lowQualScore : 2 1 11111111111111 2222 4444444444444 222222 222 2222222222222222222 111111111111111111111 11111111111 111111 111111111
lowQualScore : 9 4 2 2 333 333 22222222222222 333 2222 22 2 2 4444444444444 22 22 8 1 999999 4 1 33333 0 1 1 1 555 44 666 4 2 1 22 1 2222222222222222222 2 444444444444444444444 2 44444444444 333 999999 4 55555 111111111 4 333
lowQualScore : . . . . ... ... .............. ... .... .. . . ............. .. .. . . ...... . . ..... . . . . ... .. ... . . . .. . ................... . ..................... . ........... ... ...... . ..... ......... . ...
lowQualScore : 9 8 0 7 555 777 44444444444444 777 5555 99 1 1 6666666666666 99 55 2 5 444444 6 5 88888 3 6 1 6 222 11 444 3 1 9 66 9 0000000000000000000 0 333333333333333333333 1 22222222222 444 999999 2 33333 666666666 8 777
consensus : TTTT-TTGGAAGGCGAGCAAAGC-TCT---GACTTCCTTAGCTGTC---GTGCAG--------------CC---CTAGC-AA-TCTGTT--A-TA-CA-N-------TACTACGT--ATGGCAGGAACCG--CCATATTCATCCGACCGAT-AAAGT-AG--TTC-ACAAGTTT-CAAAACGCA-----TTTGCCGTAGCAGAG-GACGTATTATACAACAAAAGAT-TCAAA-GTTTT--TTTATTTATTGCGGATATTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----G------ATA--CGGG-----AA-GCATACAATT-----TC-C------ATGGAAATG---CGGAAGAATACACTT
Reference ( gi|115489 ) : TTTTATTGGAAGGCGAGCGAAGC-TAT---GACTTCCTTAGCTGTC---GTGCAG--------------CT---CTAGC-A--TCTGTT--A-TA-CA-C-------TACTACGT--ATGGCAGGAACCG--CCATATCCGTCCGACCGAT-AAAG--AA--TTC-ACAAGTTT-CAAAACGCA-----TTTACCGTAGCAGAG-GACGTATTATACAACAAAAGAT-TCAAA-GTTTT--TTTAAATATTGCGGATATTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----A------ATA--CGGT-----AA-GCATACAATT-----TG-C------ATGGAAATG---CGGAAGAATACACTT
gi|115488 : TTTTATTGGAAGGCGAGCAAAGC-TCT---GACTTCCTTAGCTGCT---GTTCAG--------------CT---CTAGC-A--TCTGTT--A-TA-CA-C-------TACTATGA--ATGGCAGGAACCG--CCATATCTGTCCGACCGAT-AAAG--AG--TTC-ACAAGTTT-CAAAACACA-----TTTACCGTAGCAGAG-GACGTATTATACAACAAAAGAT-TCAAA-G-TTT--TTTAAATATTGCGGATATTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----G------ATA--CAGG-----AA-GCATACAATT-----TG-C------ATGGAAATG---CGGAAGAATACACTT
gi|115487 : TTTT-TTGGAAGGCGAGCAAAGC-TCT---GACTTCTTTAGCTGTC---GTGCAG--------------CT---CTAGT-A--TCTGTT--A-TA-CA-C-------TACTTCGT--ATGGCAGGAACCG--CCATATCCGTCCGACCGAT-AAAG--AG--TTC-ACAAGTTT-CAAAACGCA-----TTTACCATAGCAGAG-GACGTATCATACAACAAAAGAT-TCAAA-G-TTT--TTTAAATATTGCGGATATTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----G------ATA--CGAG-----AA-GCATACAATT-----TG-A------ATGGAAATG---CGGAAGAATACACTT
gi|115490 : TTTT-TTGGAAGGCGAGCAAAGC-TCT---GACTTCCTTAGCTGTC---GTGCAG--------------CT---CTAGC-A--TCTGTT--A-TA-CA-C-------TACTACGT--ATGGCAGGAACCG--CCATATCCGTCCGACCGAT-AAAG--AG--TTC-ACAAGTTT-CAAAATACA-----TTTACCGTAGCAGAG-GACTTATTATACAACAAAAGAT-TCAAA-G-TTT--TTTAAATATTGCGGATAATT-TTA----TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----G------ATA--CGGG-----AA-GCATACAATT-----TG-C------ATGGAAATG---CTGAAGAATACACTT
gi|115491 : TTTT-TTGGAAGGCGAGTCGAGC-TCT---GACTTCCTTAGCTGTT---GTGCAG--------------CT---CTAGC-A--TCTGTT--A-TA-CA-C-------TACTACGT--ATGGCAGGAACCG--CCATATCCGTCCGACCGAT-AAAG--AA--TTC-ACAAGTTT-CAAAATGCA-----TTTACAGTAGCAAAG-GACGTATTACACAACAAAAGAT-TCAAA-G-TTT--TTTAAA-ATTGCGGATATTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----G------ATA--CGGG-----AA-GCATACAATT-----TG-C------ATGGAAATG---CGGATGAATACACT
gi|115492 : TTTT-TTGGAAGGCGAGCAAAGC-TCT---GACTTCCTTAACTGTC---GTGCAG--------------CT---CCAGCAA--TCTGTT--A-TA-CA-A--------ACTATGT--ATGGCAGGAACCG--CCATATTCATCCGACCGAT-AAAGT-AG--TTC-ATAACTTT-CAACACGCA-----TTTACCTTAGCAGAG-GACGTATTATACAACAAGAATT-TCAAA-G-TTT--TTTATTTATTGCGGATGTTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----G------ATA---GGG-----AA-GCATGCAATT-----TG-C------ATGGAAATG---CGGAAGACTACACTTaat
gi|115493 : TTTT-TTGGAAGGCGAGCAAAGC-TCT---GACTTCCTTAGCTGTT---GTGCTG--------------CC---CCAGCAA--TCTGTT--A-TA-CA-A--------ACTACAT--ATGGCAGGAACCG--CCATATTTATCTGACCAAT-AAAGT-AG--TTC-ACAACTTT-CAACACGCA-----TTTACTGTAGCAGAG-GACGTATTATACAACAAAAGTT-ACACA--TTTT--TTTATTTATTGCGGATGTTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAT----G------ATA--CGGG-----AA-GCATACAATT-----TG-C------ATGGAAATG---CGGAAGAATACat
gi|115494 : TTTT-TTGGAAGGCGAGCAAAGC-TCT---GACTTCCTTAGCTGTT---GTGTAG--------------CC---CTAGC-AA-TCTGTT--A-TA-AA-GG------TA--ACGT--ATGGCAGGAATTG--CCATATTCATCCGACCGAT-AAAGT-AG--TTC-ACAAGTTT-CAAAACGCA-----TTTGCCGTAGAAGTG-GACGTATTATATAACAAAAGAT-TCAAA-GTTTT--TTTATTTATTGCAGATTTTT-TTC--T-GT-----------A-------TA-AA-----AA-----T--------CC-AAAGATAC----G------ATA--CGTG-----AA-GCATACAATT-----TC-C------ATTTAAATG---TGGAAGAATACACTT
gi|115495 : TTTT-TTGGAAGGCGAGCAAAGC-TCC---GACTTCCTTAGCTGTC---GTGTTG--------------CC---TTAGCAA--TCTGTT--ATTA-AG-G-------TA--ACGT--ATGGTAGGAACCG--CCATATTCATCCGACTGAT-AAGT--AG--TTC-AAAAGTTT-CAAAACGCA-----TTTGCCGTAGAAGAG-GACGTTTTATACAGCAAAAGAT-TCAAA-GTTTT--TTTATTTATTTTGGATTTTT-TTC--T-GT-----------A-------TA-GA-----AA-----T--------TT-ATAGATAC----G------ATA--CGTG-----AA-GCATACACTT-----T--CTA----AT--AAATG---CAGAAGAATACACTat
gi|115496 : TTTT-TTGGAAGGCAAGCAAAGC-TCT---GACTTCCTTAGCTGTT---GTGCAG--------------CT---CTAGC-AA-TCTGTT--A-TA-AA-TG------TA--ACTT--TTGGCAGGAACCG--CCATATTCATGCGACTGAT-AAAGT-AG--TTC-ACAAGTTT-CAAAATGCA-----TTTGCCGTAGAAGAG-GACGTATTATACAACAAAAGAT-TCAAA-GTT
gi|115497 : TTTTGT-GGAAGGCGAGCATAGC-TCT---GACTTCCATTGCTGTC---GTGCAG--------------CC---CTAGCAA--TCTGTT--A-TA-AAGG-------TA--ACGT--ATGACAGGAACCG--CCATATTCATCCGACCGAT-AAAGT-AG--TTC-ACAAGTTT-CAAAATGCA-----ATTGCCGTA-CAGAG-GACGTATTGCACAACAAAAGAT-T
gi|115498 : TTTT-TTGGAAGGCGCGCAAAGC-TCT---GACTTCATTGTCTG
gi|115500 : TTT-TTGGAAGGCGAACGAAGC-TCT---GACTTCCATAGCTGTC---GTGCAG--------------CC---CTAGC-AA-TATGTT--A-TA-CA-AGG-----TA--ACAT--ATGACGGGAATCG--CCATATCCATCCGACCGAT-AAAAGTAG--TTC-ACAAGTTT-CAAAACGCA-----TTTTCCGTAGCAGAG-GACATATTATACAACAAAAGAT-TCAAA-GTTTT--TTTATTTATTGCGGACTTTT-TTC--T-GT-----------A-------TA-AA-----TA-----T--------TC-AACAATAC----G------ATA--CGGC-----AA-GCATACAATT-----TC-C------ATGGACATG---CGGAAGAATACAC
gi|115501 : TTT-TTGGAAAGCGAGAGAAGT-T-T---GACGTCCTTAGGTGTC---GTGTAG--------------CC---CTAGC-AA-TCTGTT--A-TA-AA-GG------TA--ACGT--ATGGCAGGAACCG--CCATATTCATCCGACTGAT-AAAG-------T-----AGTTT-CAAAAAGCA-----TTTGCCGTAGAAGAG-GACGTATTTTACACCAAAAGAT-TCTAT-TTTTT--TTTATTTATTGTAGAT-TTT-TTC--T-GT-----------A--------A-AA-----AA-----T--------TC-AAAGATAC----G------ATA--CGTG-----AA-GCATACAATT-----TC-C------ATTTAAATG---CGGAAGAATATACTT
gi|115502 : TTT-TTGGAAGGTGAGCAAAGC-TCT---GATTTCCTAAGCTGTC---GTGCAG--------------CC---CTAAC-AA-TCTGTA--A-TA-AA-GG------TA--ACGT--ATGGCAGGAACCG--CTATATTCATCTGACCGAT-AAAGT-AG--TTC-ACAAGTTT-CAAAATGCA-----TTTGCTGACGAAGAG-GATGTATTATACAACAAAATAT-TCAAA-GTTTT--TTat
gi|115503 : TTT-TTGGAAGGTGAGCAAAGC-TCT---TACTTCCTTAGCTGTC---GTGCAG--------------CC---CTAGC-AG-TCTGTT--A-TA-AAGG-------TA--ACAT--ATGACAGGAATTG--CCATATTCATCCGACCGAT-AAAGT-AG--TTC-ACAAGTTT-CAAAATGCA-----
gi|115504 : TTT-TTGGAAGGCCAGCATAGCATAT---GCCTTTTGTAGCTATC---GTGTGGAGTACAATTTCGTTCT---ATAAC-C--TCTGTT--A-TA-C---------------TGT---TGACGACAATT---TCATTTCC-TCTGACCGAT-AAAATAGA--TCC-AACAGTTT-CAAAAAGCAAAAATTTTGACATAACAGAG-TACGTA-----------GAGAT-GAAAATGTTAT--TTTA----TTGCG---ATTT-TTG--T-TTTATCAA-----A-------CA-GA-----AAAACTCT--------TC-AAATATGC----G------GTA----GTC----AATGCATACAATT-----TC-C------AATAAAATG---
gi|115499 : TTATTGGAAGGCGAGCAAAGC-CCT---GACTTCCTTAGCTTTC---GTGCAG--------------CC---CCAGCAA--TCTGTT--G-TA-CA-A--------ACTATGT--ATGGCAGGAACCG--CCATATTCATCCGACAGAT-AAAGT-AG--TTC-ACAACTTT-CAACACGCA-----TTTACCATAGCAGAG-GACGTATTATACAACAAAAGTT-TCAAA-G-TTT--TTTATTTATTGCAGATATTT-TTC--T-TT-----------A-------CA-AA-----AG-----T--------TC-AAAAATAC----G------ATA--CGGG-----AA-GCATACAGTT-----TC-C------ATGGAAATG---CGGAAGAATACACTT
gi|115505 : TTATTGGAAGGTGAGCATAGC-GAT---GCCTTCTATATAAGTCACAGTGCGA--------------CTGATTTA-C-AATTTTGTTCAA-TAACA-TAATGTTATACT--GTTGATGGC------CATTCCATTTCC-TTCGACCGAT-AAAGTAAG--TCC-AAAATATT-CAAATTGCA-----ACTGCCATAGCAGAG-GA-------------AATAGGTATCCAA-ATTTG--TT------TTGC-GATTTTTGTTC--TATT-----------AAACAGCGCA-AAAC---AC-----T--------TC-AAATATGC----G------GTA---GTT-----AATGCATACAATT-----TC-C------ACTAAAATG---at
gi|115507 : TTGGAAGGCCAGCAAAGC-TCT---GACTTCCTTAGCTGTT---GTGCTG--------------CC---CTAGC-AA-TCTGTT--A-TA-CA-A--------ACTATGT--ATGGCAGATCCTG--CCATATTCATTTGCCCGAT-AAAGT-AG--TTC-ACCACTTT-CAA--CGCA-----TTTACTGCAGCAGAG-GCCGTATTATGCAACAAAAGTT-TCAAA-GTTTT--TT-ATTTATTGCGGATATTT-TTC--T-TT-----------A-------CA-AA-----AG-----C--------TC-AAAAATAT----G------ATA--CGGG-----AA-GCATACAATT-----TC-A------ATAGAAATG---CGGAAGAATACACTT
gi|115506 : tTTGAACGGTAAGCAAA---TATCTTGACTTCCATAGCTATC---GTGCAG--------------CC---ATAGC-AA-TCTGTT--A-TA-CA-A-------GA-TACGT--ATGACAGGAACCG--CCATATTCATCCGACTAAT-AAAGT-AG--ATA-GCAAGTTT-CAAAACGCA-----TTTGCTGTAGCAGAG-GACGTATTATACAACAAAAGAT-TCA----TTTT--TTTATTAATTGCGGATTTCT-TTC--T-TT-----------A-------CA-AA-----AA-----A--------TC-AAAGATTC----G------ATA--CGGG-----GA-GCACACAATT-----TC-C------ATGGAAATG---TGGAAGAATACACTat
gi|115508 : ttACCG--CGATATTCATCCAACCGAT-AAAAT-AG--TCC-ACAAGTGT-CAAATCGCA-----TTTGCCATAGCAGAG-GCCGTGTTATACAATAAGAAGT-TT----GTCTT--TTaat
gi|115509 : ACCG--TGACAGTCATTCAACTGAT-AAA----A--T------AGTTTGCAA--CACA-----TTTTCCATAGCAGAG-GACATTTTATAGAATAAAAGAT-TCAAA-GCTTTA-TTT---TATTGCG---ATTT-GT---T-TT-----------GCGAC---CA-AACAGGGAG---------------CAAAAAACAC----AGATGCCATA--CTGA-----AA-GCATTCAATTATCACTGAT------ATAGAAATG---CAGAAGACTACACa
gi|115510 : G--CGATATTCATCCGCCCGAT-AAAAT-AG--TTC-ACAAGCTT-CAAAAAGCA------GCACTCTAGTAAAGCTTCGTATTA
gi|115511 : CATTTCCG-CCGACCGAT-AAAA--TAGCTCC-GAAAGTTT-CAAAATGCA-----ATTGCCATAGCACAG-GACGT-----------AGAGAT-CCAA---TTTCGATTT---TATTAC---TAGTT-TTG--T-CC-----------GAT-----CA-AAGAG--AG-----A--------GC-AAAAACACTTCAA------ATATGCGGTAGTAAAA-GCATACAATT-----TC-C------AGTAAAATGACATGAAAGAGTAC
gi|115512 : CATTTCC-TCTGACCAAT-AAAAT-AG--TTCCAAAAGTTC-CAAAGCGCA-----ATTGCCATAGCAGAG-G-----TTGC------AGAGAT-TTAAA-TTTGA--TTT---TATTGCA---ATTT-TTG--T-TTTTAAATATCAAA-------CAGAA-----AG-----CAAAACACATC-AAATATGC----A------GTA----GTCA---AA-GTATACAATT-----TT-C------AC-TAAATG---
gi|115513 : ATTTCC-TCCGACCGAT-AAAAT-AG--TTCCAAAAGTTT-CAAAACGAA-----ATTACCATAGCAGAG-GAAGT-----------AGAGAT-CCAAA-TTTAC--TTT---TATTGCG----TTT-TTC--G-TT-----------
gi|115514 : TCCGACCGATTAAAT--AG--TTCCAAAAGTTT-CAAAGCGCG-----ATTACCATAGCAGAG-GACGT-----------AGAGAT-CCAAA-TCTGA--TTT---TATTGCG---ATTT-TTG--T-TT-----------G-------CG-A
gi|115515 : GTATTATACAATAAGAGAT-TCAAA-GTTTT------AATGTT----ATATCA-AACAGA-GT-----------G-------CA-AA-----AAC----T--------TC-AAAGATGC----G------ATA--CGGA-----AC-GCGCACAATT-----TC-CACTTATATTGAAATT---TTGAAGACTACACCT
Alignments
lowQualScore : 222222222222222 222222222222222222222 11111111111111111
lowQualScore : 3 1 1 333 333 22 4 4 55555 2 1 888888888888888 333 22 22 1 0 1 1 4 22 33333 22 666 6666666 22 2 3 1 1 5555 111111111111111111111 1 99999 66666666666666666 6666666 4 2 55555 555555 2 333
lowQualScore : . . . ... ... .. . . ..... . . ............... ... .. .. . . . . . .. ..... .. ... ....... .. . . . . .... ..................... . ..... ................. ....... . . ..... ...... . ...
lowQualScore : 8 9 9 555 555 88 0 0 00000 0 6 666666666666666 555 88 44 5 1 5 5 4 00 77777 11 999 6666666 55 5 8 8 8 7777 555555555555555555555 9 88888 22222222222222222 5555555 0 0 00000 888888 4 555
consensus : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-ACA-N---------TACTAC---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
Reference ( family-656 ) : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-ACA-N---------TACTAC---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115487 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCTTTAGCTGTC---GTGCAGCT---CTAG--TA-TCT-GTT-----AT-ACA-C---------TACTTC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAACGCA-----TTTACCATAGCAGAGGACGTATCATACAACAAAAG--ATTCAAA-GTTTTTTAA--AT---ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGAGAA-GCATACAATT-TG-----A------ATGGAAATG---CGGAAGAATACACTT
gi|115488 : TTTTATTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGCT---GTTCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAT---GA--ATGGCAGGAACCG--CCATATCTGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAACACA-----TTTACCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTAA--AT---ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACAGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115489 : TTTTATTGGAAGGCGAGCGAAGC-TAT-GACTTCCTTAGCTGTC---GTGCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-A-TTC-AC--AAGTTTCAAAACGCA-----TTTACCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--AA-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACAATACGGTAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115490 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAATACA-----TTTACCGTAGCAGAGGACTTATTATACAACAAAAG--ATTCAAA-G-TTTTTTA--AA-T-ATTG--CGGATAATT-TT-A-----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CTGAAGAATACACTT
gi|115491 : TTTT-TTGGAAGGCGAGTCGAGC-TCT-GACTTCCTTAGCTGTT---GTGCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-A-TTC-AC--AAGTTTCAAAATGCA-----TTTACAGTAGCAAAGGACGTATTACACAACAAAAG--ATTCAAA-GTTTTTTAA--A----ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGATGAATACACT
gi|115492 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAACTGTC---GTGCAGCT---CCAG--CAATCT-GTT-----AT-ACA-A----------ACTAT---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AT--AACTTTCAACACGCA-----TTTACCTTAGCAGAGGACGTATTATACAACAAGAA--TTTCAAA-G-TTTTTTA--TT-T-ATTG--CGGATGTTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATA-GGGAA-GCATGCAATT-TG-----C------ATGGAAATG---CGGAAGACTACACTTaat
gi|115493 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGCTGCC---CCAG--CAATCT-GTT-----AT-ACA-A----------ACTAC---AT--ATGGCAGGAACCG--CCATATTTATCTGACCAATAAA-GTA-G-TTC-AC--AACTTTCAACACGCA-----TTTACTGTAGCAGAGGACGTATTATACAACAAAAG--TTACACA--TTTTTTTA--TT-T-ATTG--CGGATGTTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATATGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACat
gi|115494 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGTAGCC---CTAG--CAATCT-GTT-----AT-AAA-GG--------TA--AC---GT--ATGGCAGGAATTG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGAAGTGGACGTATTATATAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CAGATTTTT-TT-CT----GT-----------A---------TA-AA-----AA--------T--------CCAAAG-------ATACGATACGTGAA-GCATACAATT-TC-----C------ATTTAAATG---TGGAAGAATACACTT
gi|115495 : TTTT-TTGGAAGGCGAGCAAAGC-TCC-GACTTCCTTAGCTGTC---GTGTTGCC---TTAG--CAATCT-GTT-----ATTAAG-G---------TA--AC---GT--ATGGTAGGAACCG--CCATATTCATCCGACTGATAA--GTA-G-TTC-AA--AAGTTTCAAAACGCA-----TTTGCCGTAGAAGAGGACGTTTTATACAGCAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTT--TGGATTTTT-TT-CT----GT-----------A---------TA-GA-----AA--------T--------TTATAG-------ATACGATACGTGAA-GCATACACTT-TC-----T------A-ATAAATG---CAGAAGAATACACTat
gi|115496 : TTTT-TTGGAAGGCAAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGCAGCT---CTAG--CAATCT-GTT-----AT-A-A-A---------TGTAAC---TT--TTGGCAGGAACCG--CCATATTCATGCGACTGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----TTTGCCGTAGAAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTT
gi|115497 : TTTT-GTGGAAGGCGAGCATAGC-TCT-GACTTCCATTGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-AAA-GG--------TA--AC---GT--ATGACAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----ATTGCCGTA-CAGAGGACGTATTGCACAACAAAAG--ATT
gi|115498 : TTTT-TTGGAAGGCGCGCAAAGC-TCT-GACTTCATTGTCTG
gi|115499 : TTA-TTGGAAGGCGAGCAAAGC-CCT-GACTTCCTTAGCTTTC---GTGCAGCC---CCAG--CAATCT-GTT-----GT-ACA-A----------ACTAT---GT--ATGGCAGGAACCG--CCATATTCATCCGACAGATAAA-GTA-G-TTC-AC--AACTTTCAACACGCA-----TTTACCATAGCAGAGGACGTATTATACAACAAAAG--TTTCAAA-G-TTTTTTA--TT-T-ATTG--CAGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAGTT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115500 : TTT-TTGGAAGGCGAACGAAGC-TCT-GACTTCCATAGCTGTC---GTGCAGCC---CTAG--CAATAT-GTT-----AT-ACA-AGG-------TA--AC---AT--ATGACGGGAATCG--CCATATCCATCCGACCGATAAAAGTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTTCCGTAGCAGAGGACATATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGACTTTT-TT-CT----GT-----------A---------TA-AA-----TA--------T--------TCAACA-------ATACGATACGGCAA-GCATACAATT-TC-----C------ATGGACATG---CGGAAGAATACACat
gi|115501 : TTT-TTGGAAAGCGAGAGAAGT-T-T-GACGTCCTTAGGTGTC---GTGTAGCC---CTAG--CAATCT-GTT-----AT-AAA-GG--------TA--AC---GT--ATGGCAGGAACCG--CCATATTCATCCGACTGATAAA-GTA-G-TT-----------TCAAAAAGCA-----TTTGCCGTAGAAGAGGACGTATTTTACACCAAAAG--ATTCTAT-TTTTTTTTA--TT-T-ATTG--TAGAT-TTT-TT-CT----GT-----------A----------A-AA-----AA--------T--------TCAAAG-------ATACGATACGTGAA-GCATACAATT-TC-----C------ATTTAAATG---CGGAAGAATATACTT
gi|115502 : TTT-TTGGAAGGTGAGCAAAGC-TCT-GATTTCCTAAGCTGTC---GTGCAGCC---CTAA--CAATCT-GTA-----AT-AAA-GG--------TA--AC---GT--ATGGCAGGAACCG--CTATATTCATCTGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----TTTGCTGACGAAGAGGATGTATTATACAACAAAAT--ATTCAAA-GTTTTTTat
gi|115503 : TTT-TTGGAAGGTGAGCAAAGC-TCT-TACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAGTCT-GTT-----AT-AAAGG---------TA--AC---AT--ATGACAGGAATTG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----
gi|115504 : TTT-TTGGAAGGCCAGCATAGCATAT-GCCTTTTGTAGCTATC---GTGTGG-------AGTACAATTTCGTT-----CT-ATA-ACCTCTGTTATACT-----GT---TGACGACAATT---TCAT-TTCCTCTGACCGATAAA-ATA-GATCC-AA--CAGTTTCAAAAAGCAAAAATTTTGACATAACAGAGTACGTA-----------GAG--ATGAAAATGTTATTTTA--------TTG--CG---ATTT-TTGTT----TT-----------AT--------CA-AAC----AGAAAAACTCT--------TCAAAT-------ATGCGGTA-GTCAATGCATACAATT-TC-----C------AATAAAATG---
gi|115505 : TTA-TTGGAAGGTGAGCATAGC-GAT-GCCTTCTATATAAGTCACAGTGCGACTGATTTA---CAATTTTGTTCAATAAC-ATA-A---------TGTTATACTGTTGATGGC------CATTCCAT-TTCCTTCGACCGATAAA-GTAAG-TCC-AA--AATATTCAAATTGCA-----ACTGCCATAGCAGAGGA-------------AATAGGTATCCAAA------TTTG--TT----TTG--C-GATTTTTGTT-CTA---TT-----------AAACAGCG--CA-AAAC---AC--------T--------TCAAAT-------ATGCGGTA-GTTAATGCATACAATT-TC-----C------ACTAAAATG---
gi|115506 : TT-TTGAACGGTAAGCAAATA-TCTTGACTTCCATAGCTATC---GTGCAGCC---ATAG--CAATCT-GTT-----AT-ACA-A---------GA-TAC---GT--ATGACAGGAACCG--CCATATTCATCCGACTAATAAA-GTA-G-ATA-GC--AAGTTTCAAAACGCA-----TTTGCTGTAGCAGAGGACGTATTATACAACAAAAG--ATTCA----TTTTTTTA--TT-A-ATTG--CGGATTTCT-TT-CT----TT-----------A---------CA-AA-----AA--------A--------TCAAAG-------ATTCGATACGGGGA-GCACACAATT-TC-----C------ATGGAAATG---TGGAAGAATACACT
gi|115507 : T-TTGGAAGGCCAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGCTGCC---CTAG--CAATCT-GTT-----AT-ACA-A----------ACTAT---GT--ATGGCAGATCCTG--CCATATTCATTTGCCCGATAAA-GTA-G-TTC-AC--CACTTTCAA--CGCA-----TTTACTGCAGCAGAGGCCGTATTATGCAACAAAAG--TTTCAAA-GTTTT-TTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------C--------TCAAAA-------ATATGATACGGGAA-GCATACAATT-TC-----A------ATAGAAATG---CGGAAGAATACACTTaat
gi|115508 : ACCG--CGATATTCATCCAACCGATAAA-ATA-G-TCC-AC--AAGTGTCAAATCGCA-----TTTGCCATAGCAGAGGCCGTGTTATACAATAAGAA--GTTT----GTCTTTTat
gi|115509 : ACCG--TGACAGTCATTCAACTGATAAA-ATA-G-TTT-GC--AA---------CACA-----TTTTCCATAGCAGAGGACATTTTATAGAATAAAAG--ATTCAAA-GCTTTAT----TT-T-ATTG--CG---ATTT-GT--T----TT-----------GCGAC-----CA-AACAGGGAG------------------CAAAAAACACAGATGCCATACTGAAA-GCATTCAATTATCACTGAT------ATAGAAATG---CAGAAGACTACACa
gi|115510 : G--CGATATTCATCCGCCCGATAAA-ATA-G-TTC-AC--AAGCTTCAAAAAGCA-----
gi|115511 : CAT-TTCCGCCGACCGATAAA-ATA-G-CTC--CGAAAGTTTCAAAATGCA-----ATTGCCATAGCACAGGACGT-----------AGAG--ATCCAA-----TTTCGAT-TT-T-ATTA--C---TAGTT-TT-GTCCGATC-----------AAAGAGAGAGCA-AA-----AACAC-----T--------TCAAAT-------ATGCGGTAGTAAAA-GCATACAATT-TC-----C------AGTAAAATGACATGAAAGAGTACgcactctagtaaagcttcgtatta
gi|115512 : CAT-TTCCTCTGACCAATAAA-ATA-G-TTCCAA--AAGTTCCAAAGCGCA-----ATTGCCATAGCAGAGG-----TTGC------AGAG--ATTTAAA-----TTTGAT-TT-T-ATTG--CA---ATTT-TT-GT----TTTTAAATATCAAA---------CAGAA-----AG--------CAAAACACATCAAAT-------ATGCAGTAGTCAAA-GTATACAATT-TT-----C------AC-TAAATG---
gi|115513 : TTCCTCCGACCGATAAA-ATA-G-TTCCAA--AAGTTTCAAAACGAA-----ATTACCATAGCAGAGGAAGTA-----------GAG--ATCCAAA------TTTACTTT-T-ATTG--CG----TTT-TT-CG----TT-----------
gi|115514 : atTCCGACCGATTAA-ATA-G-TTCCAA--AAGTTTCAAAGCGCG-----ATTACCATAGCAGAGGACGTA-----------GAG--ATCCAAA-----TCTGA--TT-TTATTG--CG---ATTT-TT-GT----TT-----------G---------CG-A
gi|115515 : GTATTATACAATAAGAG--ATTCAAA-GTTTTAATG--TTAT-ATCAAACAGAG---------------T-----------G---------CA-AA-----AAC-------T--------TCAAAG-------ATGCGATACGGAAC-GCGCACAATT-TC-----CACTTATATTGAAATT---TTGAAGACTACACCT
Alignments
lowQualScore : 222222222222222 222222222222222222222 11111111111111111
lowQualScore : 3 1 1 333 333 22 4 4 55555 2 1 888888888888888 333 22 22 1 0 1 1 4 22 33333 22 666 6666666 22 2 3 1 1 5555 111111111111111111111 1 99999 66666666666666666 6666666 4 2 55555 555555 2 333
lowQualScore : . . . ... ... .. . . ..... . . ............... ... .. .. . . . . . .. ..... .. ... ....... .. . . . . .... ..................... . ..... ................. ....... . . ..... ...... . ...
lowQualScore : 8 9 9 555 555 88 0 0 00000 0 6 666666666666666 555 88 44 5 1 5 5 4 00 77777 11 999 6666666 55 5 8 8 8 7777 555555555555555555555 9 88888 22222222222222222 5555555 0 0 00000 888888 4 555
consensus : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-ACA-N---------TACTAC---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
Reference ( family-656 ) : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-ACA-N---------TACTAC---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115487 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCTTTAGCTGTC---GTGCAGCT---CTAG--TA-TCT-GTT-----AT-ACA-C---------TACTTC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAACGCA-----TTTACCATAGCAGAGGACGTATCATACAACAAAAG--ATTCAAA-GTTTTTTAA--AT---ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGAGAA-GCATACAATT-TG-----A------ATGGAAATG---CGGAAGAATACACTT
gi|115488 : TTTTATTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGCT---GTTCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAT---GA--ATGGCAGGAACCG--CCATATCTGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAACACA-----TTTACCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTAA--AT---ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACAGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115489 : TTTTATTGGAAGGCGAGCGAAGC-TAT-GACTTCCTTAGCTGTC---GTGCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-A-TTC-AC--AAGTTTCAAAACGCA-----TTTACCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--AA-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACAATACGGTAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115490 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAATACA-----TTTACCGTAGCAGAGGACTTATTATACAACAAAAG--ATTCAAA-G-TTTTTTA--AA-T-ATTG--CGGATAATT-TT-A-----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CTGAAGAATACACTT
gi|115491 : TTTT-TTGGAAGGCGAGTCGAGC-TCT-GACTTCCTTAGCTGTT---GTGCAGCT---CTAG--CA-TCT-GTT-----AT-ACA-C---------TACTAC---GT--ATGGCAGGAACCG--CCATATCCGTCCGACCGATAAA-G-A-A-TTC-AC--AAGTTTCAAAATGCA-----TTTACAGTAGCAAAGGACGTATTACACAACAAAAG--ATTCAAA-GTTTTTTAA--A----ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGATGAATACACT
gi|115492 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAACTGTC---GTGCAGCT---CCAG--CAATCT-GTT-----AT-ACA-A----------ACTAT---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AT--AACTTTCAACACGCA-----TTTACCTTAGCAGAGGACGTATTATACAACAAGAA--TTTCAAA-G-TTTTTTA--TT-T-ATTG--CGGATGTTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATA-GGGAA-GCATGCAATT-TG-----C------ATGGAAATG---CGGAAGACTACACTTaat
gi|115493 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGCTGCC---CCAG--CAATCT-GTT-----AT-ACA-A----------ACTAC---AT--ATGGCAGGAACCG--CCATATTTATCTGACCAATAAA-GTA-G-TTC-AC--AACTTTCAACACGCA-----TTTACTGTAGCAGAGGACGTATTATACAACAAAAG--TTACACA--TTTTTTTA--TT-T-ATTG--CGGATGTTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATATGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACat
gi|115494 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGTAGCC---CTAG--CAATCT-GTT-----AT-AAA-GG--------TA--AC---GT--ATGGCAGGAATTG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGAAGTGGACGTATTATATAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CAGATTTTT-TT-CT----GT-----------A---------TA-AA-----AA--------T--------CCAAAG-------ATACGATACGTGAA-GCATACAATT-TC-----C------ATTTAAATG---TGGAAGAATACACTT
gi|115495 : TTTT-TTGGAAGGCGAGCAAAGC-TCC-GACTTCCTTAGCTGTC---GTGTTGCC---TTAG--CAATCT-GTT-----ATTAAG-G---------TA--AC---GT--ATGGTAGGAACCG--CCATATTCATCCGACTGATAA--GTA-G-TTC-AA--AAGTTTCAAAACGCA-----TTTGCCGTAGAAGAGGACGTTTTATACAGCAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTT--TGGATTTTT-TT-CT----GT-----------A---------TA-GA-----AA--------T--------TTATAG-------ATACGATACGTGAA-GCATACACTT-TC-----T------A-ATAAATG---CAGAAGAATACACTat
gi|115496 : TTTT-TTGGAAGGCAAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGCAGCT---CTAG--CAATCT-GTT-----AT-A-A-A---------TGTAAC---TT--TTGGCAGGAACCG--CCATATTCATGCGACTGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----TTTGCCGTAGAAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTT
gi|115497 : TTTT-GTGGAAGGCGAGCATAGC-TCT-GACTTCCATTGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-AAA-GG--------TA--AC---GT--ATGACAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----ATTGCCGTA-CAGAGGACGTATTGCACAACAAAAG--ATT
gi|115498 : TTTT-TTGGAAGGCGCGCAAAGC-TCT-GACTTCATTGTCTG
gi|115499 : TTA-TTGGAAGGCGAGCAAAGC-CCT-GACTTCCTTAGCTTTC---GTGCAGCC---CCAG--CAATCT-GTT-----GT-ACA-A----------ACTAT---GT--ATGGCAGGAACCG--CCATATTCATCCGACAGATAAA-GTA-G-TTC-AC--AACTTTCAACACGCA-----TTTACCATAGCAGAGGACGTATTATACAACAAAAG--TTTCAAA-G-TTTTTTA--TT-T-ATTG--CAGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAGTT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115500 : TTT-TTGGAAGGCGAACGAAGC-TCT-GACTTCCATAGCTGTC---GTGCAGCC---CTAG--CAATAT-GTT-----AT-ACA-AGG-------TA--AC---AT--ATGACGGGAATCG--CCATATCCATCCGACCGATAAAAGTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTTCCGTAGCAGAGGACATATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGACTTTT-TT-CT----GT-----------A---------TA-AA-----TA--------T--------TCAACA-------ATACGATACGGCAA-GCATACAATT-TC-----C------ATGGACATG---CGGAAGAATACACat
gi|115501 : TTT-TTGGAAAGCGAGAGAAGT-T-T-GACGTCCTTAGGTGTC---GTGTAGCC---CTAG--CAATCT-GTT-----AT-AAA-GG--------TA--AC---GT--ATGGCAGGAACCG--CCATATTCATCCGACTGATAAA-GTA-G-TT-----------TCAAAAAGCA-----TTTGCCGTAGAAGAGGACGTATTTTACACCAAAAG--ATTCTAT-TTTTTTTTA--TT-T-ATTG--TAGAT-TTT-TT-CT----GT-----------A----------A-AA-----AA--------T--------TCAAAG-------ATACGATACGTGAA-GCATACAATT-TC-----C------ATTTAAATG---CGGAAGAATATACTT
gi|115502 : TTT-TTGGAAGGTGAGCAAAGC-TCT-GATTTCCTAAGCTGTC---GTGCAGCC---CTAA--CAATCT-GTA-----AT-AAA-GG--------TA--AC---GT--ATGGCAGGAACCG--CTATATTCATCTGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----TTTGCTGACGAAGAGGATGTATTATACAACAAAAT--ATTCAAA-GTTTTTTat
gi|115503 : TTT-TTGGAAGGTGAGCAAAGC-TCT-TACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAGTCT-GTT-----AT-AAAGG---------TA--AC---AT--ATGACAGGAATTG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----
gi|115504 : TTT-TTGGAAGGCCAGCATAGCATAT-GCCTTTTGTAGCTATC---GTGTGG-------AGTACAATTTCGTT-----CT-ATA-ACCTCTGTTATACT-----GT---TGACGACAATT---TCAT-TTCCTCTGACCGATAAA-ATA-GATCC-AA--CAGTTTCAAAAAGCAAAAATTTTGACATAACAGAGTACGTA-----------GAG--ATGAAAATGTTATTTTA--------TTG--CG---ATTT-TTGTT----TT-----------AT--------CA-AAC----AGAAAAACTCT--------TCAAAT-------ATGCGGTA-GTCAATGCATACAATT-TC-----C------AATAAAATG---
gi|115505 : TTA-TTGGAAGGTGAGCATAGC-GAT-GCCTTCTATATAAGTCACAGTGCGACTGATTTA---CAATTTTGTTCAATAAC-ATA-A---------TGTTATACTGTTGATGGC------CATTCCAT-TTCCTTCGACCGATAAA-GTAAG-TCC-AA--AATATTCAAATTGCA-----ACTGCCATAGCAGAGGA-------------AATAGGTATCCAAA------TTTG--TT----TTG--C-GATTTTTGTT-CTA---TT-----------AAACAGCG--CA-AAAC---AC--------T--------TCAAAT-------ATGCGGTA-GTTAATGCATACAATT-TC-----C------ACTAAAATG---
gi|115506 : TT-TTGAACGGTAAGCAAATA-TCTTGACTTCCATAGCTATC---GTGCAGCC---ATAG--CAATCT-GTT-----AT-ACA-A---------GA-TAC---GT--ATGACAGGAACCG--CCATATTCATCCGACTAATAAA-GTA-G-ATA-GC--AAGTTTCAAAACGCA-----TTTGCTGTAGCAGAGGACGTATTATACAACAAAAG--ATTCA----TTTTTTTA--TT-A-ATTG--CGGATTTCT-TT-CT----TT-----------A---------CA-AA-----AA--------A--------TCAAAG-------ATTCGATACGGGGA-GCACACAATT-TC-----C------ATGGAAATG---TGGAAGAATACACT
gi|115507 : T-TTGGAAGGCCAGCAAAGC-TCT-GACTTCCTTAGCTGTT---GTGCTGCC---CTAG--CAATCT-GTT-----AT-ACA-A----------ACTAT---GT--ATGGCAGATCCTG--CCATATTCATTTGCCCGATAAA-GTA-G-TTC-AC--CACTTTCAA--CGCA-----TTTACTGCAGCAGAGGCCGTATTATGCAACAAAAG--TTTCAAA-GTTTT-TTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------C--------TCAAAA-------ATATGATACGGGAA-GCATACAATT-TC-----A------ATAGAAATG---CGGAAGAATACACTTaat
gi|115508 : ACCG--CGATATTCATCCAACCGATAAA-ATA-G-TCC-AC--AAGTGTCAAATCGCA-----TTTGCCATAGCAGAGGCCGTGTTATACAATAAGAA--GTTT----GTCTTTTat
gi|115509 : ACCG--TGACAGTCATTCAACTGATAAA-ATA-G-TTT-GC--AA---------CACA-----TTTTCCATAGCAGAGGACATTTTATAGAATAAAAG--ATTCAAA-GCTTTAT----TT-T-ATTG--CG---ATTT-GT--T----TT-----------GCGAC-----CA-AACAGGGAG------------------CAAAAAACACAGATGCCATACTGAAA-GCATTCAATTATCACTGAT------ATAGAAATG---CAGAAGACTACACa
gi|115510 : G--CGATATTCATCCGCCCGATAAA-ATA-G-TTC-AC--AAGCTTCAAAAAGCA-----
gi|115511 : CAT-TTCCGCCGACCGATAAA-ATA-G-CTC--CGAAAGTTTCAAAATGCA-----ATTGCCATAGCACAGGACGT-----------AGAG--ATCCAA-----TTTCGAT-TT-T-ATTA--C---TAGTT-TT-GTCCGATC-----------AAAGAGAGAGCA-AA-----AACAC-----T--------TCAAAT-------ATGCGGTAGTAAAA-GCATACAATT-TC-----C------AGTAAAATGACATGAAAGAGTACgcactctagtaaagcttcgtatta
gi|115512 : CAT-TTCCTCTGACCAATAAA-ATA-G-TTCCAA--AAGTTCCAAAGCGCA-----ATTGCCATAGCAGAGG-----TTGC------AGAG--ATTTAAA-----TTTGAT-TT-T-ATTG--CA---ATTT-TT-GT----TTTTAAATATCAAA---------CAGAA-----AG--------CAAAACACATCAAAT-------ATGCAGTAGTCAAA-GTATACAATT-TT-----C------AC-TAAATG---
gi|115513 : TTCCTCCGACCGATAAA-ATA-G-TTCCAA--AAGTTTCAAAACGAA-----ATTACCATAGCAGAGGAAGTA-----------GAG--ATCCAAA------TTTACTTT-T-ATTG--CG----TTT-TT-CG----TT-----------
gi|115514 : atTCCGACCGATTAA-ATA-G-TTCCAA--AAGTTTCAAAGCGCG-----ATTACCATAGCAGAGGACGTA-----------GAG--ATCCAAA-----TCTGA--TT-TTATTG--CG---ATTT-TT-GT----TT-----------G---------CG-A
gi|115515 : GTATTATACAATAAGAG--ATTCAAA-GTTTTAATG--TTAT-ATCAAACAGAG---------------T-----------G---------CA-AA-----AAC-------T--------TCAAAG-------ATGCGATACGGAAC-GCGCACAATT-TC-----CACTTATATTGAAATT---TTGAAGACTACACCT
blockSeqs : A A T ACA GAT TA A C CAATA T C ACCTCTGTTATACT ACT TG TT A A A C GA AAAAT GT TGT CTTTT AA G A G G CCGA TTAAATATCAAA G CAGGG AAAAACTCT AACACAG T A ACTGA ACTTAT G ACA
blockSeqs : A . . . . . A T . . C CTACT . . . . . . C . . . GT TTTT . G A . . A AAAGAGAGAG . AC CAAAACACA . T . . . G .
blockSeqs : . . . . . . A . . . C CTACT . . . . . . C . . . GT TTTT . G A . . . AAACAGCG . C CACT . . . . . G .
blockSeqs : . . . . . . A . . . C CTACT . . . . . . . . . . GT TTTT . G A . . . GCGAC . . CT . . . . . G .
blockSeqs : . . . . . . A . . . C CTACT . . . . . . . . . . GT TTAT . G G . . . AT . . T . . . . . G .
blockSeqs : . . . . . . A . . . C ATGTA . . . . . . . . . . GT AAT . G G . . . A . . T . . . . . G .
blockSeqs : . . . . . . A . . . A AGGTA . . . . . . . . . . GT AAT . G T . . . A . . T . . . . . T .
blockSeqs : . . . . . . A . . . A ATGTT . . . . . . . . . . GT TTT . G T . . . A . . T . . . . . A .
blockSeqs : . . . . . . A . . . A AACT . . . . . . . . . . TT TTT . G A . . . A . . T . . . . . G .
blockSeqs : . . . . . . A . . . C AACT . . . . . . . . . . GT TTT . G T . . . A . . T . . . . . G .
blockSeqs : . . . . . . G . . . C GGTA . . . . . . . . . . GT TTT . G A . . . A . . T . . . . . T .
blockSeqs : . . . . . . A . . . A GGTA . . . . . . . . . . GT TTT . G T . . . A . . T . . . . . T .
blockSeqs : . . . . . . A . . . A AACT . . . . . . . . . . GC TTT . G T . . . A . . T . . . . . T .
blockSeqs : . . . . . . A . . . A GGTA . . . . . . . . . . GT TTT . G A . . . A . . T . . . . . G .
blockSeqs : . . . . . . A . . . T GGTA . . . . . . . . . . G TTA . G A . . . A . . T . . . . . A .
blockSeqs : . . . . . . . . . . T GGTA . . . . . . . . . . G TTT . . A . . . A . . T . . . . . A .
blockSeqs : . . . . . . . . . . C AGAT . . . . . . . . . . T TTT . . A . . . A . . A . . . . . T .
blockSeqs : . . . . . . . . . . C AACT . . . . . . . . . . G AT . . A . . . A . . C . . . . . T .
blockSeqs : . . . . . . . . . . . GTA . . . . . . . . . . T TT . . . . . . G . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . A . . . . . . G .
blockSeqs : . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . . . .
blockSeqs : . . . . . .
blockSeqCons : GGCN*********** TTT****
originalCons : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-ACA-N---------TACTAC---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
finalCons : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTC---GTGCAGCC---CTAG--CAATCT-GTT-----AT-ACAGGCN-----------AC---GT--ATGGCAGGAACCG--CCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTATTT----ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
Alignments
lowQualScore : 111111 222222222222222222222 11111111111111111
lowQualScore : 4 2 2 6666666 55555 555 555555 333 1 0 1 1 4 22 33333 22 888 6666666 22 2 3 1 1 5555 111111111111111111111 1 99999 66666666666666666 6666666 4 2 55555 555555 2 333
lowQualScore : . . . ....... ..... ... ...... ... . . . . . .. ..... .. ... ....... .. . . . . .... ..................... . ..... ................. ....... . . ..... ...... . ...
lowQualScore : 0 0 0 8888888 33333 000 777777 777 5 1 5 5 4 00 77777 11 888 6666666 55 5 8 8 8 7777 555555555555555555555 9 88888 22222222222222222 5555555 0 0 00000 888888 4 555
consensus : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTCGTG-------CA-----GCCCTAGCAA--TCTGTTATACA-G-GCNAC---GTATGGCAGGAACCGCCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
Reference ( family-656 ) : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTCGTG-------CA-----GCCCTAGCAA--TCTGTTATACA-G-GCNAC---GTATGGCAGGAACCGCCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115487 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCTTTAGCTGTCGTG-------CA-----GCTCTAGTA---TCTGTTATACA----CTACTTCGTATGGCAGGAACCGCCATATCCGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAACGCA-----TTTACCATAGCAGAGGACGTATCATACAACAAAAG--ATTCAAA-GTTTTTTAA--AT---ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGAGAA-GCATACAATT-TG-----A------ATGGAAATG---CGGAAGAATACACTT
gi|115488 : TTTTATTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGCTGTT-------CA-----GCTCTAGCA---TCTGTTATACA-CTACTAT---GAATGGCAGGAACCGCCATATCTGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAACACA-----TTTACCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTAA--AT---ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACAGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115489 : TTTTATTGGAAGGCGAGCGAAGC-TAT-GACTTCCTTAGCTGTCGTG-------CA-----GCTCTAGCA---TCTGTTATACA-CTACTAC---GTATGGCAGGAACCGCCATATCCGTCCGACCGATAAA-G-A-A-TTC-AC--AAGTTTCAAAACGCA-----TTTACCGTAGCAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--AA-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACAATACGGTAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115490 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTCGTG-------CA-----GCTCTAGC-A--TCTGTTATACACT-ACTAC---GTATGGCAGGAACCGCCATATCCGTCCGACCGATAAA-G-A-G-TTC-AC--AAGTTTCAAAATACA-----TTTACCGTAGCAGAGGACTTATTATACAACAAAAG--ATTCAAA-G-TTTTTTA--AA-T-ATTG--CGGATAATT-TT-A-----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CTGAAGAATACACTT
gi|115491 : TTTT-TTGGAAGGCGAGTCGAGC-TCT-GACTTCCTTAGCTGTTGTG-------CA-----GCTCTAGCA---TCTGTTATACA-CTACTAC---GTATGGCAGGAACCGCCATATCCGTCCGACCGATAAA-G-A-A-TTC-AC--AAGTTTCAAAATGCA-----TTTACAGTAGCAAAGGACGTATTACACAACAAAAG--ATTCAAA-GTTTTTTAA--A----ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGATGAATACACT
gi|115492 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAACTGTCGTG-------CA-----GCTCCAGCAA--TCTGTTATACA-A-ACTAT---GTATGGCAGGAACCGCCATATTCATCCGACCGATAAA-GTA-G-TTC-AT--AACTTTCAACACGCA-----TTTACCTTAGCAGAGGACGTATTATACAACAAGAA--TTTCAAA-G-TTTTTTA--TT-T-ATTG--CGGATGTTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATA-GGGAA-GCATGCAATT-TG-----C------ATGGAAATG---CGGAAGACTACACTTaat
gi|115493 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTTGTG-------CT-----GCCCCAGCAA--TCTGTTATACA-A-ACTAC---ATATGGCAGGAACCGCCATATTTATCTGACCAATAAA-GTA-G-TTC-AC--AACTTTCAACACGCA-----TTTACTGTAGCAGAGGACGTATTATACAACAAAAG--TTACACA--TTTTTTTA--TT-T-ATTG--CGGATGTTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATATGATACGGGAA-GCATACAATT-TG-----C------ATGGAAATG---CGGAAGAATACat
gi|115494 : TTTT-TTGGAAGGCGAGCAAAGC-TCT-GACTTCCTTAGCTGTTGTG-------TA-----GCCCTAGCAA--TCTGTTATAAA-G-GTAAC---GTATGGCAGGAATTGCCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTGCCGTAGAAGTGGACGTATTATATAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CAGATTTTT-TT-CT----GT-----------A---------TA-AA-----AA--------T--------CCAAAG-------ATACGATACGTGAA-GCATACAATT-TC-----C------ATTTAAATG---TGGAAGAATACACTT
gi|115495 : TTTT-TTGGAAGGCGAGCAAAGC-TCC-GACTTCCTTAGCTGTCGTG-------TT-----GCCTTAGCAA--TCTGTTATTAA-G-GTAAC---GTATGGTAGGAACCGCCATATTCATCCGACTGATAA--GTA-G-TTC-AA--AAGTTTCAAAACGCA-----TTTGCCGTAGAAGAGGACGTTTTATACAGCAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTT--TGGATTTTT-TT-CT----GT-----------A---------TA-GA-----AA--------T--------TTATAG-------ATACGATACGTGAA-GCATACACTT-TC-----T------A-ATAAATG---CAGAAGAATACACTat
gi|115496 : TTTT-TTGGAAGGCAAGCAAAGC-TCT-GACTTCCTTAGCTGTTGTG-------CA-----GCTCTAGCAA--TCTGTTATAAA-T-GTAAC---TTTTGGCAGGAACCGCCATATTCATGCGACTGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----TTTGCCGTAGAAGAGGACGTATTATACAACAAAAG--ATTCAAA-GTT
gi|115497 : TTTT-GTGGAAGGCGAGCATAGC-TCT-GACTTCCATTGCTGTCGTG-------CA-----GCCCTAGCAA--TCTGTTATAAA-G-GTAAC---GTATGACAGGAACCGCCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----ATTGCCGTA-CAGAGGACGTATTGCACAACAAAAG--ATT
gi|115498 : TTTT-TTGGAAGGCGCGCAAAGC-TCT-GACTTCATTGTCTG
gi|115499 : TTA-TTGGAAGGCGAGCAAAGC-CCT-GACTTCCTTAGCTTTCGTG-------CA-----GCCCCAGCAA--TCTGTTGTACA-A-ACTAT---GTATGGCAGGAACCGCCATATTCATCCGACAGATAAA-GTA-G-TTC-AC--AACTTTCAACACGCA-----TTTACCATAGCAGAGGACGTATTATACAACAAAAG--TTTCAAA-G-TTTTTTA--TT-T-ATTG--CAGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------T--------TCAAAA-------ATACGATACGGGAA-GCATACAGTT-TC-----C------ATGGAAATG---CGGAAGAATACACTT
gi|115500 : TTT-TTGGAAGGCGAACGAAGC-TCT-GACTTCCATAGCTGTCGTG-------CA-----GCCCTAGCAA--TATGTTATACAAG-GTAAC---ATATGACGGGAATCGCCATATCCATCCGACCGATAAAAGTA-G-TTC-AC--AAGTTTCAAAACGCA-----TTTTCCGTAGCAGAGGACATATTATACAACAAAAG--ATTCAAA-GTTTTTTTA--TT-T-ATTG--CGGACTTTT-TT-CT----GT-----------A---------TA-AA-----TA--------T--------TCAACA-------ATACGATACGGCAA-GCATACAATT-TC-----C------ATGGACATG---CGGAAGAATACACat
gi|115501 : TTT-TTGGAAAGCGAGAGAAGT-T-T-GACGTCCTTAGGTGTCGTG-------TA-----GCCCTAGCAA--TCTGTTATAAA-G-GTAAC---GTATGGCAGGAACCGCCATATTCATCCGACTGATAAA-GT-------------AGTTTCAAAAAGCA-----TTTGCCGTAGAAGAGGACGTATTTTACACCAAAAG--ATTCTAT-TTTTTTTTA--TT-T-ATTG--TAGAT-TTT-TT-CT----GT-----------A----------A-AA-----AA--------T--------TCAAAG-------ATACGATACGTGAA-GCATACAATT-TC-----C------ATTTAAATG---CGGAAGAATATACTT
gi|115502 : TTT-TTGGAAGGTGAGCAAAGC-TCT-GATTTCCTAAGCTGTCGTG-------CA-----GCCCTAACAA--TCTGTAATAAA-G-GTAAC---GTATGGCAGGAACCGCTATATTCATCTGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----TTTGCTGACGAAGAGGATGTATTATACAACAAAAT--ATTCAAA-GTTTTTTat
gi|115503 : TTT-TTGGAAGGTGAGCAAAGC-TCT-TACTTCCTTAGCTGTCGTG-------CA-----GCCCTAGCAG--TCTGTTATAAA-G-GTAAC---ATATGACAGGAATTGCCATATTCATCCGACCGATAAA-GTA-G-TTC-AC--AAGTTTCAAAATGCA-----
gi|115504 : TTT-TTGGAAGGCCAGCATAGCATAT-GCCTTTTGTAGCTATCGTGTGGAGTACAATTTCGTTCTA-TAACCTCTGTTATAC--------T---GT-TGACGACAATT-TCAT-TTCCTCTGACCGATAAA-ATA-GATCC-AA--CAGTTTCAAAAAGCAAAAATTTTGACATAACAGAGTACGTA-----------GAG--ATGAAAATGTTATTTTA--------TTG--CG---ATTT-TTGTT----TT-----------AT--------CA-AAC----AGAAAAACTCT--------TCAAAT-------ATGCGGTA-GTCAATGCATACAATT-TC-----C------AATAAAATG---
gi|115505 : CCAT-TTCCTTCGACCGATAAA-GTAAG-TCC-AA--AATATTCAAATTGCA-----ACTGCCATAGCAGAGGA-------------AATAGGTATCCAAA------TTTG--TT----TTG--C-GATTTTTGTT-CTA---TT-----------AAACAGCG--CA-AAAC---AC--------T--------TCAAAT-------ATGCGGTA-GTTAATGCATACAATT-TC-----C------ACTAAAATG---
gi|115506 : ttattggaaggtgagcatagcgatgccttctatataagtcacagtgcgactgatttacaattttgttcaataacataatgttatactgttgatggccattTT-TTGAACGGTAAGCAAATA-TCTTGACTTCCATAGCTATCGTG-------CA-----GCCATAGCAA--TCTGTTATACA-A-GATAC---GTATGACAGGAACCGCCATATTCATCCGACTAATAAA-GTA-G-ATA-GC--AAGTTTCAAAACGCA-----TTTGCTGTAGCAGAGGACGTATTATACAACAAAAG--ATTCA----TTTTTTTA--TT-A-ATTG--CGGATTTCT-TT-CT----TT-----------A---------CA-AA-----AA--------A--------TCAAAG-------ATTCGATACGGGGA-GCACACAATT-TC-----C------ATGGAAATG---TGGAAGAATACACT
gi|115507 : T-TTGGAAGGCCAGCAAAGC-TCT-GACTTCCTTAGCTGTTGTG-------CT-----GCCCTAGCAA--TCTGTTATACA-A-ACTAT---GTATGGCAGATCCTGCCATATTCATTTGCCCGATAAA-GTA-G-TTC-AC--CACTTTC--AACGCA-----TTTACTGCAGCAGAGGCCGTATTATGCAACAAAAG--TTTCAAA-G-TTTTTTA--TT-T-ATTG--CGGATATTT-TT-CT----TT-----------A---------CA-AA-----AG--------C--------TCAAAA-------ATATGATACGGGAA-GCATACAATT-TC-----A------ATAGAAATG---CGGAAGAATACACTTaat
gi|115508 : ACCGCGATATTCATCCAACCGATAAA-ATA-G-TCC-AC--AAGTGTCAAATCGCA-----TTTGCCATAGCAGAGGCCGTGTTATACAATAAGAA--GTTT----GTCTTTTat
gi|115509 : ACCGTGACAGTCATTCAACTGATAAA-ATA-G-TTT-GC--AA---------CACA-----TTTTCCATAGCAGAGGACATTTTATAGAATAAAAG--ATTCAAA-GCTTTAT----TT-T-ATTG--CG---ATTT-GT--T----TT-----------GCGAC-----CA-AACAGGGAG------------------CAAAAAACACAGATGCCATACTGAAA-GCATTCAATTATCACTGAT------ATAGAAATG---CAGAAGACTACACa
gi|115510 : GCGATATTCATCCGCCCGATAAA-ATA-G-TTC-AC--AAGCTTCAAAAAGCA-----
gi|115511 : CAT-TTCCGCCGACCGATAAA-ATA-G-CTC--CGAAAGTTTCAAAATGCA-----ATTGCCATAGCACAGGACGT-----------AGAG--ATCCAA-----TTTCGAT-TT-T-ATTA--C---TAGTT-TT-GTCCGATC-----------AAAGAGAGAGCA-AA-----AACAC-----T--------TCAAAT-------ATGCGGTAGTAAAA-GCATACAATT-TC-----C------AGTAAAATGACATGAAAGAGTACgcactctagtaaagcttcgtatta
gi|115512 : CAT-TTCCTCTGACCAATAAA-ATA-G-TTCCAA--AAGTTCCAAAGCGCA-----ATTGCCATAGCAGAGG-----TTGC------AGAG--ATTTAAA-----TTTGAT-TT-T-ATTG--CA---ATTT-TT-GT----TTTTAAATATCAAA---------CAGAA-----AG--------CAAAACACATCAAAT-------ATGCAGTAGTCAAA-GTATACAATT-TT-----C------AC-TAAATG---
gi|115513 : TTCCTCCGACCGATAAA-ATA-G-TTCCAA--AAGTTTCAAAACGAA-----ATTACCATAGCAGAGGAAGTA-----------GAG--ATCCAAA------TTTACTTT-T-ATTG--CG----TTT-TT-CG----TT-----------
gi|115514 : atTCCGACCGATTAA-ATA-G-TTCCAA--AAGTTTCAAAGCGCG-----ATTACCATAGCAGAGGACGTA-----------GAG--ATCCAAA-----TCTGA--TT-TTATTG--CG---ATTT-TT-GT----TT-----------G---------CG-A
gi|115515 : GTATTATACAATAAGAG--ATTCAAA-GTTTTAATG--TTAT-ATCAAACAGAG---------------T-----------G---------CA-AA-----AAC-------T--------TCAAAG-------ATGCGATACGGAAC-GCGCACAATT-TC-----CACTTATATTGAAATT---TTGAAGACTACACCT