lowQualScore : 1111111111111111111111111111
lowQualScore : 111111 1111 111 111 1 111111111 33333333333333333333333333333 222222222 111 11 11111 1111 1 1 1 444 22222 1 1 4444444444444444444444444444
lowQualScore : 5 444444 5555 555 1 4 1 111 000 1 2 22 2 333 5 5 777777777 00000000000000000000000000000 666 555555555 0 7 7 444 0 6666666 00 00000 5 2 55 3 7777 2 99 2 7777 77 6 33 1 0 99 3 33 3 2 2 6 4 000 4 3 6 6 6 6 66666 3 5 3 3 0 2 2 7 0 2222222222222222222222222222 1 6 4 6
lowQualScore : . ...... .... ... . . . ... ... . . .. . ... . . ......... ............................. ... ......... . . . ... . ....... .. ..... . . .. . .... . .. . .... .. . .. . . .. . .. . . . . . ... . . . . . . ..... . . . . . . . . . ............................ . . . .
lowQualScore : 7 444444 7777 777 4 6 6 666 999 6 0 88 0 333 7 7 111111111 88888888888888888888888888888 444 444444444 8 0 0 222 5 8888888 00 66666 0 5 99 2 2222 5 11 5 8888 22 4 44 4 3 66 5 44 4 5 5 3 3 555 1 6 8 8 7 7 00000 8 7 3 3 5 5 7 5 5 3333333333333333333333333333 4 0 4 0
consensus : ATATTTATACATTTATTTTTCAAGGACCGGN-T-GTTTATATTCGTGTA--GCATAGCATTTCGCGCAG--TAAAATTATGCA-T--GA-CATCAT---A-G-GTTAC---------ATT-----------T---AAA-----------AATAGCGTCCAATCGTA---AATA----C---CCATGCCAGTGATCACGCGAGGTCA-T-GG-A-TTTTCCA-------GAAA--GATCTAGGTCAA----NT-CT-A--TTTTCCGAAAA--T-G-TACANCGGTCTA-TT----TTTATA-TTTTTGAAA--AATCATGCGTGCCGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTANCGTG-GCTTACCGTTATGGCTTCGGGCGG-T-A-G-AAGTTGGGGANGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACCCGTGACCGGANG--C-G--T--------TTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
Reference ( gi|143746 ) : ATATTTATACATTTATTTTTCAAGGACCAGT-T-GTTTATATTCACATG--GCATAGCAGTCCGTGCAA--TAATATTATGCA-T--GA-CACCAT---A-G-GTTAC---------ATT-----------T---GAA-----------AATAGCGTCCAATCGTA---AATA----C---CCATGCCAGTGATCACGCGAGGTCA-T-GG-A-TTTTCTA-------GAAA--GATCTAGGTCAA----CT-CT-A--TTTTCTGAAAA--G-G-TACATTGGTCTA-TT----TTTATA-TTTTTGATA--AATCATGCGTTCCGGCTGTTATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTTCGGTGCGCTAACGTG-GCTTACTGTTACGGCTTCGGGCGG-T-A-A-AAGTTGGGGACGGAGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGAGCCAATATGCGACAATACTGATTTGTTTTTACAGCTGACACCAATG------T--------T--------TTTTATACCATCAAGGGGGCAATAAAGCCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATTCCGTTCTAATTAATTTA
gi|143747 : ATATTTATACATTTATTTTTCAAGAACCGGT-T-GTTTATATTCGCGTG--GCATAGCAGTC--TGCAG--CAATATTATGCA-T--GA-CACTAT---A-G-GTTAC---------ATT-----------T---GAA-----------AATAGCGTCCAAACGTA---AATA----C---CCATGGCTGTGATCACGCGAGGTCA-T-GG-AATTTTCTA-------GAAA--GATCTAGGTCAA----TT-CT-A--TTTTCCGAAAA--T-G-TACACCGATCTA-TT----TTTATA-TTTTTGA-A--AATCATGCGTGCCGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTT----GCGATTACTTGGATACGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCATCGGGAGG-T-T-ATAAGTTTGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCTGGGG-TATATGGACTAATCAAATGCACG----------CGACAATACTGATTTGTTTTTACAGCTGACACC--TG------TGAACGGAAT--------TTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGCTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143748 : ATATTTATACATTTATTTTTCAAGAACCGGT-T-GTTTATATTCGCGTG--GCATAGCAGTATGTGCAG--CAATATTATGCA-T--GA-CATTAT---A-G-GTTAC---------ATT-----------T---GAA-----------AATAGCGTCCAAACGTA---AATA----C---CCATGCCTGTGATCACGCGAGGTCA-T-GGAA-TTTTCTA-------GAAA--GATCTAGGTCAA----TT-CT-A--TTTTCCGAAAA--T-G-TACACCGATCTA-TT----TTTATA-TTTTTGAAA--AATCATGCGTGCCGGTTGTGATAA--CTGGCACC-GTAATAAA--------------TAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTAATGCCTCGGGAGGTT-A-T-AAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAA-------------TTACAGCTGACACCTTTGACCGGAA--------T--------TGTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGTTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATATGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143750 : ATATTTATACATTTATTTTTCAAGAACCGGT-T-GTTTATATTCGCGTG--GCATAGCAGTCTGTGCAG--CAATATTATGCA-T--GA-CACTAT---A-G-GTTAC---------ATT-----------T---AAA-----------AATAGCGTCCAAACGTA---AATA----C---CCATGCCTGTGACCACGCGAGGTCA-T-GG-AATTTTCTA-------GAAA--GATCTAGGTCAA----TT-CT-A--TTTTCCGAAAA--T-G-TACACCGATCTA-TT----TTTATA-TTTTTGAAA--AATCATGCGTGCTGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCCTCGGGAGGTT-A-T-AAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATTTGCGACAATA
gi|143751 : ATATTTATACATTTATTTTTCAAGGACCTGT-T-GTTTATATTCACGTG--ACATAGCAGTCCATTCAG--TACTATTATGCA-T--GA-CACCAT---A-G-GTTAC---------ATT-----------T---GAA-----------AATAGCGTCCAATCGTA---AATA----C---CCATGCCAGTGATCACGCGAGGTCA-T-GGTA-TTTTCTA-------GAAA--GATCTAGGTCAA----CT-CT-A--TATTCCAAAAA--ATG-TACACCGATCTA-TT----TTTATA-TTTTCGAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACGCG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGAGCTAACGTG-GCTTACCGTTATGACTTCGGGCGG-T-A-ATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACCGTTCGGTAATTTACTAAAGCCGTGATATATATCCTGGGG
gi|143749 : ATATTTATACATTTATTTTTCAAGGACCGGT-T-ATTTATATTCGTGTT--GCATAGTAGTCCGCGCAG--TAATATTATGCA-T--TA-CACTAT---A-G-GCTAC---------ATT-----------T---GAA-----------AATAGCGTCCACTCGTA---AATA----C---CCATGCCAGTGATCACGGGAGATCA-T-GGAA-TTTTCCA-------GAAA--GATCTAGGTCAA----TT-AT-A--TTTTCAGGAAA--T-G-TACAGCGGTCTATTT----TTTATATTTTTTGAAA--AATCATGCGTGCCGTTAGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGACAGG
gi|143752 : ATATTT-CA-ATTTATTTTTCAAGAACAAAA-T-GTTTAAATTTGTGTA--GCATTGCATTTTGGACAG--TTAAATTGTGCA-T--GA-CATCAG---A-G-GTTAG---------AAT-----------T---CAA-----------TATAGCATCCAATCGTA---AATA---------------GGT--TCACACGAGGTCA-T-cggttagaagttggggacggggtgtcgtaatcatgtcagtttacagttcggcaatttaccaaagccgtgatatatgtcctgaggtatatggactaatcaaatgcacgcgccaatatgcgacaatactgatttgttttcacagctgacacctctgaccggaatttttataccatcaagttggcaataaaactatatggcgtcgcagatcagaatgatgtctgctggtcattataataaagtaattatttttttaattatttgttcgtttgtgaaagatcccgttctaattaattta
gi|143753 : TTTA---ATTTATTTTTCAGATATCATA-A-GTTTATATTCGTGTA--GTGCAACATTTCACAAAG--TAAATTTACGGA-A--GA-CATAAT---ATG-GTTACT--------ATTTAAAGTTTTTAT---AAA-----------AATAGCATCTATTTGCACCTAGTG--------TTATATCAGTGACCACGTGATGTCATT-GA-A-TTcaaattgttcaga
gi|143754 : TTATA----TATTTTTCAGAGATT-GT-AAGTTTATATTCGTGTA--GCGTAACATTTC------------ACTATGTA-T--GATTACTATATAA-A-GTT------------TTTA---------T---AAA-----------AATAGCGTCTATTTGTA---TATA----
gi|143755 : TATATATTTATTTTTCAAGGACC------GTGTA------------GCATTGCAGTCCGCGCAG--TAAAATTATGCA-T--GA-CACCAT---A-G-GTTAC---------ATT-----------T---AAA-----------TATAGCGTCCAATCATA---AAAA----C---CCATGCCATTGATCATGCGAGGTCA-T-GGAA-TTTTCCA-------GAAA--GATCTTGGTCAA----AT-CT-A--TTTTCTGAAAA--T-G-TACATCAGTCTG-TT----TTTATA-TTTTTGAAA--AATTATGCGTGCTGACTGTGATCA--ATGACATG-GTAATAAAT-CAATGTTTGTTTCGATTGCGATTACTGGGATCTGATCTT-----GTGTGCTGCCGTGTGCTTACCGTTATGGTTTCGGG-GA-T-ACG-AAGTTGGGGAGGGGGTGTC-CTAAATTA-TGTCACTTTATAGTTCGACAATTTACTAAAGCCGTGATATATGTCCT-GGGGTATAAGGAATAATGAAATGCACGTGCCAATATGCGACAATACTGATTTGTTTTCACAGTTGACACC--TG------TGACCTGAAT--------TTTTATACCACCAAGGAGGCA
gi|143756 : ATTTATTTTTCAATGAC-AGG-T-GTTAATATTTGTGTA--GCATTGCAGTTCGCGTAG--TAAAATTATGCA-T--GA-CACCAT---A-G-GTTAC---------ATT-----------T---AAA-----------AATAGCGTCCAATTGTA---AATA----C---TCATGCCAGCGATCACGCGAGGTCA-T-GG-AATTTTCCA-------GAAA--GAAATACGTCAA----CT-CTTA--TTTTCCGAAAA--T-G-TACATCGGCATA-TT----TTAATT-TTTTTTAAA--AATCATGCGTGCTGACTGTGATAA--TTGACATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGT-----ACACTAACATG-GCTTACCGTTATGGTTTTGGGCGG-T-A-AGAAGTTGGGGAGGAAGTGTC-GTGAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGTCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGGTTTGTTTTCACAGCTGACACCCGTGACCGGAA--------T--------TTTTATACC------------ATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAAAAAGGTCATTA-TTTTTTTAATTATCTG-TCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143757 : ATTTATTTTTCAAGGACCGGA-T-GTTTATATTTGTGTA--GCATTGCATTTCACACAG--TTAAATTATGCA-T--GA-CATCAG---A-G-GTTAG---------AAT-----------T---AAA-----------TATAGCGTCCAATCGTA---AATAGGGTC---ACAT--CAGTGATCACGCGAGGTCA-TCGA-A-TTGTCCA-------
gi|143760 : ATTTATTTTTCAAGAACCGGA-T-GTTTATATTCGTGTA--GCATTGCATTT--TGCAG--TTAAATTATGCA-C--GA-CATCAG---A-G-TTTAG---------AAT-----------T---TAA-----------TATAGCGTCGAATCGTA---AATAGG--G---TCATATCAGTGATCACGCGAGGTCT-TCGA-A-TTGTCCA-------GA
gi|143759 : ATTTATTTTTCAAGAACCTGA-T-CTTTATATTTGTGTA--GCATTGCATTTCGCACAG--TTAAATTATGCA-T--GA-CATCAG---A-G-GTTAG---------AAT-----------T---AAA-----------TATAGCGTCCAATCGTA---AATAGG--G---TCATATCAGTGACTAAACGAAGTCA-TCAA-A-TTGTCCA-------GA
gi|143761 : ATTTATTTTTCAGAGATC-GT-AAGTTTATATTCGTGTA--GCATAACATTTCACAAAG--TAAAGTTATGCA-A--GA-CATCAT---ATG-GTTACTATTTAAAGATT-----------TTATAAA-----------AATATCGTCTATTTGTATAAAGTG----T---C-ATATCAGTGACCATGCGAGGTCATT-GA-A-TT
gi|143758 : ATTTATTTTTCAGAGATT-GTAA-GTTTATATT---GTGAAGTGCAACATTTCACAAAG--TAA-ATT-TACA-TAAGA-CATAAT---ATG-GTTACT--------ATTTAAAGTTTTTAT---AAA-----------AATAGTGTCTATTTGTA---CATGGT--G---TCATATCAGTGACCATGCGATGTCATT-GA-A-TT
gi|143762 : TTTTTTTTTCAAGGACAGGA-T-GTTTATATTTGTGTA--GCATTGCATTTCACATAG--TAAAATTATGCA-T--GA-CATCAG---A-C-GTTAG---------AAT-----------T---AAA-----------TATAGCGTCCAATCGTA---AATA----GGG-TCATATCAGTGATCATGCGAGGTCA-TCGA-A-TTGTCCATGCTTGCGCGG--GA-CTAA--CAAAAATCT-CC-ACATTTTC--AATC--G-G-CATATT--TTGA-TT----TTT-----TTTTGAAA--AATCATGCATGCTGACTG--ATAA--TTGCCATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGT-----ACGCTACTTTG-GCTTATCGTTATGGTTTCGGGCGG-TTA-G-AAGTTGGGGAGGGGGTGTT-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCACAGCCATGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCACCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACCCGTGACCGGAA--------T--------TTGTATACCATCAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAATAAGGTAATTA-TTTTTTTAATTATCTGTTCGTTTGTGAAAGACCCTGTTCTAATTAATTTAgaccaga
gi|143763 : TTTGTTTTTCAAGGACCGGT-T-GTTTGTATTCATGTA--GCACTGCAGTCCGCGCAG--TAAAATAATACA-T--GA-TACCAT---A-G-
gi|143765 : -GTTTACATTTGTGTA--AAATAACATTTCCC-CAAG-TAAAATTACCCA-T--GA-CATCAT---A-GTGTTACT--------ATT-----------T---AAAGTTTTTATAAAAATAGCGTCCAATCGAA---CATA----CGGGTCAAGC--GTGATCAAGCAAGGTCA-T-
gi|143764 : ttcattttccgcgacaggaa-GTTTACATTTGTGTA--AAGTAACAATTCCC-CAAG-TAAAATTACCCA-T--GA-CATCAT---A-GTGTTACT--------ATT-----------T---AAAGTTTTTATAAAAATAGCGTCCAATCGAA---CATA----C-------G-----GGTCAAGCGAGGTCA-T-cgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaatctaaaaataaatcagggtcaaatacaattttctgaaaacagaagcagtctattttcgtgtttttggaaatgtgcatcccgcgtgacctttggcagaaaataaaactatgttt
gi|143766 : ttcattttccgcgacaggaa-GTTTACATTTGTGTA--AAATAGTATTTCCT-CAAAGTAAAATTAC-CAGT--TA-CATCAT---A-GTGTTACT--------ATT-----------T---AAAGTTTTTATAAAAGTAGTGTCCAATCGCA---CGTA----AGGGTCATGT--GTGATCAAGCGAGGTCA-T-cgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaatctaaaaataaatcggggtcaaatacaattttctgaaaacagaatcagtctattttcgtgtttttggaaatgtgcatcccgggtgacctttggcagaaaataaaactatgtt
gi|143767 : T---A-G-GTTAC---------ATT-----------T---AAA-----------AATAGTGTCCAATCGTA---AATA----C---CCATGCCAGCGATCACGCGAGGTCA-T-GG-AATTTTCCA-------GAAA--GAAATAGGTCAA----CT-CT-A--TTTTCCGAAAA--T-G-TACATTGGCATA-TT----TTGATT-TTTTTGAAA--AATCATGCGTGCTGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGT-----ACACTACCGTG-GCTTACCGTTATGGTTTCGGGCGG-TTA-G-AAGTTGGGGAGGGTGTGTC-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCAGGCGCCAATATGCAACAATACTGGTTTGTTTTCACAGCTGACACCCGTGACCGGAA--------T--------TTTTATACCATGAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGCCATTATAATAAGGTAATTcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggggtcaaatccaattttctgaaaacacaaagtagtctatttatgtttgtttttttttaaatgtgcatcctgtgtgacctttgacaggagtaataaaactatgttt
gi|143768 : ---------ATT-----------T-----A-----------AGCGGTGTCCAATCGTA---AAT-------------GCCAGTGATCACGTGAGGTTA-T-GGTA-TTTTCCA-------GAAA--GATCAAGGTCAA----CT-TT-A--TTTTCCAAAAA--T-A-AACAGCAGTTTA-TT----TTTAT---TTTTGAAA--AATCATGCGTGCTGATTGTGATGA--TTGACACG-TTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGT-----GCGCTACCCTG-GCATACCGTTTTAGCTTCGGCAGT-T-A-G-AAGTTGGGGAGGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGG-TATATG-ATTAATCAAATGCACGCGCCAATATGCGACAATACTGATTT-----CACAGCTGACACC--TG------TGACCAGAAT--------TTTCATACCATCAAGGGGGCAATAAAACCATATGGCGTTGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCCTTCTAATTAATTTA
gi|143769 : A---AATA----C---CCATGCCAGTGATCATGCGAGGTCA-T-GG-AATTTTCCA-------GAAA--GATATTGGTCAA----CT-TT-A--TTTTCCGAAAA--T-A-TACAGCGGTCTA-TT----TTTATA-TTTTTGAAA--AATCATGCATTCTGACTG--ATAA--TTGACATG-GTAATAAAT-CAAAGTTTGTTTTGATTGTGACTACTGGGATAGGATC--GT---GTGCGCTACTATG-ACTCACGTTTATGGCTTGGGGCAG-TTA-G-AAGTTGGGGATGGGGTGTC-GTAAATTA-TGTCCGTTTACAGTTCCGCAATTTAACAAAGCTGTGATATATGCCCTGCTG-TATATGGACTAATCAAATGCACACGCAAATATGCGACAATACTGATCTGTTTTCACAGCTGACACC--TG------T--------TACCAGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGAATGACGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCTATCTAATTAATTTA
gi|143770 : TACCAGTGATCAGGCGAGGTCA-T-GG-AATTTTCCA-------GAAA--GATCTAGGTCAA----AT-CG-T--TTTTCTGAAAA--T-G-TACAGCAGTCTA-TTC---TTTATA-TTTTT-ATATTAATCATGCGTGCTGATTGTGATCA--TTGACACG-GTAATAATT-CAATGTTTGTTTTGATTGCGATAATT----TCGGATCTTGT---GT------------GCTTACCGTTTTGACTTCGGG-GA-T-A-AGAAGTTGGGGAGAGGGTGTCTGTATTCCACTGTCA
gi|143771 : CAGTGATCACGCGAGGTCATT-GA-A-TTGTCCA-------GA
gi|143772 : TTGTA-------GAAAA-GATCAAGGTCAAA---TT-CC-A--TGTTCTAAAAA--T-GCTAAACTG-TATA-TT----TTTGTG-TTTTTGGT---AATTATGCATTCTAAATGTTAGAACTTTGGTAGA-GTAATATATGGAATGACTGTTT
gi|143765 : ggaattcctgaTCTA-------AAAATAAATCAGGGTCAA----ATACA-A--TTTTCTGAAAACAG-A-AGCA---GTCTA-TT----TTCGTG-TTTTTGG-A--AAT-GTGCATCCCG--CGTGACCT--TTGGCA-G-AAAATAAAA-CTATGTTT
gi|143764 : ttcattttccgcgacaggaagtttacatttgtgtaaaataacatttccccaagtaaaattacccatgacatcatagtgttactatttaaagtttttataaaaatagcgtccaatcgaacatacgggtcaagcgtgatcaagcaaggtcatcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaaTCTA-------AAAATAAATCGGGGTCAA----ATACA-A--TTTTCTGAAAA--C-A-GA-ATCAGTCTA-TT----TTCGTG-TTTTTGG-A--AAT-GTGCATCCCGG--GTGACCT--TTGGCA-G-AAAATAAAA-CTATGTT
gi|143766 : ttcattttccgcgacaggaagtttacatttgtgtaaagtaacaattccccaagtaaaattacccatgacatcatagtgttactatttaaagtttttataaaaatagcgtccaatcgaacatacgggtcaagcgaggtcatcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaaGGTCAA----AT-CC-AA-TTTTCTGAAAA--C-A-CAAAGTAGTCTA-TTTATGTTTGT--TTTTTTTTA--AAT-GTGCATCCTG--TGTGACCT--TTGACAGGAGTAATAAAA-CTATGTTT
gi|143749 : gtttacatttgtgtaaaatagtatttcctcaaagtaaaattaccagttacatcatagtgttactatttaaagtttttataaaagtagtgtccaatcgcacgtaagggtcatgtgtgatcaagcgaggtcatcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggCAGGCGG-TTA-G-AAGTTGGGGACGGGGTGTC-GTAA-TCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGAGG-TATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACCTCTG------ACCGGAA--T--------TTTTATACCATCAAGTTGGCAATAAAACTATATGGCGTCGCAGATCAGAATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATTTGTTCGTTTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143773 : atatttatacatttatttttcaaggaccggttatttatattcgtgttgcatagtagtccgcgcagtaatattatgcattacactataggctacatttgaaaatagcgtccactcgtaaatacccatgccagtgatcacgggagatcatggaattttccagaaagatctaggtcaattatattttcaggaaatgtacagcggtctattttttatattttttgaaaaatcatgcgtgccgttagtgataattgacacggtaataaatcaatgtttgttttgattgcgattactgggaTGTCCTGGGG-TATATGGATTAATCAAATGCACGCACCAATATGCAACAATACTGATTTGTTTTTACAGCTGACACC--TG------TGACCGGAAT--------TTTTATACCATCAAGGGGACAATAAAACTATATGGCGTCGCAGATCAGCATGATGTCTGCTTGTTATTATAATAAAGTAATTATTTTTTTTAATAACTTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143774 : GACAATACTGATTTGTTTTTACAGCTGACACCTGTGACGAGAT--------T--------TTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGGTCGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
Alignments
lowQualScore : 1 33333333333 111111111111 3333333333333333333 1 111111111111 111111111 22222 1 1 6666
lowQualScore : 4 4 3 0 2 1 4 22 1 1 333 5 5 0 77777777777 777777777777 333 666 0000000000000000000 1 1 1 1 6 8 7 4 666666666666 000000000 33 1 7 7777 2 1 2 2 1 1 2 7777 55 33 33 2 66 33 2 2 2 3 11111 3 3 5 6 8 777 1 3 3 1 0 4 8888 0 4
lowQualScore : . . . . . . . .. . . ... . . . ........... ............ ... ... ................... . . . . . . . . ............ ......... .. . . .... . . . . . . . .... .. .. .. . .. .. . . . . ..... . . . . . ... . . . . . . .... . .
lowQualScore : 1 0 7 9 5 3 9 66 9 9 222 5 5 9 00000000000 666666666666 000 111 9999999999999999999 7 7 7 7 7 3 3 5 000000000000 000000000 44 0 1 4444 4 0 4 4 8 8 4 4444 00 22 22 5 66 22 6 4 4 1 44444 3 3 4 2 5 555 0 1 1 5 8 8 2222 4 0
consensus : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GG-A-TTTTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGG-TTA-G-AAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACCTGTGACCGGAA---TTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
Reference ( family-661 ) : ATATTTATACATTTATTTTTCAAG-GACCGGNTGTTTATATTCGTGTAGCATAGCATTTCGCGCA--GTAAAATTATGCA-TGA-CATCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GG-A-TTTTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTANCGTG-GCTTACCGTTATGGCTTCGGGCGG-T-A-G-AAGTTGGGGANGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACCCGTGACCGGANGCGTTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143746 : ATATTTATACATTTATTTTTCAAG-GACCAGTTGTTTATATTCACATGGCATAGCAGTCCGTGCA--ATAATATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GG-A-TTTTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TTTTCTGAAAA-GG-TACATTGGTCTA-TT----TTTATA-TTTTT--GATA--AATCATGCGTTCCGGCTGTTATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTTCGGTGCGCTAACGTG-GCTTACTGTTACGGCTTCGGGCGG-T-A-A-AAGTTGGGGACGGAGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGAGCCAATATGCGACAATACTGATTTGTTTTTACAGCTGACACC--------AATGT-TTTTTATACCATCAAGGGGGCAATAAAGCCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATTCCGTTCTAATTAATTTA
gi|143747 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGC--A--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-GGC-TGT-G-ATCACGCGAGGTCA-T-GG-AATTTTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--A-TCATGCGTGCCGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTG----CGATTACTTGGATACGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCATCGGGAGG-TTA-T-AAGTTTGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCTGGGG-TATATGGACTAATCAAATGCACGCG----------ACAATACTGATTTGTTTTTACAGCTGACACCTGTGAACGGAA---TTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGCTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143748 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTATGTGCA--GCAATATTATGCA-TGA-CATTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-GCC-TGT-G-ATCACGCGAGGTCA-T-GGAA-TTTTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGTTGTGATAA--CTGGCACC-GTAATAAA--------------TAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTAATGCCTCGGGAGGTT-A-T-AAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAA-------------TTACAGCTGACACCTTTGACCGGAA---TTGTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGTTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATATGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143749 : ATATTTATACATTTATTTTTCAAG-GACCGGTTATTTATATTCGTGTTGCATAGTAGTCCGCGCA--GTAATATTATGCA-TTA-CACTAT---A-G-GCTAC-ATT-----------TGAA-----------AATAGCGTCCACTCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGGGAGATCA-T-GGAA-TTTTCCA------------GAA---------A--GATCTAGGTCAATT-AT----A-TTTTCAGGAAA-TG-TACAGCGGTCTATTT----TTTATATTTTTT--GAAA--AATCATGCGTGCCGTTAGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGACAGG
gi|143749 : CAGGCGG-TTA-G-AAGTTGGGGACGGGGTGTC-GTAA-TCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGAGG-TATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACCTCTGACCGGAA---TTTTTATACCATCAAGTTGGCAATAAAACTATATGGCGTCGCAGATCAGAATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATTTGTTCGTTTGTGAAAGATCCCGTTCTAATTAATTTAcggttagaagttggggacggggtgtcgtaatcatgtcagtttacagttcggcaatttaccaaagccgtgatatatgtcctgaggtatatggactaatcaaatgcacgcgccaatatgcgacaatactgatttgttttcacagctgacacctctgaccggaatttttataccatcaagttggcaataaaactatatggcgtcgcagatcagaatgatgtctgctggtcattataataaagtaattatttttttaattatttgttcgtttgtgaaagatcccgttctaattaattta
gi|143750 : atatttatacatttatttttcaaggaccggttatttatattcgtgttgcatagtagtccgcgcagtaatattatgcattacactataggctacatttgaaaatagcgtccactcgtaaatacccatgccagtgatcacgggagatcatggaattttccagaaagatctaggtcaattatattttcaggaaatgtacagcggtctattttttatattttttgaaaaatcatgcgtgccgttagtgataattgacacggtaataaatcaatgtttgttttgattgcgattactgggaATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGTGCA--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-GCC-TGT-G-ACCACGCGAGGTCA-T-GG-AATTTTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCTGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCCTCGGGAGGTT-A-T-AAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATTTGCGACAATA
gi|143751 : ATATTTATACATTTATTTTTCAAG-GACCTGTTGTTTATATTCACGTGACATAGCAGTCCATTCA--GTACTATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GGTA-TTTTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TATTCCAAAAAATG-TACACCGATCTA-TT----TTTATA-TTTTC--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACGCG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGAGCTAACGTG-GCTTACCGTTATGACTTCGGGCGG-T-A-ATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACCGTTCGGTAATTTACTAAAGCCGTGATATATATCCTGGGG
gi|143752 : ATATTT-CA-ATTTATTTTTCAAG-AACAAAATGTTTAAATTTGTGTAGCATTGCATTTTGGACA--GTTAAATTGTGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TCAA-----------TATAGCATCCAATCGT---A---AATA---------------------------GGT----TCACACGAGGTCA-TCAA-A-TTGTTCA------------GA
gi|143753 : TTTA---ATTTATTTTTCAGA-TATCATAAGTTTATATTCGTGTAGTGCAACATTTCACAAA--GTAAATTTACGGA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGCATCTATTTGC---ACCTAGTG------------------TTAT-ATC-AGT-G-ACCACGTGATGTCATT-GA-A-TT
gi|143754 : TTATA----TATTTTTCAGA-GATTGTAAGTTTATATTCGTGTAGCGTAACATTTCAC------------TATGTA-TGATTACTATATAA-A-GTT----TTTA---------TAAA-----------AATAGCGTCTATTTGT---A---TATA----
gi|143755 : TATATATTTATTTTTCAAG-GACCG--------------TGTAGCATTGCAGTCCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------TATAGCGTCCAATCAT---A---AAAA----C-------------CCAT-GCC-ATT-G-ATCATGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GATCTTGGTCAAAT-CT----A-TTTTCTGAAAA-TG-TACATCAGTCTG-TT----TTTATA-TTTTT--GAAA--AATTATGCGTGCTGACTGTGATCA--ATGACATG-GTAATAAAT-CAATGTTTGTTTCGATTGCGATTACTGGGATCTGATCTTGTGTGCTGC-----CGTGTGCTTACCGTTATGGTTTCGGG-GA-T-ACG-AAGTTGGGGAGGGGGTGTC-CTAAATTA-TGTCACTTTATAGTTCGACAATTTACTAAAGCCGTGATATATGTCCT-GGGGTATAAGGAATAATGAAATGCACGTGCCAATATGCGACAATACTGATTTGTTTTCACAGTTGACACCTGTGACCTGAA---TTTTTATACCACCAAGGAGGCA
gi|143756 : ATTTATTTTTCAAT-GACAGG-TGTTAATATTTGTGTAGCATTGCAGTTCGCGTA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATTGT---A---AATA----C-------------TCAT-GCC-AGC-G-ATCACGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GAAATACGTCAACT-CTT---A-TTTTCCGAAAA-TG-TACATCGGCATA-TT----TTAATT-TTTTT--TAAA--AATCATGCGTGCTGACTGTGATAA--TTGACATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTAACATG-GCTTACCGTTATGGTTTTGGGCGG-T-AAG-AAGTTGGGGAGGAAGTGTC-GTGAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGTCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGGTTTGTTTTCACAGCTGACACCCGTGACCGGAA---TTTTTATACC------------ATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAAAAAGGTCATTA-TTTTTTTAATTATCTG-TCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143757 : ATTTATTTTTCAAG-GACCGGATGTTTATATTTGTGTAGCATTGCATTTCACACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGGGTC-------------ACAT---C-AGT-G-ATCACGCGAGGTCA-TCGA-A-TTGTCCA------------
gi|143758 : ATTTATTTTTCAGA-GATTGTAAGTTTATATT-GTGAAGTGCAACATTTCACAAA--GTAAATTTACATA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGTGTCTATTTGT---A---CATGGT--G-------------TCAT-ATC-AGT-G-ACCATGCGATGTCATT-GA-A-TTGACCA------------GA
gi|143759 : ATTTATTTTTCAAG-AACCTGATCTTTATATTTGTGTAGCATTGCATTTCGCACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGG--G-------------TCAT-ATC-AGT-G-ACTAAACGAAGTCA-TCAA-A-TTGTCCA------------GA
gi|143760 : ATTTATTTTTCAAG-AACCGGATGTTTATATTCGTGTAGCATTGCATTT--TGCA--GTTAAATTATGCA-CGA-CATCAG---A-G-TTTAG-AAT-----------TTAA-----------TATAGCGTCGAATCGT---A---AATAGG--G-------------TCAT-ATC-AGT-G-ATCACGCGAGGTCT-TCGA-A-TTGTCCA------------GA
gi|143761 : ATTTATTTTTCAGA-GATCGTAAGTTTATATTCGTGTAGCATAACATTTCACAAA--GTAAAGTTATGCA-AGA-CATCAT---ATG-GTTACTATTTAAAGATTTTATAAA-----------AATATCGTCTATTTGTATAA---AGTG------------------TCAT-ATC-AGT-G-ACCATGCGAGGTCATT-GA-A-TT
gi|143762 : TTTTTTTTTCAAG-GACAGGATGTTTATATTTGTGTAGCATTGCATTTCACATA--GTAAAATTATGCA-TGA-CATCAG---A-C-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATA----GGG-----------TCAT-ATC-AGT-G-ATCATGCGAGGTCA-TCGA-A-TTGTCCATGCTTGC-----GCG---------G--GA-CTAACAAAAAT-CTCCACA-TTTTC----AA-T-------CGGCATA-TT----TTGATT-TTTTTTTGAAA--AATCATGCATGCTGACTG--ATAA--TTGCCATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACG-----CTACTTTG-GCTTATCGTTATGGTTTCGGGCGG-TTA-G-AAGTTGGGGAGGGGGTGTT-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCACAGCCATGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCACCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACCCGTGACCGGAA---TTTGTATACCATCAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAATAAGGTAATTA-TTTTTTTAATTATCTGTTCGTTTGTGAAAGACCCTGTTCTAATTAATTTA
gi|143763 : TTTGTTTTTCAAG-GACCGGTTGTTTGTATTCATGTAGCACTGCAGTCCGCGCA--GTAAAATAATACA-TGA-TACCAT---A-G-
gi|143764 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAGTAACAATTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATT-----------TAAAGTTTTTATAAAAATAGCGTCCAATCGA---A---CATA----CGGGTCAAGCGAGGTCATCGCCCAGTCGCATTATGTAAAGTGC-T-AG-AATTTTCCATGATTTGCGCGGGAATCTAAAAATA--AATCGGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-ATCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCGG--GTGACCT--TTGGCA-G-AAAATAAAA-CTATGTT
gi|143765 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAATAACATTTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGG----------TCAA-GC---GT-G-ATCAAGCAAGGTCA-T-
gi|143765 : TCTA------------AAA---------ATAAATCAGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-AGCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCG--CGTGACCT--TTGGCA-G-AAAATAAAA-CTATGTTTcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaatctaaaaataaatcagggtcaaatacaattttctgaaaacagaagcagtctattttcgtgtttttggaaatgtgcatcccgcgtgacctttggcagaaaataaaactatgttt
gi|143766 : ttcattttccgcgacaggaagtttacatttgtgtaaaataacatttccccaagtaaaattacccatgacatcatagtgttactatttaaagtttttataaaaatagcgtccaatcgaacatacgggtcaagcgtgatcaagcaaggtcatcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaaGTTTACATTTGTGTAAAATAGTATTTC-CTCAAAGTAAAATTAC-CAGTTA-CATCAT---A-GTGTTACTATT-----------TAAAGTTTTTATAAAAGTAGTGTCCAATCGC---ACGTAAGG----G-------------TCAT-GT---GT-G-ATCAAGCGAGGTCA-T-
gi|143766 : GGTCAAAT-CC----AATTTTCTGAAAA-CA-CAAAGTAGTCTA-TTTATGTTTGTT-TTTTT--TTAA--A--TGTGCATCCTG--TGTGACCT--TTGACAGGAGTAATAAAA-CTATGTTTcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggggtcaaatccaattttctgaaaacacaaagtagtctatttatgtttgtttttttttaaatgtgcatcctgtgtgacctttgacaggagtaataaaactatgttt
gi|143767 : gtttacatttgtgtaaaatagtatttcctcaaagtaaaattaccagttacatcatagtgttactatttaaagtttttataaaagtagtgtccaatcgcacgtaagggtcatgtgtgatcaagcgaggtcatcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggT---A-G-GTTAC-ATT-----------TAAA-----------AATAGTGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGC-G-ATCACGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GAAATAGGTCAACT-CT----A-TTTTCCGAAAA-TG-TACATTGGCATA-TT----TTGATT-TTTTT--GAAA--AATCATGCGTGCTGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTACCGTG-GCTTACCGTTATGGTTTCGGGCGG-TTA-G-AAGTTGGGGAGGGTGTGTC-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCAGGCGCCAATATGCAACAATACTGGTTTGTTTTCACAGCTGACACCCGTGACCGGAA---TTTTTATACCATGAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGCCATTATAATAAGGTAATT
gi|143768 : -ATT-----------TAAG-------------CGGTGTCCAATCGT---A---AAT------------------------GCC-AGT-G-ATCACGTGAGGTTA-T-GGTA-TTTTCCA------------GAA---------A--GATCAAGGTCAACT-TT----A-TTTTCCAAAAA-TA-AACAGCAGTTTA-TT----TTTAT---TTTT--GAAA--AATCATGCGTGCTGATTGTGATGA--TTGACACG-TTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCG-----CTACCCTG-GCATACCGTTTTAGCTTCGGCAGT-T-A-G-AAGTTGGGGAGGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGG-TATATG-ATTAATCAAATGCACGCGCCAATATGCGACAATACTGATTT-----CACAGCTGACACCTGTGACCAGAA---TTTTCATACCATCAAGGGGGCAATAAAACCATATGGCGTTGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCCTTCTAATTAATTTA
gi|143769 : ---A---AATA----C-------------CCAT-GCC-AGT-G-ATCATGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GATATTGGTCAACT-TT----A-TTTTCCGAAAA-TA-TACAGCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCATTCTGACTG--ATAA--TTGACATG-GTAATAAAT-CAAAGTTTGTTTTGATTGTGACTACTGGGATAGGATC--GTG---TGCGCTACTATG-ACTCACGTTTATGGCTTGGGGCAG-TTA-G-AAGTTGGGGATGGGGTGTC-GTAAATTA-TGTCCGTTTACAGTTCCGCAATTTAACAAAGCTGTGATATATGCCCTGCTG-TATATGGACTAATCAAATGCACACGCAAATATGCGACAATACTGATCTGTTTTCACAGCTGACACCTGTTACCAGAA---TTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGAATGACGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCTATCTAATTAATTTA
gi|143770 : T-ACC-AGT-G-ATCAGGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GATCTAGGTCAAAT-CG----T-TTTTCTGAAAA-TG-TACAGCAGTCTA-TTC---TTTATA-TTTTT---ATATTAATCATGCGTGCTGATTGTGATCA--TTGACACG-GTAATAATT-CAATGTTTGTTTTGATTGCGATAATT----TCGGATCTTGTGT---------------GCTTACCGTTTTGACTTCGGG-GA-TAA-G-AAGTTGGGGAGAGGGTGTCTGTATTCCACTGTCA
gi|143771 : C-AGT-G-ATCACGCGAGGTCATT-GA-A-TTGTCCA------------GA
gi|143772 : AA---------A--GATCAAGGTCAAATTCC----A-TGTTCTAAAAA-TGCTA-AACTGTATA-TT----TTTGTG-TTTTT--G-GT--AATTATGCATTCTAAATGTTAGAACTTTGGTAGA-GTAATATATGGAATGACTGTTT
gi|143773 : ggaattcctgattgtagaTGTCCTGGGG-TATATGGATTAATCAAATGCACGCACCAATATGCAACAATACTGATTTGTTTTTACAGCTGACACCTGTGACCGGAA---TTTTTATACCATCAAGGGGACAATAAAACTATATGGCGTCGCAGATCAGCATGATGTCTGCTTGTTATTATAATAAAGTAATTATTTTTTTTAATAACTTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143774 : GACAATACTGATTTGTTTTTACAGCTGACACCTGTGACGAGAT---TTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGGTCGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
Alignments
lowQualScore : 1 33333333333 111111111111 3333333333333333333 1 111111111111 111111111 22222 1
lowQualScore : 4 4 3 0 1 1 4 22 1 1 333 5 5 0 77777777777 777777777777 333 666 0000000000000000000 1 1 1 1 6 8 5 6 666666666666 000000000 33 1 7 7777 2 1 2 2 1 1 2 7777 55 33 33 2 77 33 2 2 2 3 11111 3 3 3 2 3 3 1 0 44 0 4
lowQualScore : . . . . . . . .. . . ... . . . ........... ............ ... ... ................... . . . . . . . . ............ ......... .. . . .... . . . . . . . .... .. .. .. . .. .. . . . . ..... . . . . . . . . .. . .
lowQualScore : 1 0 8 9 0 3 9 66 9 9 222 5 5 9 00000000000 666666666666 000 111 9999999999999999999 7 7 7 7 7 3 5 4 000000000000 000000000 44 0 1 4444 4 0 4 4 8 8 4 4444 00 22 22 5 99 22 6 4 4 1 44444 0 3 5 8 1 1 5 8 66 4 0
consensus : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
Reference ( family-661 ) : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GG-A-TTTTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143746 : ATATTTATACATTTATTTTTCAAG-GACCAGTTGTTTATATTCACATGGCATAGCAGTCCGTGCA--ATAATATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GG-A-TTTTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TTTTCTGAAAA-GG-TACATTGGTCTA-TT----TTTATA-TTTTT--GATA--AATCATGCGTTCCGGCTGTTATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTTCGGTGCGCTAACGTG-GCTTACTGTTACGGCTTCGGGCGG-TAAAAGTTGGGGACGGAGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGAGCCAATATGCGACAATACTGATTTGTTTTTACAGCTGACACCAATGT--------TTTTTATACCATCAAGGGGGCAATAAAGCCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATTCCGTTCTAATTAATTTA
gi|143747 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGC--A--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-GGC-TGT-G-ATCACGCGAGGTCA-T-GG-AATTTTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--A-TCATGCGTGCCGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTG----CGATTACTTGGATACGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCATCGGGAGGTTATAAGTTTGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCTGGGG-TATATGGACTAATCAAATGCACGCG----------ACAATACTGATTTGTTTTTACAGCTGACACC--TGTGAACGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGCTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143748 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTATGTGCA--GCAATATTATGCA-TGA-CATTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-GCC-TGT-G-ATCACGCGAGGTCA-T-GG-AATTTTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGTTGTGATAA--CTGGCACC-GTAATAAAT--------------AATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTAATGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAA-------------TTACAGCTGACACC--TTTGACCGGAATTGTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGTTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATATGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143749 : ATATTTATACATTTATTTTTCAAG-GACCGGTTATTTATATTCGTGTTGCATAGTAGTCCGCGCA--GTAATATTATGCA-TTA-CACTAT---A-G-GCTAC-ATT-----------TGAA-----------AATAGCGTCCACTCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGGGAGATCA-T-GGAA-TTTTCCA------------GAA---------A--GATCTAGGTCAATT-AT----A-TTTTCAGGAAA-TG-TACAGCGGTCTATTT----TTTATATTTTTT--GAAA--AATCATGCGTGCCGTTAGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGACAGG
gi|143749 : CAGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAA-TCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGAGG-TATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TCTGACCGGAATTTTTATACCATCAAGTTGGCAATAAAACTATATGGCGTCGCAGATCAGAATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATTTGTTCGTTTGTGAAAGATCCCGTTCTAATTAATTTAcggttagaagttggggacggggtgtcgtaatcatgtcagtttacagttcggcaatttaccaaagccgtgatatatgtcctgaggtatatggactaatcaaatgcacgcgccaatatgcgacaatactgatttgttttcacagctgacacctctgaccggaatttttataccatcaagttggcaataaaactatatggcgtcgcagatcagaatgatgtctgctggtcattataataaagtaattatttttttaattatttgttcgtttgtgaaagatcccgttctaattaattta
gi|143750 : atatttatacatttatttttcaaggaccggttatttatattcgtgttgcatagtagtccgcgcagtaatattatgcattacactataggctacatttgaaaatagcgtccactcgtaaatacccatgccagtgatcacgggagatcatggaattttccagaaagatctaggtcaattatattttcaggaaatgtacagcggtctattttttatattttttgaaaaatcatgcgtgccgttagtgataattgacacggtaataaatcaatgtttgttttgattgcgattactgggaATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGTGCA--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-GCC-TGT-G-ACCACGCGAGGTCA-T-GG-AATTTTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCTGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATTTGCGACAATA
gi|143751 : ATATTTATACATTTATTTTTCAAG-GACCTGTTGTTTATATTCACGTGACATAGCAGTCCATTCA--GTACTATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGT-G-ATCACGCGAGGTCA-T-GGTA-TTTTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TATTCCAAAAAATG-TACACCGATCTA-TT----TTTATA-TTTTC--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACGCG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGAGCTAACGTG-GCTTACCGTTATGACTTCGGGCGGTAATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACCGTTCGGTAATTTACTAAAGCCGTGATATATATCCTGGGG
gi|143752 : ATATTT-CA-ATTTATTTTTCAAG-AACAAAATGTTTAAATTTGTGTAGCATTGCATTTTGGACA--GTTAAATTGTGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TCAA-----------TATAGCATCCAATCGT---A---AATA---------------------------GGT----TCACACGAGGTCA-TCAA-A-TTGTTCA------------GA
gi|143753 : TTTA---ATTTATTTTTCAGA-TATCATAAGTTTATATTCGTGTAGTGCAACATTTCACAAA--GTAAATTTACGGA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGCATCTATTTGC---ACCTAGTG------------------TTAT-ATC-AGT-G-ACCACGTGATGTCATT-GA-A-TT
gi|143754 : TTATA----TATTTTTCAGA-GATTGTAAGTTTATATTCGTGTAGCGTAACATTTCAC------------TATGTA-TGATTACTATATAA-A-GTT----TTTA---------TAAA-----------AATAGCGTCTATTTGT---A---TATA----
gi|143755 : TATATATTTATTTTTCAAG-GACCG--------------TGTAGCATTGCAGTCCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------TATAGCGTCCAATCAT---A---AAAA----C-------------CCAT-GCC-ATT-G-ATCATGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GATCTTGGTCAAAT-CT----A-TTTTCTGAAAA-TG-TACATCAGTCTG-TT----TTTATA-TTTTT--GAAA--AATTATGCGTGCTGACTGTGATCA--ATGACATG-GTAATAAAT-CAATGTTTGTTTCGATTGCGATTACTGGGATCTGATCTTGTGTGCTGC-----CGTGTGCTTACCGTTATGGTTTCGGG-GATACGAAGTTGGGGAGGGGGTGTC-CTAAATTA-TGTCACTTTATAGTTCGACAATTTACTAAAGCCGTGATATATGTCCT-GGGGTATAAGGAATAATGAAATGCACGTGCCAATATGCGACAATACTGATTTGTTTTCACAGTTGACACC--TGTGACCTGAATTTTTATACCACCAAGGAGGCA
gi|143756 : ATTTATTTTTCAAT-GACAGG-TGTTAATATTTGTGTAGCATTGCAGTTCGCGTA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATTGT---A---AATA----C-------------TCAT-GCC-AGC-G-ATCACGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GAAATACGTCAACT-CTT---A-TTTTCCGAAAA-TG-TACATCGGCATA-TT----TTAATT-TTTTT--TAAA--AATCATGCGTGCTGACTGTGATAA--TTGACATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTAACATG-GCTTACCGTTATGGTTTTGGGCGGTAAGAAGTTGGGGAGGAAGTGTC-GTGAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGTCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACC------------ATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAAAAAGGTCATTA-TTTTTTTAATTATCTG-TCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143757 : ATTTATTTTTCAAG-GACCGGATGTTTATATTTGTGTAGCATTGCATTTCACACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGGGTC-------------ACAT---C-AGT-G-ATCACGCGAGGTCA-TCGA-A-TTGTCCA------------
gi|143758 : ATTTATTTTTCAGA-GATTGTAAGTTTATATT-GTGAAGTGCAACATTTCACAAA--GTAAATTTACATA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGTGTCTATTTGT---A---CATGGT--G-------------TCAT-ATC-AGT-G-ACCATGCGATGTCATT-GA-A-TTGACCA------------GA
gi|143759 : ATTTATTTTTCAAG-AACCTGATCTTTATATTTGTGTAGCATTGCATTTCGCACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGG--G-------------TCAT-ATC-AGT-G-ACTAAACGAAGTCA-TCAA-A-TTGTCCA------------GA
gi|143760 : ATTTATTTTTCAAG-AACCGGATGTTTATATTCGTGTAGCATTGCATTT--TGCA--GTTAAATTATGCA-CGA-CATCAG---A-G-TTTAG-AAT-----------TTAA-----------TATAGCGTCGAATCGT---A---AATAGG--G-------------TCAT-ATC-AGT-G-ATCACGCGAGGTCT-TCGA-A-TTGTCCA------------GA
gi|143761 : ATTTATTTTTCAGA-GATCGTAAGTTTATATTCGTGTAGCATAACATTTCACAAA--GTAAAGTTATGCA-AGA-CATCAT---ATG-GTTACTATTTAAAGATTTTATAAA-----------AATATCGTCTATTTGTATAA---AGTG------------------TCAT-ATC-AGT-G-ACCATGCGAGGTCATT-GA-A-TT
gi|143762 : TTTTTTTTTCAAG-GACAGGATGTTTATATTTGTGTAGCATTGCATTTCACATA--GTAAAATTATGCA-TGA-CATCAG---A-C-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATA----GGG-----------TCAT-ATC-AGT-G-ATCATGCGAGGTCA-TCGA-A-TTGTCCATGCTTGC-----GCG---------G--GA-CTAACAAAAAT-CTCCACA-TTTTC----AA-T-------CGGCATA-TT----TTGATT-TTTTTTTGAAA--AATCATGCATGCTGACTG--ATAA--TTGCCATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACG-----CTACTTTG-GCTTATCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGGGTGTT-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCACAGCCATGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCACCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTGTATACCATCAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAATAAGGTAATTA-TTTTTTTAATTATCTGTTCGTTTGTGAAAGACCCTGTTCTAATTAATTTA
gi|143763 : TTTGTTTTTCAAG-GACCGGTTGTTTGTATTCATGTAGCACTGCAGTCCGCGCA--GTAAAATAATACA-TGA-TACCAT---A-G-
gi|143764 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAGTAACAATTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATT-----------TAAAGTTTTTATAAAAATAGCGTCCAATCGA---A---CATA----CGGGTCAAGCGAGGTCATCGCCCAGTCGCATTATGTAAAGTGC-T-AG-AATTTTCCATGATTTGCGCGGGAATCTAAAAATA--AATCGGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-ATCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCGG--GTGACCT--TTGGCA-G-AAAATAAAA-CTATGTT
gi|143765 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAATAACATTTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGG----------TCAA-GC---GT-G-ATCAAGCAAGGTCA-T-
gi|143765 : TCTA------------AAA---------ATAAATCAGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-AGCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCG--CGTGACCT--TTGGCA-G-AAAATAAAA-CTATGTTTcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaatctaaaaataaatcagggtcaaatacaattttctgaaaacagaagcagtctattttcgtgtttttggaaatgtgcatcccgcgtgacctttggcagaaaataaaactatgttt
gi|143766 : ttcattttccgcgacaggaagtttacatttgtgtaaaataacatttccccaagtaaaattacccatgacatcatagtgttactatttaaagtttttataaaaatagcgtccaatcgaacatacgggtcaagcgtgatcaagcaaggtcatcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaaGTTTACATTTGTGTAAAATAGTATTTC-CTCAAAGTAAAATTAC-CAGTTA-CATCAT---A-GTGTTACTATT-----------TAAAGTTTTTATAAAAGTAGTGTCCAATCGC---ACGTAAGG----G-------------TCAT-GT---GT-G-ATCAAGCGAGGTCA-T-
gi|143766 : GGTCAAAT-CC----AATTTTCTGAAAA-CA-CAAAGTAGTCTA-TTTATGTTTGTT-TTTTT--TTAA--A--TGTGCATCCTG--TGTGACCT--TTGACAGGAGTAATAAAA-CTATGTTTcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggggtcaaatccaattttctgaaaacacaaagtagtctatttatgtttgtttttttttaaatgtgcatcctgtgtgacctttgacaggagtaataaaactatgttt
gi|143767 : gtttacatttgtgtaaaatagtatttcctcaaagtaaaattaccagttacatcatagtgttactatttaaagtttttataaaagtagtgtccaatcgcacgtaagggtcatgtgtgatcaagcgaggtcatcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggT---A-G-GTTAC-ATT-----------TAAA-----------AATAGTGTCCAATCGT---A---AATA----C-------------CCAT-GCC-AGC-G-ATCACGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GAAATAGGTCAACT-CT----A-TTTTCCGAAAA-TG-TACATTGGCATA-TT----TTGATT-TTTTT--GAAA--AATCATGCGTGCTGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTACCGTG-GCTTACCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGTGTGTC-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCAGGCGCCAATATGCAACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACCATGAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGCCATTATAATAAGGTAATT
gi|143768 : -ATT-----------TAAG-------------CGGTGTCCAATCGT---A---AAT------------------------GCC-AGT-G-ATCACGTGAGGTTA-T-GGTA-TTTTCCA------------GAA---------A--GATCAAGGTCAACT-TT----A-TTTTCCAAAAA-TA-AACAGCAGTTTA-TT----TTTAT---TTTT--GAAA--AATCATGCGTGCTGATTGTGATGA--TTGACACG-TTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCG-----CTACCCTG-GCATACCGTTTTAGCTTCGG-CAGTTAGAAGTTGGGGAGGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGG-TATATG-ATTAATCAAATGCACGCGCCAATATGCGACAATACTGATTT-----CACAGCTGACACC--TGTGACCAGAATTTTCATACCATCAAGGGGGCAATAAAACCATATGGCGTTGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCCTTCTAATTAATTTA
gi|143769 : ---A---AATA----C-------------CCAT-GCC-AGT-G-ATCATGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GATATTGGTCAACT-TT----A-TTTTCCGAAAA-TA-TACAGCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCATTCTGACTG--ATAA--TTGACATG-GTAATAAAT-CAAAGTTTGTTTTGATTGTGACTACTGGGATAGGATC--GTG---TGCGCTACTATG-ACTCACGTTTATGGCTTGGGGCAGTTAGAAGTTGGGGATGGGGTGTC-GTAAATTA-TGTCCGTTTACAGTTCCGCAATTTAACAAAGCTGTGATATATGCCCTGCTG-TATATGGACTAATCAAATGCACACGCAAATATGCGACAATACTGATCTGTTTTCACAGCTGACACC--TGTTACCAGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGAATGACGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCTATCTAATTAATTTA
gi|143770 : T-ACC-AGT-G-ATCAGGCGAGGTCA-T-GG-AATTTTCCA------------GAA---------A--GATCTAGGTCAAAT-CG----T-TTTTCTGAAAA-TG-TACAGCAGTCTA-TTC---TTTATA-TTTTT---ATATTAATCATGCGTGCTGATTGTGATCA--TTGACACG-GTAATAATT-CAATGTTTGTTTTGATTGCGATAATT----TCGGATCTTGTGT---------------GCTTACCGTTTTGACTTCGGG-GATAAGAAGTTGGGGAGAGGGTGTCTGTATTCCACTGTCA
gi|143771 : C-AGT-G-ATCACGCGAGGTCATT-GA-A-TTGTCCA------------GA
gi|143772 : AA---------A--GATCAAGGTCAAATTCC----A-TGTTCTAAAAA-TGCTA-AACTGTATA-TT----TTTGTG-TTTTT--G-GT--AATTATGCATTCTAAATGTTAGAACTTTGGTAGA-GTAATATATGGAATGACTGTTT
gi|143773 : ggaattcctgattgtagaTGTCCTGGGG-TATATGGATTAATCAAATGCACGCACCAATATGCAACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGACAATAAAACTATATGGCGTCGCAGATCAGCATGATGTCTGCTTGTTATTATAATAAAGTAATTATTTTTTTTAATAACTTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143774 : GACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACGAGATTTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGGTCGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
Alignments
lowQualScore : 1 44444444444 3333333333333333333 111111111111 111111111 22222 1
lowQualScore : 4 4 3 0 1 1 4 22 1 1 333 5 5 0 55555555555 999999999999 333 666 0000000000000000000 1 1 1 1 44444 555555555555 000000000 55 1 7 7777 2 1 2 2 1 1 2 7777 55 33 33 2 77 33 2 2 2 3 11111 3 3 3 2 3 3 1 0 44 0 4
lowQualScore : . . . . . . . .. . . ... . . . ........... ............ ... ... ................... . . . . ..... ............ ......... .. . . .... . . . . . . . .... .. .. .. . .. .. . . . . ..... . . . . . . . . .. . .
lowQualScore : 1 0 8 9 0 3 9 66 9 9 222 5 5 9 77777777777 000000000000 000 111 9999999999999999999 7 7 7 7 22222 222222222222 000000000 99 0 1 4444 4 0 4 4 8 8 4 4444 00 22 22 5 99 22 6 4 4 1 44444 0 3 5 8 1 1 5 8 66 4 0
consensus : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
Reference ( family-661 ) : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143746 : ATATTTATACATTTATTTTTCAAG-GACCAGTTGTTTATATTCACATGGCATAGCAGTCCGTGCA--ATAATATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGA-TT-----TTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TTTTCTGAAAA-GG-TACATTGGTCTA-TT----TTTATA-TTTTT--GATA--AATCATGCGTTCCGGCTGTTATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTTCGGTGCGCTAACGTG-GCTTACTGTTACGGCTTCGGGCGG-TAAAAGTTGGGGACGGAGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGAGCCAATATGCGACAATACTGATTTGTTTTTACAGCTGACACCAATGT--------TTTTTATACCATCAAGGGGGCAATAAAGCCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATTCCGTTCTAATTAATTTA
gi|143747 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGC--A--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-GCTGT-G-ATCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--A-TCATGCGTGCCGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTG----CGATTACTTGGATACGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCATCGGGAGGTTATAAGTTTGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCTGGGG-TATATGGACTAATCAAATGCACGCG----------ACAATACTGATTTGTTTTTACAGCTGACACC--TGTGAACGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGCTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143748 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTATGTGCA--GCAATATTATGCA-TGA-CATTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-CCTGT-G-ATCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGTTGTGATAA--CTGGCACC-GTAATAAA--------------TAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTAATGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAA-------------TTACAGCTGACACC--TTTGACCGGAATTGTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGTTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATATGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143749 : ATATTTATACATTTATTTTTCAAG-GACCGGTTATTTATATTCGTGTTGCATAGTAGTCCGCGCA--GTAATATTATGCA-TTA-CACTAT---A-G-GCTAC-ATT-----------TGAA-----------AATAGCGTCCACTCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGGGAGATCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAATT-AT----A-TTTTCAGGAAA-TG-TACAGCGGTCTATTT----TTTATATTTTTT--GAAA--AATCATGCGTGCCGTTAGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGACAGG
gi|143749 : CAGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAA-TCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGAGG-TATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TCTGACCGGAATTTTTATACCATCAAGTTGGCAATAAAACTATATGGCGTCGCAGATCAGAATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATTTGTTCGTTTGTGAAAGATCCCGTTCTAATTAATTTAcggttagaagttggggacggggtgtcgtaatcatgtcagtttacagttcggcaatttaccaaagccgtgatatatgtcctgaggtatatggactaatcaaatgcacgcgccaatatgcgacaatactgatttgttttcacagctgacacctctgaccggaatttttataccatcaagttggcaataaaactatatggcgtcgcagatcagaatgatgtctgctggtcattataataaagtaattatttttttaattatttgttcgtttgtgaaagatcccgttctaattaattta
gi|143750 : atatttatacatttatttttcaaggaccggttatttatattcgtgttgcatagtagtccgcgcagtaatattatgcattacactataggctacatttgaaaatagcgtccactcgtaaatacccatgccagtgatcacgggagatcatggaattttccagaaagatctaggtcaattatattttcaggaaatgtacagcggtctattttttatattttttgaaaaatcatgcgtgccgttagtgataattgacacggtaataaatcaatgtttgttttgattgcgattactgggaATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGTGCA--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-CCTGT-G-ACCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCTGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATTTGCGACAATA
gi|143751 : ATATTTATACATTTATTTTTCAAG-GACCTGTTGTTTATATTCACGTGACATAGCAGTCCATTCA--GTACTATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGTATT-----TTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TATTCCAAAAAATG-TACACCGATCTA-TT----TTTATA-TTTTC--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACGCG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGAGCTAACGTG-GCTTACCGTTATGACTTCGGGCGGTAATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACCGTTCGGTAATTTACTAAAGCCGTGATATATATCCTGGGG
gi|143752 : ATATTT-CA-ATTTATTTTTCAAG-AACAAAATGTTTAAATTTGTGTAGCATTGCATTTTGGACA--GTTAAATTGTGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TCAA-----------TATAGCATCCAATCGT---A---AATA---------------------------GGT----TCACACGAGGTCATCAAATT-----GTTCA------------GA
gi|143753 : TTTA---ATTTATTTTTCAGA-TATCATAAGTTTATATTCGTGTAGTGCAACATTTCACAAA--GTAAATTTACGGA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGCATCTATTTGC---ACCTAGTG------------------TTAT-A-TCAGT-G-ACCACGTGATGTCATTGAATT-----
gi|143754 : TTATA----TATTTTTCAGA-GATTGTAAGTTTATATTCGTGTAGCGTAACATTTCAC------------TATGTA-TGATTACTATATAA-A-GTT----TTTA---------TAAA-----------AATAGCGTCTATTTGT---A---TATA----
gi|143755 : TATATATTTATTTTTCAAG-GACCG--------------TGTAGCATTGCAGTCCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------TATAGCGTCCAATCAT---A---AAAA----C-------------CCAT-G-CCATT-G-ATCATGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTTGGTCAAAT-CT----A-TTTTCTGAAAA-TG-TACATCAGTCTG-TT----TTTATA-TTTTT--GAAA--AATTATGCGTGCTGACTGTGATCA--ATGACATG-GTAATAAAT-CAATGTTTGTTTCGATTGCGATTACTGGGATCTGATCTTGTGTGCTGC-----CGTGTGCTTACCGTTATGGTTTCGGG-GATACGAAGTTGGGGAGGGGGTGTC-CTAAATTA-TGTCACTTTATAGTTCGACAATTTACTAAAGCCGTGATATATGTCCT-GGGGTATAAGGAATAATGAAATGCACGTGCCAATATGCGACAATACTGATTTGTTTTCACAGTTGACACC--TGTGACCTGAATTTTTATACCACCAAGGAGGCA
gi|143756 : ATTTATTTTTCAAT-GACAGG-TGTTAATATTTGTGTAGCATTGCAGTTCGCGTA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATTGT---A---AATA----C-------------TCAT-G-CCAGC-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GAAATACGTCAACT-CTT---A-TTTTCCGAAAA-TG-TACATCGGCATA-TT----TTAATT-TTTTT--TAAA--AATCATGCGTGCTGACTGTGATAA--TTGACATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTAACATG-GCTTACCGTTATGGTTTTGGGCGGTAAGAAGTTGGGGAGGAAGTGTC-GTGAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGTCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACC------------ATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAAAAAGGTCATTA-TTTTTTTAATTATCTG-TCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143757 : ATTTATTTTTCAAG-GACCGGATGTTTATATTTGTGTAGCATTGCATTTCACACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGGGTC-------------ACAT----CAGT-G-ATCACGCGAGGTCATCGAATT-----GTCCA------------
gi|143758 : ATTTATTTTTCAGA-GATTGTAAGTTTATATT-GTGAAGTGCAACATTTCACAAA--GTAAATTTACATA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGTGTCTATTTGT---A---CATGGT--G-------------TCAT-A-TCAGT-G-ACCATGCGATGTCATTGAATT-----GACCA------------GA
gi|143759 : ATTTATTTTTCAAG-AACCTGATCTTTATATTTGTGTAGCATTGCATTTCGCACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGG--G-------------TCAT-A-TCAGT-G-ACTAAACGAAGTCATCAAATT-----GTCCA------------GA
gi|143760 : ATTTATTTTTCAAG-AACCGGATGTTTATATTCGTGTAGCATTGCATTT--TGCA--GTTAAATTATGCA-CGA-CATCAG---A-G-TTTAG-AAT-----------TTAA-----------TATAGCGTCGAATCGT---A---AATAGG--G-------------TCAT-A-TCAGT-G-ATCACGCGAGGTCTTCGAATT-----GTCCA------------GA
gi|143761 : ATTTATTTTTCAGA-GATCGTAAGTTTATATTCGTGTAGCATAACATTTCACAAA--GTAAAGTTATGCA-AGA-CATCAT---ATG-GTTACTATTTAAAGATTTTATAAA-----------AATATCGTCTATTTGTATAA---AGTG------------------TCAT-A-TCAGT-G-ACCATGCGAGGTCATTGAATT-----
gi|143762 : TTTTTTTTTCAAG-GACAGGATGTTTATATTTGTGTAGCATTGCATTTCACATA--GTAAAATTATGCA-TGA-CATCAG---A-C-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATA----GGG-----------TCAT-A-TCAGT-G-ATCATGCGAGGTCATCGAATT-----GTCCATGCTTGC-----GCG---------G--GA-CTAACAAAAAT-CTCCACA-TTTTC----AA-T-------CGGCATA-TT----TTGATT-TTTTTTTGAAA--AATCATGCATGCTGACTG--ATAA--TTGCCATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACG-----CTACTTTG-GCTTATCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGGGTGTT-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCACAGCCATGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCACCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTGTATACCATCAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAATAAGGTAATTA-TTTTTTTAATTATCTGTTCGTTTGTGAAAGACCCTGTTCTAATTAATTTA
gi|143763 : TTTGTTTTTCAAG-GACCGGTTGTTTGTATTCATGTAGCACTGCAGTCCGCGCA--GTAAAATAATACA-TGA-TACCAT---A-G-
gi|143764 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAGTAACAATTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGGTCAAGCGAGGTCATCGCCCAGTCGCATTATGTAAAGTGCTAGAATT-----TTCCATGATTTGCGCGGGAATCTAAAAATA--AATCGGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-ATCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCGG--GTGACCT--TTGGCA-G-AAAATAAAA-CTATGTT
gi|143765 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAATAACATTTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGG----------TCAA-G-C--GT-G-ATCAAGCAAGGTCAT
gi|143765 : GGAAT--------CTA------------AAA---------ATAAATCAGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-AGCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCG--CGTGACCT--TTGGCA-G-AAAATAAAA-CTATGTTTcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaatctaaaaataaatcagggtcaaatacaattttctgaaaacagaagcagtctattttcgtgtttttggaaatgtgcatcccgcgtgacctttggcagaaaataaaactatgttt
gi|143766 : ttcattttccgcgacaggaagtttacatttgtgtaaaataacatttccccaagtaaaattacccatgacatcatagtgttactatttaaagtttttataaaaatagcgtccaatcgaacatacgggtcaagcgtgatcaagcaaggtcatcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgGTTTACATTTGTGTAAAATAGTATTTC-CTCAAAGTAAAATTAC-CAGTTA-CATCAT---A-GTGTTACTATT-----------TAAAGTTTTTATAAAAGTAGTGTCCAATCGC---ACGTAAGG----G-------------TCAT-G-T--GT-G-ATCAAGCGAGGTCAT
gi|143766 : GGTCAAAT-CC----AATTTTCTGAAAA-CA-CAAAGTAGTCTA-TTTATGTTTGTT-TTTTT--TTAA--A--TGTGCATCCTG--TGTGACCT--TTGACAGGAGTAATAAAA-CTATGTTTcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggggtcaaatccaattttctgaaaacacaaagtagtctatttatgtttgtttttttttaaatgtgcatcctgtgtgacctttgacaggagtaataaaactatgttt
gi|143767 : gtttacatttgtgtaaaatagtatttcctcaaagtaaaattaccagttacatcatagtgttactatttaaagtttttataaaagtagtgtccaatcgcacgtaagggtcatgtgtgatcaagcgaggtcatcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggT---A-G-GTTAC-ATT-----------TAAA-----------AATAGTGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGC-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GAAATAGGTCAACT-CT----A-TTTTCCGAAAA-TG-TACATTGGCATA-TT----TTGATT-TTTTT--GAAA--AATCATGCGTGCTGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTACCGTG-GCTTACCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGTGTGTC-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCAGGCGCCAATATGCAACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACCATGAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGCCATTATAATAAGGTAATT
gi|143768 : -ATT-----------TAAG-------------CGGTGTCCAATCGT---A---AAT------------------------G-CCAGT-G-ATCACGTGAGGTTATGGTATT-----TTCCA------------GAA---------A--GATCAAGGTCAACT-TT----A-TTTTCCAAAAA-TA-AACAGCAGTTTA-TT----TTTAT---TTTT--GAAA--AATCATGCGTGCTGATTGTGATGA--TTGACACG-TTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCG-----CTACCCTG-GCATACCGTTTTAGCTTCGG-CAGTTAGAAGTTGGGGAGGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGG-TATATG-ATTAATCAAATGCACGCGCCAATATGCGACAATACTGATTT-----CACAGCTGACACC--TGTGACCAGAATTTTCATACCATCAAGGGGGCAATAAAACCATATGGCGTTGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCCTTCTAATTAATTTA
gi|143769 : ---A---AATA----C-------------CCAT-G-CCAGT-G-ATCATGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATATTGGTCAACT-TT----A-TTTTCCGAAAA-TA-TACAGCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCATTCTGACTG--ATAA--TTGACATG-GTAATAAAT-CAAAGTTTGTTTTGATTGTGACTACTGGGATAGGATC--GTG---TGCGCTACTATG-ACTCACGTTTATGGCTTGGGGCAGTTAGAAGTTGGGGATGGGGTGTC-GTAAATTA-TGTCCGTTTACAGTTCCGCAATTTAACAAAGCTGTGATATATGCCCTGCTG-TATATGGACTAATCAAATGCACACGCAAATATGCGACAATACTGATCTGTTTTCACAGCTGACACC--TGTTACCAGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGAATGACGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCTATCTAATTAATTTA
gi|143770 : T-A-CCAGT-G-ATCAGGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAAAT-CG----T-TTTTCTGAAAA-TG-TACAGCAGTCTA-TTC---TTTATA-TTTTT---ATATTAATCATGCGTGCTGATTGTGATCA--TTGACACG-GTAATAATT-CAATGTTTGTTTTGATTGCGATAATT----TCGGATCTTGTGT---------------GCTTACCGTTTTGACTTCGGG-GATAAGAAGTTGGGGAGAGGGTGTCTGTATTCCACTGTCA
gi|143771 : CAGT-G-ATCACGCGAGGTCATTGAATT-----GTCCA------------GA
gi|143772 : GGAATTCCTGATTGTA------------GAA---------AA-GATCAAGGTCAAATTCC----A-TGTTCTAAAAA-TGCTA-AACTGTATA-TT----TTTGTG-TTTTT--G-GT--AATTATGCATTCTAAATGTTAGAACTTTGGTAGA-GTAATATATGGAATGACTGTTT
gi|143773 : TGTCCTGGGG-TATATGGATTAATCAAATGCACGCACCAATATGCAACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGACAATAAAACTATATGGCGTCGCAGATCAGCATGATGTCTGCTTGTTATTATAATAAAGTAATTATTTTTTTTAATAACTTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143774 : GACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACGAGATTTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGGTCGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
Alignments
lowQualScore : 1 44444444444 3333333333333333333 111111111111 111111111 22222 1
lowQualScore : 4 4 3 0 1 1 4 22 1 1 333 5 5 0 55555555555 999999999999 333 666 0000000000000000000 1 1 1 1 44444 555555555555 000000000 55 1 7 7777 2 1 2 2 1 1 2 7777 55 33 33 2 77 33 2 2 2 3 11111 3 3 3 2 3 3 1 0 44 0 4
lowQualScore : . . . . . . . .. . . ... . . . ........... ............ ... ... ................... . . . . ..... ............ ......... .. . . .... . . . . . . . .... .. .. .. . .. .. . . . . ..... . . . . . . . . .. . .
lowQualScore : 1 0 8 9 0 3 9 66 9 9 222 5 5 9 77777777777 000000000000 000 111 9999999999999999999 7 7 7 7 22222 222222222222 000000000 99 0 1 4444 4 0 4 4 8 8 4 4444 00 22 22 5 99 22 6 4 4 1 44444 0 3 5 8 1 1 5 8 66 4 0
consensus : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
Reference ( family-661 ) : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143746 : ATATTTATACATTTATTTTTCAAG-GACCAGTTGTTTATATTCACATGGCATAGCAGTCCGTGCA--ATAATATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGA-TT-----TTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TTTTCTGAAAA-GG-TACATTGGTCTA-TT----TTTATA-TTTTT--GATA--AATCATGCGTTCCGGCTGTTATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTTCGGTGCGCTAACGTG-GCTTACTGTTACGGCTTCGGGCGG-TAAAAGTTGGGGACGGAGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGAGCCAATATGCGACAATACTGATTTGTTTTTACAGCTGACACCAATGT--------TTTTTATACCATCAAGGGGGCAATAAAGCCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATTCCGTTCTAATTAATTTA
gi|143747 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGC--A--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-GCTGT-G-ATCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--A-TCATGCGTGCCGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTG----CGATTACTTGGATACGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCATCGGGAGGTTATAAGTTTGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCTGGGG-TATATGGACTAATCAAATGCACGCG----------ACAATACTGATTTGTTTTTACAGCTGACACC--TGTGAACGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGCTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143748 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTATGTGCA--GCAATATTATGCA-TGA-CATTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-CCTGT-G-ATCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGTTGTGATAA--CTGGCACC-GTAATAAA--------------TAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTAATGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAA-------------TTACAGCTGACACC--TTTGACCGGAATTGTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGTTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATATGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143749 : ATATTTATACATTTATTTTTCAAG-GACCGGTTATTTATATTCGTGTTGCATAGTAGTCCGCGCA--GTAATATTATGCA-TTA-CACTAT---A-G-GCTAC-ATT-----------TGAA-----------AATAGCGTCCACTCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGGGAGATCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAATT-AT----A-TTTTCAGGAAA-TG-TACAGCGGTCTATTT----TTTATATTTTTT--GAAA--AATCATGCGTGCCGTTAGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGACAGG
gi|143749 : CAGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAA-TCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGAGG-TATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TCTGACCGGAATTTTTATACCATCAAGTTGGCAATAAAACTATATGGCGTCGCAGATCAGAATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATTTGTTCGTTTGTGAAAGATCCCGTTCTAATTAATTTAcggttagaagttggggacggggtgtcgtaatcatgtcagtttacagttcggcaatttaccaaagccgtgatatatgtcctgaggtatatggactaatcaaatgcacgcgccaatatgcgacaatactgatttgttttcacagctgacacctctgaccggaatttttataccatcaagttggcaataaaactatatggcgtcgcagatcagaatgatgtctgctggtcattataataaagtaattatttttttaattatttgttcgtttgtgaaagatcccgttctaattaattta
gi|143750 : atatttatacatttatttttcaaggaccggttatttatattcgtgttgcatagtagtccgcgcagtaatattatgcattacactataggctacatttgaaaatagcgtccactcgtaaatacccatgccagtgatcacgggagatcatggaattttccagaaagatctaggtcaattatattttcaggaaatgtacagcggtctattttttatattttttgaaaaatcatgcgtgccgttagtgataattgacacggtaataaatcaatgtttgttttgattgcgattactgggaATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGTGCA--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-CCTGT-G-ACCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCCGAAAA-TG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCTGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAATGTG-GCTTACCGTTATTGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATTTGCGACAATA
gi|143751 : ATATTTATACATTTATTTTTCAAG-GACCTGTTGTTTATATTCACGTGACATAGCAGTCCATTCA--GTACTATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGTATT-----TTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TATTCCAAAAAATG-TACACCGATCTA-TT----TTTATA-TTTTC--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACGCG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGAGCTAACGTG-GCTTACCGTTATGACTTCGGGCGGTAATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACCGTTCGGTAATTTACTAAAGCCGTGATATATATCCTGGGG
gi|143752 : ATATTT-CA-ATTTATTTTTCAAG-AACAAAATGTTTAAATTTGTGTAGCATTGCATTTTGGACA--GTTAAATTGTGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TCAA-----------TATAGCATCCAATCGT---A---AATA---------------------------GGT----TCACACGAGGTCATCAAATT-----GTTCA------------GA
gi|143753 : TTTA---ATTTATTTTTCAGA-TATCATAAGTTTATATTCGTGTAGTGCAACATTTCACAAA--GTAAATTTACGGA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGCATCTATTTGC---ACCTAGTG------------------TTAT-A-TCAGT-G-ACCACGTGATGTCATTGAATT-----
gi|143754 : TTATA----TATTTTTCAGA-GATTGTAAGTTTATATTCGTGTAGCGTAACATTTCAC------------TATGTA-TGATTACTATATAA-A-GTT----TTTA---------TAAA-----------AATAGCGTCTATTTGT---A---TATA----
gi|143755 : TATATATTTATTTTTCAAG-GACCG--------------TGTAGCATTGCAGTCCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------TATAGCGTCCAATCAT---A---AAAA----C-------------CCAT-G-CCATT-G-ATCATGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTTGGTCAAAT-CT----A-TTTTCTGAAAA-TG-TACATCAGTCTG-TT----TTTATA-TTTTT--GAAA--AATTATGCGTGCTGACTGTGATCA--ATGACATG-GTAATAAAT-CAATGTTTGTTTCGATTGCGATTACTGGGATCTGATCTTGTGTGCTGC-----CGTGTGCTTACCGTTATGGTTTCGGG-GATACGAAGTTGGGGAGGGGGTGTC-CTAAATTA-TGTCACTTTATAGTTCGACAATTTACTAAAGCCGTGATATATGTCCT-GGGGTATAAGGAATAATGAAATGCACGTGCCAATATGCGACAATACTGATTTGTTTTCACAGTTGACACC--TGTGACCTGAATTTTTATACCACCAAGGAGGCA
gi|143756 : ATTTATTTTTCAAT-GACAGG-TGTTAATATTTGTGTAGCATTGCAGTTCGCGTA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATTGT---A---AATA----C-------------TCAT-G-CCAGC-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GAAATACGTCAACT-CTT---A-TTTTCCGAAAA-TG-TACATCGGCATA-TT----TTAATT-TTTTT--TAAA--AATCATGCGTGCTGACTGTGATAA--TTGACATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTAACATG-GCTTACCGTTATGGTTTTGGGCGGTAAGAAGTTGGGGAGGAAGTGTC-GTGAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGTCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACC------------ATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAAAAAGGTCATTA-TTTTTTTAATTATCTG-TCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143757 : ATTTATTTTTCAAG-GACCGGATGTTTATATTTGTGTAGCATTGCATTTCACACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGGGTC-------------ACAT----CAGT-G-ATCACGCGAGGTCATCGAATT-----GTCCA------------
gi|143758 : ATTTATTTTTCAGA-GATTGTAAGTTTATATT-GTGAAGTGCAACATTTCACAAA--GTAAATTTACATA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGTGTCTATTTGT---A---CATGGT--G-------------TCAT-A-TCAGT-G-ACCATGCGATGTCATTGAATT-----GACCA------------GA
gi|143759 : ATTTATTTTTCAAG-AACCTGATCTTTATATTTGTGTAGCATTGCATTTCGCACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGG--G-------------TCAT-A-TCAGT-G-ACTAAACGAAGTCATCAAATT-----GTCCA------------GA
gi|143760 : ATTTATTTTTCAAG-AACCGGATGTTTATATTCGTGTAGCATTGCATTT--TGCA--GTTAAATTATGCA-CGA-CATCAG---A-G-TTTAG-AAT-----------TTAA-----------TATAGCGTCGAATCGT---A---AATAGG--G-------------TCAT-A-TCAGT-G-ATCACGCGAGGTCTTCGAATT-----GTCCA------------GA
gi|143761 : ATTTATTTTTCAGA-GATCGTAAGTTTATATTCGTGTAGCATAACATTTCACAAA--GTAAAGTTATGCA-AGA-CATCAT---ATG-GTTACTATTTAAAGATTTTATAAA-----------AATATCGTCTATTTGTATAA---AGTG------------------TCAT-A-TCAGT-G-ACCATGCGAGGTCATTGAATT-----
gi|143762 : TTTTTTTTTCAAG-GACAGGATGTTTATATTTGTGTAGCATTGCATTTCACATA--GTAAAATTATGCA-TGA-CATCAG---A-C-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATA----GGG-----------TCAT-A-TCAGT-G-ATCATGCGAGGTCATCGAATT-----GTCCATGCTTGC-----GCG---------G--GA-CTAACAAAAAT-CTCCACA-TTTTC----AA-T-------CGGCATA-TT----TTGATT-TTTTTTTGAAA--AATCATGCATGCTGACTG--ATAA--TTGCCATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACG-----CTACTTTG-GCTTATCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGGGTGTT-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCACAGCCATGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCACCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTGTATACCATCAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAATAAGGTAATTA-TTTTTTTAATTATCTGTTCGTTTGTGAAAGACCCTGTTCTAATTAATTTA
gi|143763 : TTTGTTTTTCAAG-GACCGGTTGTTTGTATTCATGTAGCACTGCAGTCCGCGCA--GTAAAATAATACA-TGA-TACCAT---A-G-
gi|143764 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAGTAACAATTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGGTCAAGCGAGGTCATCGCCCAGTCGCATTATGTAAAGTGCTAGAATT-----TTCCATGATTTGCGCGGGAATCTAAAAATA--AATCGGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-ATCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCGG--GTGACCT--TTGGCA-G-AAAATAAAA-CTATGTT
gi|143765 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAATAACATTTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGG----------TCAA-G-C--GT-G-ATCAAGCAAGGTCAT
gi|143765 : GGAAT--------CTA------------AAA---------ATAAATCAGGGTCAAATACA----A-TTTTCTGAAAA-CA-GA-AGCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCG--CGTGACCT--TTGGCA-G-AAAATAAAA-CTATGTTTcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaatctaaaaataaatcagggtcaaatacaattttctgaaaacagaagcagtctattttcgtgtttttggaaatgtgcatcccgcgtgacctttggcagaaaataaaactatgttt
gi|143766 : ttcattttccgcgacaggaagtttacatttgtgtaaaataacatttccccaagtaaaattacccatgacatcatagtgttactatttaaagtttttataaaaatagcgtccaatcgaacatacgggtcaagcgtgatcaagcaaggtcatcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgGTTTACATTTGTGTAAAATAGTATTTC-CTCAAAGTAAAATTAC-CAGTTA-CATCAT---A-GTGTTACTATT-----------TAAAGTTTTTATAAAAGTAGTGTCCAATCGC---ACGTAAGG----G-------------TCAT-G-T--GT-G-ATCAAGCGAGGTCAT
gi|143766 : GGTCAAAT-CC----AATTTTCTGAAAA-CA-CAAAGTAGTCTA-TTTATGTTTGTT-TTTTT--TTAA--A--TGTGCATCCTG--TGTGACCT--TTGACAGGAGTAATAAAA-CTATGTTTcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggggtcaaatccaattttctgaaaacacaaagtagtctatttatgtttgtttttttttaaatgtgcatcctgtgtgacctttgacaggagtaataaaactatgttt
gi|143767 : gtttacatttgtgtaaaatagtatttcctcaaagtaaaattaccagttacatcatagtgttactatttaaagtttttataaaagtagtgtccaatcgcacgtaagggtcatgtgtgatcaagcgaggtcatcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggT---A-G-GTTAC-ATT-----------TAAA-----------AATAGTGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGC-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GAAATAGGTCAACT-CT----A-TTTTCCGAAAA-TG-TACATTGGCATA-TT----TTGATT-TTTTT--GAAA--AATCATGCGTGCTGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTACA-----CTACCGTG-GCTTACCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGTGTGTC-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCAGGCGCCAATATGCAACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACCATGAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGCCATTATAATAAGGTAATT
gi|143768 : -ATT-----------TAAG-------------CGGTGTCCAATCGT---A---AAT------------------------G-CCAGT-G-ATCACGTGAGGTTATGGTATT-----TTCCA------------GAA---------A--GATCAAGGTCAACT-TT----A-TTTTCCAAAAA-TA-AACAGCAGTTTA-TT----TTTAT---TTTT--GAAA--AATCATGCGTGCTGATTGTGATGA--TTGACACG-TTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCG-----CTACCCTG-GCATACCGTTTTAGCTTCGG-CAGTTAGAAGTTGGGGAGGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGG-TATATG-ATTAATCAAATGCACGCGCCAATATGCGACAATACTGATTT-----CACAGCTGACACC--TGTGACCAGAATTTTCATACCATCAAGGGGGCAATAAAACCATATGGCGTTGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCCTTCTAATTAATTTA
gi|143769 : ---A---AATA----C-------------CCAT-G-CCAGT-G-ATCATGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATATTGGTCAACT-TT----A-TTTTCCGAAAA-TA-TACAGCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCATTCTGACTG--ATAA--TTGACATG-GTAATAAAT-CAAAGTTTGTTTTGATTGTGACTACTGGGATAGGATC--GTG---TGCGCTACTATG-ACTCACGTTTATGGCTTGGGGCAGTTAGAAGTTGGGGATGGGGTGTC-GTAAATTA-TGTCCGTTTACAGTTCCGCAATTTAACAAAGCTGTGATATATGCCCTGCTG-TATATGGACTAATCAAATGCACACGCAAATATGCGACAATACTGATCTGTTTTCACAGCTGACACC--TGTTACCAGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGAATGACGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCTATCTAATTAATTTA
gi|143770 : T-A-CCAGT-G-ATCAGGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAAAT-CG----T-TTTTCTGAAAA-TG-TACAGCAGTCTA-TTC---TTTATA-TTTTT---ATATTAATCATGCGTGCTGATTGTGATCA--TTGACACG-GTAATAATT-CAATGTTTGTTTTGATTGCGATAATT----TCGGATCTTGTGT---------------GCTTACCGTTTTGACTTCGGG-GATAAGAAGTTGGGGAGAGGGTGTCTGTATTCCACTGTCA
gi|143771 : CAGT-G-ATCACGCGAGGTCATTGAATT-----GTCCA------------GA
gi|143772 : GGAATTCCTGATTGTA------------GAA---------AA-GATCAAGGTCAAATTCC----A-TGTTCTAAAAA-TGCTA-AACTGTATA-TT----TTTGTG-TTTTT--G-GT--AATTATGCATTCTAAATGTTAGAACTTTGGTAGA-GTAATATATGGAATGACTGTTT
gi|143773 : TGTCCTGGGG-TATATGGATTAATCAAATGCACGCACCAATATGCAACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGACAATAAAACTATATGGCGTCGCAGATCAGCATGATGTCTGCTTGTTATTATAATAAAGTAATTATTTTTTTTAATAACTTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143774 : GACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACGAGATTTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGGTCGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
blockSeqs : C C T G G G AA G T ATA T T T TAAAGTTTTTA GTTTTTATAAAA ATA CCT CGGGTCAAGCGAGGT C C C C CCTGA TGATTTGCGCGG TCTAAAAAT TA T A CCAC A C A C C C T TATG AT TT TT A GT CT C A G C GTGCG A T A C T C G G . T
blockSeqs : C C T G G G . . . . T T T TAAAGTTTTTA A . CGT GGGTCA . . . . . TGCTTGC . A T A T . C . . C C . C A . . A GT . C . . C GTGCG A . A C . . G G . .
blockSeqs : C . T G G G . . . . T T T TAAAGATTTTA A . . CGGGT . . . . . . . . T T . . A . . C G . . A . . A TT . C . . C GTGCG A . C C . . G G . .
blockSeqs : C . T G G T . . . . . . T TAAAGTTTTTA A . . GTGT . . . . . . . . T . . . C . . C C . . A . . A GT . C . . C GTGAG A . A C . . G G . .
blockSeqs : C . T G A A . . . . . . T TAAAGTTTTTA A . . GGGT . . . . . . . . C . . . C . . C C . . A . . A GC . C . . T CTGC A . C C . . G G . .
blockSeqs : T . A T G A . . . . . . T TA A . . GGGT . . . . . . . . A . . . T . . C T . . A . . A AC . T . . A TGCG C . C G . . G G . .
blockSeqs : . . A T A G . . . . . . . . T . . GGGT . . . . . . . . C . . . C . . C T . . T . . A AC . T . . A . C . C G . . G . . .
blockSeqs : . . A T A G . . . . . . . . A . . CC . . . . . . . . A . . . T . . A T . . T . . A AC . T . . A . C . C G . . G . . .
blockSeqs : . . A G G A . . . . . . . . A . . CC . . . . . . . . A . . . T . . C G . . G . . A AC . G . . C . C . C G . . G . . .
blockSeqs : . A G G A . . . . . . . . T . . CC . . . . . . . . A . . . T . . C G . . G . . A AT . C . . T . . . C G . . . . .
blockSeqs : . A T A A . . . . . . . . A . . CC . . . . . . . . A . . . C . . C T . . T . . A AC . C . . . . . . . T . . . . .
blockSeqs : . A T A G . . . . . . . . T . . CC . . . . . . . . C . . . C . . C G . . T . . A AT . T . . . G . . .
blockSeqs : . A T G A . . . . . . . . A . . CC . . . . . . . . C . . . C . . . G . . A . . . AA . C . .
blockSeqs : . A T A A . . . . . . . . T . . CT . . . . . . . . C . . . T . . . G . . A . . . G . G . .
blockSeqs : . T T A G . . . . . . . . T . . GT . . . . . . . . A . . . T . . . A . . G . . . . . . . .
blockSeqs : . A T G C . . . . . . . . A . . CC . . . . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . A G C C . . . . . . . . T . . CC . . . . . .
blockSeqs : . . A C T . . . . . . . . A . . T . . . . . .
blockSeqs : . . T . . . . . . . . . . A . . T . . . . . .
blockSeqs : T . . . . . . . . . . A . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . .
blockSeqs : . . . . . . .
blockSeqs : . . .
blockSeqCons : TGCG* **
originalCons : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGGTGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
finalCons : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCCGAAAA-TG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGTGCG-CTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
Alignments
lowQualScore : 1 44444444444 3333333333333333333 111111111111 111111111 3333333 1
lowQualScore : 4 4 3 0 1 1 4 22 1 1 333 5 5 0 55555555555 999999999999 333 666 0000000000000000000 1 1 1 1 44444 555555555555 000000000 55 1 7 7777 2 33 2 1 1 2 7777 55 33 33 2 77 33 2 2 2 3 3333333 3 3 3 2 3 3 1 0 44 0 4
lowQualScore : . . . . . . . .. . . ... . . . ........... ............ ... ... ................... . . . . ..... ............ ......... .. . . .... . .. . . . . .... .. .. .. . .. .. . . . . ....... . . . . . . . . .. . .
lowQualScore : 1 0 8 9 0 3 9 66 9 9 222 5 5 9 77777777777 000000000000 000 111 9999999999999999999 7 7 7 7 22222 222222222222 000000000 99 0 1 4444 4 44 4 8 8 4 4444 00 22 22 5 99 22 6 4 4 1 7777777 0 3 5 8 1 1 5 8 66 4 0
consensus : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCC-GAAAATG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGC-G-TGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
Reference ( family-661 ) : ATATTTATACATTTATTTTTCAAG-GACCGGATGTTTATATTCGTGTAGCATAGCANTTCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAANT-CT----A-TTTTCC-GAAAATG-TACANCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGC-G-TGCGCTAACGTG-GCTTACCGTTATGGCTTCGGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143746 : ATATTTATACATTTATTTTTCAAG-GACCAGTTGTTTATATTCACATGGCATAGCAGTCCGTGCA--ATAATATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGA-TT-----TTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TTTTCT-GAAAAGG-TACATTGGTCTA-TT----TTTATA-TTTTT--GATA--AATCATGCGTTCCGGCTGTTATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTTCGG-TGCGCTAACGTG-GCTTACTGTTACGGCTTCGGGCGG-TAAAAGTTGGGGACGGAGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGAGCCAATATGCGACAATACTGATTTGTTTTTACAGCTGACACCAATGT--------TTTTTATACCATCAAGGGGGCAATAAAGCCATATGGCGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATTCCGTTCTAATTAATTTA
gi|143747 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGC--A--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-GCTGT-G-ATCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCC-GAAAATG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--A-TCATGCGTGCCGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTG----CGATTACTTGGATACGATCCTGTGC-GGTGCGCTAATGTG-GCTTACCGTTATTGCATCGGGAGGTTATAAGTTTGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCTGGGG-TATATGGACTAATCAAATGCACGCG----------ACAATACTGATTTGTTTTTACAGCTGACACC--TGTGAACGGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGCTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143748 : ATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTATGTGCA--GCAATATTATGCA-TGA-CATTAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-CCTGT-G-ATCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCC-GAAAATG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCCGGTTGTGATAA--CTGGCACC-GTAATAAA--------------TAATTGCGATTACTGGGATAGGATCCTGTGCGG-TGCGCTAATGTG-GCTTACCGTTAATGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAA-------------TTACAGCTGACACC--TTTGACCGGAATTGTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGTCTGTTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATATGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA
gi|143749 : ATATTTATACATTTATTTTTCAAG-GACCGGTTATTTATATTCGTGTTGCATAGTAGTCCGCGCA--GTAATATTATGCA-TTA-CACTAT---A-G-GCTAC-ATT-----------TGAA-----------AATAGCGTCCACTCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGGGAGATCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAATT-AT----A-TTTTCA-GGAAATG-TACAGCGGTCTATTT----TTTATATTTTTT--GAAA--AATCATGCGTGCCGTTAGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGACAGG
gi|143749 : CAGGCGGTTAGAAGTTGGGGACGGGGTGTC-GTAA-TCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGAGG-TATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--TCTGACCGGAATTTTTATACCATCAAGTTGGCAATAAAACTATATGGCGTCGCAGATCAGAATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATTTGTTCGTTTGTGAAAGATCCCGTTCTAATTAATTTAcggttagaagttggggacggggtgtcgtaatcatgtcagtttacagttcggcaatttaccaaagccgtgatatatgtcctgaggtatatggactaatcaaatgcacgcgccaatatgcgacaatactgatttgttttcacagctgacacctctgaccggaatttttataccatcaagttggcaataaaactatatggcgtcgcagatcagaatgatgtctgctggtcattataataaagtaattatttttttaattatttgttcgtttgtgaaagatcccgttctaattaattta
gi|143750 : atatttatacatttatttttcaaggaccggttatttatattcgtgttgcatagtagtccgcgcagtaatattatgcattacactataggctacatttgaaaatagcgtccactcgtaaatacccatgccagtgatcacgggagatcatggaattttccagaaagatctaggtcaattatattttcaggaaatgtacagcggtctattttttatattttttgaaaaatcatgcgtgccgttagtgataattgacacggtaataaatcaatgtttgttttgattgcgattactgggaATATTTATACATTTATTTTTCAAG-AACCGGTTGTTTATATTCGCGTGGCATAGCAGTCTGTGCA--GCAATATTATGCA-TGA-CACTAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAAACGT---A---AATA----C-------------CCAT-G-CCTGT-G-ACCACGCGAGGTCATGGAATT-----TTCTA------------GAA---------A--GATCTAGGTCAATT-CT----A-TTTTCC-GAAAATG-TACACCGATCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCGTGCTGGTTGTGATAA--TTGGCACC-GTAATAAAT-CAATGTTTGTTTTAATTGCGATTACTGGGATAGGATCCTGTGCGG-TGCGCTAATGTG-GCTTACCGTTATTGCCTCGGGAGGTTATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGTAATTTACCAAAGCCGTGATATTTGTCCT-GGGGTATATGGACTAATCAAATGCACGCGCCAATTTGCGACAATA
gi|143751 : ATATTTATACATTTATTTTTCAAG-GACCTGTTGTTTATATTCACGTGACATAGCAGTCCATTCA--GTACTATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TGAA-----------AATAGCGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGT-G-ATCACGCGAGGTCATGGTATT-----TTCTA------------GAA---------A--GATCTAGGTCAACT-CT----A-TATTCCAAAAAATG-TACACCGATCTA-TT----TTTATA-TTTTC--GAAA--AATCATGCGTGCCGGCTGTGATAA--TTGACGCG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGCGG-TGAGCTAACGTG-GCTTACCGTTATGACTTCGGGCGGTAATAAGTTGGGGACGGGGTGTC-GTAAATCA-TGTCAGTTTACCGTTCGGTAATTTACTAAAGCCGTGATATATATCCTGGGG
gi|143752 : ATATTT-CA-ATTTATTTTTCAAG-AACAAAATGTTTAAATTTGTGTAGCATTGCATTTTGGACA--GTTAAATTGTGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TCAA-----------TATAGCATCCAATCGT---A---AATA---------------------------GGT----TCACACGAGGTCATCAAATT-----GTTCA------------GA
gi|143753 : TTTA---ATTTATTTTTCAGA-TATCATAAGTTTATATTCGTGTAGTGCAACATTTCACAAA--GTAAATTTACGGA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGCATCTATTTGC---ACCTAGTG------------------TTAT-A-TCAGT-G-ACCACGTGATGTCATTGAATT-----
gi|143754 : TTATA----TATTTTTCAGA-GATTGTAAGTTTATATTCGTGTAGCGTAACATTTCAC------------TATGTA-TGATTACTATATAA-A-GTT----TTTA---------TAAA-----------AATAGCGTCTATTTGT---A---TATA----
gi|143755 : TATATATTTATTTTTCAAG-GACCG--------------TGTAGCATTGCAGTCCGCGCA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------TATAGCGTCCAATCAT---A---AAAA----C-------------CCAT-G-CCATT-G-ATCATGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTTGGTCAAAT-CT----A-TTTTCT-GAAAATG-TACATCAGTCTG-TT----TTTATA-TTTTT--GAAA--AATTATGCGTGCTGACTGTGATCA--ATGACATG-GTAATAAAT-CAATGTTTGTTTCGATTGCGATTACTGGGATCTGATCTTGTGT-GCTGC-----CGTGTGCTTACCGTTATGGTTTCGGG-GATACGAAGTTGGGGAGGGGGTGTC-CTAAATTA-TGTCACTTTATAGTTCGACAATTTACTAAAGCCGTGATATATGTCCT-GGGGTATAAGGAATAATGAAATGCACGTGCCAATATGCGACAATACTGATTTGTTTTCACAGTTGACACC--TGTGACCTGAATTTTTATACCACCAAGGAGGCA
gi|143756 : ATTTATTTTTCAAT-GACAGG-TGTTAATATTTGTGTAGCATTGCAGTTCGCGTA--GTAAAATTATGCA-TGA-CACCAT---A-G-GTTAC-ATT-----------TAAA-----------AATAGCGTCCAATTGT---A---AATA----C-------------TCAT-G-CCAGC-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GAAATACGTCAACT-CTT---A-TTTTCC-GAAAATG-TACATCGGCATA-TT----TTAATT-TTTTT--TAAA--AATCATGCGTGCTGACTGTGATAA--TTGACATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTAC-A-----CTAACATG-GCTTACCGTTATGGTTTTGGGCGGTAAGAAGTTGGGGAGGAAGTGTC-GTGAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGTCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCGCCAATATGCGACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACC------------ATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAAAAAGGTCATTA-TTTTTTTAATTATCTG-TCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143757 : ATTTATTTTTCAAG-GACCGGATGTTTATATTTGTGTAGCATTGCATTTCACACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGGGTC-------------ACAT----CAGT-G-ATCACGCGAGGTCATCGAATT-----GTCCA------------
gi|143758 : ATTTATTTTTCAGA-GATTGTAAGTTTATATT-GTGAAGTGCAACATTTCACAAA--GTAAATTTACATA-AGA-CATAAT---ATG-GTTACTATTTAAAGTTTTTATAAA-----------AATAGTGTCTATTTGT---A---CATGGT--G-------------TCAT-A-TCAGT-G-ACCATGCGATGTCATTGAATT-----GACCA------------GA
gi|143759 : ATTTATTTTTCAAG-AACCTGATCTTTATATTTGTGTAGCATTGCATTTCGCACA--GTTAAATTATGCA-TGA-CATCAG---A-G-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATAGG--G-------------TCAT-A-TCAGT-G-ACTAAACGAAGTCATCAAATT-----GTCCA------------GA
gi|143760 : ATTTATTTTTCAAG-AACCGGATGTTTATATTCGTGTAGCATTGCATTT--TGCA--GTTAAATTATGCA-CGA-CATCAG---A-G-TTTAG-AAT-----------TTAA-----------TATAGCGTCGAATCGT---A---AATAGG--G-------------TCAT-A-TCAGT-G-ATCACGCGAGGTCTTCGAATT-----GTCCA------------GA
gi|143761 : ATTTATTTTTCAGA-GATCGTAAGTTTATATTCGTGTAGCATAACATTTCACAAA--GTAAAGTTATGCA-AGA-CATCAT---ATG-GTTACTATTTAAAGATTTTATAAA-----------AATATCGTCTATTTGTATAA---AGTG------------------TCAT-A-TCAGT-G-ACCATGCGAGGTCATTGAATT-----
gi|143762 : TTTTTTTTTCAAG-GACAGGATGTTTATATTTGTGTAGCATTGCATTTCACATA--GTAAAATTATGCA-TGA-CATCAG---A-C-GTTAG-AAT-----------TAAA-----------TATAGCGTCCAATCGT---A---AATA----GGG-----------TCAT-A-TCAGT-G-ATCATGCGAGGTCATCGAATT-----GTCCATGCTTGC-----GCG---------G--GA-CTAACAAAAAT-CTCCACA-TTTTC-----AAT-------CGGCATA-TT----TTGATT-TTTTTTTGAAA--AATCATGCATGCTGACTG--ATAA--TTGCCATG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTAC-G-----CTACTTTG-GCTTATCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGGGTGTT-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCACAGCCATGATATATGTCCTGGGGGTATATGGACTAATCAAATGCACGCACCAATATGCGACAATACTGATTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTGTATACCATCAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGTCATTATAATAAGGTAATTA-TTTTTTTAATTATCTGTTCGTTTGTGAAAGACCCTGTTCTAATTAATTTA
gi|143763 : TTTGTTTTTCAAG-GACCGGTTGTTTGTATTCATGTAGCACTGCAGTCCGCGCA--GTAAAATAATACA-TGA-TACCAT---A-G-
gi|143764 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAGTAACAATTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGGTCAAGCGAGGTCATCGCCCAGTCGCATTATGTAAAGTGCTAGAATT-----TTCCATGATTTGCGCGGGAATCTAAAAATA--AATCGGGGTCAAATACA----A-TTTTCT-GAAAACA-GA-ATCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCGG--GTGACCT--TTGGCA-G-AAAATAAAA-CTATGTT
gi|143765 : TTCATTTTCC--GCGACAGGAAGTTTACATTTGTGTAAAATAACATTTCCCCAA--GTAAAATTACCCA-TGA-CATCAT---A-GTGTTACTATTTAAAGTTTTTATAAA-----------AATAGCGTCCAATCGA---A---CATA----CGGG----------TCAA-G-C--GT-G-ATCAAGCAAGGTCAT
gi|143765 : GGAAT--------CTA------------AAA---------ATAAATCAGGGTCAAATACA----A-TTTTCT-GAAAACA-GA-AGCAGTCTA-TT----TTCGTG-TTTTT--GGAA--A--TGTGCATCCCG--CGTGACCT--TTGGCA-G-AAAATAAAA-CTATGTTTcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgggaatctaaaaataaatcagggtcaaatacaattttctgaaaacagaagcagtctattttcgtgtttttggaaatgtgcatcccgcgtgacctttggcagaaaataaaactatgttt
gi|143766 : ttcattttccgcgacaggaagtttacatttgtgtaaaataacatttccccaagtaaaattacccatgacatcatagtgttactatttaaagtttttataaaaatagcgtccaatcgaacatacgggtcaagcgtgatcaagcaaggtcatcgcccagtcgcattatgtaaagtgctagaattttccatgatttgcgcgGTTTACATTTGTGTAAAATAGTATTTC-CTCAAAGTAAAATTAC-CAGTTA-CATCAT---A-GTGTTACTATT-----------TAAAGTTTTTATAAAAGTAGTGTCCAATCGC---ACGTAAGG----G-------------TCAT-G-T--GT-G-ATCAAGCGAGGTCAT
gi|143766 : GGTCAAAT-CC----AATTTTCT-GAAAACA-CAAAGTAGTCTA-TTTATGTTTGTT-TTTTT--TTAA--A--TGTGCATCCTG--TGTGACCT--TTGACAGGAGTAATAAAA-CTATGTTTcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggggtcaaatccaattttctgaaaacacaaagtagtctatttatgtttgtttttttttaaatgtgcatcctgtgtgacctttgacaggagtaataaaactatgttt
gi|143767 : gtttacatttgtgtaaaatagtatttcctcaaagtaaaattaccagttacatcatagtgttactatttaaagtttttataaaagtagtgtccaatcgcacgtaagggtcatgtgtgatcaagcgaggtcatcgctgagtcacattttgtaatgtcctggaatttttcatgatttgcgcacgaatccaaaaataaattgggT---A-G-GTTAC-ATT-----------TAAA-----------AATAGTGTCCAATCGT---A---AATA----C-------------CCAT-G-CCAGC-G-ATCACGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GAAATAGGTCAACT-CT----A-TTTTCC-GAAAATG-TACATTGGCATA-TT----TTGATT-TTTTT--GAAA--AATCATGCGTGCTGACTGTGATAA--TTGACACG-GTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGAATCATGTAC-A-----CTACCGTG-GCTTACCGTTATGGTTTCGGGCGGTTAGAAGTTGGGGAGGGTGTGTC-GTAAATTA-TGTCAGTTTGCAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGGGTATATGGACTAATCAAATGCAGGCGCCAATATGCAACAATACTGGTTTGTTTTCACAGCTGACACC--CGTGACCGGAATTTTTATACCATGAA-GGGGCAATAAAACTATAAGGCGTCCCAGATCAGCATGATGTCTGCTGGCCATTATAATAAGGTAATT
gi|143768 : -ATT-----------TAAG-------------CGGTGTCCAATCGT---A---AAT------------------------G-CCAGT-G-ATCACGTGAGGTTATGGTATT-----TTCCA------------GAA---------A--GATCAAGGTCAACT-TT----A-TTTTCC-AAAAATA-AACAGCAGTTTA-TT----TTTAT---TTTT--GAAA--AATCATGCGTGCTGATTGTGATGA--TTGACACG-TTAATAAAT-CAATGTTTGTTTTGATTGCGATTACTGGGATAGGATCCTGTGC-G-----CTACCCTG-GCATACCGTTTTAGCTTCGG-CAGTTAGAAGTTGGGGAGGGGGTGTC-GTAAATCA-TGTCAGTTTACAGTTCGGCAATTTACCAAAGCCGTGATATATGTCCTGGGG-TATATG-ATTAATCAAATGCACGCGCCAATATGCGACAATACTGATTT-----CACAGCTGACACC--TGTGACCAGAATTTTCATACCATCAAGGGGGCAATAAAACCATATGGCGTTGCAGATCAGCATGATGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCCTTCTAATTAATTTA
gi|143769 : ---A---AATA----C-------------CCAT-G-CCAGT-G-ATCATGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATATTGGTCAACT-TT----A-TTTTCC-GAAAATA-TACAGCGGTCTA-TT----TTTATA-TTTTT--GAAA--AATCATGCATTCTGACTG--ATAA--TTGACATG-GTAATAAAT-CAAAGTTTGTTTTGATTGTGACTACTGGGATAGGATC----GT-G-TGCGCTACTATG-ACTCACGTTTATGGCTTGGGGCAGTTAGAAGTTGGGGATGGGGTGTC-GTAAATTA-TGTCCGTTTACAGTTCCGCAATTTAACAAAGCTGTGATATATGCCCTGCTG-TATATGGACTAATCAAATGCACACGCAAATATGCGACAATACTGATCTGTTTTCACAGCTGACACC--TGTTACCAGAATTTTTATACCATCAAGGGGGCAATAAAACCATATGGCGTCGCAGATCAGAATGACGTCTGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCTATCTAATTAATTTA
gi|143770 : T-A-CCAGT-G-ATCAGGCGAGGTCATGGAATT-----TTCCA------------GAA---------A--GATCTAGGTCAAAT-CG----T-TTTTCT-GAAAATG-TACAGCAGTCTA-TTC---TTTATA-TTTTT---ATATTAATCATGCGTGCTGATTGTGATCA--TTGACACG-GTAATAATT-CAATGTTTGTTTTGATTGCGATAATT----TCGGATCTTGTGT----------------GCTTACCGTTTTGACTTCGGG-GATAAGAAGTTGGGGAGAGGGTGTCTGTATTCCACTGTCA
gi|143771 : CAGT-G-ATCACGCGAGGTCATTGAATT-----GTCCA------------GA
gi|143772 : GGAATTCCTGATTGTA------------GAA---------AA-GATCAAGGTCAAATTCC----A-TGTTCT-AAAAATGCTA-AACTGTATA-TT----TTTGTG-TTTTT--G-GT--AATTATGCATTCTAAATGTTAGAACTTTGGTAGA-GTAATATATGGAATGACTGTTT
gi|143773 : TGTCCTGGGG-TATATGGATTAATCAAATGCACGCACCAATATGCAACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACCGGAATTTTTATACCATCAAGGGGACAATAAAACTATATGGCGTCGCAGATCAGCATGATGTCTGCTTGTTATTATAATAAAGTAATTATTTTTTTTAATAACTTGTTCGTCTGTGAAAGATCCCGTTCTAATTAATTTA
gi|143774 : GACAATACTGATTTGTTTTTACAGCTGACACC--TGTGACGAGATTTTTTATACCATCAAGGGGGCAATAAAACCATATGGTGTCGCAGATCAGCATGATGGTCGCTGGTCATTATAATAAAGTAATTA-TTTTTTTAATTATCTGTTCGTCTGTGAAAGATCCCGTTTTAATTCATTTA