lowQualScore : 1 666666666666666666666666666666 22 111111111111111111 33333333 11 1111 11
lowQualScore : 22 55 22 6 7 4444 222222222222222222222222222222 3 666 3 33 4 3 7 1 6 999999999999 444444 1 222222222222222222 4444444 1 22222222 3333 6666 666 3 22 88 1 888 22 44 1 22 6666 222 1 22 1 22 4 5 222 1 1 1 3 1 44444 22 1 1 3333 777777 1 1 22 1 222 3 33
lowQualScore : .. .. .. . . .... .............................. . ... . .. . . . . . ............ ...... . .................. ....... . ........ .... .... ... . .. .. . ... .. .. . .. .... ... . .. . .. . . ... . . . . . ..... .. . . .... ...... . . .. . ... . ..
lowQualScore : 99 88 88 0 0 0000 111111111111111111111111111111 0 000 2 66 2 2 1 6 4 444444444444 444444 5 444444444444444444 8888888 5 22222222 1111 6666 777 3 00 11 5 777 00 88 4 00 8888 555 4 00 4 00 2 7 666 6 6 6 0 6 22222 33 7 6 3333 777777 5 5 11 5 777 1 66
consensus : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-TATGATAGAAAGCTTGNCATTTCTGAAAATATCAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAAGAGTTG---AT---ATTCCTACT--ATA--GCAG-A---A--A--TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACGTTCTC---TGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCA---C-TG-CAGTGCTTTGATTT
Reference ( gi|67450 ) : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGTTTGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TATATGATAGAAAGCTTGGCATTTCTGAAAATATCAC---G-AGTTACGCTG-AAGGT-ACAAATCTCGTAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGAGT------TTTGCC----AAATTTAAGAGTTA---AT---ATTCTTACT--ATA--GCAG-A---A--A--TA-C--ACTTTCAAAT---GCAAA---C-CA--T-T--CAGTTACGTTCTC---TGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCA---C-TG-AAGTGCTTTGATTT
gi|67452 : AAGTAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TATATGATAGAAATCTTGGTATTTCTGAAAATATCAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAC------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAAGAGTTA---AT---ATTCTTACT--ATA--GCAG-A---A--A--TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACGTT-TC---TGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTATATTCCGTAC-CA-----CGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACATATGCAAACGGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCA---C-TG-CAGTGCTTTG
gi|67451 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTAATATATA------------------CTG----TATATGATAGAAAACTTGGCATTTATGAAAATATCAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------CTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAAGAGTTG---AT---ATTCTTATT--AAA--GCAG-A---A--A--TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACATT-TC---TGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTTTTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTA---C-TA-TAGTGCTTTGATT
gi|67453 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TATATGATAGAAAGCTTGGTATTTCTGAAAATATCAC---G-AGTTGAGTTG-AACAT-ACAAATCTCATAT------------AA------TTGA-GCTGAC------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAATAGTTG---AT---ATTCCTACT--ATA--GCAG-A---A--A--TA-C--ACTTTCAAAG---TCAAA---C-AA--T-T--CAGTTACGTT-TC---TGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCGTAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCAGCGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GATAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCA---C-TG-CAGTGCTTTGATT
gi|67454 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGATATTTTATATATA------------------CTG----TTTATGATAGAAAGCTTGGCATCTCTGAAAATAT------G-AGTT-----G-AAGAT-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAAAAGTTA---AT---ATTCTTACT--ATA--GCAG-A---A--A--TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACGTT-TC---TGACATATTCGAGAA-AAGA-GTCA-ATGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGGAACAAA--GGTAATCAAGATTATTCTAC-TTCAA-GTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCA---C-TA-CAGTGCTTTGATTT
gi|67455 : AAATAGTAAATGAATA--TA--CTCAAAATGGAATTC--ATCATGCTAGATTCAGAG----CACTTTGATATTTTATATAT-------------------------------GATAGAAAGCTTGGCATTTCTGAAAATAGTAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------CTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAAGAGTTA---AT---ATTCTTACT--ATA--GCAG-A---A--A--TA-C--GCTTTCAAAG---GCAAA---A-CA--T-T--CAGTTACGTT-TC---TGACATATTCAAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATGGGTATTATTCTAC-TTCAACGTATGCAAACTGACC-GGTTTGTC----TA------GAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCA---C-TG-CAGTGCTTTGATT
gi|67459 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTTCTAGATTCAGAG----CATTTTGATATTTTATATATA------------------CTG----TATATGATAGAAAGCTTGGCATTTCTGAAAATATCAC---G-AGTTGAGTTG-AAAAT-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGG------------------------------------AC---ATT--TACT--ATA--GCAG-A---A--A--TA-C--ACTTTCAAAG---ACAAA---C-CA--T-T--CAGTTACGTT-TC---TGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGAATAAGAATCAAA--GGTAAACGGGATTATTTTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTA---C-TA-CAGTGCTTTGATT
gi|67456 : AAATAGTAAATAAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATAT-------------------------------GATAGAAAGCTTGTCATTTCTGAAAATATCAG---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTTCC----AAATTGAACAGTTG---AT---ATTCCTACT--ATA--GCAG-A---A--AC-TA-T--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACATTCTC---CGACTTATTGGAGGA-AAAG-GTCA-ACGTTAGGCATAGAACATGTAGATTTTGTAC-CC-----TGTTTAAAAATCAAA--GGTAATAGGGATTATTCTAC-TTCAACGTATGCAAACTAACC-TGTTTGTC----TA------AAACAATAGC-GACAT-AT--TACATTTTATATGCTCCGCCCCT-ATCAGGA---C-TG-CAGTGCTTTGATTT
gi|67458 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAAGTC--ATCGTGCTAGATTCAGAG----CAATTTGATATTTTATATAT-------------------------------GATAGAAAGCTTGTCATTTCTGAAAATATCAC---G-AGTTGAGCTG-TAGAT--CAAATCTCATAT------------CA------CTGA-TTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGTC----AAACTTAACAGTTG---AT---ATTCATACT--ATA--GCAG-A---A--AA-TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACATTCTC---TGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----AGTATAAGAATCAAA--GGTAATCGGGATTATTCTAA-TTCAACGTATGCAAACTGACC-TGTTTATT----TA------AAACAATAGC-GACAT-AT--TACATTTTATATACTCCGCCCCC-ATCAGCA---A-TG-CAGTGGTTTGATTT
gi|67457 : AAATTGTAAATAAATA--TA--CTCAAAGTCAAATTC--ATCGTGCTAGATTCGGAG----CA-------ATTTTATATAT-------------------------------GATAGAAAGCTTGTCATTTCTGAAAATATCAT---G-AGTTGAGTTG-AAGAA-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTTAAGTTGGACA------TTTGCC----AAATTTATGAGTTG---AT---ATTCCTACT--ATA--GCAG-A---A--AA-TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--TAATTACATTCTC---TGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAATGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCTCC-ACCAGCA---C-TA-CAGTGCTTTGATTT
gi|67461 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAG----CACTTTGATATTTTATATAT-------------------------------GATAGAAAGCTTGTCATTTCTGAAAATATCA----G-AGTT-----G-AAGAT-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGATGGACA------TTTGCC----AAATTTAAGGCTTG---AT---ATTCTTACT--ATA--GCAG-A---A--AA-TA-C--ATTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACATGCTC---TGAATTATTCAAGAT-AAGG-GTCA--------GCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TATATCTTAAATGCTCCACCCCC-ATCAACA---C-CG-CAGTGCTTTGATTT
gi|67460 : AAATAGTAAATGAATA--TATACTCAAAGTGGAAGTC--ATCGTGCTAGATTCATAG----CACTTTGATATTTTATATATGATAGAAAGCTAGTAATTCCTGAATTTATATGATAGAAAGCTAGTCATTCCTTAATTTATCAC---G-AAATGAGTTG-AAGAT-ACAAATCTCATAT------------CA------TTGA-GCTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTGAACAGTTG---AT---ATTCCTACT--ATA--GCAG-A---A--AA-TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTAAATTCTC---TGGCTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGCAGATT-TGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCGAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATTTAATATGCTCCGCCCTC-ATCAGCA---C-TA-TAGTGCTTTGATTT
gi|67462 : AAATAGTTAATGAATA--TA--TGCAAAGTGAAATTC--ATCGTGCTAGATTTAGAG----CACTTT-ATATTTTATATAT-------------------------------GATAGAAAGCTTGTTATTTCTGAAAATATCAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------TTGA-GTCGAA------------------CTAAA-------A-TCCTGAAGTTGGACA------TTTGCC----AAATTTAAGAGTTG---AT---ATTCATACT--ATA--GCAG-A---A--AAATA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAATTACATTCTC---TGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTTTAC-CC-----AGTATAAGAATCAAA--AGAAATCGGGATTATTTTAC-TTCAACGTATGCAAATTGATC-TGTTTGTC----TA------AAA-AA-AGC-GACAT-TT--TACAACTTATATGCTCCGCCCCCTATCAGCA---C-GG-TAGTGTTTTGATTT
gi|67463 : AAATGGTGAATGAATA--TA--CTCAAAGTGGAATTC--ATCATGCTAGATTCAGAG----TACTTTGATATCTTATATAT-------------------------------GATAAAAAGCTTGTCATTTCTGAAAATATCAC---A-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------ATGA-ATTTAA------------------CTTAT-------A-TCTTGAAGTTGAACA------TTTGCC----AAATTTAAGAGTTG---AT---ATTCCTACA--AAA--GCAG-A---A--A--TA-C--ACTTTCAAAA---GCAAA---C-CA--T-T--CAGTTACATTCTC---TGACTTATTTGAGAA-AAGG-CTCA-ACATTTAACATAGAATATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--AGTAATCGGGAT
gi|67464 : AAACAGTAAATTAATA--AA--CTCAAAGTGGAATTTGAAT-GTGCTAGGTTTAGAG----T-TTTTGATATTTCA-----A--------------------------ATATGATAAAACGCTTGACATTTTTGAAAATATCAC---GGACTTAAGTTG-TATAT-AGAAAT-----AT------------AA------GCGA-AATAAA------------------CGAAT-------A-T------GTTGGAGTAACACATTTGCC----AAAGTTAAGAGTTATTAAC---ATTCCTACT--ATATAGCAG-ACA-A--A--TA-C--ACTTTCAAA----ACCAA---CACA--T-T--AAGTTACCGTATC---TGACCTATTCGAAAA-AAGG-GTCA-ACATTTAGCACAGAACATGTATATTTTGTAC-TC-----TGTATTAGAATCAAT--GGTTTTCGGGATTATTCTAC-TTCAATGTGTACAAACTGACC-TGTTTGTC----TATTACAAAAACAACAGT-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTA---C-TT-GAGTGCTTTGATTctaaaacaatagcaacattttacatcttatatgctccgcccccatcagcactgcagtgctttgattt
gi|67465 : AAATATTAATTGAATA--TA--TTCAAAGTGGAATTC--ATGGTGCTAGATTCAGAG----CACTTTGATATTTTATATA-------------------------------TGATAGAAAGCTTGTCATTTCTGAAAATATCAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------ATGA-GTTGAA------------------CTAAT-------A-TCTTTAAGTTGGACA------TATGGC----AAATTTAAGAGTTG---AT---ATTCCTACT--ATA--ACAGAA---A--A--TA-C--AC-----AAT---CAAAA---C-CA--T-T--C---TAC-TTCT------ACTT
gi|67468 : AAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TATATGATAGAAAGCTTGGCATTTCTGAAAATATCAT---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------TA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGAC----AAATTTAAGAGTTA---AT---ATTCCTACT--ATA--GCAG-A---A--A--TT-C--ACTTCCAAAG---GCAAA---C-TA--T-T--CAGTTACGTTCTC----G--TTATTCCAGAA-AAGG-GTCA-ACGTTAAGCATAGAATGTGAAGATTTTGTAC-CC-----TGTATAAGGATCAAA--GGTAATCGGAATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGCC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTTCGCCCAG-ATCATCA---C-TG-TAGTGCTTTGATTT
gi|67467 : AAATCAATA--CAGACTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----TTTATGATAGAAAGCATGACATCTCTGAAAATATCAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAAAAGTTA---AT---ATTCTTACT--ATA--GCAG-A---A--A--TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACGTT-TC---TGACATATTCGAGAA-AGGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAA-TGTTTGTC----TA------AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCA---T-TA-CAGTGCTTTGATTT
gi|67466 : tagagAAATCAATAAAGA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----TTTATGATAGAAAGCATGACATCTCTGAAAATATCAC---G-AGTAGAGTTG-AAGAT-ACAAATCTCATAT------------CA------TTGA-GTTGAA------------------CTAAT-------A-TCTTGAAGTTGGACA------TTTACC----AAATTTAAAAGTTA---AT---ATTCTTACT--ATATAGCAG-A---A--A--TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACGTT-TC---TGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCA---C-TA-CAGTGCTTTGATTT
gi|67469 : tagagAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAGAGAGCACTTTGATATTTTATATAT-------------------------------GATAAAAAGCTTGTAATTTCTGAAAATATCAC---G-AGTCGAGTTG-AAGAT-ACAAATCTCATAT------------CA------ATGA-ATTTAA------------------CTTCT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAAGAGTTG---AT---ATTCCTACT--ATA--CCAG-A---A--AA-TA-T--ACTTTCAAAG---GCAAA---C-AA--T-T--TAGTTACATGCTC---CGACTTATTCCAGAA-AAGG-GTCA-ACGTTAAGCACAGAACGTGTA-ATTTT-TGC-CC-----TGTATATGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACTTATGCAAACTGGCC-TGTTTGTC----TA------AAACAATAGC-AACAT-TT--TACATCTTATATGCTACGCCCCC-ATCAGTT---C-TG-CAGTGCTTTGATT
gi|67470 : AGAGAAATCA--ATCGTGCTAGATTCAGAG----CACTTTGATAT------------------------------------ATATGATAGAAAGCTTGTCATTTCTGAAAATATTAC---G-AGTTGAGTTG-AAGAT-ACAAATCTCATAT------------TA------TTGA------------------------------------------TGAAGTT-------------TGCC----AAATTTAAGAGTTG---AT---ATTCCTACT--ATA--GCAG-A---A--AA-TA-C--ACTTTCAAAA---GCAAA---C-CG--T-T--CAGTTACACTCTC---TGACTTATCTGAGAA-AAGG--TCA-ACGTTAAGCATAGAACATGTAGAGTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCCACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCGTATATGCTCCGCCCCA-ATCAGCA---C-TG-GAGTGCTTTGATTT
gi|67471 : TGCTAGGTCCAGTG----CACTTTGATATTTTACAT------------------------------T-TGAAAAAAAGCTTGGCACTTCTGAAAATAATAT---GCAGTTGAGCTTTAA--T-ACTAATCTCATATTTTGGAATTGAACAAAATATTTGA-GTTGAATTGTTATACATCCATCCCCTAATGACGCAAA-TCTTGGAGCTGAACA------TCCGCC----AAATTTGAGAGTTA---TTTCCATGCCTATT--ACAAAGCAG-ACA-A--A--TA-T--ACTTCCAAAG---GCAAC---A-AA--T-T--CAGTTTCCTTCTC---TGCCTTATTCGAAAA-AGGG-GTAA-ACCTT--GCACAAATCATGTTAATTTTGTAC-
gi|67472 : TGATAGAAAACTTGGCATTTTTAAAAATATCATG--G-AGTTTAGTTGTAA--T-ACAAATCTCATAT------------CT------TGGA-GTTGAA--------------------AAC-------ATTCTTTGAGTTGAA
gi|67472 : CTTGGAGTT---GAAAACATT-CTTTG-AGTTGAACTG-----TCATAAATCACATATT-----------CA--------GA-GTTGAA------------------CAGAT-------G-TCTTGGAGTTGAA----------CACCCATGAAATTTAAAAGTTC---TTTCCATGTCTACT--ATATAGCAG-ACAAATCA--TG-C--ACTTATAAAG---GCAAC---A-CA--T-T--CCGTTACCTTCTC---TGCCTTATTctgtcataaatcacatattcagagttgaacagatgtcttggagttgaacacccatgaaatttaaaagttctttccatgtctactatatagcagacaaatcatgcacttataaaggcaacacattccgttaccttctctgccttatt
gi|67473 : tgatagaaaacttggcatttttaaaaatatcatggagtttagttgtaatacaaatctcatatATTTCTG-AAATATCATG--G-AGTTGAACTG-AA-AT-ACAAATCACATAT------------CT------TGGC-ATTGAT------------------CACAT-------A-TTTT
gi|67474 : ---G-AGTTGAGTTG-AAGAT-ACAAGTCTCATAT------------CA------TTGA-GTTGAT------------------CTTAT-------A-TCTTGAAGTTAGACA------TTTGCC----AAATTTAAGAGATG---AT---ATTCCTACT--ATA--GCAG-A---A--A--AAAC--ACATTCAAAG---GCAAA---C-CA--T-T--CAGTTACATTCTC---TGACTTAGTCGAGAA-AAGG-GTCT-ATATCAAGCATAGAGCATGCAGATTTTGTAAACC-----TGTATAAGAATCAAA--GGTAATAGGGAGTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACTT-TT--TACATCTTATATGCTCCGCCGCC-ATCAGCA---C-TG-TAGTCCTTTGATTTtttagttgaactgcca
gi|67475 : TAT------------CA------TGGCTGTTGAAT-----------------CTAAT-------A-TCTTGAAGTTGGACA------TTTGCC----AAATTTAACAGTTG---AT---ATTCCTACT--GTA--GCAG-A---A--AA-TA-C--ACTTTCAAAG---GCAAA---C-CA--T-T--CAGTTACATTCTC---TGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTGTGTAC-CC-----TGTATAAGAATCAAATTTATAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTT----TA------AAACAATAGC-AACAT-TT--TACATTTTATATGCTCCGCCCCC-ATCAGCA---C-AC-TAGTGCTTTGATTT
gi|67476 : TTTAG------------------CTAAT-------A-TCTTGAAGTTCGACA------ATTGCC----AAATTTAAGAGTTG---CT---TTTCCTACT--ATA--GCAG-A---A--AA-TA-C--ACTTTCAAAG---GAAAA---C-CA--T-T--CAGTTACATGCTC---TGATTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAAATTTTGTTC-CC-----TGTATAAGAACCAAA--TGTAATCGGGGTTATTCTAC-TTCAACGTATGCCAACTGACC-TGTTTGTC----TA------AAACAATAGT-GACAT-TT--TACATCTTATTTGCTTCG-CACC-ATTAGCA---C-TGTAAG-GCTTTGATT
gi|67455 : GT------TTTGCC-------TTTGAAAGC-----GT---ATTTCTGCT--ATA--GTAA-G---A--A--TA-TTAACTCTTAAATTTGGCAAATGTC-CAACT-T--CA
gi|67477 : aaatagtaaatgaatatactcaaaatggaattcatcatgctagattcagagcactttgatattttatatatgatagaaagcttggcatttctgaaaatagtacgagttgagttgaagatacaaatctcatatcactgagttgaactaatatctT------TTCACA----AAGTCTA-GAGTTATA-ATC--ATGCCTACTTCATA--TCAC-ATG-G--C--TT-C--TCTTTCAA---------------CA--T-TTTCAGTTTCCTTCTC---CGACCTATGCGAAAA-AAAATGCCATTCCTTAAGCATGAAACAATTTGATTTTGC-C-CCTTAATTGTGTTTAAATCACT--TGCAGCAGGGCTTAT--TACATTTAATG-------AGTGAC------------------------ACAACAGT-GCCAT-TTAAAAAATCTGCCACTCTCTGCCCCC-TTCAGTA---CTTT-TAGTGCTTTTATTTattcagttacgtttctgacatattcaagaaaagagtcaacgttaagcatagaacatgtagattctgtaccatgtataagaatcaaaggtaatgggtattattctacttcaacgtatgcaaactgaccggtttgtctagaacaatagcgacattttacatcttatatgctccgcccccatcagcactgcagtgctttgatt
gi|67478 : ata--A--TA-C--ATTTTCAAAG---GGAAA---C-AA--TCT--AAGTTACCTTCTCCTCTGATTTATTCGAAAATATGG-GCCA-ACTTT--GCACAGAA-----------TGTAC-CA-----TGCATTAG---CAA-----TACTCG---------------CAACG-GTACAAACTGGAC-TTCTTGTT----TATTAC--AAAAAAAACCTAACATGTT--CACATCTTGCACGTTCCGCCCCA-AT-AGTACTTC-TG-A--TGCTTTGATTT
gi|67479 : TTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----TA------AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCA---C-TG-CAGTGCTTTGATTT
gi|67480 : TATGTAAAC-GACCCTGCATGTCCACATA------AAACAAGGTC-AACAT-TT--TACATCTTCCCTGCT----CCCT-TTCAGTA---CTTA-AAGTGCTTTGATT
gi|67463 : TC----TA------AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCA---C-TG-CAGTGCTTTGATTT
Alignments
lowQualScore : 77777777777777777777777777777777 11
lowQualScore : 22 55 22 3333 22222222222222222222222222222222 1 5555555 5 1 44 1 1 1 1 2 11 444444 444 7777 22 88 1 888 22 44 1 1 22 3 7777 1 1 1 1 44444 22 1 1 3333 444444 3333 1 1 22 1 3 1
lowQualScore : .. .. .. .... ................................ . ....... . . .. . . . . . .. ...... ... .... .. .. . ... .. .. . . .. . .... . . . . ..... .. . . .... ...... .... . . .. . . .
lowQualScore : 88 55 66 9999 77777777777777777777777777777777 6 2222222 9 5 11 4 4 4 4 8 99 111111 555 2222 00 11 5 777 00 88 4 4 00 7 7777 5 5 5 5 00000 22 6 5 1111 333333 1111 5 5 00 5 0 5
consensus : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-T-ATGATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
Reference ( family-628 ) : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-T-ATGATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
gi|67450 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGTTTGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCACG-AGTTACG-CTGAA--GGTACAAATCTCGTAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGAGTTTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAATGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGAAG-TGCTTTGATTT
gi|67451 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTAATATATA------------------CTG----TAT-ATGATAGAAAACTTGGCATTTAT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CACTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCTTATT--AAA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTTTTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TATAG-TGCTTTGATT
gi|67452 : AAGTAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAATCTTGGTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAC-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTATATTCCGTAC-CA-----CGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACATATGCAAACGGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTG
gi|67453 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--CATACAAATCTCATAT-AATTGA-GCTGAC-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAATAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGTCAAACAAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCGTAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCAGCGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GATAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATT
gi|67454 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGATATTTTATATATA------------------CTG----T-TTATGATAGAAAGCTTGGCATCTCT-------GAAAATAT---------GAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ATGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGGAACAAA--GGTAATCAAGATTATTCTAC-TTCAA-GTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TACAG-TGCTTTGATTT
gi|67455 : AAATAGTAAATGAATA--TA--CTCAAAATGGAATTC--ATCATGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGGCATTTCT-------GAAAATAGTACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CACTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CGCTTTCAAAGGCAAAACAT-T--CAGTTACGTT----TCTGACATATTCAAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATGGGTATTATTCTAC-TTCAACGTATGCAAACTGACC-GGTTTGTC----T------A----GAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATT
gi|67456 : AAATAGTAAATAAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCAGG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTTCC--AAAT------TGAACAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AC-TA-TACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCCGACTTATTGGAGGA-AAAG-GTCA-ACGTTAGGCATAGAACATGTAGATTTTGTAC-CC-----TGTTTAAAAATCAAA--GGTAATAGGGATTATTCTAC-TTCAACGTATGCAAACTAACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-AT--TACATTTTATATGCTCCGCCCCT-ATCAGGAC-TGCAG-TGCTTTGATTT
gi|67457 : AAATTGTAAATAAATA--TA--CTCAAAGTCAAATTC--ATCGTGCTAGATTCGGAG----CA-------ATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCATG-AGTTGAG-TTGAA--GAAACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTTAAGTTGGACATTTGCC--AAAT------TTATGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--TAATTACATT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAATGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCTCC-ACCAGCAC-TACAG-TGCTTTGATTT
gi|67458 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAAGTC--ATCGTGCTAGATTCAGAG----CAATTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCACG-AGTTGAG-CTGTA--GAT-CAAATCTCATAT-CACTGA-TTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGTC--AAAC------TTAACAGTTG---AT----ATTCATACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----AGTATAAGAATCAAA--GGTAATCGGGATTATTCTAA-TTCAACGTATGCAAACTGACC-TGTTTATT----T------A----AAACAATAGC-GACAT-AT--TACATTTTATATACTCCGCCCCC-ATCAGCAA-TGCAG-TGGTTTGATTT
gi|67459 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTTCTAGATTCAGAG----CATTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--AATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTT----------------------------------------ACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGACAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGAATAAGAATCAAA--GGTAAACGGGATTATTTTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TACAG-TGCTTTGATT
gi|67460 : AAATAGTAAATGAATA--TATACTCAAAGTGGAAGTC--ATCGTGCTAGATTCATAG----CACTTTGATATTTTATATATGATAGAAAGCTAGTAATTCCTGAATTTAT-ATGATAGAAAGCTAGTCATTCCT-------TAATTTATCACG-AAATGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GCTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TGAACAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTAAATT---CTCTGGCTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGCAGATTT-GTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCGAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATTTAATATGCTCCGCCCTC-ATCAGCAC-TATAG-TGCTTTGATTT
gi|67461 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCA-------GAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGATGGACATTTGCC--AAAT------TTAAGGCTTG---AT----ATTCTTACT--ATA--GCAG-A---A--AA-TA-CATTTTCAAAGGCAAACCAT-T--CAGTTACATG---CTCTGAATTATTCAAGAT-AAGG-GTCA--------GCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TATATCTTAAATGCTCCACCCCC-ATCAACAC-CGCAG-TGCTTTGATTT
gi|67462 : AAATAGTTAATGAATA--TA--TGCAAAGTGAAATTC--ATCGTGCTAGATTTAGAG----CACTTT-ATATTTTATATAT--------------------------------GATAGAAAGCTTGTTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTCGAA-C-TAAAA-TCCTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCATACT--ATA--GCAG-A---A--AAATA-CACTTTCAAAGGCAAACCAT-T--CAATTACATT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTTTAC-CC-----AGTATAAGAATCAAA--AGAAATCGGGATTATTTTAC-TTCAACGTATGCAAATTGATC-TGTTTGTC----T------A----AAA-AA-AGC-GACAT-TT--TACAACTTATATGCTCCGCCCCCTATCAGCAC-GGTAG-TGTTTTGATTT
gi|67463 : AAATGGTGAATGAATA--TA--CTCAAAGTGGAATTC--ATCATGCTAGATTCAGAG----TACTTTGATATCTTATATAT--------------------------------GATAAAAAGCTTGTCATTTCT-------GAAAATATCACA-AGTTGAG-TTGAA--GATACAAATCTCATAT-CAATGA-ATTTAA-C-TTATA-TCTTGAAGTTGAACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACA--AAA--GCAG-A---A--A--TA-CACTTTCAAAAGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTTGAGAA-AAGG-CTCA-ACATTTAACATAGAATATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--AGTAATCGGGAT
gi|67463 : TC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTTctaaaacaatagcaacattttacatcttatatgctccgcccccatcagcactgcagtgctttgattt
gi|67464 : aaatggtgaatgaatatactcaaagtggaattcatcatgctagattcagagtactttgatatcttatatatgataaaaagcttgtcatttctgaaaatatcacaagttgagttgaagatacaaatctcatatcaatgaatttaacttatatcttgaagttgaacatttgccaaatttaagagttgatattcctacaaaagcagaaatacactttcaaaagcaaaccattcagttacattctctgacttatttgagaaaaggctcaacatttaacatagaatatgtagattttgtaccctgtataagaatcaaaagtaatcgggaAAACAGTAAATTAATA--AA--CTCAAAGTGGAATTTGAAT-GTGCTAGGTTTAGAG----T-TTTTGATATTTCAAATAT--------------------------------GATAAAACGCTTGACATTTTT-------GAAAATATCACGGACTTAAG-TTGTA--TATAGAAAT---ATA---AGCGA-AATAAA-C-GAATA-TGTTGGAGTAACACATTTGCC--AAAG------TTAAGAGTTATTAAC----ATTCCTACT--ATATAGCAG-ACA-A--A--TA-CACTTTCAAAACCAACACAT-T--AAGTTACCGT---ATCTGACCTATTCGAAAA-AAGG-GTCA-ACATTTAGCACAGAACATGTATATTTTGTAC-TC-----TGTATTAGAATCAAT--GGTTTTCGGGATTATTCTAC-TTCAATGTGTACAAACTGACC-TGTTTGTC----TATTACAA----AAACAACAGT-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TTGAG-TGCTTTGATT
gi|67465 : AAATATTAATTGAATA--TA--TTCAAAGTGGAATTC--ATGGTGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CAATGA-GTTGAA-C-TAATA-TCTTTAAGTTGGACATATGGC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--ACAGAA---A--A--TA-CACAATCA-----AAACCAT-T--C---TAC-TT---CT---ACTT
gi|67466 : AAATCAATAAAGA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----T-TTATGATAGAAAGCATGACATCTCT-------GAAAATATCACG-AGTAGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTACC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATATAGCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TACAG-TGCTTTGATTT
gi|67467 : tagagAAATCAATA--CAGACTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----T-TTATGATAGAAAGCATGACATCTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AGGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAA-TGTTTGTC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAT-TACAG-TGCTTTGATTT
gi|67468 : tagagAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCATG-AGTTGAG-TTGAA--GATACAAATCTCATAT-TATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGAC--AAAT------TTAAGAGTTA---AT----ATTCCTACT--ATA--GCAG-A---A--A--TT-CACTTCCAAAGGCAAACTAT-T--CAGTTACGTT---CTC-G--TTATTCCAGAA-AAGG-GTCA-ACGTTAAGCATAGAATGTGAAGATTTTGTAC-CC-----TGTATAAGGATCAAA--GGTAATCGGAATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGCC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTTCGCCCAG-ATCATCAC-TGTAG-TGCTTTGATTT
gi|67469 : AAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAGAGAGCACTTTGATATTTTATATAT--------------------------------GATAAAAAGCTTGTAATTTCT-------GAAAATATCACG-AGTCGAG-TTGAA--GATACAAATCTCATAT-CAATGA-ATTTAA-C-TTCTA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--CCAG-A---A--AA-TA-TACTTTCAAAGGCAAACAAT-T--TAGTTACATG---CTCCGACTTATTCCAGAA-AAGG-GTCA-ACGTTAAGCACAGAACGTGTA-ATTTT-TGC-CC-----TGTATATGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACTTATGCAAACTGGCC-TGTTTGTC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTACGCCCCC-ATCAGTTC-TGCAG-TGCTTTGATT
gi|67470 : AGAGAAATCA--ATCGTGCTAGATTCAGAG----CACTTTGATAT---------A---------------------------T-ATGATAGAAAGCTTGTCATTTCT-------GAAAATATTACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-TATTGA-------------------TGAAGTT-------TGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAAGCAAACCGT-T--CAGTTACACT---CTCTGACTTATCTGAGAA-AAGG--TCA-ACGTTAAGCATAGAACATGTAGAGTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCCACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCGTATATGCTCCGCCCCA-ATCAGCAC-TGGAG-TGCTTTGATTT
gi|67471 : TGCTAGGTCCAGTG----CACTTTGATATTTTACAT-T-------------------------------TGAAAAAAAGCTTGGCACTTCT-------GAAAATAATATGCAGTTGAGCTTTA----ATACTAATCTCATAT-TTTGGA-ATTGAA-CAAAATA-T-TTG-AGTTGAA
gi|67471 : AAAATAT-------TTGAG-TTGAATTGTTATACATC-CATCC-C-CTAA---TGAC-G-CAA-A-TCTTGGAGCTGAACATCCGCC--AAAT------TTGAGAGTT----ATTTCCATGCCTATT--ACAAAGCAG-ACA-A--A--TA-TACTTCCAAAGGCAACAAAT-T--CAGTTTCCTT---CTCTGCCTTATTCGAAAA-AGGG-GTAA-ACCTT--GCACAAATCATGTTAATTTTGTAC-ttgttatacatccatcccctaatgacgcaaatcttggagctgaacatccgccaaatttgagagttatttccatgcctattacaaagcagacaaatatacttccaaaggcaacaaattcagtttccttctctgccttattcgaaaaaggggtaaaccttgcacaaatcatgttaattttgtac
gi|67472 : tgctaggtccagtgcactttgatattttacatttgaaaaaaagcttggcacttctgaaaataatatgcagttgagctttaatactaatctcatattttggaattgaacTGATAGAAAACTTGGCATTTTT-------AAAAATATCATGGAGTTTAG-TTGTA---ATACAAATCTCATAT-CTTGGA-GTTGAA----AACATTCTTTGAGTTGAAC---TGTCATAAATCACATATTCAGAGTTG---A
gi|67472 : G----T-T-GTAATACAAATCT---CATATCTTGGAGTTGAAAACATTCT----TTGAG-TTGAACTGTCATAAATCACATATTCA--GA-GTTGAA-C-AGATG-TCTTGGAGTTGAACACCCATG--AAAT------TTAAAAGTTC---TTTCC-ATGTCTACT--ATATAGCAG-ACAAATCA--TG-CACTTATAAAGGCAACACAT-T--CCGTTACCTT---CTCTGCCTTATTacagatgtcttggagttgaacacccatgaaatttaaaagttctttccatgtctactatatagcagacaaatcatgcacttataaaggcaacacattccgttaccttctctgccttatt
gi|67473 : tgatagaaaacttggcatttttaaaaatatcatggagtttaATTTCT-------GAAA-TATCATGGAGTTGAA-CTGAA---ATACAAATCACATAT-CTTGGC-ATTGAT-C-ACATATTTTTTTAGTTGAAC---TGCC--A
gi|67474 : G-AGTTGAG-TTGAA--GATACAAGTCTCATAT-CATTGA-GTTGAT-C-TTATA-TCTTGAAGTTAGACATTTGCC--AAAT------TTAAGAGATG---AT----ATTCCTACT--ATA--GCAG-A---A--A--AAACACATTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTAGTCGAGAA-AAGG-GTCT-ATATCAAGCATAGAGCATGCAGATTTTGTAAACC-----TGTATAAGAATCAAA--GGTAATAGGGAGTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACTT-TT--TACATCTTATATGCTCCGCCGCC-ATCAGCAC-TGTAG-TCCTTTGATTT
gi|67475 : TAT-CATGGCTGTTGAATC-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAACAGTTG---AT----ATTCCTACT--GTA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTGTGTAC-CC-----TGTATAAGAATCAAATTTATAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTT----T------A----AAACAATAGC-AACAT-TT--TACATTTTATATGCTCCGCCCCC-ATCAGCAC-ACTAG-TGCTTTGATTT
gi|67476 : TTTAG-C-TAATA-TCTTGAAGTTCGACAATTGCC--AAAT------TTAAGAGTTG---CT----TTTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGAAAACCAT-T--CAGTTACATG---CTCTGATTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAAATTTTGTTC-CC-----TGTATAAGAACCAAA--TGTAATCGGGGTTATTCTAC-TTCAACGTATGCCAACTGACC-TGTTTGTC----T------A----AAACAATAGT-GACAT-TT--TACATCTTATTTGCTTCG-CACC-ATTAGCAC-TGTAA-GGCTTTGATT
gi|67477 : ATATTTCAC--AAAG------TCTAGAGTTATA-ATC---ATGCCTACTTCATA--TCAC-ATG-G--C--TT-CTCTTTCAA--------CAT-TTTCAGTTTCCTT---CTCCGACCTATGCGAAAA-AAAATGCCATTCCTTAAGCATGAAACAATTTGATTTTGC-C-CCTTAATTGTGTTTAAATCACT--TGCAGCAGGGCTTAT--TACATTTAATG-------AGTGAC----------------------------ACAACAGT-GCCAT-TTAAAAAATCTGCCACTCTCTGCCCCC-TTCAGTACTTTTAG-TGCTTTTATTT
gi|67478 : --A--TA-CATTTTCAAAGGGAAACAATCT--AAGTTACCTTCTCCTCTGATTTATTCGAAAATATGG-GCCA-ACTTT--GCACAGAA-----------TGTAC-CA-----TGCATTAG---CAA-----TACTCG---------------CAACG-GTACAAACTGGAC-TTCTTGTT----T------ATTACAAAAAAAACCTAACATGTT--CACATCTTGCACGTTCCGCCCCA-AT-AGTAC-TTCTGATGCTTTGATTT
gi|67479 : TTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
gi|67480 : TATGTAAAC-GACCCTGCATGTCCACAT------A----AAACAAGGTC-AACAT-TT--TACATCTTCCCTGCT----CCCT-TTCAGTACTTAAAG-TGCTTTGATT
Alignments
lowQualScore : 77777777777777777777777777777777 11
lowQualScore : 22 55 22 3333 22222222222222222222222222222222 1 5555555 5 1 44 1 1 1 1 2 11 444444 444 7777 22 88 1 888 22 44 1 1 22 3 7777 1 1 1 1 44444 22 1 1 3333 444444 3333 1 1 22 1 3 1
lowQualScore : .. .. .. .... ................................ . ....... . . .. . . . . . .. ...... ... .... .. .. . ... .. .. . . .. . .... . . . . ..... .. . . .... ...... .... . . .. . . .
lowQualScore : 88 55 66 9999 77777777777777777777777777777777 6 2222222 9 5 11 4 4 4 4 8 99 111111 555 2222 00 11 5 777 00 88 4 4 00 7 7777 5 5 5 5 00000 22 6 5 1111 333333 1111 5 5 00 5 0 5
consensus : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-T-ATGATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
Reference ( family-628 ) : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-T-ATGATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
gi|67450 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGTTTGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCACG-AGTTACG-CTGAA--GGTACAAATCTCGTAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGAGTTTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAATGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGAAG-TGCTTTGATTT
gi|67451 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTAATATATA------------------CTG----TAT-ATGATAGAAAACTTGGCATTTAT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CACTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCTTATT--AAA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTTTTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TATAG-TGCTTTGATT
gi|67452 : AAGTAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAATCTTGGTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAC-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTATATTCCGTAC-CA-----CGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACATATGCAAACGGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTG
gi|67453 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--CATACAAATCTCATAT-AATTGA-GCTGAC-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAATAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGTCAAACAAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCGTAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCAGCGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GATAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATT
gi|67454 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGATATTTTATATATA------------------CTG----T-TTATGATAGAAAGCTTGGCATCTCT-------GAAAATAT---------GAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ATGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGGAACAAA--GGTAATCAAGATTATTCTAC-TTCAA-GTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TACAG-TGCTTTGATTT
gi|67455 : AAATAGTAAATGAATA--TA--CTCAAAATGGAATTC--ATCATGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGGCATTTCT-------GAAAATAGTACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CACTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CGCTTTCAAAGGCAAAACAT-T--CAGTTACGTT----TCTGACATATTCAAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATGGGTATTATTCTAC-TTCAACGTATGCAAACTGACC-GGTTTGTC----T------A----GAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATT
gi|67456 : AAATAGTAAATAAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCAGG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTTCC--AAAT------TGAACAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AC-TA-TACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCCGACTTATTGGAGGA-AAAG-GTCA-ACGTTAGGCATAGAACATGTAGATTTTGTAC-CC-----TGTTTAAAAATCAAA--GGTAATAGGGATTATTCTAC-TTCAACGTATGCAAACTAACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-AT--TACATTTTATATGCTCCGCCCCT-ATCAGGAC-TGCAG-TGCTTTGATTT
gi|67457 : AAATTGTAAATAAATA--TA--CTCAAAGTCAAATTC--ATCGTGCTAGATTCGGAG----CA-------ATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCATG-AGTTGAG-TTGAA--GAAACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTTAAGTTGGACATTTGCC--AAAT------TTATGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--TAATTACATT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAATGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCTCC-ACCAGCAC-TACAG-TGCTTTGATTT
gi|67458 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAAGTC--ATCGTGCTAGATTCAGAG----CAATTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCACG-AGTTGAG-CTGTA--GAT-CAAATCTCATAT-CACTGA-TTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGTC--AAAC------TTAACAGTTG---AT----ATTCATACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----AGTATAAGAATCAAA--GGTAATCGGGATTATTCTAA-TTCAACGTATGCAAACTGACC-TGTTTATT----T------A----AAACAATAGC-GACAT-AT--TACATTTTATATACTCCGCCCCC-ATCAGCAA-TGCAG-TGGTTTGATTT
gi|67459 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTTCTAGATTCAGAG----CATTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--AATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTT----------------------------------------ACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGACAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGAATAAGAATCAAA--GGTAAACGGGATTATTTTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TACAG-TGCTTTGATT
gi|67460 : AAATAGTAAATGAATA--TATACTCAAAGTGGAAGTC--ATCGTGCTAGATTCATAG----CACTTTGATATTTTATATATGATAGAAAGCTAGTAATTCCTGAATTTAT-ATGATAGAAAGCTAGTCATTCCT-------TAATTTATCACG-AAATGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GCTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TGAACAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTAAATT---CTCTGGCTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGCAGATTT-GTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCGAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATTTAATATGCTCCGCCCTC-ATCAGCAC-TATAG-TGCTTTGATTT
gi|67461 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCA-------GAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGATGGACATTTGCC--AAAT------TTAAGGCTTG---AT----ATTCTTACT--ATA--GCAG-A---A--AA-TA-CATTTTCAAAGGCAAACCAT-T--CAGTTACATG---CTCTGAATTATTCAAGAT-AAGG-GTCA--------GCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TATATCTTAAATGCTCCACCCCC-ATCAACAC-CGCAG-TGCTTTGATTT
gi|67462 : AAATAGTTAATGAATA--TA--TGCAAAGTGAAATTC--ATCGTGCTAGATTTAGAG----CACTTT-ATATTTTATATAT--------------------------------GATAGAAAGCTTGTTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTCGAA-C-TAAAA-TCCTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCATACT--ATA--GCAG-A---A--AAATA-CACTTTCAAAGGCAAACCAT-T--CAATTACATT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTTTAC-CC-----AGTATAAGAATCAAA--AGAAATCGGGATTATTTTAC-TTCAACGTATGCAAATTGATC-TGTTTGTC----T------A----AAA-AA-AGC-GACAT-TT--TACAACTTATATGCTCCGCCCCCTATCAGCAC-GGTAG-TGTTTTGATTT
gi|67463 : AAATGGTGAATGAATA--TA--CTCAAAGTGGAATTC--ATCATGCTAGATTCAGAG----TACTTTGATATCTTATATAT--------------------------------GATAAAAAGCTTGTCATTTCT-------GAAAATATCACA-AGTTGAG-TTGAA--GATACAAATCTCATAT-CAATGA-ATTTAA-C-TTATA-TCTTGAAGTTGAACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACA--AAA--GCAG-A---A--A--TA-CACTTTCAAAAGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTTGAGAA-AAGG-CTCA-ACATTTAACATAGAATATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--AGTAATCGGGAT
gi|67463 : TC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTTctaaaacaatagcaacattttacatcttatatgctccgcccccatcagcactgcagtgctttgattt
gi|67464 : aaatggtgaatgaatatactcaaagtggaattcatcatgctagattcagagtactttgatatcttatatatgataaaaagcttgtcatttctgaaaatatcacaagttgagttgaagatacaaatctcatatcaatgaatttaacttatatcttgaagttgaacatttgccaaatttaagagttgatattcctacaaaagcagaaatacactttcaaaagcaaaccattcagttacattctctgacttatttgagaaaaggctcaacatttaacatagaatatgtagattttgtaccctgtataagaatcaaaagtaatcgggaAAACAGTAAATTAATA--AA--CTCAAAGTGGAATTTGAAT-GTGCTAGGTTTAGAG----T-TTTTGATATTTCAAATAT--------------------------------GATAAAACGCTTGACATTTTT-------GAAAATATCACGGACTTAAG-TTGTA--TATAGAAAT---ATA---AGCGA-AATAAA-C-GAATA-TGTTGGAGTAACACATTTGCC--AAAG------TTAAGAGTTATTAAC----ATTCCTACT--ATATAGCAG-ACA-A--A--TA-CACTTTCAAAACCAACACAT-T--AAGTTACCGT---ATCTGACCTATTCGAAAA-AAGG-GTCA-ACATTTAGCACAGAACATGTATATTTTGTAC-TC-----TGTATTAGAATCAAT--GGTTTTCGGGATTATTCTAC-TTCAATGTGTACAAACTGACC-TGTTTGTC----TATTACAA----AAACAACAGT-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TTGAG-TGCTTTGATT
gi|67465 : AAATATTAATTGAATA--TA--TTCAAAGTGGAATTC--ATGGTGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CAATGA-GTTGAA-C-TAATA-TCTTTAAGTTGGACATATGGC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--ACAGAA---A--A--TA-CACAATCA-----AAACCAT-T--C---TAC-TT---CT---ACTT
gi|67466 : AAATCAATAAAGA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----T-TTATGATAGAAAGCATGACATCTCT-------GAAAATATCACG-AGTAGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTACC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATATAGCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TACAG-TGCTTTGATTT
gi|67467 : tagagAAATCAATA--CAGACTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----T-TTATGATAGAAAGCATGACATCTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AGGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAA-TGTTTGTC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAT-TACAG-TGCTTTGATTT
gi|67468 : tagagAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCATG-AGTTGAG-TTGAA--GATACAAATCTCATAT-TATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGAC--AAAT------TTAAGAGTTA---AT----ATTCCTACT--ATA--GCAG-A---A--A--TT-CACTTCCAAAGGCAAACTAT-T--CAGTTACGTT---CTC-G--TTATTCCAGAA-AAGG-GTCA-ACGTTAAGCATAGAATGTGAAGATTTTGTAC-CC-----TGTATAAGGATCAAA--GGTAATCGGAATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGCC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTTCGCCCAG-ATCATCAC-TGTAG-TGCTTTGATTT
gi|67469 : AAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAGAGAGCACTTTGATATTTTATATAT--------------------------------GATAAAAAGCTTGTAATTTCT-------GAAAATATCACG-AGTCGAG-TTGAA--GATACAAATCTCATAT-CAATGA-ATTTAA-C-TTCTA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--CCAG-A---A--AA-TA-TACTTTCAAAGGCAAACAAT-T--TAGTTACATG---CTCCGACTTATTCCAGAA-AAGG-GTCA-ACGTTAAGCACAGAACGTGTA-ATTTT-TGC-CC-----TGTATATGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACTTATGCAAACTGGCC-TGTTTGTC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTACGCCCCC-ATCAGTTC-TGCAG-TGCTTTGATT
gi|67470 : AGAGAAATCA--ATCGTGCTAGATTCAGAG----CACTTTGATAT---------A---------------------------T-ATGATAGAAAGCTTGTCATTTCT-------GAAAATATTACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-TATTGA-------------------TGAAGTT-------TGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAAGCAAACCGT-T--CAGTTACACT---CTCTGACTTATCTGAGAA-AAGG--TCA-ACGTTAAGCATAGAACATGTAGAGTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCCACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCGTATATGCTCCGCCCCA-ATCAGCAC-TGGAG-TGCTTTGATTT
gi|67471 : TGCTAGGTCCAGTG----CACTTTGATATTTTACAT-T-------------------------------TGAAAAAAAGCTTGGCACTTCT-------GAAAATAATATGCAGTTGAGCTTTA----ATACTAATCTCATAT-TTTGGA-ATTGAA-CAAAATA-T-TTG-AGTTGAA
gi|67471 : AAAATAT-------TTGAG-TTGAATTGTTATACATC-CATCC-C-CTAA---TGAC-G-CAA-A-TCTTGGAGCTGAACATCCGCC--AAAT------TTGAGAGTT----ATTTCCATGCCTATT--ACAAAGCAG-ACA-A--A--TA-TACTTCCAAAGGCAACAAAT-T--CAGTTTCCTT---CTCTGCCTTATTCGAAAA-AGGG-GTAA-ACCTT--GCACAAATCATGTTAATTTTGTAC-ttgttatacatccatcccctaatgacgcaaatcttggagctgaacatccgccaaatttgagagttatttccatgcctattacaaagcagacaaatatacttccaaaggcaacaaattcagtttccttctctgccttattcgaaaaaggggtaaaccttgcacaaatcatgttaattttgtac
gi|67472 : tgctaggtccagtgcactttgatattttacatttgaaaaaaagcttggcacttctgaaaataatatgcagttgagctttaatactaatctcatattttggaattgaacTGATAGAAAACTTGGCATTTTT-------AAAAATATCATGGAGTTTAG-TTGTA---ATACAAATCTCATAT-CTTGGA-GTTGAA----AACATTCTTTGAGTTGAAC---TGTCATAAATCACATATTCAGAGTTG---A
gi|67472 : G----T-T-GTAATACAAATCT---CATATCTTGGAGTTGAAAACATTCT----TTGAG-TTGAACTGTCATAAATCACATATTCA--GA-GTTGAA-C-AGATG-TCTTGGAGTTGAACACCCATG--AAAT------TTAAAAGTTC---TTTCC-ATGTCTACT--ATATAGCAG-ACAAATCA--TG-CACTTATAAAGGCAACACAT-T--CCGTTACCTT---CTCTGCCTTATTacagatgtcttggagttgaacacccatgaaatttaaaagttctttccatgtctactatatagcagacaaatcatgcacttataaaggcaacacattccgttaccttctctgccttatt
gi|67473 : tgatagaaaacttggcatttttaaaaatatcatggagtttaATTTCT-------GAAA-TATCATGGAGTTGAA-CTGAA---ATACAAATCACATAT-CTTGGC-ATTGAT-C-ACATATTTTTTTAGTTGAAC---TGCC--A
gi|67474 : G-AGTTGAG-TTGAA--GATACAAGTCTCATAT-CATTGA-GTTGAT-C-TTATA-TCTTGAAGTTAGACATTTGCC--AAAT------TTAAGAGATG---AT----ATTCCTACT--ATA--GCAG-A---A--A--AAACACATTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTAGTCGAGAA-AAGG-GTCT-ATATCAAGCATAGAGCATGCAGATTTTGTAAACC-----TGTATAAGAATCAAA--GGTAATAGGGAGTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACTT-TT--TACATCTTATATGCTCCGCCGCC-ATCAGCAC-TGTAG-TCCTTTGATTT
gi|67475 : TAT-CATGGCTGTTGAATC-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAACAGTTG---AT----ATTCCTACT--GTA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTGTGTAC-CC-----TGTATAAGAATCAAATTTATAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTT----T------A----AAACAATAGC-AACAT-TT--TACATTTTATATGCTCCGCCCCC-ATCAGCAC-ACTAG-TGCTTTGATTT
gi|67476 : TTTAG-C-TAATA-TCTTGAAGTTCGACAATTGCC--AAAT------TTAAGAGTTG---CT----TTTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGAAAACCAT-T--CAGTTACATG---CTCTGATTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAAATTTTGTTC-CC-----TGTATAAGAACCAAA--TGTAATCGGGGTTATTCTAC-TTCAACGTATGCCAACTGACC-TGTTTGTC----T------A----AAACAATAGT-GACAT-TT--TACATCTTATTTGCTTCG-CACC-ATTAGCAC-TGTAA-GGCTTTGATT
gi|67477 : ATATTTCAC--AAAG------TCTAGAGTTATA-ATC---ATGCCTACTTCATA--TCAC-ATG-G--C--TT-CTCTTTCAA--------CAT-TTTCAGTTTCCTT---CTCCGACCTATGCGAAAA-AAAATGCCATTCCTTAAGCATGAAACAATTTGATTTTGC-C-CCTTAATTGTGTTTAAATCACT--TGCAGCAGGGCTTAT--TACATTTAATG-------AGTGAC----------------------------ACAACAGT-GCCAT-TTAAAAAATCTGCCACTCTCTGCCCCC-TTCAGTACTTTTAG-TGCTTTTATTT
gi|67478 : --A--TA-CATTTTCAAAGGGAAACAATCT--AAGTTACCTTCTCCTCTGATTTATTCGAAAATATGG-GCCA-ACTTT--GCACAGAA-----------TGTAC-CA-----TGCATTAG---CAA-----TACTCG---------------CAACG-GTACAAACTGGAC-TTCTTGTT----T------ATTACAAAAAAAACCTAACATGTT--CACATCTTGCACGTTCCGCCCCA-AT-AGTAC-TTCTGATGCTTTGATTT
gi|67479 : TTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
gi|67480 : TATGTAAAC-GACCCTGCATGTCCACAT------A----AAACAAGGTC-AACAT-TT--TACATCTTCCCTGCT----CCCT-TTCAGTACTTAAAG-TGCTTTGATT
blockSeqs : AA TA GA AGAG GATAGAAAGCTAGTAATTCCTGAATTTATAT G TGGAGTT G C TT T T T A T AT CACATA TTA TTCC TC TA A CAA TC AA A C TT A CTCC T T T A TTAAT TT A C CACA ATTACA TTAC T G AA T T A
blockSeqs : . GA . . ACTGTATAT G . C . CT . . . . T . . TA TCC . TA . CA . C . . . G C . . . . . . . . . . . . . . . T .
blockSeqs : . . . . ACTGTATAT G . G . . . . . . . . . . C . AA . CA . A . . . G C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . ACTGTATAT G . G . . . . . . . . . . . . TA . TG . A . . . G C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . ACTGTTTAT G . . . . . . . . . . . . . . . . . . A . . . G C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . ACTGTATAT T . . . . . . . . . . . . . . . . . . A . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . ACTGTTTAT T . . . . . . . . . . . . . . . . . . A . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . ACTGTTTAT T . . . . . . . . . . . . . . . . . . A . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . ACTGTATAT G . . . . . . . . . . . . . . . . . . A . . . G A . . . . . . . . . . . . . . . . .
blockSeqs : . . . . ATAT T . . . . . . . . . . . . . . . . . . A . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . T T . . . . . . . . . . . . . . . . . . . . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . T . . . . . . . . . . . . . . . . . . . . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . T . . . . . . . . . . . . . . . . . . . . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . . . . . . . . . . . . . . . . . . C C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . T . . . . . . . . . . . . . . . . . . . . . . G C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . . . . . . . . . . . . . . . . . . G C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . . . . . . . . . . . . . . . . . . G C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . G . . . . . . . . . . . . . . . . . . . . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . T . . . . . . . . . . . . . . . . . . . . . . A C . . . . . . . . . . . . . . . . .
blockSeqs : . . . T . . . . . . . . . . . . . . . . . . . . . . C . . . . . . . . . . . . . . . . . .
blockSeqs : . . G . . . . . . . . . . . . . . . . . . . . . . C . . . . . . . . . . . . . . . . . .
blockSeqs : G . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . C . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . C . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . .
blockSeqs : . . . .
blockSeqCons : ACTGTTAT************************
originalCons : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-T-ATGATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
finalCons : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATACTGTTAT------------------------GATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
Alignments
lowQualScore : 77777777777777777777777777777777 11
lowQualScore : 22 55 22 3333 22222222222222222222222222222222 1 5555555 5 1 44 1 1 1 1 2 11 444444 444 7777 22 88 1 888 22 44 1 1 22 3 7777 1 1 1 1 44444 22 1 1 3333 444444 3333 1 1 22 1 3 1
lowQualScore : .. .. .. .... ................................ . ....... . . .. . . . . . .. ...... ... .... .. .. . ... .. .. . . .. . .... . . . . ..... .. . . .... ...... .... . . .. . . .
lowQualScore : 88 55 66 9999 77777777777777777777777777777777 6 2222222 9 5 11 4 4 4 4 8 99 111111 555 2222 00 11 5 777 00 88 4 4 00 7 7777 5 5 5 5 00000 22 6 5 1111 333333 1111 5 5 00 5 0 5
consensus : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-T-ATGATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
Reference ( family-628 ) : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----T-T-ATGATAGAAAGCTTGNCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
gi|67450 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGTTTGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCACG-AGTTACG-CTGAA--GGTACAAATCTCGTAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGAGTTTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAATGCAAACCAT-T--CAGTTACGTT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGAAG-TGCTTTGATTT
gi|67451 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTAATATATA------------------CTG----TAT-ATGATAGAAAACTTGGCATTTAT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CACTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCTTATT--AAA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTTTTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TATAG-TGCTTTGATT
gi|67452 : AAGTAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAATCTTGGTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAC-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTATATTCCGTAC-CA-----CGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACATATGCAAACGGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTG
gi|67453 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--CATACAAATCTCATAT-AATTGA-GCTGAC-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAATAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGTCAAACAAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCGTAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCAGCGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GATAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATT
gi|67454 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGATATTTTATATATA------------------CTG----T-TTATGATAGAAAGCTTGGCATCTCT-------GAAAATAT---------GAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ATGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGGAACAAA--GGTAATCAAGATTATTCTAC-TTCAA-GTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TACAG-TGCTTTGATTT
gi|67455 : AAATAGTAAATGAATA--TA--CTCAAAATGGAATTC--ATCATGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGGCATTTCT-------GAAAATAGTACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CACTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CGCTTTCAAAGGCAAAACAT-T--CAGTTACGTT----TCTGACATATTCAAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATGGGTATTATTCTAC-TTCAACGTATGCAAACTGACC-GGTTTGTC----T------A----GAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATT
gi|67456 : AAATAGTAAATAAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCAGG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTTCC--AAAT------TGAACAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AC-TA-TACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCCGACTTATTGGAGGA-AAAG-GTCA-ACGTTAGGCATAGAACATGTAGATTTTGTAC-CC-----TGTTTAAAAATCAAA--GGTAATAGGGATTATTCTAC-TTCAACGTATGCAAACTAACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-AT--TACATTTTATATGCTCCGCCCCT-ATCAGGAC-TGCAG-TGCTTTGATTT
gi|67457 : AAATTGTAAATAAATA--TA--CTCAAAGTCAAATTC--ATCGTGCTAGATTCGGAG----CA-------ATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCATG-AGTTGAG-TTGAA--GAAACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTTAAGTTGGACATTTGCC--AAAT------TTATGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--TAATTACATT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAATGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCTCC-ACCAGCAC-TACAG-TGCTTTGATTT
gi|67458 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAAGTC--ATCGTGCTAGATTCAGAG----CAATTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCACG-AGTTGAG-CTGTA--GAT-CAAATCTCATAT-CACTGA-TTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGTC--AAAC------TTAACAGTTG---AT----ATTCATACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTGTAC-CC-----AGTATAAGAATCAAA--GGTAATCGGGATTATTCTAA-TTCAACGTATGCAAACTGACC-TGTTTATT----T------A----AAACAATAGC-GACAT-AT--TACATTTTATATACTCCGCCCCC-ATCAGCAA-TGCAG-TGGTTTGATTT
gi|67459 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTTCTAGATTCAGAG----CATTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--AATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTT----------------------------------------ACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGACAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATAGAACATGTAGATTCTGTAC-CA-----TGAATAAGAATCAAA--GGTAAACGGGATTATTTTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TACAG-TGCTTTGATT
gi|67460 : AAATAGTAAATGAATA--TATACTCAAAGTGGAAGTC--ATCGTGCTAGATTCATAG----CACTTTGATATTTTATATATGATAGAAAGCTAGTAATTCCTGAATTTAT-ATGATAGAAAGCTAGTCATTCCT-------TAATTTATCACG-AAATGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GCTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TGAACAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTAAATT---CTCTGGCTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGCAGATTT-GTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCGAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATTTAATATGCTCCGCCCTC-ATCAGCAC-TATAG-TGCTTTGATTT
gi|67461 : AAATAGTAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCA-------GAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGATGGACATTTGCC--AAAT------TTAAGGCTTG---AT----ATTCTTACT--ATA--GCAG-A---A--AA-TA-CATTTTCAAAGGCAAACCAT-T--CAGTTACATG---CTCTGAATTATTCAAGAT-AAGG-GTCA--------GCATAGAACATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TATATCTTAAATGCTCCACCCCC-ATCAACAC-CGCAG-TGCTTTGATTT
gi|67462 : AAATAGTTAATGAATA--TA--TGCAAAGTGAAATTC--ATCGTGCTAGATTTAGAG----CACTTT-ATATTTTATATAT--------------------------------GATAGAAAGCTTGTTATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTCGAA-C-TAAAA-TCCTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCATACT--ATA--GCAG-A---A--AAATA-CACTTTCAAAGGCAAACCAT-T--CAATTACATT---CTCTGACTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTTTTTAC-CC-----AGTATAAGAATCAAA--AGAAATCGGGATTATTTTAC-TTCAACGTATGCAAATTGATC-TGTTTGTC----T------A----AAA-AA-AGC-GACAT-TT--TACAACTTATATGCTCCGCCCCCTATCAGCAC-GGTAG-TGTTTTGATTT
gi|67463 : AAATGGTGAATGAATA--TA--CTCAAAGTGGAATTC--ATCATGCTAGATTCAGAG----TACTTTGATATCTTATATAT--------------------------------GATAAAAAGCTTGTCATTTCT-------GAAAATATCACA-AGTTGAG-TTGAA--GATACAAATCTCATAT-CAATGA-ATTTAA-C-TTATA-TCTTGAAGTTGAACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACA--AAA--GCAG-A---A--A--TA-CACTTTCAAAAGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTTGAGAA-AAGG-CTCA-ACATTTAACATAGAATATGTAGATTTTGTAC-CC-----TGTATAAGAATCAAA--AGTAATCGGGAT
gi|67463 : TC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTTctaaaacaatagcaacattttacatcttatatgctccgcccccatcagcactgcagtgctttgattt
gi|67464 : aaatggtgaatgaatatactcaaagtggaattcatcatgctagattcagagtactttgatatcttatatatgataaaaagcttgtcatttctgaaaatatcacaagttgagttgaagatacaaatctcatatcaatgaatttaacttatatcttgaagttgaacatttgccaaatttaagagttgatattcctacaaaagcagaaatacactttcaaaagcaaaccattcagttacattctctgacttatttgagaaaaggctcaacatttaacatagaatatgtagattttgtaccctgtataagaatcaaaagtaatcgggaAAACAGTAAATTAATA--AA--CTCAAAGTGGAATTTGAAT-GTGCTAGGTTTAGAG----T-TTTTGATATTTCAAATAT--------------------------------GATAAAACGCTTGACATTTTT-------GAAAATATCACGGACTTAAG-TTGTA--TATAGAAAT---ATA---AGCGA-AATAAA-C-GAATA-TGTTGGAGTAACACATTTGCC--AAAG------TTAAGAGTTATTAAC----ATTCCTACT--ATATAGCAG-ACA-A--A--TA-CACTTTCAAAACCAACACAT-T--AAGTTACCGT---ATCTGACCTATTCGAAAA-AAGG-GTCA-ACATTTAGCACAGAACATGTATATTTTGTAC-TC-----TGTATTAGAATCAAT--GGTTTTCGGGATTATTCTAC-TTCAATGTGTACAAACTGACC-TGTTTGTC----TATTACAA----AAACAACAGT-GACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGTAC-TTGAG-TGCTTTGATT
gi|67465 : AAATATTAATTGAATA--TA--TTCAAAGTGGAATTC--ATGGTGCTAGATTCAGAG----CACTTTGATATTTTATATAT--------------------------------GATAGAAAGCTTGTCATTTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CAATGA-GTTGAA-C-TAATA-TCTTTAAGTTGGACATATGGC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--ACAGAA---A--A--TA-CACAATCA-----AAACCAT-T--C---TAC-TT---CT---ACTT
gi|67466 : AAATCAATAAAGA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----T-TTATGATAGAAAGCATGACATCTCT-------GAAAATATCACG-AGTAGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTACC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATATAGCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AAGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TACAG-TGCTTTGATTT
gi|67467 : tagagAAATCAATA--CAGACTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----TACTTTGCTATTTTATATATA------------------CTG----T-TTATGATAGAAAGCATGACATCTCT-------GAAAATATCACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-CATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAAAGTTA---AT----ATTCTTACT--ATA--GCAG-A---A--A--TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACGTT----TCTGACATATTCGAGAA-AGGA-GTCA-ACGTTAAGCATATAACATGTAGATTCTGTAC-CA-----TGTATAAGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGAAA-TGTTTGTC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTCCGCCCCC-ATCAGCAT-TACAG-TGCTTTGATTT
gi|67468 : tagagAAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAGATTCAGAG----CACTTTGATATTTTATATATA------------------CTG----TAT-ATGATAGAAAGCTTGGCATTTCT-------GAAAATATCATG-AGTTGAG-TTGAA--GATACAAATCTCATAT-TATTGA-GTTGAA-C-TAATA-TCTTGAAGTTGGACATTTGAC--AAAT------TTAAGAGTTA---AT----ATTCCTACT--ATA--GCAG-A---A--A--TT-CACTTCCAAAGGCAAACTAT-T--CAGTTACGTT---CTC-G--TTATTCCAGAA-AAGG-GTCA-ACGTTAAGCATAGAATGTGAAGATTTTGTAC-CC-----TGTATAAGGATCAAA--GGTAATCGGAATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGCC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTTCGCCCAG-ATCATCAC-TGTAG-TGCTTTGATTT
gi|67469 : AAATGAATA--TA--CTCAAAGTGGAATTC--ATCGTGCTAAATTCAGAGAGAGCACTTTGATATTTTATATAT--------------------------------GATAAAAAGCTTGTAATTTCT-------GAAAATATCACG-AGTCGAG-TTGAA--GATACAAATCTCATAT-CAATGA-ATTTAA-C-TTCTA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--CCAG-A---A--AA-TA-TACTTTCAAAGGCAAACAAT-T--TAGTTACATG---CTCCGACTTATTCCAGAA-AAGG-GTCA-ACGTTAAGCACAGAACGTGTA-ATTTT-TGC-CC-----TGTATATGAATCAAA--GGTAATCGGGATTATTCTAC-TTCAACTTATGCAAACTGGCC-TGTTTGTC----T------A----AAACAATAGC-AACAT-TT--TACATCTTATATGCTACGCCCCC-ATCAGTTC-TGCAG-TGCTTTGATT
gi|67470 : AGAGAAATCA--ATCGTGCTAGATTCAGAG----CACTTTGATAT---------A---------------------------T-ATGATAGAAAGCTTGTCATTTCT-------GAAAATATTACG-AGTTGAG-TTGAA--GATACAAATCTCATAT-TATTGA-------------------TGAAGTT-------TGCC--AAAT------TTAAGAGTTG---AT----ATTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAAGCAAACCGT-T--CAGTTACACT---CTCTGACTTATCTGAGAA-AAGG--TCA-ACGTTAAGCATAGAACATGTAGAGTTTGTAC-CC-----TGTATAAGAATCAAA--GGTAATTGGGATTATTCTAC-TTCCACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCGTATATGCTCCGCCCCA-ATCAGCAC-TGGAG-TGCTTTGATTT
gi|67471 : TGCTAGGTCCAGTG----CACTTTGATATTTTACAT-T-------------------------------TGAAAAAAAGCTTGGCACTTCT-------GAAAATAATATGCAGTTGAGCTTTA----ATACTAATCTCATAT-TTTGGA-ATTGAA-CAAAATA-T-TTG-AGTTGAA
gi|67471 : AAAATAT-------TTGAG-TTGAATTGTTATACATC-CATCC-C-CTAA---TGAC-G-CAA-A-TCTTGGAGCTGAACATCCGCC--AAAT------TTGAGAGTT----ATTTCCATGCCTATT--ACAAAGCAG-ACA-A--A--TA-TACTTCCAAAGGCAACAAAT-T--CAGTTTCCTT---CTCTGCCTTATTCGAAAA-AGGG-GTAA-ACCTT--GCACAAATCATGTTAATTTTGTAC-ttgttatacatccatcccctaatgacgcaaatcttggagctgaacatccgccaaatttgagagttatttccatgcctattacaaagcagacaaatatacttccaaaggcaacaaattcagtttccttctctgccttattcgaaaaaggggtaaaccttgcacaaatcatgttaattttgtac
gi|67472 : tgctaggtccagtgcactttgatattttacatttgaaaaaaagcttggcacttctgaaaataatatgcagttgagctttaatactaatctcatattttggaattgaacTGATAGAAAACTTGGCATTTTT-------AAAAATATCATGGAGTTTAG-TTGTA---ATACAAATCTCATAT-CTTGGA-GTTGAA----AACATTCTTTGAGTTGAAC---TGTCATAAATCACATATTCAGAGTTG---A
gi|67472 : G----T-T-GTAATACAAATCT---CATATCTTGGAGTTGAAAACATTCT----TTGAG-TTGAACTGTCATAAATCACATATTCA--GA-GTTGAA-C-AGATG-TCTTGGAGTTGAACACCCATG--AAAT------TTAAAAGTTC---TTTCC-ATGTCTACT--ATATAGCAG-ACAAATCA--TG-CACTTATAAAGGCAACACAT-T--CCGTTACCTT---CTCTGCCTTATTacagatgtcttggagttgaacacccatgaaatttaaaagttctttccatgtctactatatagcagacaaatcatgcacttataaaggcaacacattccgttaccttctctgccttatt
gi|67473 : tgatagaaaacttggcatttttaaaaatatcatggagtttaATTTCT-------GAAA-TATCATGGAGTTGAA-CTGAA---ATACAAATCACATAT-CTTGGC-ATTGAT-C-ACATATTTTTTTAGTTGAAC---TGCC--A
gi|67474 : G-AGTTGAG-TTGAA--GATACAAGTCTCATAT-CATTGA-GTTGAT-C-TTATA-TCTTGAAGTTAGACATTTGCC--AAAT------TTAAGAGATG---AT----ATTCCTACT--ATA--GCAG-A---A--A--AAACACATTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTAGTCGAGAA-AAGG-GTCT-ATATCAAGCATAGAGCATGCAGATTTTGTAAACC-----TGTATAAGAATCAAA--GGTAATAGGGAGTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACTT-TT--TACATCTTATATGCTCCGCCGCC-ATCAGCAC-TGTAG-TCCTTTGATTT
gi|67475 : TAT-CATGGCTGTTGAATC-TAATA-TCTTGAAGTTGGACATTTGCC--AAAT------TTAACAGTTG---AT----ATTCCTACT--GTA--GCAG-A---A--AA-TA-CACTTTCAAAGGCAAACCAT-T--CAGTTACATT---CTCTGACTTATTCGAGGA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAGATTGTGTAC-CC-----TGTATAAGAATCAAATTTATAATCGGGATTATTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTT----T------A----AAACAATAGC-AACAT-TT--TACATTTTATATGCTCCGCCCCC-ATCAGCAC-ACTAG-TGCTTTGATTT
gi|67476 : TTTAG-C-TAATA-TCTTGAAGTTCGACAATTGCC--AAAT------TTAAGAGTTG---CT----TTTCCTACT--ATA--GCAG-A---A--AA-TA-CACTTTCAAAGGAAAACCAT-T--CAGTTACATG---CTCTGATTTATTCGAGAA-AAGG-GTCA-ACGTTAAGCATAGAACATGTAAATTTTGTTC-CC-----TGTATAAGAACCAAA--TGTAATCGGGGTTATTCTAC-TTCAACGTATGCCAACTGACC-TGTTTGTC----T------A----AAACAATAGT-GACAT-TT--TACATCTTATTTGCTTCG-CACC-ATTAGCAC-TGTAA-GGCTTTGATT
gi|67477 : ATATTTCAC--AAAG------TCTAGAGTTATA-ATC---ATGCCTACTTCATA--TCAC-ATG-G--C--TT-CTCTTTCAA--------CAT-TTTCAGTTTCCTT---CTCCGACCTATGCGAAAA-AAAATGCCATTCCTTAAGCATGAAACAATTTGATTTTGC-C-CCTTAATTGTGTTTAAATCACT--TGCAGCAGGGCTTAT--TACATTTAATG-------AGTGAC----------------------------ACAACAGT-GCCAT-TTAAAAAATCTGCCACTCTCTGCCCCC-TTCAGTACTTTTAG-TGCTTTTATTT
gi|67478 : --A--TA-CATTTTCAAAGGGAAACAATCT--AAGTTACCTTCTCCTCTGATTTATTCGAAAATATGG-GCCA-ACTTT--GCACAGAA-----------TGTAC-CA-----TGCATTAG---CAA-----TACTCG---------------CAACG-GTACAAACTGGAC-TTCTTGTT----T------ATTACAAAAAAAACCTAACATGTT--CACATCTTGCACGTTCCGCCCCA-AT-AGTAC-TTCTGATGCTTTGATTT
gi|67479 : TTCTAC-TTCAACGTATGCAAACTGACC-TGTTTGTC----T------A----AAACAATAGC-GACAT-TT--TACATCTTATATGCTCTGCCCCC-ATCAGCAC-TGCAG-TGCTTTGATTT
gi|67480 : TATGTAAAC-GACCCTGCATGTCCACAT------A----AAACAAGGTC-AACAT-TT--TACATCTTCCCTGCT----CCCT-TTCAGTACTTAAAG-TGCTTTGATT