lowQualScore : 11 111111
lowQualScore : 22 7 0 1 55555555 55 1 000000
lowQualScore : .. . . . ........ .. . ......
lowQualScore : 00 6 6 4 00000000 66 4 333333
consensus : TATCAGGTGATGAAAATA--AATATTGATTTTGAGAC-AA--------AATCTATGTCGATATTCGGATAT-C-TCGA-----NTTTTTTT
Reference ( gi|37271 ) : TATCAGGTGATGAAAATA--AATATCGATCTTGAGAC-AA--------AATCTATGTCGATATTCGGATAA-C-TCGA-----TTTTTTTT
gi|37270 : TATCAGGTAATGAAAATA--AATATTGATTTTGATAC-AA--------AATCTATGTCGATATTCGGATAT-C-TCGA-----GTTTTTTT
gi|37273 : TATCCGGTGATAAAAATA--AATATTAATCTTGAGAC-AA--------AATCTATGTCGATATTCGGATAT-C-TCAA-----GTTTTTTT
gi|37276 : TATCATGTGATGAAAATA--AGTATTGATCTTGAGGC-AA--------AATCTATGTTGATATTCGGATAT-C-TCAA-----TGTTTTTT
gi|37275 : TATCAGGTGATGAAAATA--TATATTTATTTTGAGAA-AA--------AATCTATGTCGATATTCGGATAT-C-TCGA-----TGTTTTT
gi|37272 : TATCAGGTGATGAAAATA--AATATTGATTTCGAGAC-AA--------AACCTATGTCGATATTCGGATAT-A-TCGA-----GTGTTTT
gi|37274 : TAGCAGGTGATGAAAACA--AATATTGATTTTGAGAC-AA--------AATCTATGTCGATATTCAG-TAATC-TCGA-----GTTTTTTT
gi|37278 : TATCTGGTGACGAAAATA--AATATTGATTTTGAGAC-AA--------AATCTATGTTGATATTCAAATAT-C-TCCA-----TTTTTTTT
gi|37281 : TATCAGGTGATGAAAATA--AAAACTGATCTTGAGAC-AA--------AATCTATGACGATATTTTGATAT-C-TCAA-----TGTTTTTT
gi|37279 : TATCAGGTGATAAAAATATAAATATTGATCTTGAGAC-AA--------AATCTATGTTGATACTTGGATAT-C-TTAA-----GTTTTTTT
gi|37277 : TATTAGGTGATGAATATA--AATGCTGATTTTGAGAC-AA--------AATCTATGTCGATATTCGGATAT-T-TCGAGG---TTATTTT
gi|37282 : TACCAGGAGATGAAAATA--AATATGGATCTTGATACAAA--------AATCTATGTCGATATTCGGATAT-T-TCGA-----
gi|37284 : TATCAGGTGATGGAAATA--AATGTTTATCTTGAGAC-AA--------AATCTATTTCGATATAAGGATAC-C-TCGA-----TGTT
gi|37280 : TATCAGGTGATGAAAATA--ATTATTGATTTTGAGAC-GA--------AATC--TGTCGATATTTGGATAT-C-TTGAGGGGCTTTTTTT
gi|37285 : TATCAGGTCATGAAAATA--TATATTGATCTTGAGAC-AA--------AATCTATGTCAATATACAGA-AA-TATTGA-----TATTTTCT
gi|37286 : TATCAGGTGATGAAAATA--GATATTTATC-TGAGAC-AAAATCAGTTAATCTATGTCAATATTTTGATAT-C-TCAA-----TATTTTTT
gi|37287 : TATAAGATGATGAAAATA--ATTTTTTATCTTGAAAC-GA--------AATCTATGTCGATATTCTGGTAT-C-TCTC-----TGTTTTTT
gi|37288 : TATCAGGT---------A--AATATTGATCTTGAGAC-AA--------AATCTATGTCAATATTTGGGTAA-T----G-----TTTTTTt
gi|37283 : TATCAGGTGACGAAAATA--AATAT--------------A--------AATCTGTGTTGATATTCGGATAT-C-TCGAGG---TTTTTT
gi|37289 : TATCAGGTGATGAAAATA--AATATAGATTTTGA------------------------GATATTCGGATAT-C-TTG
gi|37290 : TATCAAGTGATGAA---------------TTTGAGAC-AA--------AATCTATGTCGATATTC
gi|37291 : ATCAAGTGATAAAAATG--AATATTGATCTTGAGAG-AA--------AATC--TGTCGATATTCTGATAT-C-TTGA-----TGTTTTTTttaagttttttt
gi|37292 : CAGGTGATGAAAATA--AATATTGATTTTGAGAC-AA--------AATCTATGTCGATATTCAGATAT-C-TAGA-----GTTTTTT
gi|37293 : CAGGTGATGAAAATA--AATATTGATTTTGAAAC-AA--------AATCTATGTCGATATTCGGATAT-C-CAGA-----GTTTTTTT
gi|37294 : CAGTTGATGAAAATG--AATATTGATTTTGAGAC-AA--------CATCTTTGTCGATATTCGGATAT-C-TCGA-----GTTTTTTT
gi|37296 : CAGTTGATGAAAATA--AATATTAATTTTTAGAC-AA--------AATCTATGTCGATATTCGGATAT-C-TGGA-----GTTTTTTT
gi|37295 : CAGGTGATGAAAATA--AATATTGATTTTGAGAC-AA--------AATCTATTTCGAAATTCGGATAT-C-TCCA-----GTTCTTTT
gi|37297 : CAGGTGATGAAAATA--AATATTGATTTTGGGAC-AA--------AATATATGTTTATATTCGGATAT-A-TCGA-----GTTTTTTT
gi|37298 : AGGTGATGAAAATA--AATATTGATTTTGAGAC-AA--------AATCTATGTCGATATT-GGATAT-C-TTGA-----GTTTTTTT
gi|37299 : ATCAATAATGAGAT-AA--------AATATATGTCGATATTCAGATAT-C-TCGA-----
Alignments
lowQualScore : 11 2222 555555555 44444444 1 555555 1
lowQualScore : .. .... ......... ........ . ...... .
lowQualScore : 88 8888 333333333 88888888 3 444444 4
consensus : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA----GTTT-TTTT
Reference ( family-647 ) : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA----NTTT-TTTT
gi|37270 : TATCAGGTAATGAAAATA--AATAT----TGATTT---------TGATACAA--------AA-TCTATGTCGATATTCGGATATCTCGA----GTTT-TTTT
gi|37271 : TATCAGGTGATGAAAATA--AATAT----CGATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATAACTCGA----TTTT-TTTT
gi|37272 : TATCAGGTGATGAAAATA--AATAT----TGATTT---------CGAGACAA--------AA-CCTATGTCGATATTCGGATATATCGA----GTGT-TTT
gi|37273 : TATCCGGTGATAAAAATA--AATAT----TAATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCAA----GTTT-TTTT
gi|37274 : TAGCAGGTGATGAAAACA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGTAATCTCGA----GTTT-TTTT
gi|37275 : TATCAGGTGATGAAAATA--TATAT----TTATTT---------TGAGAAAA--------AA-TCTATGTCGATATTCGGATATCTCGA----TGTT-TTT
gi|37276 : TATCATGTGATGAAAATA--AGTAT----TGATCT---------TGAGGCAA--------AA-TCTATGTTGATATTCGGATATCTCAA----TGTT-TTTT
gi|37277 : TATTAGGTGATGAATATA--AATGC----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATTTCGA----GGTTATTTT
gi|37278 : TATCTGGTGACGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTTGATATTCAAATATCTCCA----TTTT-TTTT
gi|37279 : TATCAGGTGATAAAAATATAAATAT----TGATCT---------TGAGACAA--------AA-TCTATGTTGATACTTGGATATCTTAA----GTTT-TTTT
gi|37280 : TATCAGGTGATGAAAATA--ATTAT----TGATTT---------TGAGACGA--------AA-TC--TGTCGATATTTGGATATCTTGAGGGGCTTT-TTTT
gi|37281 : TATCAGGTGATGAAAATA--AAAAC----TGATCT---------TGAGACAA--------AA-TCTATGACGATATTTTGATATCTCAA----TGTT-TTTT
gi|37282 : TACCAGGAGATGAAAATA--AATAT----GGATCT---------TGATACAA--------AAATCTATGTCGATATTCGGATATTTCGA----
gi|37283 : TATCAGGTGACGAAAATA--AATAT--------------------------A--------AA-TCTGTGTTGATATTCGGATATCTCGA----GGTT-TTTT
gi|37284 : TATCAGGTGATGGAAATA--AATGT----TTATCT---------TGAGACAA--------AA-TCTATTTCGATATAAGGATACCTCGA----TGTT-
gi|37285 : TATCAGGTCATGAAAATA--TATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATACAGAAATATTGA----TATT-TTCT
gi|37286 : TATCAGGTGATGAAAATA--GATAT----TTA-TC---------TGAGACAAAATCAGTTAA-TCTATGTCAATATTTTGATATCTCAA----TATT-TTTT
gi|37287 : TATAAGATGATGAAAATA--ATTTT----TTATCT---------TGAAACGA--------AA-TCTATGTCGATATTCTGGTATCTCTC----TGTT-TTTT
gi|37288 : TATCAGGT---------A--AATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATTTGGGTA-----A----TGTT-TTTTt
gi|37289 : TATCAGGTGATGAAAATA--AATAT----AGATTT---------TGA------------------------GATATTCGGATATCTTG
gi|37290 : TATCAAGTGATGAA-------------------TT---------TGAGACAA--------AA-TCTATGTCGATAT-------TCTTAA----GTTT-TTTT
gi|37291 : ATCAAGTGATAAAAATG--AATAT----TGATCT---------TGAGAGAA--------AA-TC--TGTCGATATTCTGATATCTTGA----TGTT-TTTT
gi|37292 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGATATCTAGA----GTTT-TTT
gi|37293 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAAACAA--------AA-TCTATGTCGATATTCGGATATCCAGA----GTTT-TTTT
gi|37294 : CAGTTGATGAAAATG--AATAT----TGATTT---------TGAGACAA--------CA-TCTTTGTCGATATTCGGATATCTCGA----GTTT-TTTT
gi|37295 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATTTCGAAATTCGGATATCTCCA----GTTC-TTTT
gi|37296 : CAGTTGATGAAAATA--AATAT----TAATTT---------TTAGACAA--------AA-TCTATGTCGATATTCGGATATCTGGA----GTTT-TTTT
gi|37297 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGGGACAA--------AA-TATATGTTTATATTCGGATATATCGA----GTTT-TTTT
gi|37298 : AGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATT-GGATATCTTGA----GTTT-TTTT
gi|37299 : ATA--AATATCATTTGATTCAATCAATAATGAGATAA--------AA-TATATGTCGATATTCAGATATCTCGA----AATT-
Alignments
lowQualScore : 1
lowQualScore : 11 2222 555555555 44444444 1 2 3333 1
lowQualScore : .. .... ......... ........ . . .... .
lowQualScore : 88 8888 333333333 88888888 3 4 0000 5
consensus : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
Reference ( family-647 ) : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37270 : TATCAGGTAATGAAAATA--AATAT----TGATTT---------TGATACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37271 : TATCAGGTGATGAAAATA--AATAT----CGATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATAACTCGA-T----TTT-TTTT
gi|37272 : TATCAGGTGATGAAAATA--AATAT----TGATTT---------CGAGACAA--------AA-CCTATGTCGATATTCGGATATATCGA-G----TGT-TTT
gi|37273 : TATCCGGTGATAAAAATA--AATAT----TAATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCAA-G----TTT-TTTT
gi|37274 : TAGCAGGTGATGAAAACA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGTAATCTCGA-G----TTT-TTTT
gi|37275 : TATCAGGTGATGAAAATA--TATAT----TTATTT---------TGAGAAAA--------AA-TCTATGTCGATATTCGGATATCTCGATG----TTT-TT
gi|37276 : TATCATGTGATGAAAATA--AGTAT----TGATCT---------TGAGGCAA--------AA-TCTATGTTGATATTCGGATATCTCAATG----TTT-TTT
gi|37277 : TATTAGGTGATGAATATA--AATGC----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATTTCGA-G----GTTATTTT
gi|37278 : TATCTGGTGACGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTTGATATTCAAATATCTCCA-T----TTT-TTTT
gi|37279 : TATCAGGTGATAAAAATATAAATAT----TGATCT---------TGAGACAA--------AA-TCTATGTTGATACTTGGATATCTTAA-G----TTT-TTTT
gi|37280 : TATCAGGTGATGAAAATA--ATTAT----TGATTT---------TGAGACGA--------AA-TC--TGTCGATATTTGGATATCTTGA-GGGGCTTT-TTTT
gi|37281 : TATCAGGTGATGAAAATA--AAAAC----TGATCT---------TGAGACAA--------AA-TCTATGACGATATTTTGATATCTCAATG----TTT-TTT
gi|37282 : TACCAGGAGATGAAAATA--AATAT----GGATCT---------TGATACAA--------AAATCTATGTCGATATTCGGATATTTCGA-
gi|37283 : TATCAGGTGACGAAAATA--AATAT--------------------------A--------AA-TCTGTGTTGATATTCGGATATCTCGA-G----GTT-TTTT
gi|37284 : TATCAGGTGATGGAAATA--AATGT----TTATCT---------TGAGACAA--------AA-TCTATTTCGATATAAGGATACCTCGATG----TT
gi|37285 : TATCAGGTCATGAAAATA--TATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATACAGAAATATTGATA----TTT-TCT
gi|37286 : TATCAGGTGATGAAAATA--GATAT----TTA-TC---------TGAGACAAAATCAGTTAA-TCTATGTCAATATTTTGATATCTCAATA----TTT-TTT
gi|37287 : TATAAGATGATGAAAATA--ATTTT----TTATCT---------TGAAACGA--------AA-TCTATGTCGATATTCTGGTATCTCTCTG----TTT-TTTT
gi|37288 : TATCAGGT---------A--AATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATTTGGGTA-----ATG----TTT-TTT
gi|37289 : TATCAGGTGATGAAAATA--AATAT----AGATTT---------TGA------------------------GATATTCGGATATCTTG
gi|37290 : TATCAAGTGATGAA-------------------TT---------TGAGACAA--------AA-TCTATGTCGATAT-------TCTTAA-G----TTT-TTTT
gi|37291 : ATCAAGTGATAAAAATG--AATAT----TGATCT---------TGAGAGAA--------AA-TC--TGTCGATATTCTGATATCTTGATG----TTT-TTT
gi|37292 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGATATCTAGA-G----TTT-TTT
gi|37293 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAAACAA--------AA-TCTATGTCGATATTCGGATATCCAGA-G----TTT-TTTT
gi|37294 : CAGTTGATGAAAATG--AATAT----TGATTT---------TGAGACAA--------CA-TCTTTGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37295 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATTTCGAAATTCGGATATCTCCA-G----TTC-TTTT
gi|37296 : CAGTTGATGAAAATA--AATAT----TAATTT---------TTAGACAA--------AA-TCTATGTCGATATTCGGATATCTGGA-G----TTT-TTTT
gi|37297 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGGGACAA--------AA-TATATGTTTATATTCGGATATATCGA-G----TTT-TTTT
gi|37298 : AGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATT-GGATATCTTGA-G----TTT-TTTT
gi|37299 : ATA--AATATCATTTGATTCAATCAATAATGAGATAA--------AA-TATATGTCGATATTCAGATATCTCGA-A----ATT-
Alignments
lowQualScore : 1
lowQualScore : 11 2222 555555555 44444444 1 2 3333 1
lowQualScore : .. .... ......... ........ . . .... .
lowQualScore : 88 8888 333333333 88888888 3 4 0000 5
consensus : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
Reference ( family-647 ) : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37270 : TATCAGGTAATGAAAATA--AATAT----TGATTT---------TGATACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37271 : TATCAGGTGATGAAAATA--AATAT----CGATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATAACTCGA-T----TTT-TTTT
gi|37272 : TATCAGGTGATGAAAATA--AATAT----TGATTT---------CGAGACAA--------AA-CCTATGTCGATATTCGGATATATCGA-G----TGT-TTT
gi|37273 : TATCCGGTGATAAAAATA--AATAT----TAATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCAA-G----TTT-TTTT
gi|37274 : TAGCAGGTGATGAAAACA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGTAATCTCGA-G----TTT-TTTT
gi|37275 : TATCAGGTGATGAAAATA--TATAT----TTATTT---------TGAGAAAA--------AA-TCTATGTCGATATTCGGATATCTCGATG----TTT-TT
gi|37276 : TATCATGTGATGAAAATA--AGTAT----TGATCT---------TGAGGCAA--------AA-TCTATGTTGATATTCGGATATCTCAATG----TTT-TTT
gi|37277 : TATTAGGTGATGAATATA--AATGC----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATTTCGA-G----GTTATTTT
gi|37278 : TATCTGGTGACGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTTGATATTCAAATATCTCCA-T----TTT-TTTT
gi|37279 : TATCAGGTGATAAAAATATAAATAT----TGATCT---------TGAGACAA--------AA-TCTATGTTGATACTTGGATATCTTAA-G----TTT-TTTT
gi|37280 : TATCAGGTGATGAAAATA--ATTAT----TGATTT---------TGAGACGA--------AA-TC--TGTCGATATTTGGATATCTTGA-GGGGCTTT-TTTT
gi|37281 : TATCAGGTGATGAAAATA--AAAAC----TGATCT---------TGAGACAA--------AA-TCTATGACGATATTTTGATATCTCAATG----TTT-TTT
gi|37282 : TACCAGGAGATGAAAATA--AATAT----GGATCT---------TGATACAA--------AAATCTATGTCGATATTCGGATATTTCGA-
gi|37283 : TATCAGGTGACGAAAATA--AATAT--------------------------A--------AA-TCTGTGTTGATATTCGGATATCTCGA-G----GTT-TTTT
gi|37284 : TATCAGGTGATGGAAATA--AATGT----TTATCT---------TGAGACAA--------AA-TCTATTTCGATATAAGGATACCTCGATG----TT
gi|37285 : TATCAGGTCATGAAAATA--TATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATACAGAAATATTGATA----TTT-TCT
gi|37286 : TATCAGGTGATGAAAATA--GATAT----TTA-TC---------TGAGACAAAATCAGTTAA-TCTATGTCAATATTTTGATATCTCAATA----TTT-TTT
gi|37287 : TATAAGATGATGAAAATA--ATTTT----TTATCT---------TGAAACGA--------AA-TCTATGTCGATATTCTGGTATCTCTCTG----TTT-TTTT
gi|37288 : TATCAGGT---------A--AATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATTTGGGTA-----ATG----TTT-TTT
gi|37289 : TATCAGGTGATGAAAATA--AATAT----AGATTT---------TGA------------------------GATATTCGGATATCTTG
gi|37290 : TATCAAGTGATGAA-------------------TT---------TGAGACAA--------AA-TCTATGTCGATAT-------TCTTAA-G----TTT-TTTT
gi|37291 : ATCAAGTGATAAAAATG--AATAT----TGATCT---------TGAGAGAA--------AA-TC--TGTCGATATTCTGATATCTTGATG----TTT-TTT
gi|37292 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGATATCTAGA-G----TTT-TTT
gi|37293 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAAACAA--------AA-TCTATGTCGATATTCGGATATCCAGA-G----TTT-TTTT
gi|37294 : CAGTTGATGAAAATG--AATAT----TGATTT---------TGAGACAA--------CA-TCTTTGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37295 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATTTCGAAATTCGGATATCTCCA-G----TTC-TTTT
gi|37296 : CAGTTGATGAAAATA--AATAT----TAATTT---------TTAGACAA--------AA-TCTATGTCGATATTCGGATATCTGGA-G----TTT-TTTT
gi|37297 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGGGACAA--------AA-TATATGTTTATATTCGGATATATCGA-G----TTT-TTTT
gi|37298 : AGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATT-GGATATCTTGA-G----TTT-TTTT
gi|37299 : ATA--AATATCATTTGATTCAATCAATAATGAGATAA--------AA-TATATGTCGATATTCAGATATCTCGA-A----ATT-
blockSeqs : TA CATT AATCAATAA AATCAGTT A T GGGC A
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blockSeqCons :
originalCons : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
finalCons : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
Alignments
lowQualScore : 1
lowQualScore : 11 2222 555555555 44444444 1 2 3333 1
lowQualScore : .. .... ......... ........ . . .... .
lowQualScore : 88 8888 333333333 88888888 3 4 0000 5
consensus : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
Reference ( family-647 ) : TATCAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37270 : TATCAGGTAATGAAAATA--AATAT----TGATTT---------TGATACAA--------AA-TCTATGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37271 : TATCAGGTGATGAAAATA--AATAT----CGATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATAACTCGA-T----TTT-TTTT
gi|37272 : TATCAGGTGATGAAAATA--AATAT----TGATTT---------CGAGACAA--------AA-CCTATGTCGATATTCGGATATATCGA-G----TGT-TTT
gi|37273 : TATCCGGTGATAAAAATA--AATAT----TAATCT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATCTCAA-G----TTT-TTTT
gi|37274 : TAGCAGGTGATGAAAACA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGTAATCTCGA-G----TTT-TTTT
gi|37275 : TATCAGGTGATGAAAATA--TATAT----TTATTT---------TGAGAAAA--------AA-TCTATGTCGATATTCGGATATCTCGATG----TTT-TT
gi|37276 : TATCATGTGATGAAAATA--AGTAT----TGATCT---------TGAGGCAA--------AA-TCTATGTTGATATTCGGATATCTCAATG----TTT-TTT
gi|37277 : TATTAGGTGATGAATATA--AATGC----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCGGATATTTCGA-G----GTTATTTT
gi|37278 : TATCTGGTGACGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTTGATATTCAAATATCTCCA-T----TTT-TTTT
gi|37279 : TATCAGGTGATAAAAATATAAATAT----TGATCT---------TGAGACAA--------AA-TCTATGTTGATACTTGGATATCTTAA-G----TTT-TTTT
gi|37280 : TATCAGGTGATGAAAATA--ATTAT----TGATTT---------TGAGACGA--------AA-TC--TGTCGATATTTGGATATCTTGA-GGGGCTTT-TTTT
gi|37281 : TATCAGGTGATGAAAATA--AAAAC----TGATCT---------TGAGACAA--------AA-TCTATGACGATATTTTGATATCTCAATG----TTT-TTT
gi|37282 : TACCAGGAGATGAAAATA--AATAT----GGATCT---------TGATACAA--------AAATCTATGTCGATATTCGGATATTTCGA-
gi|37283 : TATCAGGTGACGAAAATA--AATAT--------------------------A--------AA-TCTGTGTTGATATTCGGATATCTCGA-G----GTT-TTTT
gi|37284 : TATCAGGTGATGGAAATA--AATGT----TTATCT---------TGAGACAA--------AA-TCTATTTCGATATAAGGATACCTCGATG----TT
gi|37285 : TATCAGGTCATGAAAATA--TATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATACAGAAATATTGATA----TTT-TCT
gi|37286 : TATCAGGTGATGAAAATA--GATAT----TTA-TC---------TGAGACAAAATCAGTTAA-TCTATGTCAATATTTTGATATCTCAATA----TTT-TTT
gi|37287 : TATAAGATGATGAAAATA--ATTTT----TTATCT---------TGAAACGA--------AA-TCTATGTCGATATTCTGGTATCTCTCTG----TTT-TTTT
gi|37288 : TATCAGGT---------A--AATAT----TGATCT---------TGAGACAA--------AA-TCTATGTCAATATTTGGGTA-----ATG----TTT-TTT
gi|37289 : TATCAGGTGATGAAAATA--AATAT----AGATTT---------TGA------------------------GATATTCGGATATCTTG
gi|37290 : TATCAAGTGATGAA-------------------TT---------TGAGACAA--------AA-TCTATGTCGATAT-------TCTTAA-G----TTT-TTTT
gi|37291 : ATCAAGTGATAAAAATG--AATAT----TGATCT---------TGAGAGAA--------AA-TC--TGTCGATATTCTGATATCTTGATG----TTT-TTT
gi|37292 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATTCAGATATCTAGA-G----TTT-TTT
gi|37293 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAAACAA--------AA-TCTATGTCGATATTCGGATATCCAGA-G----TTT-TTTT
gi|37294 : CAGTTGATGAAAATG--AATAT----TGATTT---------TGAGACAA--------CA-TCTTTGTCGATATTCGGATATCTCGA-G----TTT-TTTT
gi|37295 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATTTCGAAATTCGGATATCTCCA-G----TTC-TTTT
gi|37296 : CAGTTGATGAAAATA--AATAT----TAATTT---------TTAGACAA--------AA-TCTATGTCGATATTCGGATATCTGGA-G----TTT-TTTT
gi|37297 : CAGGTGATGAAAATA--AATAT----TGATTT---------TGGGACAA--------AA-TATATGTTTATATTCGGATATATCGA-G----TTT-TTTT
gi|37298 : AGGTGATGAAAATA--AATAT----TGATTT---------TGAGACAA--------AA-TCTATGTCGATATT-GGATATCTTGA-G----TTT-TTTT
gi|37299 : ATA--AATATCATTTGATTCAATCAATAATGAGATAA--------AA-TATATGTCGATATTCAGATATCTCGA-A----ATT-