lowQualScore : 3333333 1 1 66666666666666666666666 1111 1111111 11 11 11 2222 11111111 222222222 222 1 111 1111
lowQualScore : 999999 3 555 555 555 7777777 6 3 4 8 44444444444444444444444 1 1 55 444 222 1 11 2 88888 3 8 1 5 0 0000 1 1 1 66 9999999 7 11 0 5 4 22 2 55 11 1 8 1 11 22 11 9999 1 4 11 66666666 3 222 222 8 222 333333333 33 444444 666 000 6666 1 1 1 1 2 3 666 11 2222 2222 444 1 11 999999 6 1 1 999 2 33333 3
lowQualScore : ...... . ... ... ... ....... . . . . ....................... . . .. ... ... . .. . ..... . . . . . .... . . . .. ....... . .. . . . .. . .. .. . . . .. .. .. .... . . .. ........ . ... ... . ... ......... .. ...... ... ... .... . . . . . . ... .. .... .... ... . .. ...... . . . ... . ..... .
lowQualScore : 666666 3 888 888 888 7777777 0 2 6 8 99999999999999999999999 8 4 99 222 777 5 66 8 55555 5 3 4 5 6 5555 4 4 4 77 3333333 9 99 2 2 3 00 9 77 55 4 6 4 88 88 99 1111 4 4 99 00000000 1 777 777 9 555 222222222 44 111111 999 444 2222 4 2 4 3 7 2 999 99 1111 9999 888 4 99 777777 8 4 4 444 9 66666 5
consensus : TATTGATATT------TAAA-TGATTTGTT---TC---A---T---AATACCTAAACTTTAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTAAAATCGCATTCAAAATCGATNAATAA--TATTGACAAAATGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TTTT-C--GAAACCTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-TGA-ANNCCTCGN-A-AAAACTCATTTGATAT--AATACATTTTCAATCGGTC-ATA--T-T-TTC-A-A-G-TTA--CC--AAT--A----T-AANT--T---TTATTAGA-A---A---AGA---AA---------TC--AT------CCAAAAT--TTACT-CATTTCCGAG---CAATGTATAT-TTTTCGGCG-TCAAATG-GTTCTTTTC-AAAACCTTAATTCNC-GAAAGATA--T---NAA----A---AAT-ACCAATATGAATT--CCT----C-ACAATAAC-CA-TTTGGTATACTATATTTTCAATCGNCGATAC-TTTTAAAGTTATCTTAA-----TAAGCTTAATTTGA-CAAA
Reference ( gi|110898 ) : TATTGATATT------TAAA-TGATTTGTT---TC---A---T---A---CCTAAACTTCAAATTGGTAAAGGTTAGAAGGAATATTTCGTCCATTAAAAAGTTTAAAATCGCATT-AAAATCGATAAATAAAGTATAAACAAAATGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TTTT-T--GAAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGA-AAACCTTGA-A-AAAACTCATTTGATAT--AATACATTTTCAATCGATC-ATA--T-T-CTC-A-A-G-TTA--CC--AAT--A----T-AATT--T---TTACCAGA-A---A---ACA---AA---------TC--AT------CCAAAAC--TTACA-AATTTCCGAG---CAATGTATAT-TTTTCGGCG-TCAAATG-GTTCTTTTC-AAAACATTAATTCTA-GAAAGATA--T---AAA----A---AAT-ACCAATATGAATT--CTT----T-ACAATAGC-CA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAA-----TAAGCTTAATTTGA-CAAA
gi|110899 : TATTGATATT------TAAA-TGATTTGTT---TT---A---T---AATACCTAAACTTTAAATTGATAAAGGTTAGAAGAAATAGTTCGTCCTTTAAAATGTTTAAAATAGCATTTAAAATCGATAAATA-----TTGACAAAATGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TCTT-T--GAAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGA-AAACC-TGG-A-AAAACTCATTCAATAT--AATACATTTTCAATCGATC-ATA--T-T-CTCAA-A-G-TTA--CC--AAT--A----T-AAGT--T---TTACCAAA-A---A---GGA---AA---------TC--GT------CCAAAAT--TTAAT-AATTTCCGAG---CAAAGTATAT-CTTTCGGCG-TCATATG-GTTCTTTTC-AAAACCTTAATTCTT-GAAAGTTA--T----CA----A---AAT-ACCAATATGAATT--CTT----T-GCAATAAC-AA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAA-----TAAGCTTAATTTGA-CAAA
gi|110900 : TAGTGATATT------TAAA-CGATTTGTTAGTTA---A---T---A---CCAAAACTTCAAATTGATAAAGGTAAGAAGAAATATTTCGTCTAATAAAATGTTTAAAATCGCATTTAAAATCGATCAAT----TTTGA-CAAATTGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TTT-----GAAACATTAGTTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-TGA-AAATCT--A-G-AAAACTCATTTGATAT--AAAACATTTTCAATCGATC-ATA--T-T-CTC-A-AAG-TTA--CC--AAT--A----T-AATT--T---TCACCAGA-A---A---AGA---AA---------TT--AT------CCGAAAT--TTACT-AATTTCCGAG---CAATATATAT-TTTTCGGCG-TCAAATG-GTTCTTTTC-AAAACCTTGATTCTA-GAAAGATA--T---CAA----A---AAT-ACCAATATGAATC--CTT----T-ACAATTAC-CA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAA-----TAAGCTTAATTTGA-CAAA
gi|110901 : TATTGATATTGTAAATTGAA-TGATTTGTT---TC---A---T---AATATCTAAACTTTAAATTAGTTAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTAAAATCACATT-CAAAC---TAGATCAA-TATTGACAAAATGTG-CGGTTTT-ATCC---T---CA-A-TGCGTTC-TTTT-TT-GAAACTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-AATAA-AAAC--TGA-C-AAAACTCATTTGATAT--AATACATTTTCAATCGGTC-ATA--T-T-GTC-A-AAG-TTA--CC--AAT--ACAT-T-AAGT--T---TTATTAGA-A---A---AGA---AA---------TC--AT------CCACAAT--TTACT-CATTTTCGAG---GAATGTATAT-TTTCTCGCA-TCCAATG-GTTCTTTTC-AACACCTTAATTCAC-GAAAGATA--T---AAA----A---AAT-ACCAATATGAATT--CTT----C-ACAATAAC-CA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGA-----TAAGTTTTAATTGA-TAAA
gi|110902 : TATTGATCTT------TAAA-TGATTTGTT---TCATAA---T---A---TCTAAACTTTAAATTGGTAAAGGTTACAAGATATAGTTCGCCCAATAAAATGTTTAAAATCACATTCAAAATCG---AACAA--TATTGACAAAATGTG-TGGTTTT-ATAC---T---CA-A-TGCGTTCTTTTT-T--TAAACCTTAATTCTCGAAAAATACTCAAG-AA-AGA----AAC-A-AGA-AATCC-TGA-C-AAAACTCACTTGATAA--AATACATTTTCAATCGGTC-ATA--T-T-GTCAA-A-G-TTA--CC--AAT--AAAT-T-AAGT--T---TTATTAGA-A---A---AGA---AA---------TC--AT------CCACAAT--TTACT-AATTTTCAAG---CAATGTATAT-TTTTCG--G-TCAAATG-GGTCTTTT--AAAACCTTAATTCAC-GTAAGATA--T---CAA----A---GAT-ACCAATATGAATT--CTT----C-ACAGTTAC-CA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAA-----TTAGCTTAAATTGATCAAA
gi|110906 : TATTGATATT------TAAA-AGATTTGTT---TC---A---T---AATACCTAAACATCAAATTGGTAAAGGTTAAAGGAAATATTTCGTTCA--------------GTCGCATTCAAAATCGATAA-----GTATTTACAAAATGAG-CGGTTTT-ATTC---T---CA-G-TATGTTC-TTTT-TT-GAAACCTTAATTCTCGAAAGTTTCTCAAG-AA-AGA----AAC-A-AGA-ACACCTAG--C-AAAACTCATTTGATAT--AATACATTTTCAATCGGCC-ATA--T-T-TTCAA-A-G-TTA--TC--AAT--A----T-AAGT--T---TTATAAGA-A---A---AGA---AA---------CC--AT------CCAAAAT--TTACT-CATTTCCGAG---CAACGTATAT-TTTTCGCCG-TCAAATG-GTTCATTTC-AAAATCTTAATTCAC-GAAAGATA--T---CAA----A---TAT-ACCAATATGAATT--CCT----C-ACAATAAC-CA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAA-----TAAGCTTAGTTTGA-TAAA
gi|110903 : TATTGATATT------TTAA-TGATTTGTT---TC---A---T---AAAACCTAAACTTTAAATACATAAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTAAAAATCACATT-AAAA--AATCAATCAA-TATTGACAAAATGTG-CGGTTTT-ATCC---T---CA-A-TGCGTTC-TTTT-TT-GATATTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-AGA-AAACCT-GA-C-AAAACTGATTTGATAT--AATACATTTTCAATCG-TC-ATA--T-T-TTC-A-AAG-TTA--CC--AATTTA----TTAAGT--T---TTATAAGA-A---A---AGT---AA---------TC--AT------CCACAAT--TTAAT-AATTTCCTCA---CAATGTATAT-TTTTCGGCG-TCAAATT-GTTTTTTTC-AAAACCTTTATTCAC-GAAAGATA--T---AAA----A---AAT-ACCAATATGAATT--TCT----C-ACAATAAC-CA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCA-----TAAGCTTAGATTGA-
gi|110905 : TATTGATATT------TAAA-AGATTTGTT---TC---A---T---A------ATACTTCAAACTGGTAAAGGTTAGAAGAAATCTTTCGTCCAATAAAA-TTTTAAAATCGCATTCAAAATCGATCA-----GTATTTACAATATGAG-CGGTTTT-ATTC---T---CA-G-TATGTTC-TTTT-TTTAAAACCTTAATTCTCGAAAGTTACTCAAG-AA-AGA----AAC-A-AGA-AAATC-TGG-C-AAAACTCATTTAATAT--AATACTTTTTCAATCGGTC-ATT--T-T-GTCAA-A-A-TTA--TC--AAT--A----T-AAGT--T---TTATTAGA-A---A---AGA---AA---------TC--AT------CCACAAT--TTACT-CATTTCCGAG---CAATAAATAT-CTTTCGCCG-TCAAATG-GTTCATTTC-AAAATCTTAATTCAT-GAAAGATA--T---CAA----A---AAT-ACCAATATGAATT--CCT----C-ACAATAAC-CA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAA-----TAAGCTAAGTTGGA-TAAA
gi|110904 : TATTGATATT------CAAA-TGATTCATT---TC---A---T---AATACCTAAACTTTCAATTGGTAAAGGTTAAAAGAAATATTTCGTCCAATTAAATGTTAAAAATCACATTCAAAGTCGATCAATA-----TTGACAAAATGTG-CGGTTTT-ATCC---T---CA-A-TGAGTTT-TGTT-C--AAAACCTTAATTCTCGAAAGATACTCAAG-AA-AGA----CAC-A-AAACAAAC--TGG-C-AAAATTCATTTGATAT--AATACATTTTCAATCAGTC-GTG--T-T-GTT-A-AAG-TTA--CC--AAT--A----T-AAGT--T---TTATTAGA-A---A---AGA---AA---------GC--AT------CCAAAAT--TTACT-CTTTTCCGAG---CAATGTATAT-TTTTCGGCC-TCAAATG-GTTCTTTTC-AAAATCTTAATTCAC-GAAAGATA--T---CAA----A---AAT-ACCAACATGAATT--CCTCAAAT-ACAAT----CA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAA-----TAAGCTTAAATTGA-TAAA
gi|110907 : TATTGATATT------TAAAATACTTTTTT---TC---A---TTATA---CCTAAACTTCAACTTGGTAAAGGCTAAAAGAAATATTTCGTCCAATAAAATATTTAAAGTCGCATTCAAAATCGATCA-----GTATTTACAAAATGAG-CGGTTTT-TTCG---T---CA-A-GATGTTC-TTTTAT--GAAACCTTATTTCTCGAAAGTTGCTCAGG-AA-AAA----AAA-A--GA-AAACCT-GG-C-AAAACTCATCTGATAT--AATACATTT-CAATCGGTC-ATA--T-T-GTC-A-AAG-TTA--TC--AAT--A----T-AAGT--T---TTATTAGA-A---A---AGA---AA---------TC--AT------CCAACAT--CTACT-CATTACCAAG---CAATGTATAT-TTTTCGACG-TCAAATG-ATTCATTTC-AAAACCTTAATTCAC-GAAAGATA--T---AAA----A---AAT-ACCAATATGAATT--GTT----C-ACTATAAC-CA-TTTGGT-------------AATCGACGATAC--TTTAAAGTTATTTTAA-----TAAGCTTATTTTGA-TAAA
gi|110908 : TATTGATATT------AAAA-TGATTTGTT---TC---AGTAT---A---TCTAAACTTTGAATTACTAAAGGTAAGAAGAAATAATTTGTCCAATTAAATGTTTAAAATCG---------------AACAA--TATTGACAAAATGTG-CGGTTTT-ATAC---T---CA-A-CGCGTTCCTTTT-T--TAAACCTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-AGA-AAAACT--G-A-AAAACTCATTTAATAT--AATACATTTGTAATCGGTC-ATA--TAG-CAC-A-A---TTA--CT--TAT--AAAT-T-AAGT--T---TTATTAGA-A---A---AGA---AA---------TC--AT------CCACAAT--TT-CGTCATTTCCGAG---CATTGTATTTGTTTTCGGCA-TCAAATG-GTTCTTTTC-AAAACCTTAATT-TACGAAAGATA--T---AAA----AAAAAAT-ACCAATATGAACT--CTT----C-ACAATAAC-CA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAA-----TCAGCTTAAATTGA-TAAA
gi|110909 : TATTGATATT------TAAA-TGATTTATT---TC---A---TTATA---TCTAAACTTTGAATTACTAA-GGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTAAAATCG---------------AACAA--TATTGACAAAATGTG-CGGTTTT-ATAC---T---CA-A-TGCGTTC-CTTT-T--TTAATTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-AGA-AAAAC-TGA-C-GAAACTCATTTGATAT--AATACATTTGCAATCGGTC-GTA----T-AGC-ACA-G-TTA--CC--AAT--AAAT-T-GAGT--T---TTATTAGA-A---A---AGA---AA---------TC--AT------CCACAAT--TTACT-CATTTCCGAG---CAATG--CAT-TTGTCTGCGATCGTCTG-GTT
gi|110910 : T------TAGG-TGGTTTGTT---TC---A---T---AATACCTAAACTTCAAATTGGTAAAGGTAAAAAGAAATATTTCGTCCATTAAAATGTTAAAAATCGCATTTAAAATCGTTAAATA-----TTGACAAAATGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TCAT-T--GAAACCTTAATTCTTGGAAGATACTCAAG-AA-AGA----AAC-A-TGA-AACCC---A-ACAAAACTCATTTGATAT--AATACATTTTCAATCGATC-ATA--T-T-CTC-A-AAG-TTA--CC--AAT--A----T-AATT--T---TTACCAGA-A---A---AGA---AA---------TC--AT------CCAAAAT--TTACT-AATATCCGAG---CAATGTATAT-TTTTCGGCG-TCAAATG-GTTCTTTTC-AAAACCTTAATTCTA-GAAAGATA--T---CAA----A---AAT-ACCAATATG-ATT--CTT----T-ACACAAAC-CA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAA-----TAAGCTTAATTTGA-CAAA
gi|110922 : AAAATCGCATTTAAAATCGTTAAATA-----TTGACAAAATGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TCAT-T--GAAACCTTAATTCTTGGAAGATACTCAAG-AA-AGA----AAC-A-TGA-AACCC--AA-C-AAAACTCATTTGATAT--AATACATTTTCAATCGATC-ATA--T-T-CTCAA-A-G-TTA--CC--AAT--A----T-AATT--T---
gi|110914 : aAAATCGT-CC-AAAAT---TTAATAATTTCCGAGCAAAGTATATC--TTTC-GGCG---T---CATA-TGG-TTC-TTTT-C--AAAACCTTAATTCTTGAAAGTTA-TCAAA-AT-ACC----AAT-A-TGA-ATTCTTTGC-A-ATAAC-AATTTGGTTT--ACTATATTTTCAATC-ACCGATAC-T-T-TTA-A-A-G-TTA--TCTTAAT--AAGCTT-AATT--T----------------G---ACA---AATCT------TC--CT------CCAAAAT--GTATC-CATTTCCGAA----AATAAACAT-TT
gi|110916 : CACAATGTA-TATTTTTCGGCG---T---CA-A-ATTGTTT-TTTT-C--AAAACCTTTATTCACGAAAGATA--TAAA-AA-ATACC--AAT-A-TGA-ATTTCTCAC-A-ATAAC-CATTTAGTAC----TATATTTTCAATCG-TCGATAC-T-T-TTA-A-A-G-TTA--TC--
gi|110912 : AATGTA-TATTTTTCGGCG---T---CA-A-ATGGTTC-TTTT-C--AAAACATTAATTCTAGAAAGATA--TAAA-AA-ATACC--AAT-A-TGA-ATTCTTTAC-A-ATAGC-CATTTGGTAT--ACTATATTTTCAATCACTG-ATAC-T-T-TTA-A-A-G-TTA--TCTTAAT--AAGCTT-AATT--T----------------G---ACA---AATGT------TC--CT------CCAAAAT--GAATC-CATTTCCGAA----AATAAACAT-TTttcataagctt
gi|110913 : ccaatataatttttaccagaaaacaaatcatccaaaacttacaaatttccgagcAATGTA-TATTTTTCGGCG---T---CA-A-ATGGTTC-TTTT-C--AAAACCTTAATTCTAGAAAGATA-TCAAA-AATACC----AAT-A-TG---ATTCTTTACA-CAAAC-CATTTGGTAT--ACTATATTTTCAATC-ACCGATA--C-T-TTA-A-A-ATTTA--TCTAAAT--AAGCTT-AATT--T----------------G---ACA---AATGT------TC--CT------CCAAAAT--GTATC-CATTTCCGAA----AATAAACA---TTTCGTCG--CATTTG-TTTCTTCGC--ATGCACC-GTTC-A-GAAAGATC--T---AGACCCTA---AATAAACAATGTTCATTACCTT----TCAGAATTGC-AAGTTTAATATATCAT
gi|110923 : ccaatataatttttaccagaaaagaaatcatccaaaatttactaatatccgagcAATGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TTTT-T--GAAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGA-AAACCTTGA-A-AAAACTCATTTGATAT--AATACATTTTCAATCGATC-ATA--T-T-CTC-A-A-G-TTA--CC--AAT--A----T-AATT--T---
gi|110924 : AATGTG-CGGTTTT-ATCG---T---CA-A-TGGGTTC-TCTT-T--GAAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGA-AAACC-TGG-A-AAAACTCATTCAATAT--AATACATTTTCAATCGATC-ATA--T-T-CTCAA-A-G-TTA--CC--AAT--A----T-AAGT--T---T
gi|110915 : AATGTA-TA-TTTT--TCGG--T---CA-AATGGGTC---TTT-T--AAAACCTTAATTCACGTAAGATATCAAAG-AT-ACC----AAT-A-TGA-ATTCTTCAC-A-GTTAC-CATTTGGTAT--ACTATATTTTCAATCGCCG-ATA--C-TGTTA-A-A-G-TTA--TC----T-------T-AATTAGC---TTA----A-ATTGA---TCA---AATTTTAATGTTC--CT------CCAAAAT--GTATA-CATTTCCGAA----AATTAACAT-TT
gi|110917 : aaatcatccacaatttactaattttcaagcAATGTA-TA-TTTT-CTCG---CATCCA-A-TGG-TTC-TTTT-C--AACACCTTAATTCACGAAAGATA--TAAA-AA-ATACC--AAT-A-TGA-ATTCTTCAC-A-ATAAC-CATTTGGTAT--ACAATATTTTCACTCGCCA-ATAC-T-T-TTA-A-A-G-TAA--TC--TTG--A----T-AAGT--T---TTAATTGATA---A---AAA---AA---------TTA-ATGTTCCACCAAAAT--GTATC-CATTTCCAA
gi|110918 : AATGTA-TA-TTTT--TCGGCCT---CA-A-ATGGTTC-TTTT-C--AAAATCTTAATTCACGAAAGATA-TCAAA-AATACC----AAC-A-TGA-ATTCCTCAA-A-TACAATCATTTGGTATTCAATA--TTTTCAATCGACG-ATA--CGT-TTA-A-A-G-TTA--TCCTAAT--A------AGCT--T----------A-A---ATTGATA---AAGGT------TC--CT------CCAAAAT--TT
gi|110911 : TTTC-GCCG---T---CA-A-ATGGTTC-ATTT-C--AAAATCTTAATTCATGAAAGATA-TCAAA-AATACC----AAT-A-TGA-ATTCCTCAC-A-ATAAC-CATTTGGTAT--ACTATATTCTCAATCGGCG-ACAC-T-T-TTA-A-A-G-TTA--TCTTAAT--AAGC-T-AAGT--T--------GGATA---A---AT----GA---------TC--CT------CCAAAA
gi|110919 : ttagaaaagaaatcatccacaatttactcatttccgagcaataaatatcTTTC-GCCG---T---CA-A-ATGGTTC-ATTT-C--AAAATCTTAATTCACGAAAGATA-TCAAATAT-ACC----AAT-A-TGA-ATTCCTCAC-A-ATAAC-CATTTGGTAT--ATTATATTTTCAATCGGCG-ATACTT-T-TTT-A-A-G-TTATTTT--AAT--AAGCTT-AGTT--T----------------G---ATA---AATGT------TC--CT------CCAAAAC--GGATC-CATTTCCGAAAATCAACATATgggatccatttccggaaatcaacatat
gi|110920 : CG---T---CA-A-ATGGTTC-TTTT-C--AAAACCTTGATTCTAGAAAGATA-TCAAA-AATACC----AAT-A-TGA-ATCCTTTAC-A-ATTAC-CATTTGGTAT--ACTATATTTTCAATCGCCG-ATAC-T-T-TTA-A-A-A-TTA--ACTTAAT--AAGCTT-AATT--T----------------G---ACA---AATGT------TC--CT------CCAAAAT--GTAAC-AATTTCCGAA----AATAAACAT-TT
gi|110921 : CA---T---CA-A-ATGGTTC-TTTT-C--AAAACCTTAATTTACGAAAGATA-TAAAA-AA-AAATACCAAT-A-TGA-ACTCTTCAC-A-ATAAC-CATTTGGTAT--ACTATATTTTCAATAGCCG-ATAC-T-T-TTA-A-A-G-TTA--TCTTAAT-------C-AGCT--TAAATTGATAAA-A---A---A-ATTTAATGT------TC--CT------CCAAAAT--GTATC-CATTTCCGAA----AATCAACAT-TT--------TCAATTG-TTTCT-----ACAATGTTAATT
gi|110926 : A-A-TGCGTTC-TTTT-TT-GAAACTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AACAA-TAA-AAAC--TGA-C-AAAACTCATTTGATAT--AATACATTTTCAATCGGTC-ATA--T-T-GTCAA-A-G-TTA--CC--AAT--ACAT-T-AAGT--T---TTATTAGA-A---A---A
gi|110927 : GTTC-TTTTTT--GAAACCTTAATTCTCGAAAGTTTCTCAAG-AA-AGA----AAC-A-AGA-ACACCTAG--C-AAAACTCATTTGATAT--AATACATTTTCAATCGGCC-ATA--T-T-TTCAA-A-G-TTA--TC--AAT--A----T-AAGT--T---TTA
gi|110925 : TTC-ATTT-C--AAAATCTTAATTCACGAAATATAT--AAA-AA-ATACC--AAT-A-TGA-ATTCCTCAC-A-ATAA-TCATTTGGTTT--ACTATATTTTCAATCGt
gi|110912 : gtcaaatta--CC--AAT--A----T-AATT--T---TTACCAGA-A---A---ACA---AA---------TC--AT------CCAAAAC--TTACA-AATTTCCGAG---CAATGTATAT-TTTTCGGCG-TCAAATG-GTTCTTTTC-AAAACATTAATTCTA-GAAAGATA--T---AAA----A---AAT-ACCAATATGAATT--CTT----T-ACAATAGC-CA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAA-----TAAGCTTAATTTGA-CAAAgcgatacgtttaataagcttagtttgacaaa
gi|110913 : --CC--AAT--A----T-AATT--T---TTACCAGA-A---A---AGA---AA---------TC--AT------CCAAAAT--TTACT-AATATCCGAG---CAATGTATAT-TTTTCGGCG-TCAAATG-GTTCTTTTC-AAAACCTTAATTCTA-GAAAGATA--T---CAA----A---AAT-ACCAATATG-ATT--CTT----T-ACACAAAC-CA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAA-----TAAGCTTAATTTGA-CAAAtgttcctccaaaatgaatccatttccgaaaataaacattt
gi|110911 : AGA-A---A---AGA---AA---------TC--AT------CCACAAT--TTACT-CATTTCCGAG---CAATAAATAT-CTTTCGCCG-TCAAATG-GTTCATTTC-AAAATCTTAATTCAT-GAAAGATA--T---CAA----A---AAT-ACCAATATGAATT--CCT----C-ACAATAAC-CA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAA-----TAAGCTAAGTTGGA-TAAAtgttcctccaaaatgtatccatttccgaaaataaacatttcgtcgcatttgtttcttcgcatgcaccgttcagaaagatctagaccctaaataaacaatgttcattacctttcagaattgcaagtttaatatatcat
gi|110914 : ttA---AA---------TC--GT------CCAAAAT--TTAAT-AATTTCCGAG---CAAAGTATAT-CTTTCGGCG-TCATATG-GTTCTTTTC-AAAACCTTAATTCTT-GAAAGTTA--T---CAA----A---A-T-ACCAATATGAATT--CTT----T-GCAATAAC-AA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAA-----TAAGCTTAATTTGA-CAAAtgatcctccaaaagggatccatttccggaaatcaacatat
gi|110922 : A---AA---------TCGCAT------TTAAAATCGTTAAA-TATTGACAA-----AATGTGCGG-TTTT-ATCG-TCAATGG-GTTCTCATT-GAAACCTTAATTCTT-GGAAGATA--CTC-AAG----A---AAG-A--AACATGAAAC--CCA------ACAAAACT-CA-TTTGATATAATACATTTTCAATCGATCATAT-TCTCAAAGTTACC--AA-----TA----TAATTTtcttcctccaaaatgtatccatttccgaaaataaacattt
gi|110915 : aaA---AA---------TC--AT------CCACAAT--TTACT-AATTTTCAAG---CAATGTATAT-TTTTCGG---TCAAATG-GGTCTTTT--AAAACCTTAATTCAC-GTAAGATA--T---CAA----A---GAT-ACCAATATGAATT--CTT----C-ACAGTTAC-CA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAA-----TTAGCTTAAATTGATCAAA
gi|110916 : ---CAATGTATAT-TTTTCGGCG-TCAAATT-GTTTTTTTC-AAAACCTTTATTCAC-GAAAGATA--T---AAA----A---AAT-ACCAATATGAATT--TCT----C-ACAATAAC-CA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCA-----TAAGCTTttttaatgttcctccaaaatgtatacatttccgaaaattaacattt
gi|110923 : caAATGTGCGG-TTTT-ATCG-TCAATGG-GTTCTTTTT-GAAACCTTAATTCTT-GAAAGATACTC---AAG----A---AAG-A--AACATGAAAA--CCT----T-GAAAAAACTCA-TTTGATATAATACATTTTCAATCGATCATA--TTCTCAAGTTACC--AA-----TA----TAATTT
gi|110924 : AATGTGCGG-TTTT-ATCG-TCAATGG-GTTCTCTTT-GAAACCTTAATTCTT-GAAAGATA--CTC-AAG----A---AAG-A--AACATGAAAA--CCT----G-GAAAAACT-CA-TTCAATATAATACATTTTCAATCGATCATAT-TCTCAAAGTTACCAATA-----TAAGTTT
gi|110917 : AATGTATAT-TTTCTCGCA-TCCAATG-GTTCTTTTC-AACACCTTAATTCAC-GAAAGATA--T---AAA----A---AAT-ACCAATATGAATT--CTT----C-ACAATAAC-CA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGA-----TAAGTTTTAATTGA-TAAA
gi|110918 : AATGTATAT-TTTTCGGCC-TCAAATG-GTTCTTTTC-AAAATCTTAATTCAC-GAAAGATA--T---CAA----A---AAT-ACCAACATGAATT--CCTCAAAT-ACAAT----CA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAA-----TAAGCTTAAATTGA-TAAAaaaattaatgttccaccaaaatgtatccatttccaa
gi|110919 : TTTCGCCG-TCAAATG-GTTCATTTC-AAAATCTTAATTCAC-GAAAGATA--T---CAA----A---TAT-ACCAATATGAATT--CCT----C-ACAATAAC-CA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAA-----TAAGCTTAGTTTGA-TAAAggttcctccaaaattt
gi|110920 : CG-TCAAATG-GTTCTTTTC-AAAACCTTGATTCTA-GAAAGATA--T---CAA----A---AAT-ACCAATATGAATC--CTT----T-ACAATTAC-CA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAA-----TAAGCTTAATTTGA-CAAAtgttcctccaaaacggatccatttccgaaaatcaacatat
gi|110921 : CA-TCAAATG-GTTCTTTTC-AAAACCTTAATT-TACGAAAGATA--T---AAA----AAAAAAT-ACCAATATGAACT--CTT----C-ACAATAAC-CA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAA-----TCAGCTTAAATTGA-TAAAtgttcctccaaaatgtaacaatttccgaaaataaacattt
gi|110925 : G-TCAAATT-ATTCATTTC-AAAATCTTAATTCAC-GAAATATA--T---AAA----A---AAT-ACCAATATGAATT--CCT----C-ACAATAAT-CA-TTTGGTTTACTATATTTTCAATCGGCGATAC--------GT----TTAA-----TAAGCTTAGTTTGA-CAAAaaaatttaatgttcctccaaaatgtatccatttccgaaaatcaacattttcaattgtttctacaatgttaatt
gi|110926 : AATGCGTTCTTTTTTGAAACTTTAATTCTC-GAAAGATA--CTCAAGA----A---AGA-AACAATAAAAACT--G--------ACAAAACT-CA-TTTGATATAATACATTTTCAATCGGTCATAT-TGTCAAAGTTACC--AATACATTAAGTTTTATTAGA-AAA
gi|110927 : -GTTCTTTTTTGAAACCTTAATTCTC-GAAAGTT---TCTCAAG----A---AAG-A--AACAAGAACA--CCT----A-GCAAAACT-CA-TTTGATATAATACATTTTCAATCGGCCATAT-TTTCAAAGTTATCAATA-----TAAGTTTTAT
Alignments
lowQualScore : 111111111 11111111 1111 22222 1 1 111
lowQualScore : 888888 3 1 000000000 2 2 3 66666666 33 2 0 1 1 5555 1 0 1 5 3333 1 33 22 00000 1 0 77 44 1 2 1 0 1 1 44 22 666 1 1 66666666 2 333 222 1 1 1 11 1 3333 555 1 1 22 3 1 1 3 1 3
lowQualScore : ...... . . ......... . . . ........ .. . . . . .... . . . . .... . .. .. ..... . . .. .. . . . . . . .. .. ... . . ........ . ... ... . . . .. . .... ... . . .. . . . . . .
lowQualScore : 888888 1 0 777777777 6 3 8 11111111 22 1 3 0 7 0000 7 9 7 2 7777 7 99 00 77777 7 3 66 77 7 2 7 4 7 7 44 22 888 6 0 33333333 0 000 999 7 5 5 66 0 4444 666 6 6 22 2 6 0 3 2 5
consensus : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-TGAAAACCT-GNA-AAAACTCATTTGATATAATACATTTTCAATCGGTCATA--TT-NT-C-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGAAAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----A---AAT-ACCAATATGAATT-CT--TCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
Reference ( family-650 ) : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTTAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATNAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-TGAANNCCTCGNA-AAAACTCATTTGATATAATACATTTTCAATCGGTCATA--TT-TT-C-A-A-G-TT-ACC--AAT--A---T-AANTTTTATTAGAAAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCNCGAAAGATATNAA----A---AAT-ACCAATATGAATT-CC--TCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGNCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110898 : TATTGATATT------TAAA-TGATTTGTTTCATA---CCTAAACTTCAAATTGGTAAAGGTTAGAAGGAATATTTCGTCCATTAAAAAGTTTA---------AAATCGCATT-AAAATCGATAAAT-AAAGTATAAACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGAAAACCTTGAA-AAAACTCATTTGATATAATACATTTTCAATCGATCATA--TT-CT-C-A-A-G-TT-ACC--AAT--A---T-AATTTTTACCAGAAAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----A---AAT-ACCAATATGAATT-CT--TTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110899 : TATTGATATT------TAAA-TGATTTGTTTTATAATACCTAAACTTTAAATTGATAAAGGTTAGAAGAAATAGTTCGTCCTTTAAAATGTTTA---------AAATAGCATTTAAAATCGATA----AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGAAAACCT-GGA-AAAACTCATTCAATATAATACATTTTCAATCGATCATA--TT-CT-CAA-A-G-TT-ACC--AAT--A---T-AAGTTTTACCAAAAAGGAAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATC-A----A---AAT-ACCAATATGAATT-CT--TTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110900 : TAGTGATATT------TAAA-CGATTTGTTAGTTAATACCAAAACTTCAAATTGATAAAGGTAAGAAGAAATATTTCGTCTAATAAAATGTTTA---------AAATCGCATTTAAAATCGATCAAT-----T-TTGACAA--ATTGTGCGGTTTT-ATCGTCAATGGGTTC-TTT-----G-AAACATTAGTTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-TGAAAATCTAG---AAAACTCATTTGATATAAAACATTTTCAATCGATCATA--TT-CT-C-A-AAG-TT-ACC--AAT--A---T-AATTTTCACCAGAAAAGAAA--------TTATCCGAAATTTACTAATTTCCG---AG---CAATATATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----A---AAT-ACCAATATGAATC-CT--TTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110901 : TATTGATATTGTAAATTGAA-TGATTTGTTTCATAATATCTAAACTTTAAATTAGTTAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCACATTCAAACTAGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-AATAAAAACT--GAC-AAAACTCATTTGATATAATACATTTTCAATCGGTCATA--TT-GT-C-A-AAG-TT-ACC--AAT--ACATT-AAGTTTTATTAGAAAAGAAA--------TCATCCACAATTTACTCATTTTCG---AG---GAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----A---AAT-ACCAATATGAATT-CT--TCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110902 : TATTGATCTT------TAAA-TGATTTGTTTCATAATATCTAAACTTTAAATTGGTAAAGGTTACAAGATATAGTTCGCCCAATAAAATGTTTA---------AAATCACATTCAAAATCGA---AC-AA--TATTGACAA--AATGTGTGGTTTT-ATACTCAATGCGTTC-TTTT-T--TTAAACCTTAATTCTCGAAAAATACTCAAG-AA-AGA----AAC-A-AGAAATCCT-GAC-AAAACTCACTTGATAAAATACATTTTCAATCGGTCATA--TT-GT-C-A-AAG-TT-ACC--AAT--AAATT-AAGTTTTATTAGAAAAGAAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----A---GAT-ACCAATATGAATT-CT--TCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAA
gi|110903 : TATTGATATT------TTAA-TGATTTGTTTCATAAAACCTAAACTTTAAATACATAAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTAA---------AAATCACATTAAAAA---ATCAATCAA--TATTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-ATATTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-AGAAAACCT-GAC-AAAACTGATTTGATATAATACATTTTCAATCG-TCATA--TT-TT-C-A-AAG-TT-ACC--AATTTA---TTAAGTTTTATAAGAAAAGTAA--------TCATCCACAATTTAATAATTTCCT---CA---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----A---AAT-ACCAATATGAATT-TC--TCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTAGATTGA-
gi|110904 : TATTGATATT------CAAA-TGATTCATTTCATAATACCTAAACTTTCAATTGGTAAAGGTTAAAAGAAATATTTCGTCCAATTAAATGTTAA---------AAATCACATTCAAAGTCGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGAGTTT-TGTT-C--A-AAACCTTAATTCTCGAAAGATACTCAAG-AA-AGA----CAC-A-AAACAAACTGGCA-AAA-TTCATTTGATATAATACATTTTCAATCAGTCGTG--TTGTT-A-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGAAAAGAAA--------GCATCCAAAATTTACTCTTTTCCG---AG---CAATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----A---AAT-ACCAACATGAATT-CC--TCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAA
gi|110905 : TATTGATATT------TAAA-AGATTTGTTTCATAATAC------TTCAAACTGGTAAAGGTTAGAAGAAATCTTTCGTCCAATAAAAT-TTTA---------AAATCGCATTCAAAATCGATCAGT-A-----TTTACAA--TATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TTTA-AAACCTTAATTCTCGAAAGTTACTCAAG-AA-AGA----AAC-A-AGAAAATCT-GGC-AAAACTCATTTAATATAATACTTTTTCAATCGGTCATT--TT-GT-CAA-A-A-TT-ATC--AAT--A---T-AAGTTTTATTAGAAAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----A---AAT-ACCAATATGAATT-CC--TCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110906 : TATTGATATT------TAAA-AGATTTGTTTCATAATACCTAAACATCAAATTGGTAAAGGTTAAAGGAAATATTTCGTTCAGT-----------------------CGCATTCAAAATCGATAAGT-A-----TTTACAA--AATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAG-AA-AGA----AAC-A-AGAACACCTAGC--AAAACTCATTTGATATAATACATTTTCAATCGGCCATA--TT-TT-CAA-A-G-TT-ATC--AAT--A---T-AAGTTTTATAAGAAAAGAAA--------CCATCCAAAATTTACTCATTTCCG---AG---CAACGTATAT-TTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----A---TAT-ACCAATATGAATT-CC--TCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAA
gi|110907 : TATTGATATT------TAAAATACTTTTTTTCATTATACCTAAACTTCAACTTGGTAAAGGCTAAAAGAAATATTTCGTCCAATAAAATATTTA---------AAGTCGCATTCAAAATCGATCAGT-A-----TTTACAA--AATGAGCGGTTTT-TTCGTCAAGATGTTC-TTTTAT--G-AAACCTTATTTCTCGAAAGTTGCTCAGG-AA-AAA----AAA-A--GAAAACCTGGCA-AAA-CTCATCTGATATAATACATTT-CAATCGGTCATA--TT-GT-C-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATTAGAAAAGAAA--------TCATCCAACATCTACTCATTACCA---AG---CAATGTATAT-TTTTCGACG-TCAAATGATTCATTTCA-AAACCTTAATTCACGAAAGATATAAA----A---AAT-ACCAATATGAATT-GT--TCACT-ATAACCA-TTTGGT-------------AATCGACGATAC--TTTAAAGTTATTTTAATAAGCTTATTTTGA-TAAA
gi|110908 : TATTGATATT------AAAA-TGATTTGTTTCAGTATATCTAAACTTTGAATTACTAAAGGTAAGAAGAAATAATTTGTCCAATTAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAACGCGTTCCTTTT-T--T-AAACCTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-AGAAAAACT--GA-AAAACTCATTTAATATAATACATTTGTAATCGGTCATA--TA-GCAC-A-A---TT-ACT--TAT--AAATT-AAGTTTTATTAGAAAAGAAA--------TCATCCACAATTTCGTCATTTCCG---AG---CATTGTATTTGTTTTCGGCA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT-CT--TCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110909 : TATTGATATT------TAAA-TGATTTATTTCATTATATCTAAACTTTGAATTACTAA-GGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAATGCGTTC-CTTT-T--T-TAATTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AAC-A-AGAAAAACT-GAC-GAAACTCATTTGATATAATACATTTGCAATCGGTCGTA---T-AG-C-ACA-G-TT-ACC--AAT--AAATT-GAGTTTTATTAGAAAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATG--CAT-TTGTCTGCGATCGTCTGGTT
gi|110910 : T------TAGG-TGGTTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTAAAAAGAAATATTTCGTCCATTAAAATGTTAA---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAG-AA-AGA----AAC-A-TGAAACCC---AACAAAACTCATTTGATATAATACATTTTCAATCGATCATA--TT-CT-C-A-AAG-TT-ACC--AAT--A---T-AATTTTTACCAGAAAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----A---AAT-ACCAATATG-ATT-CT--TTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAA
gi|110911 : TTAGAAAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----A---AAT-ACCAATATGAATT-CC--TCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110911 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCATGAAAGATA-TCAAA-AATACC----AAT-A-TGAATTCCTCACA-ATAAC-CATTTGGTATACTATATTCTCAATCGGCGACAC-TT-TT-A-A-A-G-TT-ATCTTAAT--AAGCT-AAGTTGGAT---AAATG--A--------TCCTCCAAAAGGGATCCATTTCCGGAAAT---CAACATATtgatcctccaaaagggatccatttccggaaatcaacatat
gi|110912 : ttagaaaagaaatcatccacaatttactcatttccgagcaataaatatcCC--AAT--A---T-AATTTTTACCAGAAAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----A---AAT-ACCAATATGAATT-CT--TTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110913 : CC--AAT--A---T-AATTTTTACCAGAAAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----A---AAT-ACCAATATG-ATT-CT--TTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAAtgttcctccaaaatgaatccatttccgaaaataaacattt
gi|110913 : CCAATATAATTTTTACCAGAAAAGAAATC--ATCCAAAAT---TTACT-AA--TATC--CGAGCAATGTATATTTTTCGGCGTCAAATGGTTC-TTTT-C--A-AAACCTTAATTCTAGAAAGATA-TCAAA-AATACC----AAT-A-TG-ATTCTTTACA-CAAAC-CATTTGGTATACTATATTTTCAATCACCGATA--CT-TT-A-A-A-ATTT-ATC--TAA--A---T-AAGCTTAATTTGACAAATGT--------TCCTCCAAAATGTATCCATTTCCG---AA----AATAAACA---TTTCGTCG--CATTTGTTTCTTCGCATGCACC---GTTCA-GAAAGATCTAGACCCTA---AATAAACAATGTTCATTACCTTTCAGA-ATTGCAAGTTTAATATATCATtgttcctccaaaatgtatccatttccgaaaataaacatttcgtcgcatttgtttcttcgcatgcaccgttcagaaagatctagaccctaaataaacaatgttcattacctttcagaattgcaagtttaatatatcat
gi|110914 : AAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATCAA----A---A-T-ACCAATATGAATT-CT--TTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110915 : AAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----A---GAT-ACCAATATGAATT-CT--TCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAAtcttcctccaaaatgtatccatttccgaaaataaacattt
gi|110916 : ---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----A---AAT-ACCAATATGAATT-TC--TCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTttttaatgttcctccaaaatgtatacatttccgaaaattaacattt
gi|110917 : caAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----A---AAT-ACCAATATGAATT-CT--TCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110918 : AATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----A---AAT-ACCAACATGAATT-CC--TCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAAaaaattaatgttccaccaaaatgtatccatttccaa
gi|110919 : TTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----A---TAT-ACCAATATGAATT-CC--TCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAAggttcctccaaaattt
gi|110919 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCACGAAAGATA-TCAAATAT-ACC----AAT-A-TGAATTCCTCACA-ATAAC-CATTTGGTATATTATATTTTCAATCGGCGATACTTT-TT-T-A-A-G-TT-ATT--TTA--A---T-AAGCTTAGTTTGATAAATGT--------TCCTCCAAAACGGATCCATTTCCG---AAAATCAACATATtgttcctccaaaacggatccatttccgaaaatcaacatat
gi|110920 : CG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----A---AAT-ACCAATATGAATC-CT--TTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110920 : CGTCAAATGGTTC-TTTT-C--A-AAACCTTGATTCTAGAAAGATA-TCAAA-AATACC----AAT-A-TGAATCCTTTACA-ATTAC-CATTTGGTATACTATATTTTCAATCGCCGATAC-TT-TT-A-A-A-A-TTAACT--TA---A---T-AAGCTTAATTTGACAAATGT--------TCCTCCAAAATGTAACAATTTCCG---AA----AATAAACAT-TTtgttcctccaaaatgtaacaatttccgaaaataaacattt
gi|110921 : CA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT-CT--TCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110921 : CATCAAATGGTTC-TTTT-C--A-AAACCTTAATTTACGAAAGATA-TAAAA-AA-AAATACCAAT-A-TGAACTCTTCACA-ATAAC-CATTTGGTATACTATATTTTCAATAGCCGATAC-TT-TT-A-A-A-G-TT-ATCTTAAT------C-AGCTTAAATTGATAAAAAAATTTAATGTTCCTCCAAAATGTATCCATTTCCG---AA----AATCAACAT-TT--------TCAATTGTTTCT----A-CAATGTTAATTaaaatttaatgttcctccaaaatgtatccatttccgaaaatcaacattttcaattgtttctacaatgttaatt
gi|110922 : A---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAG-AA-AGA----AAC-A-TGAAACC--CAAC-AAAACTCATTTGATATAATACATTTTCAATCGATCATA--TT-CT-CAA-A-G-TT-ACC--AAT--A---T-AATTT
gi|110923 : a--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGAAAACCTTGAA-AAAACTCATTTGATATAATACATTTTCAATCGATCATA--TT-CT-C-A-A-G-TT-ACC--AAT--A---T-AATTT
gi|110924 : --AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAG-AA-AGA----AAC-A-TGAAAACCT-GGA-AAAACTCATTCAATATAATACATTTTCAATCGATCATA--TT-CT-CAA-A-G-TT-ACC--AAT--A---T-AAGTTT
gi|110925 : G-TCAAATTATTCATTTCA-AAATCTTAATTCACGAAATATATAAA----A---AAT-ACCAATATGAATT-CC--TCACA-ATAATCA-TTTGGTTTACTATATTTTCAATCGGCGATAC--------GT----TTAATAAGCTTAGTTTGA-CAAA
gi|110926 : AATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAG-AA-AGA----AACAA-TAAAAAC--TGAC-AAAACTCATTTGATATAATACATTTTCAATCGGTCATA--TT-GT-CAA-A-G-TT-ACC--AAT--ACATT-AAGTTTTATTAGAAAA
gi|110927 : GTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAG-AA-AGA----AAC-A-AGAACACCTAGC--AAAACTCATTTGATATAATACATTTTCAATCGGCCATA--TT-TT-CAA-A-G-TT-ATC--AAT--A---T-AAGTTTTAT
Alignments
lowQualScore : 111111111 111111 1111 1111 1 111
lowQualScore : 888888 3 1 000000000 2 2 6 777777 0 33 2 0 1 1 5555 1 0 7 3333 4 0 1 0000 22 1 0 77 1 8 3 3 3 1 22 22 666 1 1 66666666 2 333 222 1 1 1 0 1 3333 555 1 222 3 1 3 1 3
lowQualScore : ...... . . ......... . . . ...... . .. . . . . .... . . . .... . . . .... .. . . .. . . . . . . .. .. ... . . ........ . ... ... . . . . . .... ... . ... . . . . .
lowQualScore : 888888 1 0 777777777 6 3 5 555555 7 22 1 3 0 7 0000 7 9 0 7777 4 8 7 5555 44 7 3 66 0 7 5 9 5 7 22 22 888 6 8 33333333 0 000 999 7 5 5 6 0 4444 666 6 888 2 6 3 2 5
consensus : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GGCAAA--ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
Reference ( family-650 ) : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GNAAAA--ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110898 : TATTGATATT------TAAA-TGATTTGTTTCATA---CCTAAACTTCAAATTGGTAAAGGTTAGAAGGAATATTTCGTCCATTAAAAAGTTTA---------AAATCGCATT-AAAATCGATAAAT-AAAGTATAAACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-TTGAAAAA--ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110899 : TATTGATATT------TAAA-TGATTTGTTTTATAATACCTAAACTTTAAATTGATAAAGGTTAGAAGAAATAGTTCGTCCTTTAAAATGTTTA---------AAATAGCATTTAAAATCGAT--A--AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAAAA--ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTTTACCAAA-AAGGAAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATC-A----AA---AT-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110900 : TAGTGATATT------TAAA-CGATTTGTTAGTTAATACCAAAACTTCAAATTGATAAAGGTAAGAAGAAATATTTCGTCTAATAAAATGTTTA---------AAATCGCATTTAAAATCGATCAAT-----T-TTGACAA--ATTGTGCGGTTTT-ATCGTCAATGGGTTC-TTT-----G-AAACATTAGTTCTCGAAAGATACTCAAGAA-AGA----AACATGAAAATC-T-AGAAAA---CTCATTTGATATAAAACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTCACCAGA-AAAGAAA--------TTATCCGAAATTTACTAATTTCCG---AG---CAATATATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110901 : TATTGATATTGTAAATTGAA-TGATTTGTTTCATAATATCTAAACTTTAAATTAGTTAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCACATTCAAACTAGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACAAA--ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTTCG---AG---GAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110902 : TATTGATCTT------TAAA-TGATTTGTTTCATAATATCTAAACTTTAAATTGGTAAAGGTTACAAGATATAGTTCGCCCAATAAAATGTTTA---------AAATCACATTCAAAATCGA---AC-AA--TATTGACAA--AATGTGTGGTTTT-ATACTCAATGCGTTC-TTTT-T--TTAAACCTTAATTCTCGAAAAATACTCAAGAA-AGA----AACAAGAAATCC-T-GACAAA--ACTCACTTGATAAAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAA
gi|110903 : TATTGATATT------TTAA-TGATTTGTTTCATAAAACCTAAACTTTAAATACATAAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTAA---------AAATCACATTAAAAA---ATCAATCAA--TATTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-ATATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAACC-T-GACAAA--ACTGATTTGATATAATACATTTTCAATCG-TCATA--TTTTC-A-AAG-TT-ACC--AATTTA---TTAAGTTTTATAAGA-AAAGTAA--------TCATCCACAATTTAATAATTTCCT---CA---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTAGATTGA-
gi|110904 : TATTGATATT------CAAA-TGATTCATTTCATAATACCTAAACTTTCAATTGGTAAAGGTTAAAAGAAATATTTCGTCCAATTAAATGTTAA---------AAATCACATTCAAAGTCGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGAGTTT-TGTT-C--A-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----CACAAAACAAAC-T-GGCAAA--ATTCATTTGATATAATACATTTTCAATCAGTCGTG--TTGTT-A-AAG-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------GCATCCAAAATTTACTCTTTTCCG---AG---CAATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAA
gi|110905 : TATTGATATT------TAAA-AGATTTGTTTCATAATAC------TTCAAACTGGTAAAGGTTAGAAGAAATCTTTCGTCCAATAAAAT-TTTA---------AAATCGCATTCAAAATCGATCAGT-A-----TTTACAA--TATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TTTA-AAACCTTAATTCTCGAAAGTTACTCAAGAA-AGA----AACAAGAAAATC-T-GGCAAA--ACTCATTTAATATAATACTTTTTCAATCGGTCATT--TTGTC-A-A-AATT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110906 : TATTGATATT------TAAA-AGATTTGTTTCATAATACCTAAACATCAAATTGGTAAAGGTTAAAGGAAATATTTCGTTCAGT-----------------------CGCATTCAAAATCGAT--A--AG--TATTTACAA--AATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCAAA--ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTC-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATAAGA-AAAGAAA--------CCATCCAAAATTTACTCATTTCCG---AG---CAACGTATAT-TTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAA
gi|110907 : TATTGATATT------TAAAATACTTTTTTTCATTATACCTAAACTTCAACTTGGTAAAGGCTAAAAGAAATATTTCGTCCAATAAAATATTTA---------AAGTCGCATTCAAAATCGATCAGT-A-----TTTACAA--AATGAGCGGTTTT-TTCGTCAAGATGTTC-TTTTAT--G-AAACCTTATTTCTCGAAAGTTGCTCAGGAA-AAA----AAAA-GAAAACC-T-GGCAAA--ACTCATCTGATATAATACATTT-CAATCGGTCATA--TTGTC-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAACATCTACTCATTACCA---AG---CAATGTATAT-TTTTCGACG-TCAAATGATTCATTTCA-AAACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---GTTCACT-ATAACCA-TTTGGT-------------AATCGACGATAC--TTTAAAGTTATTTTAATAAGCTTATTTTGA-TAAA
gi|110908 : TATTGATATT------AAAA-TGATTTGTTTCAGTATATCTAAACTTTGAATTACTAAAGGTAAGAAGAAATAATTTGTCCAATTAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAACGCGTTCCTTTT-T--T-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-G-AAAA--ACTCATTTAATATAATACATTTGTAATCGGTCATA--T-AGC-ACA-A-TT-ACT--TAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTCGTCATTTCCG---AG---CATTGTATTTGTTTTCGGCA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110909 : TATTGATATT------TAAA-TGATTTATTTCATTATATCTAAACTTTGAATTACTAA-GGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAATGCGTTC-CTTT-T--T-TAATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-GACGAA--ACTCATTTGATATAATACATTTGCAATCGGTCGTA---TAGC-ACA-G-TT-ACC--AAT--AAATT-GAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATG--CAT-TTGTCTGCGATCGTCTGGTT
gi|110910 : T------TAGG-TGGTTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTAAAAAGAAATATTTCGTCCATTAAAATGTTAA---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATGAAA-CC-C-AACAAA--ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAA
gi|110911 : TTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110911 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCATGAAAGATA-TCAAAAATACC----AATATGAATTCC-TCACAATA--AC-CATTTGGTATACTATATTCTCAATCGGCGACAC-TTTTA-A-A-G-TT-ATCTTAAT--AAGCT-AAGTTGGAT---A-AATG--A--------TCCTCCAAAAGGGATCCATTTCCGGAAAT---CAACATATtgatcctccaaaagggatccatttccggaaatcaacatat
gi|110912 : ttagaaaagaaatcatccacaatttactcatttccgagcaataaatatcCC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110913 : CC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAAtgttcctccaaaatgaatccatttccgaaaataaacattt
gi|110913 : CCAATATAATTTTTACCAGAAAAGAAATC--ATCCAAAAT---TTACT-AA--TATC--CGAGCAATGTATATTTTTCGGCGTCAAATGGTTC-TTTT-C--A-AAACCTTAATTCTAGAAAGATA-TCAAAAATACC----AATATGATTCTT-T-ACACAA--AC-CATTTGGTATACTATATTTTCAATCACCGATA--CTTTA-A-A-ATTT-ATC--TAA--A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTATCCATTTCCG---AA----AATAAACA---TTTCGTCG--CATTTGTTTCTTCGCATGCACC---GTTCA-GAAAGATCTAGACCCTAA---ATAAACAATGTTCATTACCTTTCAGA-ATTGCAAGTTTAATATATCATtgttcctccaaaatgtatccatttccgaaaataaacatttcgtcgcatttgtttcttcgcatgcaccgttcagaaagatctagaccctaaataaacaatgttcattacctttcagaattgcaagtttaatatatcat
gi|110914 : AAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATCAA----AA----T-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110915 : AAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAAtcttcctccaaaatgtatccatttccgaaaataaacattt
gi|110916 : ---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTttttaatgttcctccaaaatgtatacatttccgaaaattaacattt
gi|110917 : caAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110918 : AATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAAaaaattaatgttccaccaaaatgtatccatttccaa
gi|110919 : TTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAAggttcctccaaaattt
gi|110919 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCACGAAAGATA-TCAAATATACC----AATATGAATTCC-TCACAATA--AC-CATTTGGTATATTATATTTTCAATCGGCGATACTTTTTT-A-A-G-TT-ATT--TTA--A---T-AAGCTTAGTTTGA-TAAATGT--------TCCTCCAAAACGGATCCATTTCCG---AAAATCAACATATtgttcctccaaaacggatccatttccgaaaatcaacatat
gi|110920 : CG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110920 : CGTCAAATGGTTC-TTTT-C--A-AAACCTTGATTCTAGAAAGATA-TCAAAAATACC----AATATGAAT-CC-T-TTACAATTAC-CATTTGGTATACTATATTTTCAATCGCCGATAC-TTTTA-A-A-A-TTAACT--TA---A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTAACAATTTCCG---AA----AATAAACAT-TTtgttcctccaaaatgtaacaatttccgaaaataaacattt
gi|110921 : CA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110921 : CATCAAATGGTTC-TTTT-C--A-AAACCTTAATTTACGAAAGATA-TAAAAAA-AAATACCAATATGAACTCT-TCACAATA--AC-CATTTGGTATACTATATTTTCAATAGCCGATAC-TTTTA-A-A-G-TT-ATC--TTA--A---T-CAGCTTAAATTGATAAAAAAATTTAATGTTCCTCCAAAATGTATCCATTTCCG---AA----AATCAACAT-TT--------TCAATTGTTTCT----A-CAATGTTAATTaaaatttaatgttcctccaaaatgtatccatttccgaaaatcaacattttcaattgtttctacaatgttaatt
gi|110922 : A---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATG-AAACC-C-AACAAA--ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AATTT
gi|110923 : a--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACCTT-GAAAAA--ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTT
gi|110924 : --AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAAAA--ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTT
gi|110925 : G-TCAAATTATTCATTTCA-AAATCTTAATTCACGAAATATATAAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAATCA-TTTGGTTTACTATATTTTCAATCGGCGATAC--------GT----TTAATAAGCTTAGTTTGA-CAAA
gi|110926 : AATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACAAA--ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTCAA-A-G-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAA
gi|110927 : GTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCAAA--ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTCAA-A-G-TT-ATC--AAT--A---T-AAGTTTTAT
Alignments
lowQualScore : 111111111 111111 1111 1 1 111
lowQualScore : 888888 3 1 000000000 2 2 6 777777 0 33 2 0 1 1 5555 1 0 7 3333 1 1 1 0 1 5 1 1 0 77 1 0 3 2 3 1 22 22 666 1 1 66666666 2 333 222 1 1 1 0 1 3333 555 1 222 3 1 3 1 3
lowQualScore : ...... . . ......... . . . ...... . .. . . . . .... . . . .... . . . . . . . . . .. . . . . . . .. .. ... . . ........ . ... ... . . . . . .... ... . ... . . . . .
lowQualScore : 888888 1 0 777777777 6 3 5 555555 7 22 1 3 0 7 0000 7 9 0 7777 0 7 7 4 7 2 7 7 3 66 0 4 5 2 5 7 22 22 888 6 8 33333333 0 000 999 7 5 5 6 0 4444 666 6 888 2 6 3 2 5
consensus : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
Reference ( family-650 ) : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GGCA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110898 : TATTGATATT------TAAA-TGATTTGTTTCATA---CCTAAACTTCAAATTGGTAAAGGTTAGAAGGAATATTTCGTCCATTAAAAAGTTTA---------AAATCGCATT-AAAATCGATAAAT-AAAGTATAAACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-TTGAAA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110899 : TATTGATATT------TAAA-TGATTTGTTTTATAATACCTAAACTTTAAATTGATAAAGGTTAGAAGAAATAGTTCGTCCTTTAAAATGTTTA---------AAATAGCATTTAAAATCGAT--A--AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAA-A-A-ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTTTACCAAA-AAGGAAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATC-A----AA---AT-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110900 : TAGTGATATT------TAAA-CGATTTGTTAGTTAATACCAAAACTTCAAATTGATAAAGGTAAGAAGAAATATTTCGTCTAATAAAATGTTTA---------AAATCGCATTTAAAATCGATCAAT-----T-TTGACAA--ATTGTGCGGTTTT-ATCGTCAATGGGTTC-TTT-----G-AAACATTAGTTCTCGAAAGATACTCAAGAA-AGA----AACATGAAAATC-T-AG-A-A-A-ACTCATTTGATATAAAACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTCACCAGA-AAAGAAA--------TTATCCGAAATTTACTAATTTCCG---AG---CAATATATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110901 : TATTGATATTGTAAATTGAA-TGATTTGTTTCATAATATCTAAACTTTAAATTAGTTAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCACATTCAAACTAGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTTCG---AG---GAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110902 : TATTGATCTT------TAAA-TGATTTGTTTCATAATATCTAAACTTTAAATTGGTAAAGGTTACAAGATATAGTTCGCCCAATAAAATGTTTA---------AAATCACATTCAAAATCGA---AC-AA--TATTGACAA--AATGTGTGGTTTT-ATACTCAATGCGTTC-TTTT-T--TTAAACCTTAATTCTCGAAAAATACTCAAGAA-AGA----AACAAGAAATCC-T-GACA-A-A-ACTCACTTGATAAAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAA
gi|110903 : TATTGATATT------TTAA-TGATTTGTTTCATAAAACCTAAACTTTAAATACATAAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTAA---------AAATCACATTAAAAA---ATCAATCAA--TATTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-ATATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAACC-T-GACA-A-A-ACTGATTTGATATAATACATTTTCAATCG-TCATA--TTTTC-A-AAG-TT-ACC--AATTTA---TTAAGTTTTATAAGA-AAAGTAA--------TCATCCACAATTTAATAATTTCCT---CA---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTAGATTGA-
gi|110904 : TATTGATATT------CAAA-TGATTCATTTCATAATACCTAAACTTTCAATTGGTAAAGGTTAAAAGAAATATTTCGTCCAATTAAATGTTAA---------AAATCACATTCAAAGTCGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGAGTTT-TGTT-C--A-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----CACAAAACAAAC-T-GGCA-A-A-ATTCATTTGATATAATACATTTTCAATCAGTCGTG--TTGTT-A-AAG-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------GCATCCAAAATTTACTCTTTTCCG---AG---CAATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAA
gi|110905 : TATTGATATT------TAAA-AGATTTGTTTCATAATAC------TTCAAACTGGTAAAGGTTAGAAGAAATCTTTCGTCCAATAAAAT-TTTA---------AAATCGCATTCAAAATCGATCAGT-A-----TTTACAA--TATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TTTA-AAACCTTAATTCTCGAAAGTTACTCAAGAA-AGA----AACAAGAAAATC-T-GGCA-A-A-ACTCATTTAATATAATACTTTTTCAATCGGTCATT--TTGTC-A-A-AATT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110906 : TATTGATATT------TAAA-AGATTTGTTTCATAATACCTAAACATCAAATTGGTAAAGGTTAAAGGAAATATTTCGTTCAGT-----------------------CGCATTCAAAATCGAT--A--AG--TATTTACAA--AATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCA-A-A-ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTC-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATAAGA-AAAGAAA--------CCATCCAAAATTTACTCATTTCCG---AG---CAACGTATAT-TTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAA
gi|110907 : TATTGATATT------TAAAATACTTTTTTTCATTATACCTAAACTTCAACTTGGTAAAGGCTAAAAGAAATATTTCGTCCAATAAAATATTTA---------AAGTCGCATTCAAAATCGATCAGT-A-----TTTACAA--AATGAGCGGTTTT-TTCGTCAAGATGTTC-TTTTAT--G-AAACCTTATTTCTCGAAAGTTGCTCAGGAA-AAA----AA-AAGAAAACC-T-GGCA-A-A-ACTCATCTGATATAATACA-TTTCAATCGGTCATA--TTGTCAA-A-G-TT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAACATCTACTCATTACCA---AG---CAATGTATAT-TTTTCGACG-TCAAATGATTCATTTCA-AAACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---GTTCACT-ATAACCA-TTTGGT-------------AATCGACGATAC--TTTAAAGTTATTTTAATAAGCTTATTTTGA-TAAA
gi|110908 : TATTGATATT------AAAA-TGATTTGTTTCAGTATATCTAAACTTTGAATTACTAAAGGTAAGAAGAAATAATTTGTCCAATTAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAACGCGTTCCTTTT-T--T-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-GA-A-A-A-ACTCATTTAATATAATACATTTGTAATCGGTCATA--T-AGC-ACA-A-TT-ACT--TAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTCGTCATTTCCG---AG---CATTGTATTTGTTTTCGGCA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110909 : TATTGATATT------TAAA-TGATTTATTTCATTATATCTAAACTTTGAATTACTAA-GGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAATGCGTTC-CTTT-T--T-TAATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-GACG-A-A-ACTCATTTGATATAATACATTTGCAATCGGTCGTA---TAGC-ACA-G-TT-ACC--AAT--AAATT-GAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATG--CAT-TTGTCTGCGATCGTCTGGTT
gi|110910 : T------TAGG-TGGTTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTAAAAAGAAATATTTCGTCCATTAAAATGTTAA---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATGAAA-CC-C-AACA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAA
gi|110911 : TTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110911 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCATGAAAGATA-TCAAAAATACC----AATATGAATTCC-T-CACA-ATA-AC-CATTTGGTATACTATATTCTCAATCGGCGACAC-TTTTA-A-A-G-TT-ATCTTAAT--AAGCT-AAGTTGGAT---A-AATG--A--------TCCTCCAAAAGGGATCCATTTCCGGAAAT---CAACATATtgatcctccaaaagggatccatttccggaaatcaacatat
gi|110912 : ttagaaaagaaatcatccacaatttactcatttccgagcaataaatatcCC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110913 : CC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAAtgttcctccaaaatgaatccatttccgaaaataaacattt
gi|110913 : CCAATATAATTTTTACCAGAAAAGAAATC--ATCCAAAAT---TTACT-AA--TATC--CGAGCAATGTATATTTTTCGGCGTCAAATGGTTC-TTTT-C--A-AAACCTTAATTCTAGAAAGATA-TCAAAAATACC----AATATG-ATTCT-T-TACACA-A-AC-CATTTGGTATACTATATTTTCAATCACCGATA--CTTTA-A-A-ATTT-ATC--TAA--A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTATCCATTTCCG---AA----AATAAACA---TTTCGTCG--CATTTGTTTCTTCGCATGCACC---GTTCA-GAAAGATCTAGACCCTAA---ATAAACAATGTTCATTACCTTTCAGA-ATTGCAAGTTTAATATATCATtgttcctccaaaatgtatccatttccgaaaataaacatttcgtcgcatttgtttcttcgcatgcaccgttcagaaagatctagaccctaaataaacaatgttcattacctttcagaattgcaagtttaatatatcat
gi|110914 : AAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATCAA----AA----T-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110915 : AAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAAtcttcctccaaaatgtatccatttccgaaaataaacattt
gi|110916 : ---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTttttaatgttcctccaaaatgtatacatttccgaaaattaacattt
gi|110917 : caAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110918 : AATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAAaaaattaatgttccaccaaaatgtatccatttccaa
gi|110919 : TTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAAggttcctccaaaattt
gi|110919 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCACGAAAGATA-TCAAATATACC----AATATGAATTCC-T-CACA-ATA-AC-CATTTGGTATATTATATTTTCAATCGGCGATACTTTTTT-A-A-G-TT-ATT--TTA--A---T-AAGCTTAGTTTGA-TAAATGT--------TCCTCCAAAACGGATCCATTTCCG---AAAATCAACATATtgttcctccaaaacggatccatttccgaaaatcaacatat
gi|110920 : CG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110920 : CGTCAAATGGTTC-TTTT-C--A-AAACCTTGATTCTAGAAAGATA-TCAAAAATACC----AATATGAATCCT-T-TACA-A-TTAC-CATTTGGTATACTATATTTTCAATCGCCGATAC-TTTTA-A-A-A-TTAACT--TA---A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTAACAATTTCCG---AA----AATAAACAT-TTtgttcctccaaaatgtaacaatttccgaaaataaacattt
gi|110921 : CA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110921 : CATCAAATGGTTC-TTTT-C--A-AAACCTTAATTTACGAAAGATA-TAAAAAA-AAATACCAATATGAACTCT-T-CACA-ATA-AC-CATTTGGTATACTATATTTTCAATAGCCGATAC-TTTTA-A-A-G-TT-ATC--TTA--A---T-CAGCTTAAATTGATAAAAAAATTTAATGTTCCTCCAAAATGTATCCATTTCCG---AA----AATCAACAT-TT--------TCAATTGTTTCT----A-CAATGTTAATTaaaatttaatgttcctccaaaatgtatccatttccgaaaatcaacattttcaattgtttctacaatgttaatt
gi|110922 : A---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATG-AAACC-C-AACA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AATTT
gi|110923 : a--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACCTT-GAAA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTT
gi|110924 : --AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAA-A-A-ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTT
gi|110925 : G-TCAAATTATTCATTTCA-AAATCTTAATTCACGAAATATATAAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAATCA-TTTGGTTTACTATATTTTCAATCGGCGATAC--------GT----TTAATAAGCTTAGTTTGA-CAAA
gi|110926 : AATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTCAA-A-G-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAA
gi|110927 : GTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCA-A-A-ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTCAA-A-G-TT-ATC--AAT--A---T-AAGTTTTAT
Alignments
lowQualScore : 111111111 111111 1111 1 111
lowQualScore : 888888 3 1 000000000 2 2 6 777777 0 33 2 0 1 1 5555 1 0 7 3333 1 0 1 22 1 5 1 1 0 77 1 8 3 3 3 1 22 22 666 1 1 66666666 2 333 222 1 1 1 0 1 3333 555 1 222 3 1 3 1 3
lowQualScore : ...... . . ......... . . . ...... . .. . . . . .... . . . .... . . . .. . . . . . .. . . . . . . .. .. ... . . ........ . ... ... . . . . . .... ... . ... . . . . .
lowQualScore : 888888 1 0 777777777 6 3 5 555555 7 22 1 3 0 7 0000 7 9 0 7777 0 8 7 11 7 2 7 7 3 66 0 7 5 9 5 7 22 22 888 6 8 33333333 0 000 999 7 5 5 6 0 4444 666 6 888 2 6 3 2 5
consensus : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
Reference ( family-650 ) : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110898 : TATTGATATT------TAAA-TGATTTGTTTCATA---CCTAAACTTCAAATTGGTAAAGGTTAGAAGGAATATTTCGTCCATTAAAAAGTTTA---------AAATCGCATT-AAAATCGATAAAT-AAAGTATAAACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-TTGAAA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110899 : TATTGATATT------TAAA-TGATTTGTTTTATAATACCTAAACTTTAAATTGATAAAGGTTAGAAGAAATAGTTCGTCCTTTAAAATGTTTA---------AAATAGCATTTAAAATCGAT--A--AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAA-A-A-ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTTTACCAAA-AAGGAAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATC-A----AA---AT-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110900 : TAGTGATATT------TAAA-CGATTTGTTAGTTAATACCAAAACTTCAAATTGATAAAGGTAAGAAGAAATATTTCGTCTAATAAAATGTTTA---------AAATCGCATTTAAAATCGATCAAT-----T-TTGACAA--ATTGTGCGGTTTT-ATCGTCAATGGGTTC-TTT-----G-AAACATTAGTTCTCGAAAGATACTCAAGAA-AGA----AACATGAAAATC-T--AGA-A-A-ACTCATTTGATATAAAACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTCACCAGA-AAAGAAA--------TTATCCGAAATTTACTAATTTCCG---AG---CAATATATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110901 : TATTGATATTGTAAATTGAA-TGATTTGTTTCATAATATCTAAACTTTAAATTAGTTAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCACATTCAAACTAGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTTCG---AG---GAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110902 : TATTGATCTT------TAAA-TGATTTGTTTCATAATATCTAAACTTTAAATTGGTAAAGGTTACAAGATATAGTTCGCCCAATAAAATGTTTA---------AAATCACATTCAAAATCGA---AC-AA--TATTGACAA--AATGTGTGGTTTT-ATACTCAATGCGTTC-TTTT-T--TTAAACCTTAATTCTCGAAAAATACTCAAGAA-AGA----AACAAGAAATCC-T-GACA-A-A-ACTCACTTGATAAAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAA
gi|110903 : TATTGATATT------TTAA-TGATTTGTTTCATAAAACCTAAACTTTAAATACATAAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTAA---------AAATCACATTAAAAA---ATCAATCAA--TATTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-ATATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAACC-T-GACA-A-A-ACTGATTTGATATAATACATTTTCAATCG-TCATA--TTTTC-A-AAG-TT-ACC--AATTTA---TTAAGTTTTATAAGA-AAAGTAA--------TCATCCACAATTTAATAATTTCCT---CA---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTAGATTGA-
gi|110904 : TATTGATATT------CAAA-TGATTCATTTCATAATACCTAAACTTTCAATTGGTAAAGGTTAAAAGAAATATTTCGTCCAATTAAATGTTAA---------AAATCACATTCAAAGTCGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGAGTTT-TGTT-C--A-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----CACAAAACAAAC-T-GGCA-A-A-ATTCATTTGATATAATACATTTTCAATCAGTCGTG--TTGTT-A-AAG-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------GCATCCAAAATTTACTCTTTTCCG---AG---CAATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAA
gi|110905 : TATTGATATT------TAAA-AGATTTGTTTCATAATAC------TTCAAACTGGTAAAGGTTAGAAGAAATCTTTCGTCCAATAAAAT-TTTA---------AAATCGCATTCAAAATCGATCAGT-A-----TTTACAA--TATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TTTA-AAACCTTAATTCTCGAAAGTTACTCAAGAA-AGA----AACAAGAAAATC-T-GGCA-A-A-ACTCATTTAATATAATACTTTTTCAATCGGTCATT--TTGTC-A-A-AATT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110906 : TATTGATATT------TAAA-AGATTTGTTTCATAATACCTAAACATCAAATTGGTAAAGGTTAAAGGAAATATTTCGTTCAGT-----------------------CGCATTCAAAATCGAT--A--AG--TATTTACAA--AATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCA-A-A-ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTC-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATAAGA-AAAGAAA--------CCATCCAAAATTTACTCATTTCCG---AG---CAACGTATAT-TTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAA
gi|110907 : TATTGATATT------TAAAATACTTTTTTTCATTATACCTAAACTTCAACTTGGTAAAGGCTAAAAGAAATATTTCGTCCAATAAAATATTTA---------AAGTCGCATTCAAAATCGATCAGT-A-----TTTACAA--AATGAGCGGTTTT-TTCGTCAAGATGTTC-TTTTAT--G-AAACCTTATTTCTCGAAAGTTGCTCAGGAA-AAA----AA-AAGAAAACC-T-GGCA-A-A-ACTCATCTGATATAATACATTT-CAATCGGTCATA--TTGTC-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAACATCTACTCATTACCA---AG---CAATGTATAT-TTTTCGACG-TCAAATGATTCATTTCA-AAACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---GTTCACT-ATAACCA-TTTGGT-------------AATCGACGATAC--TTTAAAGTTATTTTAATAAGCTTATTTTGA-TAAA
gi|110908 : TATTGATATT------AAAA-TGATTTGTTTCAGTATATCTAAACTTTGAATTACTAAAGGTAAGAAGAAATAATTTGTCCAATTAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAACGCGTTCCTTTT-T--T-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-GA-A-A-A-ACTCATTTAATATAATACATTTGTAATCGGTCATA--T-AGC-ACA-A-TT-ACT--TAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTCGTCATTTCCG---AG---CATTGTATTTGTTTTCGGCA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110909 : TATTGATATT------TAAA-TGATTTATTTCATTATATCTAAACTTTGAATTACTAA-GGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAATGCGTTC-CTTT-T--T-TAATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-GACG-A-A-ACTCATTTGATATAATACATTTGCAATCGGTCGTA---TAGC-ACA-G-TT-ACC--AAT--AAATT-GAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATG--CAT-TTGTCTGCGATCGTCTGGTT
gi|110910 : T------TAGG-TGGTTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTAAAAAGAAATATTTCGTCCATTAAAATGTTAA---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATGAAA-CC-C-AACA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAA
gi|110911 : TTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110911 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCATGAAAGATA-TCAAAAATACC----AATATGAATTCC-T-CACA-ATA-AC-CATTTGGTATACTATATTCTCAATCGGCGACAC-TTTTA-A-A-G-TT-ATCTTAAT--AAGCT-AAGTTGGAT---A-AATG--A--------TCCTCCAAAAGGGATCCATTTCCGGAAAT---CAACATATtgatcctccaaaagggatccatttccggaaatcaacatat
gi|110912 : ttagaaaagaaatcatccacaatttactcatttccgagcaataaatatcCC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110913 : CC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAAtgttcctccaaaatgaatccatttccgaaaataaacattt
gi|110913 : CCAATATAATTTTTACCAGAAAAGAAATC--ATCCAAAAT---TTACT-AA--TATC--CGAGCAATGTATATTTTTCGGCGTCAAATGGTTC-TTTT-C--A-AAACCTTAATTCTAGAAAGATA-TCAAAAATACC----AATATGATT-CT-T-TACACA-A-AC-CATTTGGTATACTATATTTTCAATCACCGATA--CTTTA-A-A-ATTT-ATC--TAA--A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTATCCATTTCCG---AA----AATAAACA---TTTCGTCG--CATTTGTTTCTTCGCATGCACC---GTTCA-GAAAGATCTAGACCCTAA---ATAAACAATGTTCATTACCTTTCAGA-ATTGCAAGTTTAATATATCATtgttcctccaaaatgtatccatttccgaaaataaacatttcgtcgcatttgtttcttcgcatgcaccgttcagaaagatctagaccctaaataaacaatgttcattacctttcagaattgcaagtttaatatatcat
gi|110914 : AAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATCAA----AA----T-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110915 : AAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAAtcttcctccaaaatgtatccatttccgaaaataaacattt
gi|110916 : ---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTttttaatgttcctccaaaatgtatacatttccgaaaattaacattt
gi|110917 : caAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110918 : AATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAAaaaattaatgttccaccaaaatgtatccatttccaa
gi|110919 : TTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAAggttcctccaaaattt
gi|110919 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCACGAAAGATA-TCAAATATACC----AATATGAATTCC-T-CACA-ATA-AC-CATTTGGTATATTATATTTTCAATCGGCGATACTTTTTT-A-A-G-TT-ATT--TTA--A---T-AAGCTTAGTTTGA-TAAATGT--------TCCTCCAAAACGGATCCATTTCCG---AAAATCAACATATtgttcctccaaaacggatccatttccgaaaatcaacatat
gi|110920 : CG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110920 : CGTCAAATGGTTC-TTTT-C--A-AAACCTTGATTCTAGAAAGATA-TCAAAAATACC----AATATGAATCCT-T-TACA-A-TTAC-CATTTGGTATACTATATTTTCAATCGCCGATAC-TTTTA-A-A-A-TTAACT--TA---A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTAACAATTTCCG---AA----AATAAACAT-TTtgttcctccaaaatgtaacaatttccgaaaataaacattt
gi|110921 : CA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110921 : CATCAAATGGTTC-TTTT-C--A-AAACCTTAATTTACGAAAGATA-TAAAAAA-AAATACCAATATGAACTCT-T-CACA-ATA-AC-CATTTGGTATACTATATTTTCAATAGCCGATAC-TTTTA-A-A-G-TT-ATC--TTA--A---T-CAGCTTAAATTGATAAAAAAATTTAATGTTCCTCCAAAATGTATCCATTTCCG---AA----AATCAACAT-TT--------TCAATTGTTTCT----A-CAATGTTAATTaaaatttaatgttcctccaaaatgtatccatttccgaaaatcaacattttcaattgtttctacaatgttaatt
gi|110922 : A---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATG-AAACC-C-AACA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AATTT
gi|110923 : a--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACCTT-GAAA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTT
gi|110924 : --AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAA-A-A-ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTT
gi|110925 : G-TCAAATTATTCATTTCA-AAATCTTAATTCACGAAATATATAAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAATCA-TTTGGTTTACTATATTTTCAATCGGCGATAC--------GT----TTAATAAGCTTAGTTTGA-CAAA
gi|110926 : AATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTCAA-A-G-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAA
gi|110927 : GTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCA-A-A-ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTCAA-A-G-TT-ATC--AAT--A---T-AAGTTTTAT
blockSeqs : GTAAAT A G CCAGAAAAG T A C TCAA GC C C TTT T T TACC T T G C T T T CT C A C A A A TT TT CAT T T TTTAATGT A GAA AAT G A T C CCCT AAA A ACC T G T T T
blockSeqs : . . T . T A C CAA . . . TT . T . T . G . T . T C C A C A T . . . AAT . . . A . . . . . C . AAA . . T . T T T
blockSeqs : . . G . C A C CAA . . . TT . T . A . G . T . T C G A . A . . . . AAT . . . C . . . . . A . . . . . . . A .
blockSeqs : . . G . C A C CAA . . . TT . T . A . G . . . T C G A . A . . . . AAT . . . A . . . . . C . . . . . . . A .
blockSeqs : . . G . A A C TAA . . . AT . . . A . G . . . T . T A . A . . . . AGC . . . A . . . . . A . . . . . . . A .
blockSeqs : . . T . C A C AA . . . TT . . . A . G . . . T . G . . A . . . . CAT . . . C . . . . . C . . . . . . . A .
blockSeqs : . . T . C A T TA . . . TT . . . A . A . . . T . G . . A . . . . . . . . C . . . . . C . . . . . . . T .
blockSeqs : . . T . C A T TA . . . T . . . A . G . . . T . T . . A . . . . . . . . C . . . . . C . . . . . . . T .
blockSeqs : . . T . C A T TA . . . T . . . A . G . . . T . G . . . . . . . . . . . C . . . . . A . . . . . . . T .
blockSeqs : . . A . T . . AG . . . C . . . A . G . . . T . A . . . . . . . . . . . C . . . . . A . . . . . . . A .
blockSeqs : . . G . C . . TA . . . T . . . A . A . . . T . A . . . . . . . . . . . C . . . . . C . . . . . . . T .
blockSeqs : . . T . T . . T . . . T . . . T . C . . . T . C . . . . . . . . . . . A . . . . . C . . . . . . . T .
blockSeqs : . . . . A . . . T . . . T . T . . . T . T . . . . . . . . . . . C . . . . . A . . . . . . . T .
blockSeqs : . . . . A . . . C . . . T . C . . . T . T . . . . . . . . . . . C . . . . . C . . . . . . . T .
blockSeqs : . . . C . . . T . T . . . T . T . . . . . . . . . . . A . . . . . A . . . . . . . T .
blockSeqs : . . . C . . . T . C . . . T . T . . . . . . . . . . . A . . . . . C . . . . . . . A .
blockSeqs : . . C . . . T . A . . . T . T . . . . . . . . . . . C . . . . . C . . . . . . . A .
blockSeqs : . . C . . . T . G . . . . . C . . . . . . . . . . . A . . . . . A . . . . . . . A .
blockSeqs : . T . . . T . G . . . . . C . . . . . . . . . . . A . . . . . A . . . . . . . T .
blockSeqs : . T . . . T . G . . . . . C . . . . . . . . . . . C . . . . . C . . . . . . . T .
blockSeqs : . T . . . A . A . . . . . G . . . . . . . . . . . A . . . . . C . . . . . . . A .
blockSeqs : . . . . . A . . . . . . . T . . . . . . . . . . C . . . . . C . . . . . . . T .
blockSeqs : . . . . . . . . A . . . . . . .
blockSeqs : . . . . . . A . . . . . .
blockSeqs : . .
blockSeqs : .
blockSeqCons : TAA*** G*
originalCons : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
finalCons : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAATAA---TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-TG-ACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
Alignments
lowQualScore : 111111111 111111 1111 1 111
lowQualScore : 888888 3 1 000000000 2 2 6 777777 0 33 2 0 1 1 5555 1 0 7 3333 1 0 1 22 1 5 1 1 0 77 1 8 3 3 3 1 22 22 666 1 1 66666666 2 333 222 1 1 1 0 1 3333 555 1 222 3 1 3 1 3
lowQualScore : ...... . . ......... . . . ...... . .. . . . . .... . . . .... . . . .. . . . . . .. . . . . . . .. .. ... . . ........ . ... ... . . . . . .... ... . ... . . . . .
lowQualScore : 888888 1 0 777777777 6 3 5 555555 7 22 1 3 0 7 0000 7 9 0 7777 0 8 7 11 7 2 7 7 3 66 0 7 5 9 5 7 22 22 888 6 8 33333333 0 000 999 7 5 5 6 0 4444 666 6 888 2 6 3 2 5
consensus : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
Reference ( family-650 ) : TATTGATATT------TAAA-TGATTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTTAGAAGAAATANTTCGTCCAATAAAATGTTTA---------AAATCGCATTCAAAATCGATCAAT-AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-C--G-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACANGAAAACC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTNTC-A-A-G-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAAAATTTACTCATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCACGAAAGATATCAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110898 : TATTGATATT------TAAA-TGATTTGTTTCATA---CCTAAACTTCAAATTGGTAAAGGTTAGAAGGAATATTTCGTCCATTAAAAAGTTTA---------AAATCGCATT-AAAATCGATAAAT-AAAGTATAAACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-TTGAAA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110899 : TATTGATATT------TAAA-TGATTTGTTTTATAATACCTAAACTTTAAATTGATAAAGGTTAGAAGAAATAGTTCGTCCTTTAAAATGTTTA---------AAATAGCATTTAAAATCGAT--A--AA--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAA-A-A-ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTTTACCAAA-AAGGAAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATC-A----AA---AT-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110900 : TAGTGATATT------TAAA-CGATTTGTTAGTTAATACCAAAACTTCAAATTGATAAAGGTAAGAAGAAATATTTCGTCTAATAAAATGTTTA---------AAATCGCATTTAAAATCGATCAAT-----T-TTGACAA--ATTGTGCGGTTTT-ATCGTCAATGGGTTC-TTT-----G-AAACATTAGTTCTCGAAAGATACTCAAGAA-AGA----AACATGAAAATC-T--AGA-A-A-ACTCATTTGATATAAAACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTCACCAGA-AAAGAAA--------TTATCCGAAATTTACTAATTTCCG---AG---CAATATATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110901 : TATTGATATTGTAAATTGAA-TGATTTGTTTCATAATATCTAAACTTTAAATTAGTTAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCACATTCAAACTAGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTTCG---AG---GAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110902 : TATTGATCTT------TAAA-TGATTTGTTTCATAATATCTAAACTTTAAATTGGTAAAGGTTACAAGATATAGTTCGCCCAATAAAATGTTTA---------AAATCACATTCAAAATCGA---AC-AA--TATTGACAA--AATGTGTGGTTTT-ATACTCAATGCGTTC-TTTT-T--TTAAACCTTAATTCTCGAAAAATACTCAAGAA-AGA----AACAAGAAATCC-T-GACA-A-A-ACTCACTTGATAAAATACATTTTCAATCGGTCATA--TTGTC-A-AAG-TT-ACC--AAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAA
gi|110903 : TATTGATATT------TTAA-TGATTTGTTTCATAAAACCTAAACTTTAAATACATAAAGGTTAGAAGAAATAGTTCGTCCAATAAAATGTTAA---------AAATCACATTAAAAA---ATCAATCAA--TATTGACAA--AATGTGCGGTTTT-ATCCTCAATGCGTTC-TTTT-TT-G-ATATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAACC-T-GACA-A-A-ACTGATTTGATATAATACATTTTCAATCG-TCATA--TTTTC-A-AAG-TT-ACC--AATTTA---TTAAGTTTTATAAGA-AAAGTAA--------TCATCCACAATTTAATAATTTCCT---CA---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTAGATTGA-
gi|110904 : TATTGATATT------CAAA-TGATTCATTTCATAATACCTAAACTTTCAATTGGTAAAGGTTAAAAGAAATATTTCGTCCAATTAAATGTTAA---------AAATCACATTCAAAGTCGATCAAT-A-----TTGACAA--AATGTGCGGTTTT-ATCCTCAATGAGTTT-TGTT-C--A-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----CACAAAACAAAC-T-GGCA-A-A-ATTCATTTGATATAATACATTTTCAATCAGTCGTG--TTGTT-A-AAG-TT-ACC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------GCATCCAAAATTTACTCTTTTCCG---AG---CAATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAA
gi|110905 : TATTGATATT------TAAA-AGATTTGTTTCATAATAC------TTCAAACTGGTAAAGGTTAGAAGAAATCTTTCGTCCAATAAAAT-TTTA---------AAATCGCATTCAAAATCGATCAGT-A-----TTTACAA--TATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TTTA-AAACCTTAATTCTCGAAAGTTACTCAAGAA-AGA----AACAAGAAAATC-T-GGCA-A-A-ACTCATTTAATATAATACTTTTTCAATCGGTCATT--TTGTC-A-A-AATT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110906 : TATTGATATT------TAAA-AGATTTGTTTCATAATACCTAAACATCAAATTGGTAAAGGTTAAAGGAAATATTTCGTTCAGT-----------------------CGCATTCAAAATCGAT--A--AG--TATTTACAA--AATGAGCGGTTTT-ATTCTCAGTATGTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCA-A-A-ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTC-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATAAGA-AAAGAAA--------CCATCCAAAATTTACTCATTTCCG---AG---CAACGTATAT-TTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAA
gi|110907 : TATTGATATT------TAAAATACTTTTTTTCATTATACCTAAACTTCAACTTGGTAAAGGCTAAAAGAAATATTTCGTCCAATAAAATATTTA---------AAGTCGCATTCAAAATCGATCAGT-A-----TTTACAA--AATGAGCGGTTTT-TTCGTCAAGATGTTC-TTTTAT--G-AAACCTTATTTCTCGAAAGTTGCTCAGGAA-AAA----AA-AAGAAAACC-T-GGCA-A-A-ACTCATCTGATATAATACATTT-CAATCGGTCATA--TTGTC-A-AAG-TT-ATC--AAT--A---T-AAGTTTTATTAGA-AAAGAAA--------TCATCCAACATCTACTCATTACCA---AG---CAATGTATAT-TTTTCGACG-TCAAATGATTCATTTCA-AAACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---GTTCACT-ATAACCA-TTTGGT-------------AATCGACGATAC--TTTAAAGTTATTTTAATAAGCTTATTTTGA-TAAA
gi|110908 : TATTGATATT------AAAA-TGATTTGTTTCAGTATATCTAAACTTTGAATTACTAAAGGTAAGAAGAAATAATTTGTCCAATTAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAACGCGTTCCTTTT-T--T-AAACCTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-GA-A-A-A-ACTCATTTAATATAATACATTTGTAATCGGTCATA--T-AGC-ACA-A-TT-ACT--TAT--AAATT-AAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTCGTCATTTCCG---AG---CATTGTATTTGTTTTCGGCA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110909 : TATTGATATT------TAAA-TGATTTATTTCATTATATCTAAACTTTGAATTACTAA-GGTTAGAAGAAATAGTTCGTCCAATAAAATGTTTA---------AAATCG---------------AAC-AA--TATTGACAA--AATGTGCGGTTTT-ATACTCAATGCGTTC-CTTT-T--T-TAATTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAAGAAAAAC-T-GACG-A-A-ACTCATTTGATATAATACATTTGCAATCGGTCGTA---TAGC-ACA-G-TT-ACC--AAT--AAATT-GAGTTTTATTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATG--CAT-TTGTCTGCGATCGTCTGGTT
gi|110910 : T------TAGG-TGGTTTGTTTCATAATACCTAAACTTCAAATTGGTAAAGGTAAAAAGAAATATTTCGTCCATTAAAATGTTAA---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATGAAA-CC-C-AACA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-AAG-TT-ACC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAA
gi|110911 : TTAGA-AAAGAAA--------TCATCCACAATTTACTCATTTCCG---AG---CAATAAATAT-CTTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCATGAAAGATATCAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATACTATATTCTCAATCGGCGACAC-TTTTAAAGTTATCTTAATAAGCTAAGTTGGA-TAAA
gi|110911 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCATGAAAGATA-TCAAAAATACC----AATATGAATTCC-T-CACA-ATA-AC-CATTTGGTATACTATATTCTCAATCGGCGACAC-TTTTA-A-A-G-TT-ATCTTAAT--AAGCT-AAGTTGGAT---A-AATG--A--------TCCTCCAAAAGGGATCCATTTCCGGAAAT---CAACATATtgatcctccaaaagggatccatttccggaaatcaacatat
gi|110912 : ttagaaaagaaatcatccacaatttactcatttccgagcaataaatatcCC--AAT--A---T-AATTTTTACCAGA-AAACAAA--------TCATCCAAAACTTACAAATTTCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACATTAATTCTAGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTTACA-ATAGCCA-TTTGGTATACTATATTTTCAATCACTGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110913 : CC--AAT--A---T-AATTTTTACCAGA-AAAGAAA--------TCATCCAAAATTTACTAATATCCG---AG---CAATGTATAT-TTTTCGGCG-TCAAATGGTTCTTTTCA-AAACCTTAATTCTAGAAAGATATCAA----AA---AT-ACCAATATG-ATT---CTTTACA-CAAACCA-TTTGGTATACTATATTTTCAATCACCGATAC-TTTAAAATTTATCTAAATAAGCTTAATTTGA-CAAAtgttcctccaaaatgaatccatttccgaaaataaacattt
gi|110913 : CCAATATAATTTTTACCAGAAAAGAAATC--ATCCAAAAT---TTACT-AA--TATC--CGAGCAATGTATATTTTTCGGCGTCAAATGGTTC-TTTT-C--A-AAACCTTAATTCTAGAAAGATA-TCAAAAATACC----AATATGATT-CT-T-TACACA-A-AC-CATTTGGTATACTATATTTTCAATCACCGATA--CTTTA-A-A-ATTT-ATC--TAA--A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTATCCATTTCCG---AA----AATAAACA---TTTCGTCG--CATTTGTTTCTTCGCATGCACC---GTTCA-GAAAGATCTAGACCCTAA---ATAAACAATGTTCATTACCTTTCAGA-ATTGCAAGTTTAATATATCATtgttcctccaaaatgtatccatttccgaaaataaacatttcgtcgcatttgtttcttcgcatgcaccgttcagaaagatctagaccctaaataaacaatgttcattacctttcagaattgcaagtttaatatatcat
gi|110914 : AAA--------TCGTCCAAAATTTAATAATTTCCG---AG---CAAAGTATAT-CTTTCGGCG-TCATATGGTTCTTTTCA-AAACCTTAATTCTTGAAAGTTATCAA----AA----T-ACCAATATGAATT---CTTTGCA-ATAACAA-TTTGGTTTACTATATTTTCAATCACCGATAC-TTTTAAAGTTATCTTAATAAGCTTAATTTGA-CAAA
gi|110915 : AAA--------TCATCCACAATTTACTAATTTTCA---AG---CAATGTATAT-TTTTCGG---TCAAATGGGTCTTTT-A-AAACCTTAATTCACGTAAGATATCAA----AG---AT-ACCAATATGAATT---CTTCACA-GTTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TGTTAAAGTTATCTTAATTAGCTTAAATTGATCAAAtcttcctccaaaatgtatccatttccgaaaataaacattt
gi|110916 : ---CAATGTATAT-TTTTCGGCG-TCAAATTGTTTTTTTCA-AAACCTTTATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---TCTCACA-ATAACCA-TTTAG--TACTATATTTTCAATCGTCGATAC-TTTTAAAGTTATCTTCATAAGCTTttttaatgttcctccaaaatgtatacatttccgaaaattaacattt
gi|110917 : caAATGTATAT-TTTCTCGCA-TCCAATGGTTCTTTTCA-ACACCTTAATTCACGAAAGATATAAA----AA---AT-ACCAATATGAATT---CTTCACA-ATAACCA-TTTGGTATACAATATTTTCACTCGCCAATAC-TTTTAAAGTAATCTTGATAAGTTTTAATTGA-TAAA
gi|110918 : AATGTATAT-TTTTCGGCC-TCAAATGGTTCTTTTCA-AAATCTTAATTCACGAAAGATATCAA----AA---AT-ACCAACATGAATT---CCTCAAATACAATCA-TTTGGTATTCAATATTTTCAATCGACGATAC-GTTTAAAGTTATCCTAATAAGCTTAAATTGA-TAAAaaaattaatgttccaccaaaatgtatccatttccaa
gi|110919 : TTTCGCCG-TCAAATGGTTCATTTCA-AAATCTTAATTCACGAAAGATATCAA----AT---AT-ACCAATATGAATT---CCTCACA-ATAACCA-TTTGGTATATTATATTTTCAATCGGCGATACTTTTTTAAGTTATTTTAATAAGCTTAGTTTGA-TAAAggttcctccaaaattt
gi|110919 : TTTC-GCCGTCAAATGGTTC-ATTT-C--A-AAATCTTAATTCACGAAAGATA-TCAAATATACC----AATATGAATTCC-T-CACA-ATA-AC-CATTTGGTATATTATATTTTCAATCGGCGATACTTTTTT-A-A-G-TT-ATT--TTA--A---T-AAGCTTAGTTTGA-TAAATGT--------TCCTCCAAAACGGATCCATTTCCG---AAAATCAACATATtgttcctccaaaacggatccatttccgaaaatcaacatat
gi|110920 : CG-TCAAATGGTTCTTTTCA-AAACCTTGATTCTAGAAAGATATCAA----AA---AT-ACCAATATGAATC---CTTTACA-ATTACCA-TTTGGTATACTATATTTTCAATCGCCGATAC-TTTTAAAATTAACTTAATAAGCTTAATTTGA-CAAA
gi|110920 : CGTCAAATGGTTC-TTTT-C--A-AAACCTTGATTCTAGAAAGATA-TCAAAAATACC----AATATGAATCCT-T-TACA-A-TTAC-CATTTGGTATACTATATTTTCAATCGCCGATAC-TTTTA-A-A-A-TTAACT--TA---A---T-AAGCTTAATTTGA-CAAATGT--------TCCTCCAAAATGTAACAATTTCCG---AA----AATAAACAT-TTtgttcctccaaaatgtaacaatttccgaaaataaacattt
gi|110921 : CA-TCAAATGGTTCTTTTCA-AAACCTTAATTTACGAAAGATATAAA----AAAAAAT-ACCAATATGAACT---CTTCACA-ATAACCA-TTTGGTATACTATATTTTCAATAGCCGATAC-TTTTAAAGTTATCTTAATCAGCTTAAATTGA-TAAA
gi|110921 : CATCAAATGGTTC-TTTT-C--A-AAACCTTAATTTACGAAAGATA-TAAAAAA-AAATACCAATATGAACTCT-T-CACA-ATA-AC-CATTTGGTATACTATATTTTCAATAGCCGATAC-TTTTA-A-A-G-TT-ATC--TTA--A---T-CAGCTTAAATTGATAAAAAAATTTAATGTTCCTCCAAAATGTATCCATTTCCG---AA----AATCAACAT-TT--------TCAATTGTTTCT----A-CAATGTTAATTaaaatttaatgttcctccaaaatgtatccatttccgaaaatcaacattttcaattgtttctacaatgttaatt
gi|110922 : A---------AAATCGCATTTAAAATCG-TTAA---A--TATTGACAA--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCAT-T--G-AAACCTTAATTCTTGGAAGATACTCAAGAA-AGA----AACATG-AAACC-C-AACA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AATTT
gi|110923 : a--AATGTGCGGTTTT-ATCGTCAATGGGTTC-TTTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACCTT-GAAA-A-A-ACTCATTTGATATAATACATTTTCAATCGATCATA--TTCTC-A-A-G-TT-ACC--AAT--A---T-AATTT
gi|110924 : --AATGTGCGGTTTT-ATCGTCAATGGGTTC-TCTT-T--G-AAACCTTAATTCTTGAAAGATACTCAAGAA-AGA----AACATGAAAACC-T-GGAA-A-A-ACTCATTCAATATAATACATTTTCAATCGATCATA--TTCTCAA-A-G-TT-ACC--AAT--A---T-AAGTTT
gi|110925 : G-TCAAATTATTCATTTCA-AAATCTTAATTCACGAAATATATAAA----AA---AT-ACCAATATGAATT---CCTCACA-ATAATCA-TTTGGTTTACTATATTTTCAATCGGCGATAC--------GT----TTAATAAGCTTAGTTTGA-CAAA
gi|110926 : AATGCGTTC-TTTT-TT-G-AAACTTTAATTCTCGAAAGATACTCAAGAA-AGA----AACAATAAAAAC-T-GACA-A-A-ACTCATTTGATATAATACATTTTCAATCGGTCATA--TTGTCAA-A-G-TT-ACC--AAT--ACATT-AAGTTTTATTAGA-AAA
gi|110927 : GTTC-TTTT-TT-G-AAACCTTAATTCTCGAAAGTTTCTCAAGAA-AGA----AACAAGAACACC-T-AGCA-A-A-ACTCATTTGATATAATACATTTTCAATCGGCCATA--TTTTCAA-A-G-TT-ATC--AAT--A---T-AAGTTTTAT