCATA------TGTCACACTTTCTACC-TTCACTCAGTGCTGG
gi|32067 : TATAATAAA-TGCATATGTTAC---------------TAAATCGTA--AGTATATTGCCCA--TG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--AATACACATCCCTTAATACATG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32068 : TATAATAAA-TGCATTTGATACCGAAAATAAAACAACTAAATCGTA--AGTATA------A--TG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAC-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCGTA--GGTTCATATCCCTTAATACATGTA------TGTCATACTTTCTACCATTCACTCAGTACTGG
gi|32069 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTTAATCATA--AGTATAATGCCCA--TG-----------CAT-----------GCATG-TTCATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAGAGTCAA-------TATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAG----------------CCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32070 : TATGATAAC-TGCATTTGTTATGTAAAATAAAACCACTAAATCGTA--AGTTTAATGCCTA--TG-----------CAT-----------GCACG-TTTATTTAT--TGTTG-TT---TTAA--ATT-C--AT----TTAGCTT-ACAT-CAAAATTCAA-------CATCCA---------GAA-------TGCTAGTTGTGGTAAA-----TTTACAGCCCTGAAAATACACATTCCTTAATATGCGTA------TGTCACACTTTCTACCATTCACTCATTACTGG
gi|32071 : TAAAATTAA-TGCATATGTTACATAAAATAAAACCACTAAATCGTA--AGTATAATGCCCA--TG-----------CAT-----------GCATG-TTTATTTAT--TTGTG-TT---TTAA--ATT-T--AT----TTTTCAT-ACAT-CCAAAGTCAA-------TATCCA---------GAA-------AGCCAGCTGTGGTAAA-----ATGACTGCCCTG--ACTACACATCCCTTAATAGGTGTA------TGTCACACTTTCTACCATATACTCAGTACTGG
gi|32072 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACTGCTAAATCAAA--AGTTTAATGCCCA--TA-----------AATAAATAATAAATGCACA-TTTGTTTAT--TTCTG-TT---TTAA--ATT-C--AT----TTACTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTTTGGTAAA-----TTGTCAGCCCTG--AATACACATTCCTTAATATGCGTA------TGTCACATTTTCGACCATTCACTCAGTAATGG
gi|32073 : TAATAAAATGCATTTGTTACATAAAATAAAACAACTAAATCATA--AGTATAATGTCCA--TG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT------------------------------CAA-------GATCCA---------GAA-------TGCCACCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATATGTGTA------TGTCACACTTTCTTCCATTCACTCAGTACTGG
gi|32074 : AA-TGTATA-ATTAC-TGCAATAAAATCACTAAATCGTA--AGTATAGAGCCCA--TG-----------CAT-----------GCACG-TTTATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------AATTCA---------GAA-------TGCCAGTTGTGGTAAA-----TTGTCAGCCCTG--AATACAGATCCGTTAATAAGTGTATATTTTTGTCACACTTTATACCATTCACTCAGTACTGG
gi|32075 : AAATAAAA-TACTACATTTTACAAGGA-ATTATTTAAACA-----------CAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAGTTAACAATTCTGATCTGTTTTTATACGAAATCGCTATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32076 : AAATAAAA-TACTACATTTTACAAGGA-ATTATTTAAATA-----------CAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAATTAACAATTCTGATCTGTTTTTATACGAAATCGCTATAGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32077 : T-----------GTACGATTGTTTTAT--TTTT---TAAATTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGTTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32078 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACACCCCTTAATACATGTA------TGTCACACTTTCTACAGTTCATTCAGAACTAG
gi|32079 : tgtatgattgttttattttgtaaattaacaattatgatctgtttttttatacgaaatcgctA-------TGGCAGCTGTGGTAAA-----ATGACA----------------CCCCTTAATACGTGTA------TGTTACACTTTCTACAATTCATTCAGAACTAG
gi|32080 : tgtatgattgttttattttgtaaattaacaattctgatctgtttttttatacgaaatcgttG-TAAATTTACAATTCTGATT---TTTA--GTTGT--AT----CTGTTTT-TTATACAAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTTGCACTTTCTACCATTAATTCAGAACTGG
gi|32081 : tTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTAT-AAGAAATCA-----------CTA-------------------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTAATACGTGTA------TGTCACACTTTCTACCAGTCATTCAGAACTGG
gi|32082 : ttgtA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32083 : ttgttttattttgtaaattaacaattctgatctgttttttatacgaaatcgctA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32084 : ttgttttattttgtaaattaacaattctgatctgttttttatacgaaatcgctA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACATGTA------TGTCACACTTT----CATTCA
gi|32085 : ttgttttattttgtaaattaacaattctgatctgttttttatacgaaatcgctAT--TCTAA-TT---TTTA--GTTGT--AT----CTGTTTTTATAT-GAAA--TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATATGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32086 : G-TT---TTAG--TTT-T--AT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------AGTCACACTTTCTACCATTCACTCAAAACTGG
gi|32087 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32088 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32089 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTC--AATACACATCCCTTAATACCTGTA------TGTCACACTTTCTACCATTCATTCAGAACTG
gi|32090 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32091 : A-------TGGTAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
Alignments
lowQualScore : 11111111111 11111111111 111 11 1111 1 4444444444444444444444444444444444
lowQualScore : 3 4 2 5 44444444444 33333333333 2 1 22 4 1 333 22 3333 7777 2 1 8 0 1 8888888888888888888888888888888888 333333 22 444444 1
lowQualScore : . . . . ........... ........... . . .. . . ... .. .... .... . . . . . .................................. ...... .. ...... .
lowQualScore : 6 3 8 8 66666666666 66666666666 7 0 88 7 9 888 00 8888 4444 8 7 7 2 7 8888888888888888888888888888888888 999999 00 111111 6
consensus : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATG-----------CAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
Reference ( family-664 ) : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATANTGCCCATG-----------CAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32064 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TCATTTT-ACTT-CAAAAGTCAA-------GACCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32065 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATG-----------CAT-----------GCATG-TTGATTTAT--TTTTA-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGATAAC-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCAATCAGTACTGG
gi|32066 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACCACTACATCGTAA------TGCCCATGAATAAATAATAAAT-----------GCACG-TTTATTTTT--TTTTT-TT---TTAA--TTT-C--AT----TTATTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTGTGGTAAATTGTCTTGTCAGCCCTG--AATACACATCGCTTAATACGCATA------TGTCACACTTTCTACC-TTCACTCAGTGCTGG
gi|32067 : TATAATAAA-TGCATATGTTAC---------------TAAATCGTAAGTATATTGCCCATG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--AATACACATCCCTTAATACATG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32068 : TATAATAAA-TGCATTTGATACCGAAAATAAAACAACTAAATCGTAAGTATA------ATG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAC-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCGTA--GGTTCATATCCCTTAATACATGTA------TGTCATACTTTCTACCATTCACTCAGTACTGG
gi|32069 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTTAATCATAAGTATAATGCCCATG-----------CAT-----------GCATG-TTCATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAGAGTCAA-------TATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAG----------------CCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32070 : TATGATAAC-TGCATTTGTTATGTAAAATAAAACCACTAAATCGTAAGTTTAATGCCTATG-----------CAT-----------GCACG-TTTATTTAT--TGTTG-TT---TTAA--ATT-C--AT----TTAGCTT-ACAT-CAAAATTCAA-------CATCCA---------GAA-------TGCTAGTTGTGGTAAA-----TTTACAGCCCTGAAAATACACATTCCTTAATATGCGTA------TGTCACACTTTCTACCATTCACTCATTACTGG
gi|32071 : TAAAATTAA-TGCATATGTTACATAAAATAAAACCACTAAATCGTAAGTATAATGCCCATG-----------CAT-----------GCATG-TTTATTTAT--TTGTG-TT---TTAA--ATT-T--AT----TTTTCAT-ACAT-CCAAAGTCAA-------TATCCA---------GAA-------AGCCAGCTGTGGTAAA-----ATGACTGCCCTG--ACTACACATCCCTTAATAGGTGTA------TGTCACACTTTCTACCATATACTCAGTACTGG
gi|32072 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACTGCTAAATCAAAAGTTTAATGCCCATA-----------AATAAATAATAAATGCACA-TTTGTTTAT--TTCTG-TT---TTAA--ATT-C--AT----TTACTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTTTGGTAAA-----TTGTCAGCCCTG--AATACACATTCCTTAATATGCGTA------TGTCACATTTTCGACCATTCACTCAGTAATGG
gi|32073 : TAATAAAATGCATTTGTTACATAAAATAAAACAACTAAATCATAAGTATAATGTCCATG-----------CAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT------------------------------CAA-------GATCCA---------GAA-------TGCCACCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATATGTGTA------TGTCACACTTTCTTCCATTCACTCAGTACTGG
gi|32074 : AA-TGTATA-ATTAC-TGCAATAAAATCACTAAATCGTAAGTATAGAGCCCATG-----------CAT-----------GCACG-TTTATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------AATTCA---------GAA-------TGCCAGTTGTGGTAAA-----TTGTCAGCCCTG--AATACAGATCCGTTAATAAGTGTATATTTTTGTCACACTTTATACCATTCACTCAGTACTGG
gi|32075 : -----------CAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAGTTAACAATTCTGATCTGTTTTTATACGAAATCGCTATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32076 : aaataaaatactacattttacaaggaattatttaaacaATA-----------CAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAATTAACAATTCTGATCTGTTTTTATACGAAATCGCTATAGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32077 : aaataaaatactacattttacaaggaattatttaaT-----------GTACGATTGTTTTAT--TTTT---TAAATTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGTTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32078 : --ATC-T--GT----TT-TTTT-ATA--CGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACACCCCTTAATACATGTA------TGTCACACTTTCTACAGTTCATTCAGAACTAG
gi|32079 : tgtatgattgttttattttgtaaattaacaattatg--ATC-T--GT----TT-TTTT-ATA--CGAAA-TC---------GTT--------------A-------TGGCAGCTGTGGTAAA-----ATGACA----------------CCCCTTAATACGTGTA------TGTTACACTTTCTACAATTCATTCAGAACTAG
gi|32080 : tgtatgattgttttattttgtaaattaacaattctgG-TAAATTTACAATTCTGATT---TTTA--GTTGT--AT----CTGTTTT-TTAT-ACAAAATC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTTGCACTTTCTACCATTAATTCAGAACTGG
gi|32081 : tTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTAT-AAGAAATCA-----------CTA-------------------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTAATACGTGTA------TGTCACACTTTCTACCAGTCATTCAGAACTGG
gi|32082 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32083 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32084 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACATGTA------TGTCACACTTT----CATTCA
gi|32085 : ttgtAT--TCTAA-TT---TTTA--GTTGT--AT----CTGTTTTTATAT--GAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATATGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32086 : G-TT---TTAG--TTT-T--AT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------AGTCACACTTTCTACCATTCACTCAAAACTGG
gi|32087 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32088 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32089 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTC--AATACACATCCCTTAATACCTGTA------TGTCACACTTTCTACCATTCATTCAGAACTG
gi|32090 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32091 : A-------TGGTAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
Alignments
lowQualScore : 22222222222 111 11 1111 1 4444444444444444444444444444444444
lowQualScore : 3 4 2 1 77777777777 2 1 22 4 1 333 22 3333 7777 2 1 8 0 1 8888888888888888888888888888888888 333333 22 444444 1
lowQualScore : . . . . ........... . . .. . . ... .. .... .... . . . . . .................................. ...... .. ...... .
lowQualScore : 6 3 8 6 11111111111 7 0 88 7 9 888 00 8888 4444 8 7 7 2 7 8888888888888888888888888888888888 999999 00 111111 6
consensus : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
Reference ( family-664 ) : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32064 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TCATTTT-ACTT-CAAAAGTCAA-------GACCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32065 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATGCAT-----------GCATG-TTGATTTAT--TTTTA-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGATAAC-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCAATCAGTACTGG
gi|32066 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACCACTACATCGTAA------TGCCCATGAATAAATAATAAATGCACG-TTTATTTTT--TTTTT-TT---TTAA--TTT-C--AT----TTATTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTGTGGTAAATTGTCTTGTCAGCCCTG--AATACACATCGCTTAATACGCATA------TGTCACACTTTCTACC-TTCACTCAGTGCTGG
gi|32067 : TATAATAAA-TGCATATGTTAC---------------TAAATCGTAAGTATATTGCCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--AATACACATCCCTTAATACATG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32068 : TATAATAAA-TGCATTTGATACCGAAAATAAAACAACTAAATCGTAAGTATAATGC------AT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAC-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCGTA--GGTTCATATCCCTTAATACATGTA------TGTCATACTTTCTACCATTCACTCAGTACTGG
gi|32069 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTTAATCATAAGTATAATGCCCATGCAT-----------GCATG-TTCATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAGAGTCAA-------TATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAG----------------CCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32070 : TATGATAAC-TGCATTTGTTATGTAAAATAAAACCACTAAATCGTAAGTTTAATGCCTATGCAT-----------GCACG-TTTATTTAT--TGTTG-TT---TTAA--ATT-C--AT----TTAGCTT-ACAT-CAAAATTCAA-------CATCCA---------GAA-------TGCTAGTTGTGGTAAA-----TTTACAGCCCTGAAAATACACATTCCTTAATATGCGTA------TGTCACACTTTCTACCATTCACTCATTACTGG
gi|32071 : TAAAATTAA-TGCATATGTTACATAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCATG-TTTATTTAT--TTGTG-TT---TTAA--ATT-T--AT----TTTTCAT-ACAT-CCAAAGTCAA-------TATCCA---------GAA-------AGCCAGCTGTGGTAAA-----ATGACTGCCCTG--ACTACACATCCCTTAATAGGTGTA------TGTCACACTTTCTACCATATACTCAGTACTGG
gi|32072 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACTGCTAAATCAAAAGTTTAATGCCCATAAATAAATAATAAATGCACA-TTTGTTTAT--TTCTG-TT---TTAA--ATT-C--AT----TTACTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTTTGGTAAA-----TTGTCAGCCCTG--AATACACATTCCTTAATATGCGTA------TGTCACATTTTCGACCATTCACTCAGTAATGG
gi|32073 : TAATAAAATGCATTTGTTACATAAAATAAAACAACTAAATCATAAGTATAATGTCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT------------------------------CAA-------GATCCA---------GAA-------TGCCACCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATATGTGTA------TGTCACACTTTCTTCCATTCACTCAGTACTGG
gi|32074 : AA-TGTATA-ATTAC-TGCAATAAAATCACTAAATCGTAAGTATAGAGCCCATGCAT-----------GCACG-TTTATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------AATTCA---------GAA-------TGCCAGTTGTGGTAAA-----TTGTCAGCCCTG--AATACAGATCCGTTAATAAGTGTATATTTTTGTCACACTTTATACCATTCACTCAGTACTGG
gi|32075 : CAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAGTTAACAATTCTGATCTGTTTTTATACGAAATCGCTATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32076 : aaataaaatactacattttacaaggaattatttaaacaATACAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAATTAACAATTCTGATCTGTTTTTATACGAAATCGCTATAGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32077 : aaataaaatactacattttacaaggaattatttaaT-----------GTACGATTGTTTTAT--TTTT---TAAATTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGTTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32078 : --ATC-T--GT----TT-TTTT-ATA--CGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACACCCCTTAATACATGTA------TGTCACACTTTCTACAGTTCATTCAGAACTAG
gi|32079 : tgtatgattgttttattttgtaaattaacaattatg--ATC-T--GT----TT-TTTT-ATA--CGAAA-TC---------GTT--------------A-------TGGCAGCTGTGGTAAA-----ATGACA----------------CCCCTTAATACGTGTA------TGTTACACTTTCTACAATTCATTCAGAACTAG
gi|32080 : tgtatgattgttttattttgtaaattaacaattctgG-TAAATTTACAATTCTGATT---TTTA--GTTGT--AT----CTGTTTT-TTAT-ACAAAATC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTTGCACTTTCTACCATTAATTCAGAACTGG
gi|32081 : tTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTAT-AAGAAATCA-----------CTA-------------------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTAATACGTGTA------TGTCACACTTTCTACCAGTCATTCAGAACTGG
gi|32082 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32083 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32084 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACATGTA------TGTCACACTTT----CATTCA
gi|32085 : ttgtAT--TCTAA-TT---TTTA--GTTGT--AT----CTGTTTTTATAT--GAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATATGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32086 : G-TT---TTAG--TTT-T--AT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------AGTCACACTTTCTACCATTCACTCAAAACTGG
gi|32087 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32088 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32089 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTC--AATACACATCCCTTAATACCTGTA------TGTCACACTTTCTACCATTCATTCAGAACTG
gi|32090 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32091 : A-------TGGTAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
Alignments
lowQualScore : 22222222222 111 11 1111 1 4444444444444444444444444444444444
lowQualScore : 3 4 2 1 77777777777 2 1 22 4 1 333 22 3333 7777 2 1 8 0 1 8888888888888888888888888888888888 333333 22 444444 1
lowQualScore : . . . . ........... . . .. . . ... .. .... .... . . . . . .................................. ...... .. ...... .
lowQualScore : 6 3 8 6 11111111111 7 0 88 7 9 888 00 8888 4444 8 7 7 2 7 8888888888888888888888888888888888 999999 00 111111 6
consensus : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
Reference ( family-664 ) : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32064 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TCATTTT-ACTT-CAAAAGTCAA-------GACCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32065 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATGCAT-----------GCATG-TTGATTTAT--TTTTA-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGATAAC-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCAATCAGTACTGG
gi|32066 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACCACTACATCGTAA------TGCCCATGAATAAATAATAAATGCACG-TTTATTTTT--TTTTT-TT---TTAA--TTT-C--AT----TTATTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTGTGGTAAATTGTCTTGTCAGCCCTG--AATACACATCGCTTAATACGCATA------TGTCACACTTTCTACC-TTCACTCAGTGCTGG
gi|32067 : TATAATAAA-TGCATATGTTAC---------------TAAATCGTAAGTATATTGCCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCCTA--AATACACATCCCTTAATACATG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32068 : TATAATAAA-TGCATTTGATACCGAAAATAAAACAACTAAATCGTAAGTATAATGC------AT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAC-------GATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAGCCGTA--GGTTCATATCCCTTAATACATGTA------TGTCATACTTTCTACCATTCACTCAGTACTGG
gi|32069 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTTAATCATAAGTATAATGCCCATGCAT-----------GCATG-TTCATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAGAGTCAA-------TATCCA---------GAA-------TGCCAGCTGTGGTAAA-----TTGACAG----------------CCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32070 : TATGATAAC-TGCATTTGTTATGTAAAATAAAACCACTAAATCGTAAGTTTAATGCCTATGCAT-----------GCACG-TTTATTTAT--TGTTG-TT---TTAA--ATT-C--AT----TTAGCTT-ACAT-CAAAATTCAA-------CATCCA---------GAA-------TGCTAGTTGTGGTAAA-----TTTACAGCCCTGAAAATACACATTCCTTAATATGCGTA------TGTCACACTTTCTACCATTCACTCATTACTGG
gi|32071 : TAAAATTAA-TGCATATGTTACATAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCATG-TTTATTTAT--TTGTG-TT---TTAA--ATT-T--AT----TTTTCAT-ACAT-CCAAAGTCAA-------TATCCA---------GAA-------AGCCAGCTGTGGTAAA-----ATGACTGCCCTG--ACTACACATCCCTTAATAGGTGTA------TGTCACACTTTCTACCATATACTCAGTACTGG
gi|32072 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACTGCTAAATCAAAAGTTTAATGCCCATAAATAAATAATAAATGCACA-TTTGTTTAT--TTCTG-TT---TTAA--ATT-C--AT----TTACTTT-ACAT-CAAAAGTCAA-------TATCCA---------GAA-------TGCTAGTTTTGGTAAA-----TTGTCAGCCCTG--AATACACATTCCTTAATATGCGTA------TGTCACATTTTCGACCATTCACTCAGTAATGG
gi|32073 : TAATAAAATGCATTTGTTACATAAAATAAAACAACTAAATCATAAGTATAATGTCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-TT---TTAA--ATT------------------------------CAA-------GATCCA---------GAA-------TGCCACCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATATGTGTA------TGTCACACTTTCTTCCATTCACTCAGTACTGG
gi|32074 : AA-TGTATA-ATTAC-TGCAATAAAATCACTAAATCGTAAGTATAGAGCCCATGCAT-----------GCACG-TTTATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTATTTT-ACAT-CAAAAGTCAA-------AATTCA---------GAA-------TGCCAGTTGTGGTAAA-----TTGTCAGCCCTG--AATACAGATCCGTTAATAAGTGTATATTTTTGTCACACTTTATACCATTCACTCAGTACTGG
gi|32075 : CAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAGTTAACAATTCTGATCTGTTTTTATACGAAATCGCTATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32076 : aaataaaatactacattttacaaggaattatttaaacaATACAT-----------GT-CT-TTAATTTTT--ATTAG-TT---TTAA--AAT-T--GTAGGATTGTTTT-ATTT-TGTAAATTAACAATTCTGATCTGTTTTTATACGAAATCGCTATAGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32077 : aaataaaatactacattttacaaggaattatttaaT-----------GTACGATTGTTTTAT--TTTT---TAAATTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGTTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32078 : --ATC-T--GT----TT-TTTT-ATA--CGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACACCCCTTAATACATGTA------TGTCACACTTTCTACAGTTCATTCAGAACTAG
gi|32079 : tgtatgattgttttattttgtaaattaacaattatg--ATC-T--GT----TT-TTTT-ATA--CGAAA-TC---------GTT--------------A-------TGGCAGCTGTGGTAAA-----ATGACA----------------CCCCTTAATACGTGTA------TGTTACACTTTCTACAATTCATTCAGAACTAG
gi|32080 : tgtatgattgttttattttgtaaattaacaattctgG-TAAATTTACAATTCTGATT---TTTA--GTTGT--AT----CTGTTTT-TTAT-ACAAAATC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTTGCACTTTCTACCATTAATTCAGAACTGG
gi|32081 : tTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTAT-AAGAAATCA-----------CTA-------------------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTAATACGTGTA------TGTCACACTTTCTACCAGTCATTCAGAACTGG
gi|32082 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32083 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32084 : ttgtTTTAT--TTT-G-TAAA-TTAACAATT-CTGAT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACATGTA------TGTCACACTTT----CATTCA
gi|32085 : ttgtAT--TCTAA-TT---TTTA--GTTGT--AT----CTGTTTTTATAT--GAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATATGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32086 : G-TT---TTAG--TTT-T--AT----CTGTTTT-TTATACGAAA-TC---------GCT--------------A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------AGTCACACTTTCTACCATTCACTCAAAACTGG
gi|32087 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32088 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32089 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTC--AATACACATCCCTTAATACCTGTA------TGTCACACTTTCTACCATTCATTCAGAACTG
gi|32090 : A-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32091 : A-------TGGTAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
blockSeqs : A G A T AAATAATAAAT A G AA T A AAA CA CTG AGGA A T A G AACAATTCTGATCTGTTTTTATACGAAATCGCTA TTGTCT AA TATTTT T
blockSeqs : . G C T AAATAATAAAT . T . T . AA CA CTG AGGA A . A G AACAATTCTGATCTGTTTTTATACGAAATCGCTA T . . T
blockSeqs : . C A A . . G . T . AA CA CTG . A . A G AAGATCCAGAA T . . T
blockSeqs : . G C A . . G . T . AA CA CTG . A . A G AATATCCAGAA T . . T
blockSeqs : . G C A . . C . T . AA CA CTG . A . A G AAGATCCAGAA T . . T
blockSeqs : . A C A . . T . T . . . GT . A . . T ACGATCCAGAA T . . T
blockSeqs : . G T A . . T . T . . . GT . T . . G AATATCCAGAA A . . T
blockSeqs : . A A A . . T . T . . . T . A . . G AACATCCAGAA T . . T
blockSeqs : . . C G . . G . T . . . C . A . . G AATATCCAGAA T . . T
blockSeqs : . . . . . . T . T . . . T . G . . G AATATCCAGAA T . . T
blockSeqs : . . A . A . . . T . G . . A AAGATCCAGAA A . . A
blockSeqs : . . A . A . . . T . G . . A AAAATTCAGAA A . . A
blockSeqs : . . G . T . . . C . G . . A GCTA A . . A
blockSeqs : . A . T . . . T . G . . . GCTA A . . A
blockSeqs : . A . . . C . G . . . GTTA A . . A
blockSeqs : . . . . . T . G . . . GCTA A . . A
blockSeqs : . . . . . T . G . . . ACTA A . . A
blockSeqs : . . . . . T . G . . . GCTA A . . A
blockSeqs : . . . . . T . G . . . GCTA A . . A
blockSeqs : . . . T . . . . . GCTA A . . A
blockSeqs : . T . . . . . GCTA A . . A
blockSeqs : . . . . . . . GCTA A . . A
blockSeqs : A . . A
blockSeqs : A . . A
blockSeqs : A . . A
blockSeqs : A . . A
blockSeqs : A . .
blockSeqCons : GNTATCCAGAA***********************
originalCons : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCAA-------GATCCA---------GAA-------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
finalCons : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-TT---TTAA--ATT-T--AT----TTGTTTT-ACAT-CGAAAGTCGNTATCCAGAA-----------------------TGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
Alignments
lowQualScore : 33333333333 111111 11 1111 1 3333333
lowQualScore : 3 4 2 1 11111111111 3 1 22 7 1 777777 66 8888 2 5 99 0 4 1 3333333 333333 22 444444 1
lowQualScore : . . . . ........... . . .. . . ...... .. .... . . .. . . . ....... ...... .. ...... .
lowQualScore : 6 3 8 6 77777777777 1 0 88 0 9 444444 77 4444 8 2 33 2 2 6 4444444 999999 00 111111 6
consensus : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-T--T---TTAA--ATT-C--ATCTGTTTT-ACAT-CGAAAGTCGCTATCCAGAATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
Reference ( family-664 ) : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCACG-TTNATTTAT--TTTTG-T--T---TTAA--ATT-T--ATTTGTTTT-ACAT-CGAAAGTCGNTATCCAGAATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32064 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-T--T---TTAA--ATT-T--ATTCATTTT-ACTT-CAAAAGTCAAGACCCAGAATGCCAGCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32065 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACAACTAAATCGTAAGTATATTGCCCATGCAT-----------GCATG-TTGATTTAT--TTTTA-T--T---TTAA--ATT-T--ATTTATTTT-ACAT-CAAAAGTCAAGATCCAGAATGCCAGCTGTGATAAC-----TTGACAGCCCTA--GATACACATCCCTTAATACGTG--------TGTCACACTTTCTACCATTCAATCAGTACTGG
gi|32066 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACCACTACATCGTAA------TGCCCATGAATAAATAATAAATGCACG-TTTATTTTT--TTTTT-T--T---TTAA--TTT-C--ATTTATTTT-ACAT-CAAAAGTCAATATCCAGAATGCTAGTTGTGGTAAATTGTCTTGTCAGCCCTG--AATACACATCGCTTAATACGCATA------TGTCACACTTTCTACC-TTCACTCAGTGCTGG
gi|32067 : TATAATAAA-TGCATATGTTAC---------------TAAATCGTAAGTATATTGCCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-T--T---TTAA--ATT-T--ATTTATTTT-ACAT-CAAAAGTCAAGATCCAGAATGCCAGCTGTGGTAAA-----TTGACAGCCCTA--AATACACATCCCTTAATACATG--------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32068 : TATAATAAA-TGCATTTGATACCGAAAATAAAACAACTAAATCGTAAGTATAATGC------AT-----------GCACG-TTGATTTAT--TTTTG-T--T---TTAA--ATT-T--ATTTATTTT-ACAT-CAAAAGTCACGATCCAGAATGCCAGCTGTGGTAAA-----TTGACAGCCGTA--GGTTCATATCCCTTAATACATGTA------TGTCATACTTTCTACCATTCACTCAGTACTGG
gi|32069 : TATAATAAA-TGCATTTGTTACGTAAAATAAAACCACTTAATCATAAGTATAATGCCCATGCAT-----------GCATG-TTCATTTAT--TTTTG-T--T---TTAA--ATT-T--ATTTATTTT-ACAT-CAAGAGTCAATATCCAGAATGCCAGCTGTGGTAAA-----TTGACAG----------------CCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCACTCAGTACTGG
gi|32070 : TATGATAAC-TGCATTTGTTATGTAAAATAAAACCACTAAATCGTAAGTTTAATGCCTATGCAT-----------GCACG-TTTATTTAT--TGTTG-T--T---TTAA--ATT-C--ATTTAGCTT-ACAT-CAAAATTCAACATCCAGAATGCTAGTTGTGGTAAA-----TTTACAGCCCTGAAAATACACATTCCTTAATATGCGTA------TGTCACACTTTCTACCATTCACTCATTACTGG
gi|32071 : TAAAATTAA-TGCATATGTTACATAAAATAAAACCACTAAATCGTAAGTATAATGCCCATGCAT-----------GCATG-TTTATTTAT--TTGTG-T--T---TTAA--ATT-T--ATTTTTCAT-ACAT-CCAAAGTCAATATCCAGAAAGCCAGCTGTGGTAAA-----ATGACTGCCCTG--ACTACACATCCCTTAATAGGTGTA------TGTCACACTTTCTACCATATACTCAGTACTGG
gi|32072 : TATAATAAC-TGCATTTGTTATGTAAAATAAAACTGCTAAATCAAAAGTTTAATGCCCATAAATAAATAATAAATGCACA-TTTGTTTAT--TTCTG-T--T---TTAA--ATT-C--ATTTACTTT-ACAT-CAAAAGTCAATATCCAGAATGCTAGTTTTGGTAAA-----TTGTCAGCCCTG--AATACACATTCCTTAATATGCGTA------TGTCACATTTTCGACCATTCACTCAGTAATGG
gi|32073 : TAATAAAATGCATTTGTTACATAAAATAAAACAACTAAATCATAAGTATAATGTCCATGCAT-----------GCACG-TTGATTTAT--TTTTG-T--T---TTAA--ATT-C--A------------------AG-----ATCCAGAATGCCACCTGTGGTAAA-----TTGACAGCCCTA--GATACACATCCCTTAATATGTGTA------TGTCACACTTTCTTCCATTCACTCAGTACTGG
gi|32074 : AA-TGTATA-ATTAC-TGCAATAAAATCACTAAATCGTAAGTATAGAGCCCATGCAT-----------GCACG-TTTATTTAT--TTTTG-T--T---TTAA--ATT-T--ATTTATTTT-ACAT-CAAAAGTCAAAATTCAGAATGCCAGTTGTGGTAAA-----TTGTCAGCCCTG--AATACAGATCCGTTAATAAGTGTATATTTTTGTCACACTTTATACCATTCACTCAGTACTGG
gi|32075 : TTTAT--TTT-G-TAAG---TTAACAATT-CTGATCTGTTTTTATA--CGAAA-TCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32076 : aaataaaatactacattttacaaggaattatttaaacacatgtctttaatttttattagttttaaaattgtaggattgtTTTAT--TTT-G-T--AAA-TTAACAATT-CTGATCTGTTTTTATA--CGAAA-TCGCTAT-------AGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32077 : aaataaaatactacattttacaaggaattatttaaatacatgtctttaatttttattagttttaaaattgtaggattgtT-----------GTACGATTGTTTTAT--TTTT-----TAAATTAACAATT-CTGATCTGTTTT-TTATACGAAA-TCGCTAT-------GGCAGCTGTGTTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32078 : --ATC-T--GTTT-TTTT-ATA--CGAAA-TCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACACCCCTTAATACATGTA------TGTCACACTTTCTACAGTTCATTCAGAACTAG
gi|32079 : tgtatgattgttttattttgtaaattaacaattatg--ATC-T--GTTT-TTTT-ATA--CGAAA-TCGTTAT-------GGCAGCTGTGGTAAA-----ATGACA----------------CCCCTTAATACGTGTA------TGTTACACTTTCTACAATTCATTCAGAACTAG
gi|32080 : tgtatgattgttttattttgtaaattaacaattctgG-TAAATTTACAATTCTGAT--T---TTTA--GTTGT--ATCTGTTTT-TTAT-ACAAAATCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTTGCACTTTCTACCATTAATTCAGAACTGG
gi|32081 : tTTTAT--TTT-G-T--AAA-TTAACAATT-CTGATCTGTTTT-TTAT-AAGAAATCACTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTAATACGTGTA------TGTCACACTTTCTACCAGTCATTCAGAACTGG
gi|32082 : ttgtTTTAT--TTT-G-T--AAA-TTAACAATT-CTGATCTGTTTT-TTATACGAAA-TCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32083 : ttgtTTTAT--TTT-G-T--AAA-TTAACAATT-CTGATCTGTTTT-TTATACGAAA-TCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32084 : ttgtTTTAT--TTT-G-T--AAA-TTAACAATT-CTGATCTGTTTT-TTATACGAAA-TCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACATGTA------TGTCACACTTT----CATTCA
gi|32085 : ttgtAT--TCTAA-T--T---TTTA--GTTGT--ATCTGTTTTTATAT--GAAA-TCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATATGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32086 : G-T--T---TTAG--TTT-T--ATCTGTTTT-TTATACGAAA-TCGCTAT-------GGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATACGTGTA------AGTCACACTTTCTACCATTCACTCAAAACTGG
gi|32087 : ATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAACTGG
gi|32088 : ATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTAATAAGTGTA------TGTCACACTTTCTACCATTCATTCAGAACTGG
gi|32089 : ATGGCAGCTGTGGTAAA-----ATGACAGCCCTC--AATACACATCCCTTAATACCTGTA------TGTCACACTTTCTACCATTCATTCAGAACTG
gi|32090 : ATGGCAGCTGTGGTAAA-----ATGACAGCCCTG--AATATACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG
gi|32091 : ATGGTAGCTGTGGTAAA-----ATGACAGCCCTG--AATACACATCCCTTTATACGTGTA------TGTCACACTTTCTACCATTCACTCAGAGCTGG