lowQualScore : 1 111 1
lowQualScore : 22 1 999 3 0 666 22 5 1 1 33333 000 22 3333 1 222 0 4 1 2 77 44444 0 2 4444 22 1 22
lowQualScore : .. . ... . . ... .. . . . ..... ... .. .... . ... . . . . .. ..... . . .... .. . ..
lowQualScore : 00 5 666 6 8 111 33 9 4 5 77777 777 00 3333 5 888 4 8 1 4 33 33333 7 0 3333 44 7 44
consensus : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAAT-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TT-----TTTTAACCTTA---ATAAAA--CA-G--TTTATTTAGTTA
Reference ( gi|103923 ) : CAGGGCTT--TA-CATC--AACACTCATCCGACTGTCCAAAACAACTGAAC-CGTGGCTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCTTAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTCGCAAATCCCCTG--TT-----TTTGAACCTTG---ATAAAA--CA-G--TTTATTTAGTTA
gi|103924 : CAGGGCTT--TA-CATT--AACGCTCATCTGACTGTCCAAGACAACTAAAC-CGTGGGTACGGACAAGT-AAAATATA-ACGCTACTA-----GCCCGGCTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCCC-TTTTTCGCAAATTCCCTG--TT-----TTTTAACCTTG---ATGAAA--CT-G--TTTATTTAGTTA
gi|103930 : CAGGGCTT--AA-CATC--AACGCCCATCCGACTGTCCAAGACAACTGAAC-TGTGGGTAAGGTCAAGT-AAAATAAA-AGGCTGCTC-----GCCCA-TTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TT-----TTTTAACCTTG---ATAAAA--CA-G--ATTATTTAGTTA
gi|103931 : CAGGGCTT--TA-CGTT--AACGCTCATCCGACAGTCGCAGACAACTGATC-CGTGGGTACGGACAAGT-TAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--GAAATTCAGA----AAT-GA---AACATGGCAGATC-TTTTTCGCAAATACCCTG--TT-----TTTTAACCTTG---ATAAAA--CA-G--TTTATTTATTTA
gi|103927 : CAGGGCTT--TA-CATT--AACGCTCACCTGGCTGTCCTGGAGAAATGAAT-CATGGGTACGAACAAAT-AAAATATA-AAGCTGCTA-----GCCTGACTGTACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATTCCCTG--TT-----TTTGAACTTTA---ATAAAA--CA-G--TTTATTGAGTTA
gi|103937 : CAGGGCTT--TA-CATT--AACGCCCATCCGACTGTCCGAAACAACTGAAC-TGTGAGTACAGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTTGACAAGTA--AATATTCAGA----AAT-TA---AACACGGCATCTC-TATTTCGCAAATCCC--G--TT-----TTT-AACCTTG---ATAAAA---A-A--TTTAATTAtt
gi|103925 : CAGGGCTT--TA-CATTGTAACGCTCGCCTGACTGTCTGGGACAACTGAAT-CATGGGTACGGACAAGT-AAAATATA-AAGCTGTTA-----GCCCAACTGGACAAGTG--GAAATTCAGA----AAT-TA---AACACGGCATCTCTTTTTTTGCACATCTCCTGT-TT-----TTTTAATTTTA---ATGTAA--CA-G--TTTATTTAGTT
gi|103926 : CACGGCTT--TA-CATT--AACGCTCGCCCATCTGTCCGGGACAACTGAAT-CCTGGGTATGGACAAGT-AAAATATA-AAGGTGCTA-----GCCCAACTGGAAAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTT-GTTTTTGCAAATCCCCTG--TT-----TTCGATCCTTA---ATAAAA--CAGG--TTTAATTAgtt
gi|103936 : CATGGTTT--TA-CATT--AACGCTTATCCGACTGTCCAGGACAACTGAAT-CGTGGGTACTGACAAGT-ACAATGTA-AGGCTGCTA-----GTCCAACTGGACATATA--AAAATTCAGA----AAT-TA---AACTCGGCATCTC-TTTTTCGCAAAACCCCTGTTTT-----TTTTAACTTTA---ATAAAA--CA-G--CTAATTTtt
gi|103940 : CAGAGCTT--TA-TATC--A-------TCCGACTGTCCAAGACAACTGAAC-CGCGGGTATGGACAAGT-AAAATATA-AGGCTGCCA-----GCACGACTGGAC-ATTG--AAAATTCGTT----AAT-TA---AACACGGCGTCTT-TTTTTCAAAAATCCCCTG--TT-----TTT-AACCTTG---ATAAAA--CA-A--TTTATTCAGCTA
gi|103934 : CAGGGCTT--TA-CTTT--AACGCTCATCCAGTTGTCTGGGACAATTGAAT-CATGGGTACAGACAAGT-AAAACGTG-AGGCTGCTT-----GCCCGACTAGACAAGTG--AAAATTCAGA----AAT-TA---AACACAGCATCAC-TTTTTTGCACATCCCCTC--TT-----TTATAACTTTA---ATAAAA--CA-G--TTTATTTAGTT
gi|103933 : CATGGCTTATTAACAAT--AACGCTCACCCGACTGTCCTGGACTACTGAAT-AGTGGGTATGAACAAGT-AAACTATA-AAGCTGCTA-----GCCCAACTGGACAAGTG--AAAATTCAGA----TAT-TA---AATACAGCATCTC-TTTTTTGCATATCCCCTG--TT-----TTTGAACTTTA---ACAAGA--CA-G--TTTATTAAGTTAttt
gi|103932 : CAGGGTTT--TA-CATT--AACGCTCGCCTGACTGTCCAGGA-AACTGAAT-CCTGGGTATGGACAAGT-AAAATAAA-AAATGGCTA-----GCCCGATTGAACAAGTG--AGAATTCAGA----AAT-TA---AACATGGAATATC-TTTTTTGCATTTCCCCTG--TT-----TTTGAACTTTA---ATTAAA--CA-G--TTTATTTAGTTAtt
gi|103938 : CAGGACTT--TA-CATT--AACACTCATCCGACTGTCCAAGACAACTGAAC-CGTGAGTACGGACAAAC-AAACAATA-AGGCTGCTA-----GCCCGACTGGA--------------CAGA----AAT-TA---AACACGGAATCTC-TTTTTCGCAAATCCCCTG--TT-----ATTTATCCTTG---ATAAAA--C-------TATTTAATTAtt
gi|103929 : CAGGGCTT--TA-CATA--AATGCTCGCCTGACTGTCTGGGACAACTGAAT-CGTGGGTACGGACAAGT-AAAATATA-AAGCTGCTG-----TCCCAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCAA------------------------TTTA---ATAAAA--CA-G--TTTGTTTAGTTAtt
gi|103935 : CAGGGCTT--TA-CATT--AAAGCTCGCCCATCTGTCCGGGACAATTAAAT-CTTGGGTCTGGACAGGTTACAATGTA-AGACTGCCATGCCAGCCCAACTGGACAAGCG--AAAATTCAAA----AAT-TA---AACACAGCATCTC-TTTTTTGCACATCCCCTG--TT-----TTT-AACTTTA---ATAAAA--CA-A--TTTATTTAGTTAtt
gi|103942 : CAGGGCTT--TA-CATT--AACGCTCATCCAACTGTCGAAGACAACTGAAC-TTGGGGTATGGACTAGT-AAAATATA-AGGCTGTTA-----GCCTGACTGGACAAGTA--AATATTCAGA----AAT-TA---AACAAAGCATCTC-TTTTTCAC---------------------------------ATAAAA--CA-G--TTTATTTAATTAtt
gi|103939 : CAGGG-TT--AA-CATT--AAAGCTTG-ACGACTGTTCGGGACAACTGAAT-CTTGGGTAAGGACAAAT-AAGTTATA-AGGCTGCTA-----G----ACTGGAGAAGTG--AAATTTCAGA----GAT-TA---AACATCACATCTCTTTTTTTGTACATCATCTG--TT-----CTTTAACTTTG---ATAAAA--CA-G--TTTATTTAGTTA
gi|103941 : CAGGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCAGGACAAATTAAT-CATGTGTACGGTCAAGT-AAAACATA-AGGCTTCTA-----GCCTGACTGGACAAGTG--AAAATTAAGAAATTAAT-TA---AACACAGCAGCTC-TTT------AAT-------------------------------AGAA--CA-G--TTTATTTAGTTAtt
gi|103943 : CAAGGCTT--TA-CATA--AACACTCATCCCATTGTCCAAGACAACTGAAC-CGTGGGTACGGACAAGT-AAACTATtt
gi|103928 : CAGGACTT--TA-TATT--AATGCTTGCCTGACTGTCCTGGATAACTGAAT-CCTGGGTATGGACA
gi|103944 : CAGGGCTC--AA-CATT--AACACATGTCCGATTGTCAGAGACAAGTATAT-ATCGGGTATGGGCAAGG-GAAATATA-AAGCTGCTA-----GTCCTACAGGATAATTT---AAATTTGAA----AAT-Ttatgggaaaattcagaaatatattcaacactacatctgtttttgtatatcccctgtttttgaattcaataaaacagtttatttagttatt
gi|103945 : AGAGCTT--TA-TATT--AACGCTAATGTGACTGTCCAAGACAACTGAAC-CGTGGGTACGGACACGT-AAAATATA-AGGCTGCTA-----GCCCGAATGGACAAGT---AAAATTTTGA----TAT-TA---AACACGGCATCTC-TTTTTCGCAAATCTCCTGT-TT-----TTTTAACCTTA---ATAAAA--CA-G--TTTATTTAGTCA
gi|103946 : AGGGCTT--TA-AATT--AACGCTTGCCCGACTGTCCGAGAAAACTGAAT-CGTGGGTATTGACAAGT-AAAATACACAGG-TGGTA-----GCCCGACTGGACAAGTG--AAAATTC
gi|103947 : GGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCGGGACAGCGGAAT-CATGGGTACAGACAAGT-AAAATATA-AAGCTTCTA-----GCCCAAGTGGACTAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATCCCCTG--TT-----TCTGAACTTTA---ATAAAA--CA-G--TTTAATTAGTTA
gi|103948 : GGGCTT--TA-CATTTAAACACTCGCCCGACTGTCCGGA-CAACTGAAT-CGTGGGTACA-ACAAGT-AAAATATA-AGGCTGCTA-----GCTCAACTGGACAAGTG--AAAATTCAGA----AAC-TA---AACACGACATCTC-TTTTTTGTACATCTTCTGT-TT-----TTTTTACTTTA---ATAAAA--CA-G--TTTATTTAGTTAtt
gi|103949 : GGGCTT--TA-CAAT--AACGCTTGCCTGACTATCCGGGACAAATGAAT-CATGGGTTCGGACAAGT-AAAACATA-AGGCTTCTA-----GTCCAACTGGACAAGTG--AAAATT--------AAT-TA---AATATGCCATATC-TTTtt
gi|103950 : GGCTT--TA-GATT--AATACTTGCCTGACTGTCTGGGACAACTGAAT-TGTGGGTATGGACAAGT-AAAATATA-AATCTGCTA-----GCCTGACTGGACAAGTG--TAAATTCAGA----ATT-TA---AATACGGCATTTCTTTTTTCACAAATCCCCTG--Taataaaatagaatatttagttatt
gi|103951 : CTCACCTGACTGTCCAGAACAACTGAATTCGGGG-TACAGACAAGT-AAAATATA-AAGCTGCTT-----GCCTGACTGGACAAGTG--AAG--TCAGA----AAT-TT---AACATGGCATCCC-TTTTTTGCAAGTCCCCCG--TCTCATATTCG---CTTGTTTTTAAAACTCA-GACTTTTTTTAGTTcacatatttatgtgtttttaaaaca
gi|103952 : tttatgGTGGGTAAGGGCAAGT-GAAGTATA-GAGCTGCTA-----ttt
gi|103928 : aatgctctcacgatacctgggacatgtaaggaTGGACATATGGGAAAATTCAGA----AATATATTCAACACTACATCTG-TTTTT-GTATATCCCCTG--TT-----TTTGAAT-TCA---ATAAAA--CA-G--TTTATTTAGTTA
Alignments
lowQualScore : 22 1 33 1 1 1 1 33333 22 3333 1 222 4 0 2 77 1 555555 22 1 22
lowQualScore : .. . .. . . . . ..... .. .... . ... . . . .. . ...... .. . ..
lowQualScore : 00 4 77 3 3 4 4 66666 00 1111 5 777 6 7 0 00 0 777777 33 7 33
consensus : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
Reference ( family-644 ) : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
gi|103923 : CAGGGCTT--TA-CATC--AACACTCATCCGACTGTCCAAAACAACTGAA-C-CGTGGCTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCTTAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTGAACC-----TTGATAAAA--CA-G--TTTATTTAGTTA
gi|103924 : CAGGGCTT--TA-CATT--AACGCTCATCTGACTGTCCAAGACAACTAAA-C-CGTGGGTACGGACAAGT-AAAATATA-ACGCTACTA-----GCCCGGCTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCCC-TTTTTCGCAAATTCCCTG--TTTTTTAACC-----TTGATGAAA--CT-G--TTTATTTAGTTA
gi|103925 : CAGGGCTT--TA-CATTGTAACGCTCGCCTGACTGTCTGGGACAACTGAA-T-CATGGGTACGGACAAGT-AAAATATA-AAGCTGTTA-----GCCCAACTGGACAAGTG--GAAATTCAGA----AAT-TA---AACACGGCATCTCTTTTTTTGCACATCTCCTGT-TTTTTTAATT-----TTAATGTAA--CA-G--TTTATTTAGTT
gi|103926 : CACGGCTT--TA-CATT--AACGCTCGCCCATCTGTCCGGGACAACTGAA-T-CCTGGGTATGGACAAGT-AAAATATA-AAGGTGCTA-----GCCCAACTGGAAAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTT-GTTTTTGCAAATCCCCTG--TTTTCGATCC-----TTAATAAAA--CAGG--TTTAATTAgtt
gi|103927 : CAGGGCTT--TA-CATT--AACGCTCACCTGGCTGTCCTGGAGAAATGAA-T-CATGGGTACGAACAAAT-AAAATATA-AAGCTGCTA-----GCCTGACTGTACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATTCCCTG--TTTTTGAACT-----TTAATAAAA--CA-G--TTTATTGAGTTAtt
gi|103928 : CAGGACTT--TA-TATT--AATGCTTGCCTGACTGTCCTGGATAACTGAA-T-CCTGGGTATGGACAtt
gi|103928 : TGGACATATGGGAAAATTCAGA----AATATATTCAACACTACATCTG-TTTTT-GTATATCCCCTG--TTTTTGAAT------TCAATAAAA--CA-G--TTTATTTAGTTAtatgggaaaattcagaaatatattcaacactacatctgtttttgtatatcccctgtttttgaattcaataaaacagtttatttagttatt
gi|103929 : caggactttatattaatgcttgcctgactgtcctggataactgaatcctgggtaCAGGGCTT--TA-CATA--AATGCTCGCCTGACTGTCTGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AAGCTGCTG-----TCCCAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCAA-------------------T-----TTAATAAAA--CA-G--TTTGTTTAGTTAtt
gi|103930 : CAGGGCTT--AA-CATC--AACGCCCATCCGACTGTCCAAGACAACTGAA-C-TGTGGGTAAGGTCAAGT-AAAATAAA-AGGCTGCTC-----GCCC-ATTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTGATAAAA--CA-G--ATTATTTAGTTAtt
gi|103931 : CAGGGCTT--TA-CGTT--AACGCTCATCCGACAGTCGCAGACAACTGAT-C-CGTGGGTACGGACAAGT-TAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--GAAATTCAGA----AAT-GA---AACATGGCAGATC-TTTTTCGCAAATACCCTG--TTTTTTAACC-----TTGATAAAA--CA-G--TTTATTTATTTA
gi|103932 : CAGGGTTT--TA-CATT--AACGCTCGCCTGACTGTCCAGGA-AACTGAA-T-CCTGGGTATGGACAAGT-AAAATAAA-AAATGGCTA-----GCCCGATTGAACAAGTG--AGAATTCAGA----AAT-TA---AACATGGAATATC-TTTTTTGCATTTCCCCTG--TTTTTGAACT-----TTAATTAAA--CA-G--TTTATTTAGTTA
gi|103933 : CATGGCTTATTAACAAT--AACGCTCACCCGACTGTCCTGGACTACTGAA-T-AGTGGGTATGAACAAGT-AAACTATA-AAGCTGCTA-----GCCCAACTGGACAAGTG--AAAATTCAGA----TAT-TA---AATACAGCATCTC-TTTTTTGCATATCCCCTG--TTTTTGAACT-----TTAACAAGA--CA-G--TTTATTAAGTTAtt
gi|103934 : CAGGGCTT--TA-CTTT--AACGCTCATCCAGTTGTCTGGGACAATTGAA-T-CATGGGTACAGACAAGT-AAAACGTG-AGGCTGCTT-----GCCCGACTAGACAAGTG--AAAATTCAGA----AAT-TA---AACACAGCATCAC-TTTTTTGCACATCCCCTC--TTTTATAACT-----TTAATAAAA--CA-G--TTTATTTAGTTtt
gi|103935 : CAGGGCTT--TA-CATT--AAAGCTCGCCCATCTGTCCGGGACAATTAAA-T-CTTGGGTCTGGACAGGTTACAATGTA-AGACTGCCATGCCAGCCCAACTGGACAAGCG--AAAATTCAAA----AAT-TA---AACACAGCATCTC-TTTTTTGCACATCCCCTG---TTTTTAACT-----TTAATAAAA--CA-A--TTTATTTAGTTAttt
gi|103936 : CATGGTTT--TA-CATT--AACGCTTATCCGACTGTCCAGGACAACTGAA-T-CGTGGGTACTGACAAGT-ACAATGTA-AGGCTGCTA-----GTCCAACTGGACATATA--AAAATTCAGA----AAT-TA---AACTCGGCATCTC-TTTTTCGCAAAACCCCTGTTTTTTTTAACT-----TTAATAAAA--CA-G--CTAATTTtt
gi|103937 : CAGGGCTT--TA-CATT--AACGCCCATCCGACTGTCCGAAACAACTGAA-C-TGTGAGTACAGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTTGACAAGTA--AATATTCAGA----AAT-TA---AACACGGCATCTC-TATTTCGCAAATCCC--G---TTTTTAACC-----TTGATAAAA---A-A--TTTAATTA
gi|103938 : CAGGACTT--TA-CATT--AACACTCATCCGACTGTCCAAGACAACTGAA-C-CGTGAGTACGGACAAAC-AAACAATA-AGGCTGCTA-----GCCCGACTGGA--------------CAGA----AAT-TA---AACACGGAATCTC-TTTTTCGCAAATCCCCTG--TTATTTATCC-----TTGATAAAA--C-------TATTTAATTA
gi|103939 : CAGGG-TT--AA-CATT--AAAGCTTGAC-GACTGTTCGGGACAACTGAA-T-CTTGGGTAAGGACAAAT-AAGTTATA-AGGCTGCTA---------GACTGGAGAAGTG--AAATTTCAGA----GAT-TA---AACATCACATCTCTTTTTTTGTACATCATCTG--TTCTTTAACT-----TTGATAAAA--CA-G--TTTATTTAGTTAtt
gi|103940 : CAGAGCTT--TA-TAT---------CATCCGACTGTCCAAGACAACTGAA-C-CGCGGGTATGGACAAGT-AAAATATA-AGGCTGCCA-----GCACGACTGGAC-ATTG--AAAATTCGTT----AAT-TA---AACACGGCGTCTT-TTTTTCAAAAATCCCCTG---TTTTTAACC-----TTGATAAAA--CA-A--TTTATTCAGCTAtt
gi|103941 : CAGGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCAGGACAAATTAA-T-CATGTGTACGGTCAAGT-AAAACATA-AGGCTTCTA-----GCCTGACTGGACAAGTG--AAAATTAAGAAATTAAT-TA---AACACAGCAGCTC-TTT------AAT----------------------------AGAA--CA-G--TTTATTTAGTTA
gi|103942 : CAGGGCTT--TA-CATT--AACGCTCATCCAACTGTCGAAGACAACTGAACT-TG-GGGTATGGACTAGT-AAAATATA-AGGCTGTTA-----GCCTGACTGGACAAGTA--AATATTCAGA----AAT-TA---AACAAAGCATCTC-TTTTTCAC------------------------------ATAAAA--CA-G--TTTATTTAATTAtt
gi|103943 : CAAGGCTT--TA-CATA--AACACTCATCCCATTGTCCAAGACAACTGAA-C-CGTGGGTACGGACAAGT-AAACTAT
gi|103944 : CAGGGCTC--AA-CATT--AACACATGTCCGATTGTCAGAGACAAGTATA-T-ATCGGGTATGGGCAAGG-GAAATATA-AAGCTGCTA-----GTCCTACAGGATAATTT---AAATTTGAA----AAT-T
gi|103945 : AGAGCTT--TA-TATT--AACGCTAATGTGACTGTCCAAGACAACTGAA-C-CGTGGGTACGGACACGT-AAAATATA-AGGCTGCTA-----GCCCGAATGGACAAGT---AAAATTTTGA----TAT-TA---AACACGGCATCTC-TTTTTCGCAAATCTCCTGT-TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTCA
gi|103946 : AGGGCTT--TA-AATT--AACGCTTGCCCGACTGTCCGAGAAAACTGAA-T-CGTGGGTATTGACAAGT-AAAATACACAGG-TGGTA-----GCCCGACTGGACAAGTG--AAAATTC
gi|103947 : GGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCGGGACAGCGGAA-T-CATGGGTACAGACAAGT-AAAATATA-AAGCTTCTA-----GCCCAAGTGGACTAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATCCCCTG--TTTCTGAACT-----TTAATAAAA--CA-G--TTTAATTAGTTA
gi|103948 : GGGCTT--TA-CATTTAAACACTCGCCCGACTGTCCGG-ACAACTGAA-T-CGTGGGTACA-ACAAGT-AAAATATA-AGGCTGCTA-----GCTCAACTGGACAAGTG--AAAATTCAGA----AAC-TA---AACACGACATCTC-TTTTTTGTACATCTTCTGT-TTTTTTTACT-----TTAATAAAA--CA-G--TTTATTTAGTTAtt
gi|103949 : GGGCTT--TA-CAAT--AACGCTTGCCTGACTATCCGGGACAAATGAA-T-CATGGGTTCGGACAAGT-AAAACATA-AGGCTTCTA-----GTCCAACTGGACAAGTG--AAAATT--------AAT-TA---AATATGCCATATC-TTTtt
gi|103950 : GGCTT--TA-GATT--AATACTTGCCTGACTGTCTGGGACAACTGAA-T-TGTGGGTATGGACAAGT-AAAATATA-AATCTGCTA-----GCCTGACTGGACAAGTG--TAAATTCAGA----ATT-TA---AATACGGCATTTCTTTTTTCACAAATCCCCTG--Taataaaatagaatatttagttatt
gi|103951 : TT--TATGCTCACCTGACTGTCCAGAACAACTGAA-TTCG-GGGTACAGACAAGT-AAAATATA-AAGCTGCTT-----GCCTGACTGGACAAGTG--AAG--TCAGA----AAT-TT---AACATGGCATCCC-TTTTTTGCAAGTCCCCCG--TCTCATATTCGCTTGTTTTTAAAACTCA-GACTTTTTTTAGTTcacatatttatgtgtttttaaaaca
gi|103952 : --AATGCTCTCACGA-TACCTGGGACATGTAAG-G-AGTGGGTAAGGGCAAGT-GAAGTATA-GAGCTGCTA-----ttt
Alignments
lowQualScore : 22 1 33 1 1 1 1 33333 22 3333 1 222 4 0 2 77 1 555555 22 1 22
lowQualScore : .. . .. . . . . ..... .. .... . ... . . . .. . ...... .. . ..
lowQualScore : 00 4 77 3 3 4 4 66666 00 1111 5 777 6 7 0 00 0 777777 33 7 33
consensus : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
Reference ( family-644 ) : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
gi|103923 : CAGGGCTT--TA-CATC--AACACTCATCCGACTGTCCAAAACAACTGAA-C-CGTGGCTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCTTAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTGAACC-----TTGATAAAA--CA-G--TTTATTTAGTTA
gi|103924 : CAGGGCTT--TA-CATT--AACGCTCATCTGACTGTCCAAGACAACTAAA-C-CGTGGGTACGGACAAGT-AAAATATA-ACGCTACTA-----GCCCGGCTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCCC-TTTTTCGCAAATTCCCTG--TTTTTTAACC-----TTGATGAAA--CT-G--TTTATTTAGTTA
gi|103925 : CAGGGCTT--TA-CATTGTAACGCTCGCCTGACTGTCTGGGACAACTGAA-T-CATGGGTACGGACAAGT-AAAATATA-AAGCTGTTA-----GCCCAACTGGACAAGTG--GAAATTCAGA----AAT-TA---AACACGGCATCTCTTTTTTTGCACATCTCCTGT-TTTTTTAATT-----TTAATGTAA--CA-G--TTTATTTAGTT
gi|103926 : CACGGCTT--TA-CATT--AACGCTCGCCCATCTGTCCGGGACAACTGAA-T-CCTGGGTATGGACAAGT-AAAATATA-AAGGTGCTA-----GCCCAACTGGAAAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTT-GTTTTTGCAAATCCCCTG--TTTTCGATCC-----TTAATAAAA--CAGG--TTTAATTAgtt
gi|103927 : CAGGGCTT--TA-CATT--AACGCTCACCTGGCTGTCCTGGAGAAATGAA-T-CATGGGTACGAACAAAT-AAAATATA-AAGCTGCTA-----GCCTGACTGTACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATTCCCTG--TTTTTGAACT-----TTAATAAAA--CA-G--TTTATTGAGTTAtt
gi|103928 : CAGGACTT--TA-TATT--AATGCTTGCCTGACTGTCCTGGATAACTGAA-T-CCTGGGTATGGACAtt
gi|103928 : TGGACATATGGGAAAATTCAGA----AATATATTCAACACTACATCTG-TTTTT-GTATATCCCCTG--TTTTTGAAT------TCAATAAAA--CA-G--TTTATTTAGTTAtatgggaaaattcagaaatatattcaacactacatctgtttttgtatatcccctgtttttgaattcaataaaacagtttatttagttatt
gi|103929 : caggactttatattaatgcttgcctgactgtcctggataactgaatcctgggtaCAGGGCTT--TA-CATA--AATGCTCGCCTGACTGTCTGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AAGCTGCTG-----TCCCAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCAA-------------------T-----TTAATAAAA--CA-G--TTTGTTTAGTTAtt
gi|103930 : CAGGGCTT--AA-CATC--AACGCCCATCCGACTGTCCAAGACAACTGAA-C-TGTGGGTAAGGTCAAGT-AAAATAAA-AGGCTGCTC-----GCCC-ATTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTGATAAAA--CA-G--ATTATTTAGTTAtt
gi|103931 : CAGGGCTT--TA-CGTT--AACGCTCATCCGACAGTCGCAGACAACTGAT-C-CGTGGGTACGGACAAGT-TAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--GAAATTCAGA----AAT-GA---AACATGGCAGATC-TTTTTCGCAAATACCCTG--TTTTTTAACC-----TTGATAAAA--CA-G--TTTATTTATTTA
gi|103932 : CAGGGTTT--TA-CATT--AACGCTCGCCTGACTGTCCAGGA-AACTGAA-T-CCTGGGTATGGACAAGT-AAAATAAA-AAATGGCTA-----GCCCGATTGAACAAGTG--AGAATTCAGA----AAT-TA---AACATGGAATATC-TTTTTTGCATTTCCCCTG--TTTTTGAACT-----TTAATTAAA--CA-G--TTTATTTAGTTA
gi|103933 : CATGGCTTATTAACAAT--AACGCTCACCCGACTGTCCTGGACTACTGAA-T-AGTGGGTATGAACAAGT-AAACTATA-AAGCTGCTA-----GCCCAACTGGACAAGTG--AAAATTCAGA----TAT-TA---AATACAGCATCTC-TTTTTTGCATATCCCCTG--TTTTTGAACT-----TTAACAAGA--CA-G--TTTATTAAGTTAtt
gi|103934 : CAGGGCTT--TA-CTTT--AACGCTCATCCAGTTGTCTGGGACAATTGAA-T-CATGGGTACAGACAAGT-AAAACGTG-AGGCTGCTT-----GCCCGACTAGACAAGTG--AAAATTCAGA----AAT-TA---AACACAGCATCAC-TTTTTTGCACATCCCCTC--TTTTATAACT-----TTAATAAAA--CA-G--TTTATTTAGTTtt
gi|103935 : CAGGGCTT--TA-CATT--AAAGCTCGCCCATCTGTCCGGGACAATTAAA-T-CTTGGGTCTGGACAGGTTACAATGTA-AGACTGCCATGCCAGCCCAACTGGACAAGCG--AAAATTCAAA----AAT-TA---AACACAGCATCTC-TTTTTTGCACATCCCCTG---TTTTTAACT-----TTAATAAAA--CA-A--TTTATTTAGTTAttt
gi|103936 : CATGGTTT--TA-CATT--AACGCTTATCCGACTGTCCAGGACAACTGAA-T-CGTGGGTACTGACAAGT-ACAATGTA-AGGCTGCTA-----GTCCAACTGGACATATA--AAAATTCAGA----AAT-TA---AACTCGGCATCTC-TTTTTCGCAAAACCCCTGTTTTTTTTAACT-----TTAATAAAA--CA-G--CTAATTTtt
gi|103937 : CAGGGCTT--TA-CATT--AACGCCCATCCGACTGTCCGAAACAACTGAA-C-TGTGAGTACAGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTTGACAAGTA--AATATTCAGA----AAT-TA---AACACGGCATCTC-TATTTCGCAAATCCC--G---TTTTTAACC-----TTGATAAAA---A-A--TTTAATTA
gi|103938 : CAGGACTT--TA-CATT--AACACTCATCCGACTGTCCAAGACAACTGAA-C-CGTGAGTACGGACAAAC-AAACAATA-AGGCTGCTA-----GCCCGACTGGA--------------CAGA----AAT-TA---AACACGGAATCTC-TTTTTCGCAAATCCCCTG--TTATTTATCC-----TTGATAAAA--C-------TATTTAATTA
gi|103939 : CAGGG-TT--AA-CATT--AAAGCTTGAC-GACTGTTCGGGACAACTGAA-T-CTTGGGTAAGGACAAAT-AAGTTATA-AGGCTGCTA---------GACTGGAGAAGTG--AAATTTCAGA----GAT-TA---AACATCACATCTCTTTTTTTGTACATCATCTG--TTCTTTAACT-----TTGATAAAA--CA-G--TTTATTTAGTTAtt
gi|103940 : CAGAGCTT--TA-TAT---------CATCCGACTGTCCAAGACAACTGAA-C-CGCGGGTATGGACAAGT-AAAATATA-AGGCTGCCA-----GCACGACTGGAC-ATTG--AAAATTCGTT----AAT-TA---AACACGGCGTCTT-TTTTTCAAAAATCCCCTG---TTTTTAACC-----TTGATAAAA--CA-A--TTTATTCAGCTAtt
gi|103941 : CAGGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCAGGACAAATTAA-T-CATGTGTACGGTCAAGT-AAAACATA-AGGCTTCTA-----GCCTGACTGGACAAGTG--AAAATTAAGAAATTAAT-TA---AACACAGCAGCTC-TTT------AAT----------------------------AGAA--CA-G--TTTATTTAGTTA
gi|103942 : CAGGGCTT--TA-CATT--AACGCTCATCCAACTGTCGAAGACAACTGAACT-TG-GGGTATGGACTAGT-AAAATATA-AGGCTGTTA-----GCCTGACTGGACAAGTA--AATATTCAGA----AAT-TA---AACAAAGCATCTC-TTTTTCAC------------------------------ATAAAA--CA-G--TTTATTTAATTAtt
gi|103943 : CAAGGCTT--TA-CATA--AACACTCATCCCATTGTCCAAGACAACTGAA-C-CGTGGGTACGGACAAGT-AAACTAT
gi|103944 : CAGGGCTC--AA-CATT--AACACATGTCCGATTGTCAGAGACAAGTATA-T-ATCGGGTATGGGCAAGG-GAAATATA-AAGCTGCTA-----GTCCTACAGGATAATTT---AAATTTGAA----AAT-T
gi|103945 : AGAGCTT--TA-TATT--AACGCTAATGTGACTGTCCAAGACAACTGAA-C-CGTGGGTACGGACACGT-AAAATATA-AGGCTGCTA-----GCCCGAATGGACAAGT---AAAATTTTGA----TAT-TA---AACACGGCATCTC-TTTTTCGCAAATCTCCTGT-TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTCA
gi|103946 : AGGGCTT--TA-AATT--AACGCTTGCCCGACTGTCCGAGAAAACTGAA-T-CGTGGGTATTGACAAGT-AAAATACACAGG-TGGTA-----GCCCGACTGGACAAGTG--AAAATTC
gi|103947 : GGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCGGGACAGCGGAA-T-CATGGGTACAGACAAGT-AAAATATA-AAGCTTCTA-----GCCCAAGTGGACTAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATCCCCTG--TTTCTGAACT-----TTAATAAAA--CA-G--TTTAATTAGTTA
gi|103948 : GGGCTT--TA-CATTTAAACACTCGCCCGACTGTCCGG-ACAACTGAA-T-CGTGGGTACA-ACAAGT-AAAATATA-AGGCTGCTA-----GCTCAACTGGACAAGTG--AAAATTCAGA----AAC-TA---AACACGACATCTC-TTTTTTGTACATCTTCTGT-TTTTTTTACT-----TTAATAAAA--CA-G--TTTATTTAGTTAtt
gi|103949 : GGGCTT--TA-CAAT--AACGCTTGCCTGACTATCCGGGACAAATGAA-T-CATGGGTTCGGACAAGT-AAAACATA-AGGCTTCTA-----GTCCAACTGGACAAGTG--AAAATT--------AAT-TA---AATATGCCATATC-TTTtt
gi|103950 : GGCTT--TA-GATT--AATACTTGCCTGACTGTCTGGGACAACTGAA-T-TGTGGGTATGGACAAGT-AAAATATA-AATCTGCTA-----GCCTGACTGGACAAGTG--TAAATTCAGA----ATT-TA---AATACGGCATTTCTTTTTTCACAAATCCCCTG--Taataaaatagaatatttagttatt
gi|103951 : TT--TATGCTCACCTGACTGTCCAGAACAACTGAA-TTCG-GGGTACAGACAAGT-AAAATATA-AAGCTGCTT-----GCCTGACTGGACAAGTG--AAG--TCAGA----AAT-TT---AACATGGCATCCC-TTTTTTGCAAGTCCCCCG--TCTCATATTCGCTTGTTTTTAAAACTCA-GACTTTTTTTAGTTcacatatttatgtgtttttaaaaca
gi|103952 : --AATGCTCTCACGA-TACCTGGGACATGTAAG-G-AGTGGGTAAGGGCAAGT-GAAGTATA-GAGCTGCTA-----ttt
blockSeqs : AT A GT C T T C TGCCA GG AATT A TTC T A TT T CGCTTG CT G AC
blockSeqs : . . TA . . . . . . . . . T C T T C . . .
blockSeqs : . . . . . . . . . . . . T A T G T . . .
blockSeqs : . . . . . . . . . . . . . T T G C . . .
blockSeqs : . . . . . . . . . . . . . T . G T . . .
blockSeqs : . . . . . . . . . . . . . A . T T . . .
blockSeqs : . . . . . . . . . . . . . A . T C . . .
blockSeqs : . . . . . . . . . . . . . A . G C . . .
blockSeqs : . . . . . . . . . . . . . T . G T . . .
blockSeqs : . . . . . . . . . . . . . T . T T . . .
blockSeqs : . . . . . . . . . . . . . C . T T . . .
blockSeqs : . . . . . . . . . . . . . C . T T . . .
blockSeqs : . . . . . . . . . . . . . A . T T . . .
blockSeqs : . . . . . . . . . . . . . A . T C . . .
blockSeqs : . . . . . . . . . . . . . A . T C . . .
blockSeqs : . . . . . . . . . . . . . C . T T . . .
blockSeqs : . . . . . . . . . . . . . A . T C . . .
blockSeqs : . . . . . . . . . . . . . A . G C . . .
blockSeqs : . . . . . . . . . . . . . A . T T . . .
blockSeqs : . . . . . . . . . . . . . T . T T . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . .
blockSeqs : . . . . . . . . . . . . . A . . . . . .
blockSeqs : . . . . . . . . . . . . . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . .
blockSeqs : . . .
blockSeqCons :
originalCons : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
finalCons : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
Alignments
lowQualScore : 22 1 33 1 1 1 1 33333 22 3333 1 222 4 0 2 77 1 555555 22 1 22
lowQualScore : .. . .. . . . . ..... .. .... . ... . . . .. . ...... .. . ..
lowQualScore : 00 4 77 3 3 4 4 66666 00 1111 5 777 6 7 0 00 0 777777 33 7 33
consensus : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
Reference ( family-644 ) : CAGGGCTT--TA-CATT--AACGCTCGCCCGACTGTCCGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTTA
gi|103923 : CAGGGCTT--TA-CATC--AACACTCATCCGACTGTCCAAAACAACTGAA-C-CGTGGCTACGGACAAGT-AAAATATA-AGGCTGCTA-----GCTTAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTGAACC-----TTGATAAAA--CA-G--TTTATTTAGTTA
gi|103924 : CAGGGCTT--TA-CATT--AACGCTCATCTGACTGTCCAAGACAACTAAA-C-CGTGGGTACGGACAAGT-AAAATATA-ACGCTACTA-----GCCCGGCTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCCC-TTTTTCGCAAATTCCCTG--TTTTTTAACC-----TTGATGAAA--CT-G--TTTATTTAGTTA
gi|103925 : CAGGGCTT--TA-CATTGTAACGCTCGCCTGACTGTCTGGGACAACTGAA-T-CATGGGTACGGACAAGT-AAAATATA-AAGCTGTTA-----GCCCAACTGGACAAGTG--GAAATTCAGA----AAT-TA---AACACGGCATCTCTTTTTTTGCACATCTCCTGT-TTTTTTAATT-----TTAATGTAA--CA-G--TTTATTTAGTT
gi|103926 : CACGGCTT--TA-CATT--AACGCTCGCCCATCTGTCCGGGACAACTGAA-T-CCTGGGTATGGACAAGT-AAAATATA-AAGGTGCTA-----GCCCAACTGGAAAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTT-GTTTTTGCAAATCCCCTG--TTTTCGATCC-----TTAATAAAA--CAGG--TTTAATTAgtt
gi|103927 : CAGGGCTT--TA-CATT--AACGCTCACCTGGCTGTCCTGGAGAAATGAA-T-CATGGGTACGAACAAAT-AAAATATA-AAGCTGCTA-----GCCTGACTGTACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATTCCCTG--TTTTTGAACT-----TTAATAAAA--CA-G--TTTATTGAGTTAtt
gi|103928 : CAGGACTT--TA-TATT--AATGCTTGCCTGACTGTCCTGGATAACTGAA-T-CCTGGGTATGGACAtt
gi|103928 : TGGACATATGGGAAAATTCAGA----AATATATTCAACACTACATCTG-TTTTT-GTATATCCCCTG--TTTTTGAAT------TCAATAAAA--CA-G--TTTATTTAGTTAtatgggaaaattcagaaatatattcaacactacatctgtttttgtatatcccctgtttttgaattcaataaaacagtttatttagttatt
gi|103929 : caggactttatattaatgcttgcctgactgtcctggataactgaatcctgggtaCAGGGCTT--TA-CATA--AATGCTCGCCTGACTGTCTGGGACAACTGAA-T-CGTGGGTACGGACAAGT-AAAATATA-AAGCTGCTG-----TCCCAACTGGACAAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCAA-------------------T-----TTAATAAAA--CA-G--TTTGTTTAGTTAtt
gi|103930 : CAGGGCTT--AA-CATC--AACGCCCATCCGACTGTCCAAGACAACTGAA-C-TGTGGGTAAGGTCAAGT-AAAATAAA-AGGCTGCTC-----GCCC-ATTGGACAAGTG--AAAATTCAGA----AAT-TA---AACACGGCATCTC-TTTTTCGCAAATCCCCTG--TTTTTTAACC-----TTGATAAAA--CA-G--ATTATTTAGTTAtt
gi|103931 : CAGGGCTT--TA-CGTT--AACGCTCATCCGACAGTCGCAGACAACTGAT-C-CGTGGGTACGGACAAGT-TAAATATA-AGGCTGCTA-----GCCCGACTGGACAAGTG--GAAATTCAGA----AAT-GA---AACATGGCAGATC-TTTTTCGCAAATACCCTG--TTTTTTAACC-----TTGATAAAA--CA-G--TTTATTTATTTA
gi|103932 : CAGGGTTT--TA-CATT--AACGCTCGCCTGACTGTCCAGGA-AACTGAA-T-CCTGGGTATGGACAAGT-AAAATAAA-AAATGGCTA-----GCCCGATTGAACAAGTG--AGAATTCAGA----AAT-TA---AACATGGAATATC-TTTTTTGCATTTCCCCTG--TTTTTGAACT-----TTAATTAAA--CA-G--TTTATTTAGTTA
gi|103933 : CATGGCTTATTAACAAT--AACGCTCACCCGACTGTCCTGGACTACTGAA-T-AGTGGGTATGAACAAGT-AAACTATA-AAGCTGCTA-----GCCCAACTGGACAAGTG--AAAATTCAGA----TAT-TA---AATACAGCATCTC-TTTTTTGCATATCCCCTG--TTTTTGAACT-----TTAACAAGA--CA-G--TTTATTAAGTTAtt
gi|103934 : CAGGGCTT--TA-CTTT--AACGCTCATCCAGTTGTCTGGGACAATTGAA-T-CATGGGTACAGACAAGT-AAAACGTG-AGGCTGCTT-----GCCCGACTAGACAAGTG--AAAATTCAGA----AAT-TA---AACACAGCATCAC-TTTTTTGCACATCCCCTC--TTTTATAACT-----TTAATAAAA--CA-G--TTTATTTAGTTtt
gi|103935 : CAGGGCTT--TA-CATT--AAAGCTCGCCCATCTGTCCGGGACAATTAAA-T-CTTGGGTCTGGACAGGTTACAATGTA-AGACTGCCATGCCAGCCCAACTGGACAAGCG--AAAATTCAAA----AAT-TA---AACACAGCATCTC-TTTTTTGCACATCCCCTG---TTTTTAACT-----TTAATAAAA--CA-A--TTTATTTAGTTAttt
gi|103936 : CATGGTTT--TA-CATT--AACGCTTATCCGACTGTCCAGGACAACTGAA-T-CGTGGGTACTGACAAGT-ACAATGTA-AGGCTGCTA-----GTCCAACTGGACATATA--AAAATTCAGA----AAT-TA---AACTCGGCATCTC-TTTTTCGCAAAACCCCTGTTTTTTTTAACT-----TTAATAAAA--CA-G--CTAATTTtt
gi|103937 : CAGGGCTT--TA-CATT--AACGCCCATCCGACTGTCCGAAACAACTGAA-C-TGTGAGTACAGACAAGT-AAAATATA-AGGCTGCTA-----GCCCGACTTGACAAGTA--AATATTCAGA----AAT-TA---AACACGGCATCTC-TATTTCGCAAATCCC--G---TTTTTAACC-----TTGATAAAA---A-A--TTTAATTA
gi|103938 : CAGGACTT--TA-CATT--AACACTCATCCGACTGTCCAAGACAACTGAA-C-CGTGAGTACGGACAAAC-AAACAATA-AGGCTGCTA-----GCCCGACTGGA--------------CAGA----AAT-TA---AACACGGAATCTC-TTTTTCGCAAATCCCCTG--TTATTTATCC-----TTGATAAAA--C-------TATTTAATTA
gi|103939 : CAGGG-TT--AA-CATT--AAAGCTTGAC-GACTGTTCGGGACAACTGAA-T-CTTGGGTAAGGACAAAT-AAGTTATA-AGGCTGCTA---------GACTGGAGAAGTG--AAATTTCAGA----GAT-TA---AACATCACATCTCTTTTTTTGTACATCATCTG--TTCTTTAACT-----TTGATAAAA--CA-G--TTTATTTAGTTAtt
gi|103940 : CAGAGCTT--TA-TAT---------CATCCGACTGTCCAAGACAACTGAA-C-CGCGGGTATGGACAAGT-AAAATATA-AGGCTGCCA-----GCACGACTGGAC-ATTG--AAAATTCGTT----AAT-TA---AACACGGCGTCTT-TTTTTCAAAAATCCCCTG---TTTTTAACC-----TTGATAAAA--CA-A--TTTATTCAGCTAtt
gi|103941 : CAGGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCAGGACAAATTAA-T-CATGTGTACGGTCAAGT-AAAACATA-AGGCTTCTA-----GCCTGACTGGACAAGTG--AAAATTAAGAAATTAAT-TA---AACACAGCAGCTC-TTT------AAT----------------------------AGAA--CA-G--TTTATTTAGTTA
gi|103942 : CAGGGCTT--TA-CATT--AACGCTCATCCAACTGTCGAAGACAACTGAACT-TG-GGGTATGGACTAGT-AAAATATA-AGGCTGTTA-----GCCTGACTGGACAAGTA--AATATTCAGA----AAT-TA---AACAAAGCATCTC-TTTTTCAC------------------------------ATAAAA--CA-G--TTTATTTAATTAtt
gi|103943 : CAAGGCTT--TA-CATA--AACACTCATCCCATTGTCCAAGACAACTGAA-C-CGTGGGTACGGACAAGT-AAACTAT
gi|103944 : CAGGGCTC--AA-CATT--AACACATGTCCGATTGTCAGAGACAAGTATA-T-ATCGGGTATGGGCAAGG-GAAATATA-AAGCTGCTA-----GTCCTACAGGATAATTT---AAATTTGAA----AAT-T
gi|103945 : AGAGCTT--TA-TATT--AACGCTAATGTGACTGTCCAAGACAACTGAA-C-CGTGGGTACGGACACGT-AAAATATA-AGGCTGCTA-----GCCCGAATGGACAAGT---AAAATTTTGA----TAT-TA---AACACGGCATCTC-TTTTTCGCAAATCTCCTGT-TTTTTTAACC-----TTAATAAAA--CA-G--TTTATTTAGTCA
gi|103946 : AGGGCTT--TA-AATT--AACGCTTGCCCGACTGTCCGAGAAAACTGAA-T-CGTGGGTATTGACAAGT-AAAATACACAGG-TGGTA-----GCCCGACTGGACAAGTG--AAAATTC
gi|103947 : GGGCTT--TA-CATT--AACGCTTGCCCGACTGTCCGGGACAGCGGAA-T-CATGGGTACAGACAAGT-AAAATATA-AAGCTTCTA-----GCCCAAGTGGACTAGTG--AAAATTCAGA----AAT-TA---AACATGGCATCTC-TTTTTTGCATATCCCCTG--TTTCTGAACT-----TTAATAAAA--CA-G--TTTAATTAGTTA
gi|103948 : GGGCTT--TA-CATTTAAACACTCGCCCGACTGTCCGG-ACAACTGAA-T-CGTGGGTACA-ACAAGT-AAAATATA-AGGCTGCTA-----GCTCAACTGGACAAGTG--AAAATTCAGA----AAC-TA---AACACGACATCTC-TTTTTTGTACATCTTCTGT-TTTTTTTACT-----TTAATAAAA--CA-G--TTTATTTAGTTAtt
gi|103949 : GGGCTT--TA-CAAT--AACGCTTGCCTGACTATCCGGGACAAATGAA-T-CATGGGTTCGGACAAGT-AAAACATA-AGGCTTCTA-----GTCCAACTGGACAAGTG--AAAATT--------AAT-TA---AATATGCCATATC-TTTtt
gi|103950 : GGCTT--TA-GATT--AATACTTGCCTGACTGTCTGGGACAACTGAA-T-TGTGGGTATGGACAAGT-AAAATATA-AATCTGCTA-----GCCTGACTGGACAAGTG--TAAATTCAGA----ATT-TA---AATACGGCATTTCTTTTTTCACAAATCCCCTG--Taataaaatagaatatttagttatt
gi|103951 : TT--TATGCTCACCTGACTGTCCAGAACAACTGAA-TTCG-GGGTACAGACAAGT-AAAATATA-AAGCTGCTT-----GCCTGACTGGACAAGTG--AAG--TCAGA----AAT-TT---AACATGGCATCCC-TTTTTTGCAAGTCCCCCG--TCTCATATTCGCTTGTTTTTAAAACTCA-GACTTTTTTTAGTTcacatatttatgtgtttttaaaaca
gi|103952 : --AATGCTCTCACGA-TACCTGGGACATGTAAG-G-AGTGGGTAAGGGCAAGT-GAAGTATA-GAGCTGCTA-----ttt