lowQualScore : 5555555 44444 3 11111111111111111111 1 222 22 1 2 222222222222222222222222 1
lowQualScore : 6666666666 3 3333 999 1 1 3 1 6666666 55 5 22 00000 55555 333 6 8 0 1 2 2 33 77777777777777777777 2 2 1 2 7 111 7 88 3 8888 0 9 2 0 99 4 5 77777777 99999999999 111111111111111111111111 7
lowQualScore : .......... . .... ... . . . . ....... .. . .. ..... ..... ... . . . . . . .. .................... . . . . . ... . .. . .... . . . . .. . . ........ ........... ........................ .
lowQualScore : 9999999999 6 5555 222 7 7 6 7 9999999 22 3 66 77777 00000 555 0 5 4 1 2 2 11 11111111111111111111 1 1 1 1 0 555 6 88 3 4444 4 5 0 8 55 0 0 66666666 55555555555 111111111111111111111111 0
consensus : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTCGGGAAATTG-GAAAACTTAGTTA-G-A--TTTCTGATAT--GTTAAGTAAGA-----AG---GCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTGATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAAC-GGTTTTAATAATGCATTTGC--AAAAAA-TGCT-AA-CA-N--CATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-----------AA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Reference ( gi|77731 ) : AAAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATT--TGAAAATGT-AGG-TTTGGAAAATTG-GAAAACTTATCTA-TTA--TTTCTAATAT--GTTAA-----A-----AG---GCAATTCATTGGGGTTTAGAAAAGAATGTGGTATGTTTAATATTT-TTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAAC-GGTTTTAAAAATGCATTTG---AAAAAA-TGC--AA-CA-C--CATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-----------AA-----------AAGTTATCATCATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGATGTT
gi|77730 : AAAATCAAAGGTCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TATTAATT--CGAAAATGT-AGG-TTCGGAAAAATG-GAAAACTTAGTTA-G-A--TTTCTGATAC--GTTAA-----A-----AG---GCATTTCATTGGGATTTAGAAAATAATGTGGTGTGTTTAATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTTAAC-GGTTTTAATAATGCATTTG---AAAAAA-TGC--AAACA-C--CATGGTACACACCGTCTTCC---TAATAAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACACCTCC-----------ACAT------------A-----------AAGTCATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77732 : AAAAGCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----GGTTAATT--CAAAAATGT-AGA-TTCGCAAAATTG-GAAAACGTAGTTA-G-A--TTTCTGATAT--GTTAA-----A-----AT---GCAATTCATTGGGATTTAGAAAAGACTGTGGTGTGTCTAACATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAAC-A-TTTTAATAATGCATTTG---AAAAAAATGC--AAACA-C--CATGGTACACATCGTCTTCTTTTTGA-AAATTGACTTAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCCCC-----------ACAT-----------AA-----------AAGTTATCAACATGAACAACTTTTATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77733 : AAAATCAAAGGCCTCAAATGCCTCAAAGTCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATT--CGAAAACGT-AGG-TTAGGGAAATTG-GAAAACTAAGTTA-G-A--TTTCTGATAT--GTTAAGTAAGA-----AG---GCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTGATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAAC-GGTTTTAATATTACATTTGC--AAAAAA-TGTTGTA-CA-A--CATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGTAATTTACAGGGAATTTTGTAAACTGGTAATGTGGTGGTCCAGCA--------ATCCTTTCAACATCTCC-----------ACAT-----------AA-----------AAGTTATCAACATGAGCAGCCTATATGAAAGCTTG--AAACAAACCTTCATATT-TGA
gi|77734 : AAAATCAAAGGTCT-----A----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTTGGAAA-TTG-GAAAACTTA---G-TTAGGTGTCTGAAAT--GTTAAGTAAGA-----AG---GCAATTCATTGGGATTTAGAAAAGAATGTGGTGTATTTGATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATCCTTTTCCAACAGTAGCTATCATAT-GGTTTTTATAATGCATTTGCAAAAAAAA-TGC--AA-AA-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTTACTTAATATTCGATGAACCTGGTTAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTTCAGGA--------TTCCTTTCCACATCTCC-----------ACATAAAATCAACATAA-----------AAGTTATCAAAATGAAAAACCTATATGAAAGCTTGATTAACAAACCC---TATTCTGACGTTcttt
gi|77737 : AACATCGAAGGCCT-----T----AAAGGCCTGAGGGAAGGCTCGCTGCTTA----TGTTAATT--CGAAAATGT-AGG-TTCGGGAAATTG-GAAAACTAAGTTA-G-A--TTTCTGATAT--GTTAAGTAAGA-----AG---GCAATTCATTGGGATTTAGAAAAGAATGTGGGGTGTTTAATATTA-TTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATACAA
gi|77736 : AAAACCAAAGGTAT-----G----AAAGGCCTGAGGGAAGGCTCGCTGTTTG----TGTTAATT--CG
gi|77738 : AAAATCAAAGGCCT-----G----AACGGCCTGAGGGAAGGCTCACT
gi|77739 : AATATCAAAGGCTT-----G----AAACGTCTGAGGAAAGGCTTGATACTTGAACAAATCAATT----AATAT-T-AGGATTTGGGATATTGAAAAAACTTA
gi|77741 : AAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTCAGAAAATTG-GAAAACTTAGTTA-G-A--TTTCTGATAT--GTTAA-----A-----AG---GCAATTTATTGGGAATTAGAAAATAATGTGGTGTGTTTAATATTTCTTT-T-GTGTAT--TTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAAT-GGTTTTAATATTGCATTTG---AAAAAAATGC--AAACA-C--CATGGTCAACACCGTCTTCTGTGTGA-ATATTTACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTT--------TCC-----------ACAT-----------AA-----------AAGATATTAACATGAACAACCTATATGAAAGCTTCACAAACAA
gi|77740 : AAATCAAAGGCCT-----C----AAAGGCCTGAAGGAAGGCTCACTGCTTG----TGTTAATT--CAAAAATGT-AGG-TTCGGATA-TTT-GAAAACTTAGTTA-G-A--TTTCTGATAT--GTTAAGTAAGA-----AG---GCAACTCATTGCGATTTAGAAAAGAATGTGGTGTGTTTGATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATATAACACAG--TCCAATATCAATACTTTTCCAACAATACCTATCAAAC-GGTTTTAATATTGCATTTGC--AAAAAA-TGCTGAA-CA-A--CATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGATAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------TCAT-----------AA-----------AAGTTACCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77742 : AAATCAAAGGCCT-----A----AAAGGCCTGATTGAAGGTTCGCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTCGGGAAATTC-GAAAACTTATTTA-G-A--TTTTTGAACT--GTTAAGTAAGA-----AG---GCAATTCATTGGGATTTAGAAAAGAATGTGGT----TTGATATTTCTTT-T-GTGTAT--CTGTATA--------------------AAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCAAACAGTAGCTATCAAAC-GGTTTTAATAGTGCTTTTGC--AAAAAA-TGCTAAA-CA-A--TATGGTACACACTGTCTTCCCTGTGA-AAACTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTTTAAACTGACAATGTGGTGGTCCAGGA--------TTTCTTTCCACATCTCCACATAAAAACAACAT-----------AA-----------AAGTTATTAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77743 : AAATCAAAGGACT-----T----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATT--CAAAAATAT-AGG-TTCGGAAAATTG-AAAAACTTAGTTA-G-A--TTTCTGATAT--GTTAA-----A-----AG---GCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTAATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATGCAAT------TCCA-TATCAATACTTTTCCTACAGTAGCTATTAAAC-GGTTTTAATAATGCATTTG---AAAAAA-TGC--AAACA-C--CATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCTTGGTGAAAATATCCATTT-CAGGACAT
gi|77744 : AAATCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----TGTTTATT--CGAAAATGT-AGG-TCCGGGAAAATG-GAAAACTTAGTTA--GA--TTTGTGATTT--GTTAAGT---A-----AGATAGCAATTCGTTTGGATTTgaagttaatttccacatgaagttatcaacatgaacaacatatatgaaagcttcacaaacaaaccttcatattctgatgtt
gi|77745 : AATCAAAGGCCT-----G----AAGGCCCTGCGGGAAGGCTCGCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTCGGAAAATTG-GAAAAATTAGTTA-T-A--TTTCTGATAT--GTTAA-----A-----AG---GCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTAATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATGTAATTCATAGTCCA-TATCAATACTTTTCCAAAAGTAGCTATTAAAC-AGTTTTAATAATGCATTTG---AAAAAA-TGC--AAACA-C--CATGGTACACACTGTCTTCCGTATGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGAGGTGGTCCTGGATTTCTAATTTTCTTTCCACATCTCC-----------ACAT------------A-----------AAGTTCTCAACATGAACAACCTATATGAAAGCTTCAAAAACAAACCTTCATATTCTGATGTTtcatacaatacagagtccatatcaatacttttccaacagtagtataaaacggttttaattatgcatttgcaaaaaatgcttaacaacatggtacacactgtcttccctgtgaaaattgactgaatatttgatgaccatggtgaaaatatccatttacaggaaattttgtaaactggtaacgtgatggtccaggattcctttccatatctccacataaaagttatcaacatgaacaacctttatgaaagcttgacaacaaaccttcatattctgacgtt
gi|77746 : AACCAAAGGCAT-----C----AAAGGCCTGAGTGAAGGCTGACTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTCGGGAAATTA-GAAAACTTA---AGTTAGATTTCTGATAT--GTTAA-----ATAAGAAG---ACAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTGATATTTCTTT-T-GTGAAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAAC-GGTTTTAATATTGTATTTGC--AAAAAA-TGCTGAA-CA-A--CATGGTATACACTGTCTTCCCTGTGA-AAATTGACTGAATATTAGATGACTCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACAT-----------AA-----------AAGTTATTAACATGAACAACCTACATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77747 : AATCAAAGGCCT-----C----AAAGGCCTGAGGAAAG-CTCCCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTTGGGAAATTG-GAAAACTTAGTTA-G-A--TTTCCGTTAT--GTTAAGTAAGA-----AG---GCAATTTATTTGGATTTAGAAAAGAATGTGGTGTGTTTGATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAATCCA-TATCAATACTTTTCCAACAGTACTTATCCTAC-GGTTTTAATTTTGCATTTC---AAAAAA-TGCTGAA-CA-A--CATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTTGTGAAAATTGCCATTTACAGGCAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCACC-----------ACAT-----------AA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGAAGTT
gi|77750 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAG-CTCGCTGCTTG----TGTTAATT--TGAAAATGT-AGG-TTTGGAAAATTG-GAAAACTTAGTTA-G-A--TTTCTGATAT--GTTAA-----A-----AG---GCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTAATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAAC-GGTTTTAATAATGCATTTG---AAACAA--GA--AA-TA-T--CA
gi|77751 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTCG----TGTTAATT--CAAAAATGTAAGG-TTCGGAAAATTG-AAAAACTTAGTTA--GA--TTTCTGATAT--GTAAA-----A-----AG---GCAATTCATTGGG
gi|77748 : AATCAAAGGCCT-----C----AAAGGCCTGTGGGAGTGCTCGCTGCTTG----TGTTCATT--CAAAAATGT-AAG-TTCGGAAAATTG-GAAAACTTAGTTA--GA--TTTCTGATAT--GTTAAGTAAGA-----AG---GCAATTTA
gi|77749 : AATCAAAGGCCT-----A----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATT--TGAAAATGT-AGG-TTCAGGAAATTG-GAAAACTTAGTTA--GA--TTCTTAAAAT--TTTAA-----
gi|77752 : AACCAAAGGCCT-----C----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATT--gt
gi|77753 : AATCAAAGGCCT-----G----AATGGCCTGAGGGAAGGCTCACTc
gi|77754 : ATCAAAGGCTT-----G----AAGGGCCGGAAGGAAGGCTCGCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTCAGAAAATTG-AAAAATTTAGTTA-G-A--TTTCTGATAT--GTTAA-----A-----AG---GCATTTTATTGGGATTTAAAAAAGAATGTGGTGTGTTTAATATTTCTTT-T-GTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATGCATTTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAACCAGTTTTAATAATGCATTTG---AAAAAAATGC--AAACA-C--CATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTAAAAATATCCATTT-CAGGACATTTTGTAAACTCGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT------------A-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTAACAAACAAACCTTCATATTCTGATGTT
gi|77755 : GCCT-----G----AA---------GGAAAACTC-CTACTTG----AACGAATTCATAAATATTT-GGA-TTTGGGAAATT--GAAAACTT
gi|77756 : caaatacctgaact----AAAGGCCTGAGGGAAGGCTTGCTGCTTG----TGTTAATT--CGAAAATGT-AGG-TTCGGTAAATTG-GAAAACTTAGTTA-G-A--TTTCTGATAT--GTTAAGTAAGA-----AG---GCAATTCAATGGGATTTAGAAAAGAATGTGGTGTGTTTGATATTCCTTT-T-GTGAAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACATTGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAAT-GGTTTTAATAATGCATTTGC--AAAAAA-TGCTGAA-CA-A--CATGGTACACACTGTCTTCCTTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACAT-----------AA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTTta
gi|77735 : GCCTCAGAGAAGGCTCGCTGCATG----TGTTCATT--CCAAAATGT-AGG-TTCGGGAAATTG-GAAAACTAAGTTA-G-A--TTTCTGATTTCAGTAAA-----A-----AG---GCAATTCATTGAGATTAAAAAAAGAATGTGGTTCGTTTGATATTT-CTT-TCGTGTAT--CTGTATA--------------------AA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTTCAACAGTACCTATTAAAC-GGTTTTAATAATGCATTTG---AAAAAAATGCTAAA-CA-A--CATGGTACACACC----T---TGTGA-AAATTGAATGAATATTCGATAACCCCGGTGAAAATTGCCATTTACAGGGAGTTTTGTTAACTGGTAACGTGGTCGTCCAGGA--------TTCCTTTCCACATCTCC-----------ATTT-----------AA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77757 : aaaataaatcaaacAATT----AAAATCA-AAG-TTGAAAAAATTG-AAAAACTTAGTTA-G-A--TTTCTGATAT--GTTAA-----A-----AG---GCAATTCATTGGGATTTAGAAAAGAATGTGTTGTGTTTAATATTT-TTTAT-GTGTATGACTGTATA--------------------AA-TAATCTCCTACATACAAAACAGAGTCCA-TATCAATATTTTTCCAACCGTAGCTATCAAAC-GGTTTTAATAATGCATTTG---AAAAAA-TGC--AAACA-C--CATGGTACACACTGTCTTCCACGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAA-CTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-----------AA-----------AAGTTATCAACATGAACAACCTATATGAAAACTTCACAAACAAACCTTCATATTCTGATATT
gi|77758 : AATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT------C-TTT-T-GTGTAT--CTGTATATACTGTCTGTATATCTGTATAA-TAATCTCCTGCATACAATACTGAGTCCA-TATCAATACTTTTCCAACAGTACCTACCAAAC-GGCTTTAATAATGCATTTGC--AAAAAA-TGCTAAA-CA-A--CATGGTATACACTGTCTTCCCTATGA-AAATTGACTGCATATTCGATGAAC-TGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTTACGTGGTGGTCAAGGA--------TTTCTT--------TCC-----------ACAT-----------AA-----------AAGATATCAACATGAACAACCTACATGAAAGTTTGACAAACAAATTTTCATATTCTG
gi|77759 : TA--------------------AG-TAA---CCTGCATACAATATAGAGTCCA-TATCAATACTTTTCTAACAGAAGCTATCAAAT-GGTTTTGATAATGCATTTGC--AAAAAA-TGCTTAA-CA-A--TGTGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCCATGACCCTGGTGAAAATTGCCATTTACAGGGAATTCTGTAAACTGGTAACTTGGTGGTCCAGGA--------TTCCTTTCCACATATCC-----------ACATAAAATCAACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAATC-TCATATTCTGATGTT
gi|77744 : CATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAG-TATAAAAC-GGTTTTAATTATGCATTTGC--AAAAAA-TGCTTAA-CA-A--CATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCATGGTGAAAATATCCATTTACAGGAAATTTTGTAAACTGGTAACGTGATGGTCCAGGA--------TTCCTTTCCATATCTCC-----------ACAT-----------AA-----------AAGTTATCAACATGAACAACCTTTATGAAAGCTTGAC-AACAAACCTTCATATTCTGACGTT
gi|77760 : aaatcaaaggcctgaaaggcctgaaggaaggctcgctgcttgtgtttattcgaaaatgtaggtccgggaaaatggaaaacttagttagatttgtgatttgttaagtaagatagcaattcgtttggattttGCATTTGC--AAAAAA-TGCCAAA-CA-A--CATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGGAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACATCTCC-----------ACAT-----------AAAATCAACATACAAATTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77761 : taattcAAAAA-TGC--AA-AAAC--CATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAAGA--------TTCCTTTCCACATCTCC-----------ACAT------------A-----------AAGTAATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77743 : ATTTCC-----------ACAT-----------GA-----------A-GTTATCAACATGAACAACATATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
Alignments
lowQualScore : 11111 111111 222 1 22222222222
lowQualScore : 6666666666 3333 44 1 2 1 1 1 66666 5555555 6666666 2 22 2 2 2 22 222222 222 1 3 1 3 1 0 22 2 0 77777777 77777777777 1 99999999999
lowQualScore : .......... .... .. . . . . . ..... ....... ....... . .. . . . .. ...... ... . . . . . . .. . . ........ ........... . ...........
lowQualScore : 5555555555 4444 00 7 5 7 7 8 88888 8888888 8888888 1 99 0 0 0 66 666666 333 9 8 0 0 9 3 99 0 6 22222222 11111111111 0 00000000000
consensus : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGC-N-A-A-CAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Reference ( family-625 ) : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGC-T-A-A-CANCATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77730 : AAAATCAAAGGTCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TATTAATTCGAAAATGT--AGG-TTCGGAAAAATG-GAAAACTTA-GTTAG-ATTTCTGATACGTTAA-----AAGGCATTTCATTGGGATTTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTTAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACCGTCTTCC---TAATAAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACACCTCC-----------ACAT-A-----------AAGTCATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77731 : AAAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-TCTATTATTTCTAATATGTTAA-----AAGGCAATTCATTGGGGTTTAGAAAAGAATGTGGTATGTTT-----A-ATATTT--------T-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAAAAAT--GCATTTG------AAAAAATGC---A-A-CACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCATCATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGATGTT
gi|77732 : AAAAGCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----GGTTAATTCAAAAATGT--AGA-TTCGCAAAATTG-GAAAACGTA-GTTAG-ATTTCTGATATGTTAA-----AATGCAATTCATTGGGATTTAGAAAAGACTGTGGTGTGTCT-----A-ACATTT-------CT-TTTGTGTAT--CTGTAT-AAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-C-ATTTTAATAAT--GCATTTG---A--AAAAAATGC-A-A-A-CACCATGGTACACATCGTCTTCTTTTTGA-AAATTGACTTAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCCCC-----------ACATAA-----------AAGTTATCAACATGAACAACTTTTATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77733 : AAAATCAAAGGCCTCAAATGCCTCAAAGTCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAACGT--AGG-TTAGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--ACATTTG---C--AAAAAATGT-T-GTA-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGTAATTTACAGGGAATTTTGTAAACTGGTAATGTGGTGGTCCAGCA--------ATCCTTTCAACATCTCC-----------ACATAA-----------AAGTTATCAACATGAGCAGCCTATATGAAAGCTTG--AAACAAACCTTCATATT-TGACTTT
gi|77734 : AAAATCAAAGGTCT-----A----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGG-AAATTG-GAAAACTTA-GTTAG-GTGTCTGAAATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTATTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATCCTTTTCCAACAGTAGCTATCATA-TGGTTTTTATAAT--GCATTTG---CAAAAAAAATGCAA-A-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTTACTTAATATTCGATGAACCTGGTTAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTTCAGGA--------TTCCTTTCCACATCTCCACATAAAATCAACATAA-----------AAGTTATCAAAATGAAAAACCTATATGAAAGCTTGATTAACAAACCC---TATTCTGACGTT
gi|77735 : AAAAT-AAA----T-----C----AAACGCCTCAGAGAAGGCTCGCTGCATG----TGTTCATTCCAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGAT---TTCAGTAAAAAGGCAATTCATTGAGATTAAAAAAAGAATGTGGTTCGTTT-----G-ATATTT-------CT-TTCGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTTCAACAGTACCTATTAAA-CGGTTTTAATAAT--GCATTTG---A--AAAAAATGC-T-A-AACAACATGGTACACACC-------TTGTGA-AAATTGAATGAATATTCGATAACCCCGGTGAAAATTGCCATTTACAGGGAGTTTTGTTAACTGGTAACGTGGTCGTCCAGGA--------TTCCTTTCCACATCTCC-----------ATTTAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77736 : AAAACCAAAGGTAT-----G----AAAGGCCTGAGGGAAGGCTCGCTGTTTG----TGTTAATTCG
gi|77737 : AACATCGAAGGCCT-----T----AAAGGCCTGAGGGAAGGCTCGCTGCTTA----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGGGTGTTT-----A-ATA-TT-------AT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAA
gi|77738 : AAAATCAAAGGCCT-----G----AACGGCCTGAGGGAAGGCTCACT
gi|77739 : AATATCAAAGGCTT-----G----AAACGTCTGAGGAAAGGCTTGATACTTGAACAAATCAATT--AATAT-T--AGGATTTGGGATATTGAAAAAACTTA-
gi|77740 : AAATCAAAGGCCT-----C----AAAGGCCTGAAGGAAGGCTCACTGCTTG----TGTTAATTCAAAAATGT--AGG-TTCGG-ATATTT-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAACTCATTGCGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATATAACACAG--TCCAATATCAATACTTTTCCAACAATACCTATCAAA-CGGTTTTAATATT--GCATTTG---C--AAAAAATGC-TGA-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGATAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------TCATAA-----------AAGTTACCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77741 : AAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTTATTGGGAATTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--TTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-TGGTTTTAATATT--GCATTTG---A--AAAAAATGC-A-A-A-CACCATGGTCAACACCGTCTTCTGTGTGA-ATATTTACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTT--------TCC-----------ACATAA-----------AAGATATTAACATGAACAACCTATATGAAAGCTTCACAAACAA
gi|77742 : AAATCAAAGGCCT-----A----AAAGGCCTGATTGAAGGTTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTC-GAAAACTTA-TTTAG-ATTTTTGAACTGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTG----GTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCAAACAGTAGCTATCAAA-CGGTTTTAATAGT--GCTTTTG---C--AAAAAATGC-TAA-A-CAATATGGTACACACTGTCTTCCCTGTGA-AAACTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTTTAAACTGACAATGTGGTGGTCCAGGA--------TTTCTTTCCACATCTCCACATAAAAACAACATAA-----------AAGTTATTAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77743 : AAATCAAAGGACT-----T----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCAAAAATAT--AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAAT------TCCA-TATCAATACTTTTCCTACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCTTGGTGAAAATATCCATTT-CAGG
gi|77743 : ATTTCC-----------ACATGA-----------A-GTTATCAACATGAACAACATATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTTacatgaagttaatttccacatgaagttatcaacatgaacaacatatatgaaagcttcacaaacaaaccttcatattctgatgtt
gi|77744 : aaatcaaaggacttaagggcctgagggaaggctcgctgcttgtgttaattcaaaaatataggttcggaaaattgaaaaacttagttagatttctgatatgttaaaaggcatttcattgggatttagaaaagaatgtggtgtgtttaatatttcttttgtgtatctgtataaataatctcctgcatgcaattccatatcaatacttttcctacagtagctattaaacggttttaataatgcatttgaaaaaatgcaaacaccatggtacacaccgtcttccgtgtgaaaattgactgaatatttgatgaccttggtgaaaatatccatttcaggacatgaagttaAAATCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----TGTTTATTCGAAAATGT--AGG-TCCGGGAAAATG-GAAAACTTA-GTTAG-ATTTGTGATTTGTTAAGTAAGATAGCAATTCGTTTGGATTT
gi|77744 : CATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAG-TATAAAA-CGGTTTTAATTAT--GCATTTG---C--AAAAAATGCTT-A-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCATGGTGAAAATATCCATTTACAGGAAATTTTGTAAACTGGTAACGTGATGGTCCAGGA--------TTCCTTTCCATATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTTTATGAAAGCTTGAC-AACAAACCTTCATATTCTGACGTTtcatacaatacagagtccatatcaatacttttccaacagtagtataaaacggttttaattatgcatttgcaaaaaatgcttaacaacatggtacacactgtcttccctgtgaaaattgactgaatatttgatgaccatggtgaaaatatccatttacaggaaattttgtaaactggtaacgtgatggtccaggattcctttccatatctccacataaaagttatcaacatgaacaacctttatgaaagcttgacaacaaaccttcatattctgacgtt
gi|77745 : aaatcaaaggcctgaaaggcctgaaggaaggctcgctgcttgtgtttattcgaaaatgtaggtccgggaaaatggaaaacttagttagatttgtgatttgttaagtaagatagcaattcgtttggattttAATCAAAGGCCT-----G----AAGGCCCTGCGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGAAAATTG-GAAAAATTA-GTTAT-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGTAATTCATAGTCCA-TATCAATACTTTTCCAAAAGTAGCTATTAAA-CAGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACTGTCTTCCGTATGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGAGGTGGTCCTGGATTTCTAATTTTCTTTCCACATCTCC-----------ACAT-A-----------AAGTTCTCAACATGAACAACCTATATGAAAGCTTCAAAAACAAACCTTCATATTCTGATGTT
gi|77746 : AACCAAAGGCAT-----C----AAAGGCCTGAGTGAAGGCTGACTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTA-GAAAACTTAAGTTAG-ATTTCTGATATGTTAAATAAGAAGACAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGAAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--GTATTTG---C--AAAAAATGC-TGA-A-CAACATGGTATACACTGTCTTCCCTGTGA-AAATTGACTGAATATTAGATGACTCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATTAACATGAACAACCTACATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77747 : AATCAAAGGCCT-----C----AAAGGCCTGAGGAAAG-CTCCCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGGGAAATTG-GAAAACTTA-GTTAG-ATTTCCGTTATGTTAAGTAAGAAGGCAATTTATTTGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAATCCA-TATCAATACTTTTCCAACAGTACTTATCCTA-CGGTTTTAATTTT--GCATTT----C--AAAAAATGC-TGA-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTTGTGAAAATTGCCATTTACAGGCAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCACC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGAAGTT
gi|77748 : AATCAAAGGCCT-----C----AAAGGCCTGTGGGAGTGCTCGCTGCTTG----TGTTCATTCAAAAATGT--AAG-TTCGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTTA
gi|77749 : AATCAAAGGCCT-----A----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTTGAAAATGT--AGG-TTCAGGAAATTG-GAAAACTTA-GTTAG-ATTCTTAAAATTTTAAGT
gi|77750 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAG-CTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTGAAAC--AAGAAAT
gi|77751 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTCG----TGTTAATTCAAAAATGTA-AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATAT-----GTAAAAAGGCAATTCATTGGGatca
gi|77752 : AACCAAAGGCCT-----C----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTC
gi|77753 : AATCAAAGGCCT-----G----AATGGCCTGAGGGAAGGCTCACT
gi|77754 : ATCAAAGGCTT-----G----AAGGGCCGGAAGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-AAAAATTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTTATTGGGATTTAAAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCATTTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAACCAGTTTTAATAAT--GCATTTG---A--AAAAAATGC-A-A-A-CACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTAAAAATATCCATTT-CAGGACATTTTGTAAACTCGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTAACAAACAAACCTTCATATTCTGATGTT
gi|77755 : CAAATACCT-----G----AACTGCCTGAAGGAAAACTC-CTACTTG----AACGAATTCATAAATATTTGGA-TTTGGGAAATT--GAAAACTT
gi|77756 : ----AAAGGCCTGAGGGAAGGCTTGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGTAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCAATGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTC-------CT-TTTGTGAAT--CTGTAT-AAATAATCTCCTGCATACAATACATTGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-TGGTTTTAATAAT--GCATTTG---C--AAAAAATGC-TGA-A-CAACATGGTACACACTGTCTTCCTTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTTta
gi|77757 : AATT--AAAATCA--AAG-TTGAAAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTCATTGGGATTTAGAAAAGAATGTGTTGTGTTT-----A-ATATTT-------TT-TATGTGTATGACTGTAT-AAATAATCTCCTACATACAAAACAGAGTCCA-TATCAATATTTTTCCAACCGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACTGTCTTCCACGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAA-CTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAACTTCACAAACAAACCTTCATATTCTGATATT
gi|77758 : AATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTCTTTTGTGTATCTGTATATACTGTCTGTATAT--CTGTAT-AA-TAATCTCCTGCATACAATACTGAGTCCA-TATCAATACTTTTCCAACAGTACCTACCAAA-CGGCTTTAATAAT--GCATTTG---C--AAAAAATGC-TAA-A-CAACATGGTATACACTGTCTTCCCTATGA-AAATTGACTGCATATTCGATGA-ACTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTTACGTGGTGGTCAAGGA--------TTTCTT--------TCC-----------ACATAA-----------AAGATATCAACATGAACAACCTACATGAAAGTTTGACAAACAAATTTTCATATTCTG
gi|77759 : T-AAGTAA---CCTGCATACAATATAGAGTCCA-TATCAATACTTTTCTAACAGAAGCTATCAAA-TGGTTTTGATAAT--GCATTTG---C--AAAAAATGC-TTA-A-CAATGTGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCCATGACCCTGGTGAAAATTGCCATTTACAGGGAATTCTGTAAACTGGTAACTTGGTGGTCCAGGA--------TTCCTTTCCACATATCCACATAAAATCAACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAATC-TCATATTCTGATGTT
gi|77760 : TAATTCGCATTTG---C--AAAAAATGC-C-A-AACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGGAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACATCTCC-----------ACATAAAATCAACATACAAATTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77761 : AAAAATGC-A-A-A-AACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAAGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTAATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
Alignments
lowQualScore : 11111 111111 222 1 22222222222
lowQualScore : 6666666666 3333 44 1 2 1 1 1 66666 5555555 6666666 2 22 2 2 2 22 222222 000 1 3 1 3 1 0 22 2 0 77777777 77777777777 1 99999999999
lowQualScore : .......... .... .. . . . . . ..... ....... ....... . .. . . . .. ...... ... . . . . . . .. . . ........ ........... . ...........
lowQualScore : 5555555555 4444 00 7 5 7 7 8 88888 8888888 8888888 1 99 0 0 0 66 666666 000 9 8 3 0 9 3 99 0 6 22222222 11111111111 0 00000000000
consensus : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGC-A-A-A-CAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Reference ( family-625 ) : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGC-N-A-A-CAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77730 : AAAATCAAAGGTCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TATTAATTCGAAAATGT--AGG-TTCGGAAAAATG-GAAAACTTA-GTTAG-ATTTCTGATACGTTAA-----AAGGCATTTCATTGGGATTTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTTAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACCGTCTTCC---TAATAAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACACCTCC-----------ACAT-A-----------AAGTCATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77731 : AAAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-TCTATTATTTCTAATATGTTAA-----AAGGCAATTCATTGGGGTTTAGAAAAGAATGTGGTATGTTT-----A-ATATTT--------T-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAAAAAT--GCATTTG------AAAAAATGC---A-A-CACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCATCATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGATGTT
gi|77732 : AAAAGCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----GGTTAATTCAAAAATGT--AGA-TTCGCAAAATTG-GAAAACGTA-GTTAG-ATTTCTGATATGTTAA-----AATGCAATTCATTGGGATTTAGAAAAGACTGTGGTGTGTCT-----A-ACATTT-------CT-TTTGTGTAT--CTGTAT-AAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-C-ATTTTAATAAT--GCATTTG---A--AAAAAATGC-A-A-A-CACCATGGTACACATCGTCTTCTTTTTGA-AAATTGACTTAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCCCC-----------ACATAA-----------AAGTTATCAACATGAACAACTTTTATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77733 : AAAATCAAAGGCCTCAAATGCCTCAAAGTCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAACGT--AGG-TTAGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--ACATTTG---C--AAAAAATGT-T-GTA-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGTAATTTACAGGGAATTTTGTAAACTGGTAATGTGGTGGTCCAGCA--------ATCCTTTCAACATCTCC-----------ACATAA-----------AAGTTATCAACATGAGCAGCCTATATGAAAGCTTG--AAACAAACCTTCATATT-TGACTTT
gi|77734 : AAAATCAAAGGTCT-----A----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGG-AAATTG-GAAAACTTA-GTTAG-GTGTCTGAAATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTATTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATCCTTTTCCAACAGTAGCTATCATA-TGGTTTTTATAAT--GCATTTG---CAAAAAAAATGCAA-A-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTTACTTAATATTCGATGAACCTGGTTAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTTCAGGA--------TTCCTTTCCACATCTCCACATAAAATCAACATAA-----------AAGTTATCAAAATGAAAAACCTATATGAAAGCTTGATTAACAAACCC---TATTCTGACGTT
gi|77735 : AAAAT-AAA----T-----C----AAACGCCTCAGAGAAGGCTCGCTGCATG----TGTTCATTCCAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGAT---TTCAGTAAAAAGGCAATTCATTGAGATTAAAAAAAGAATGTGGTTCGTTT-----G-ATATTT-------CT-TTCGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTTCAACAGTACCTATTAAA-CGGTTTTAATAAT--GCATTTG---A--AAAAAATGC-T-A-AACAACATGGTACACACC-------TTGTGA-AAATTGAATGAATATTCGATAACCCCGGTGAAAATTGCCATTTACAGGGAGTTTTGTTAACTGGTAACGTGGTCGTCCAGGA--------TTCCTTTCCACATCTCC-----------ATTTAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77736 : AAAACCAAAGGTAT-----G----AAAGGCCTGAGGGAAGGCTCGCTGTTTG----TGTTAATTCG
gi|77737 : AACATCGAAGGCCT-----T----AAAGGCCTGAGGGAAGGCTCGCTGCTTA----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGGGTGTTT-----A-ATA-TT-------AT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAA
gi|77738 : AAAATCAAAGGCCT-----G----AACGGCCTGAGGGAAGGCTCACT
gi|77739 : AATATCAAAGGCTT-----G----AAACGTCTGAGGAAAGGCTTGATACTTGAACAAATCAATT--AATAT-T--AGGATTTGGGATATTGAAAAAACTTA-
gi|77740 : AAATCAAAGGCCT-----C----AAAGGCCTGAAGGAAGGCTCACTGCTTG----TGTTAATTCAAAAATGT--AGG-TTCGG-ATATTT-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAACTCATTGCGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATATAACACAG--TCCAATATCAATACTTTTCCAACAATACCTATCAAA-CGGTTTTAATATT--GCATTTG---C--AAAAAATGC-TGA-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGATAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------TCATAA-----------AAGTTACCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77741 : AAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTTATTGGGAATTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--TTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-TGGTTTTAATATT--GCATTTG---A--AAAAAATGC-A-A-A-CACCATGGTCAACACCGTCTTCTGTGTGA-ATATTTACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTT--------TCC-----------ACATAA-----------AAGATATTAACATGAACAACCTATATGAAAGCTTCACAAACAA
gi|77742 : AAATCAAAGGCCT-----A----AAAGGCCTGATTGAAGGTTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTC-GAAAACTTA-TTTAG-ATTTTTGAACTGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTG----GTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCAAACAGTAGCTATCAAA-CGGTTTTAATAGT--GCTTTTG---C--AAAAAATGCTA-A-A-CAATATGGTACACACTGTCTTCCCTGTGA-AAACTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTTTAAACTGACAATGTGGTGGTCCAGGA--------TTTCTTTCCACATCTCCACATAAAAACAACATAA-----------AAGTTATTAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77743 : AAATCAAAGGACT-----T----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCAAAAATAT--AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAAT------TCCA-TATCAATACTTTTCCTACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCTTGGTGAAAATATCCATTT-CAGG
gi|77743 : ATTTCC-----------ACATGA-----------A-GTTATCAACATGAACAACATATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTTacatgaagttaatttccacatgaagttatcaacatgaacaacatatatgaaagcttcacaaacaaaccttcatattctgatgtt
gi|77744 : aaatcaaaggacttaagggcctgagggaaggctcgctgcttgtgttaattcaaaaatataggttcggaaaattgaaaaacttagttagatttctgatatgttaaaaggcatttcattgggatttagaaaagaatgtggtgtgtttaatatttcttttgtgtatctgtataaataatctcctgcatgcaattccatatcaatacttttcctacagtagctattaaacggttttaataatgcatttgaaaaaatgcaaacaccatggtacacaccgtcttccgtgtgaaaattgactgaatatttgatgaccttggtgaaaatatccatttcaggacatgaagttaAAATCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----TGTTTATTCGAAAATGT--AGG-TCCGGGAAAATG-GAAAACTTA-GTTAG-ATTTGTGATTTGTTAAGTAAGATAGCAATTCGTTTGGATTT
gi|77744 : CATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAG-TATAAAA-CGGTTTTAATTAT--GCATTTG---C--AAAAAATGCTT-A-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCATGGTGAAAATATCCATTTACAGGAAATTTTGTAAACTGGTAACGTGATGGTCCAGGA--------TTCCTTTCCATATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTTTATGAAAGCTTGAC-AACAAACCTTCATATTCTGACGTTtcatacaatacagagtccatatcaatacttttccaacagtagtataaaacggttttaattatgcatttgcaaaaaatgcttaacaacatggtacacactgtcttccctgtgaaaattgactgaatatttgatgaccatggtgaaaatatccatttacaggaaattttgtaaactggtaacgtgatggtccaggattcctttccatatctccacataaaagttatcaacatgaacaacctttatgaaagcttgacaacaaaccttcatattctgacgtt
gi|77745 : aaatcaaaggcctgaaaggcctgaaggaaggctcgctgcttgtgtttattcgaaaatgtaggtccgggaaaatggaaaacttagttagatttgtgatttgttaagtaagatagcaattcgtttggattttAATCAAAGGCCT-----G----AAGGCCCTGCGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGAAAATTG-GAAAAATTA-GTTAT-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGTAATTCATAGTCCA-TATCAATACTTTTCCAAAAGTAGCTATTAAA-CAGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACTGTCTTCCGTATGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGAGGTGGTCCTGGATTTCTAATTTTCTTTCCACATCTCC-----------ACAT-A-----------AAGTTCTCAACATGAACAACCTATATGAAAGCTTCAAAAACAAACCTTCATATTCTGATGTT
gi|77746 : AACCAAAGGCAT-----C----AAAGGCCTGAGTGAAGGCTGACTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTA-GAAAACTTAAGTTAG-ATTTCTGATATGTTAAATAAGAAGACAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGAAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--GTATTTG---C--AAAAAATGC-TGA-A-CAACATGGTATACACTGTCTTCCCTGTGA-AAATTGACTGAATATTAGATGACTCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATTAACATGAACAACCTACATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77747 : AATCAAAGGCCT-----C----AAAGGCCTGAGGAAAG-CTCCCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGGGAAATTG-GAAAACTTA-GTTAG-ATTTCCGTTATGTTAAGTAAGAAGGCAATTTATTTGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAATCCA-TATCAATACTTTTCCAACAGTACTTATCCTA-CGGTTTTAATTTT--GCATTT----C--AAAAAATGCTG-A-A-CAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTTGTGAAAATTGCCATTTACAGGCAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCACC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGAAGTT
gi|77748 : AATCAAAGGCCT-----C----AAAGGCCTGTGGGAGTGCTCGCTGCTTG----TGTTCATTCAAAAATGT--AAG-TTCGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTTA
gi|77749 : AATCAAAGGCCT-----A----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTTGAAAATGT--AGG-TTCAGGAAATTG-GAAAACTTA-GTTAG-ATTCTTAAAATTTTAAGT
gi|77750 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAG-CTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTGAAAC--AAGAAAT
gi|77751 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTCG----TGTTAATTCAAAAATGTA-AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATAT-----GTAAAAAGGCAATTCATTGGGatca
gi|77752 : AACCAAAGGCCT-----C----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTC
gi|77753 : AATCAAAGGCCT-----G----AATGGCCTGAGGGAAGGCTCACT
gi|77754 : ATCAAAGGCTT-----G----AAGGGCCGGAAGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-AAAAATTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTTATTGGGATTTAAAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCATTTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAACCAGTTTTAATAAT--GCATTTG---A--AAAAAATGC-A-A-A-CACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTAAAAATATCCATTT-CAGGACATTTTGTAAACTCGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTAACAAACAAACCTTCATATTCTGATGTT
gi|77755 : CAAATACCT-----G----AACTGCCTGAAGGAAAACTC-CTACTTG----AACGAATTCATAAATATTTGGA-TTTGGGAAATT--GAAAACTT
gi|77756 : ----AAAGGCCTGAGGGAAGGCTTGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGTAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCAATGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTC-------CT-TTTGTGAAT--CTGTAT-AAATAATCTCCTGCATACAATACATTGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-TGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTG-A-A-CAACATGGTACACACTGTCTTCCTTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTTta
gi|77757 : AATT--AAAATCA--AAG-TTGAAAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTCATTGGGATTTAGAAAAGAATGTGTTGTGTTT-----A-ATATTT-------TT-TATGTGTATGACTGTAT-AAATAATCTCCTACATACAAAACAGAGTCCA-TATCAATATTTTTCCAACCGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-A-A-A-CACCATGGTACACACTGTCTTCCACGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAA-CTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAACTTCACAAACAAACCTTCATATTCTGATATT
gi|77758 : AATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTCTTTTGTGTATCTGTATATACTGTCTGTATAT--CTGTAT-AA-TAATCTCCTGCATACAATACTGAGTCCA-TATCAATACTTTTCCAACAGTACCTACCAAA-CGGCTTTAATAAT--GCATTTG---C--AAAAAATGCTA-A-A-CAACATGGTATACACTGTCTTCCCTATGA-AAATTGACTGCATATTCGATGA-ACTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTTACGTGGTGGTCAAGGA--------TTTCTT--------TCC-----------ACATAA-----------AAGATATCAACATGAACAACCTACATGAAAGTTTGACAAACAAATTTTCATATTCTG
gi|77759 : T-AAGTAA---CCTGCATACAATATAGAGTCCA-TATCAATACTTTTCTAACAGAAGCTATCAAA-TGGTTTTGATAAT--GCATTTG---C--AAAAAATGC-TTA-A-CAATGTGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCCATGACCCTGGTGAAAATTGCCATTTACAGGGAATTCTGTAAACTGGTAACTTGGTGGTCCAGGA--------TTCCTTTCCACATATCCACATAAAATCAACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAATC-TCATATTCTGATGTT
gi|77760 : TAATTCGCATTTG---C--AAAAAATGC-C-A-AACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGGAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACATCTCC-----------ACATAAAATCAACATACAAATTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77761 : AAAAATGC-A-A-A-AACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAAGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTAATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
Alignments
lowQualScore : 11111 111111 1 1 22222222222
lowQualScore : 6666666666 3333 44 1 2 1 1 1 66666 5555555 6666666 2 22 2 2 2 22 222222 1 9 1 1 3 1 0 22 2 0 77777777 77777777777 1 99999999999
lowQualScore : .......... .... .. . . . . . ..... ....... ....... . .. . . . .. ...... . . . . . . . .. . . ........ ........... . ...........
lowQualScore : 5555555555 4444 00 7 5 7 7 8 88888 8888888 8888888 1 99 0 0 0 66 666666 9 0 9 3 0 9 3 99 0 6 22222222 11111111111 0 00000000000
consensus : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATG-CTA-AACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Reference ( family-625 ) : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATG-C-A-AACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77730 : AAAATCAAAGGTCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TATTAATTCGAAAATGT--AGG-TTCGGAAAAATG-GAAAACTTA-GTTAG-ATTTCTGATACGTTAA-----AAGGCATTTCATTGGGATTTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTTAA-CGGTTTTAATAAT--GCATTTG------AAAAAATG-C-A-AACACCATGGTACACACCGTCTTCC---TAATAAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACACCTCC-----------ACAT-A-----------AAGTCATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77731 : AAAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-TCTATTATTTCTAATATGTTAA-----AAGGCAATTCATTGGGGTTTAGAAAAGAATGTGGTATGTTT-----A-ATATTT--------T-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAAAAAT--GCATTTG------AAAAAATG-C-A-A-CACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCATCATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGATGTT
gi|77732 : AAAAGCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----GGTTAATTCAAAAATGT--AGA-TTCGCAAAATTG-GAAAACGTA-GTTAG-ATTTCTGATATGTTAA-----AATGCAATTCATTGGGATTTAGAAAAGACTGTGGTGTGTCT-----A-ACATTT-------CT-TTTGTGTAT--CTGTAT-AAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-C-ATTTTAATAAT--GCATTTG---A--AAAAAATG-C-A-AACACCATGGTACACATCGTCTTCTTTTTGA-AAATTGACTTAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCCCC-----------ACATAA-----------AAGTTATCAACATGAACAACTTTTATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77733 : AAAATCAAAGGCCTCAAATGCCTCAAAGTCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAACGT--AGG-TTAGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--ACATTTG---C--AAAAAATGTT-G-TACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGTAATTTACAGGGAATTTTGTAAACTGGTAATGTGGTGGTCCAGCA--------ATCCTTTCAACATCTCC-----------ACATAA-----------AAGTTATCAACATGAGCAGCCTATATGAAAGCTTG--AAACAAACCTTCATATT-TGACTTT
gi|77734 : AAAATCAAAGGTCT-----A----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGG-AAATTG-GAAAACTTA-GTTAG-GTGTCTGAAATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTATTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATCCTTTTCCAACAGTAGCTATCATA-TGGTTTTTATAAT--GCATTTG---CAAAAAAAATG-CAA-AACAACATGGTACACACTGTCTTCCCTGTGA-AAATTTACTTAATATTCGATGAACCTGGTTAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTTCAGGA--------TTCCTTTCCACATCTCCACATAAAATCAACATAA-----------AAGTTATCAAAATGAAAAACCTATATGAAAGCTTGATTAACAAACCC---TATTCTGACGTT
gi|77735 : AAAAT-AAA----T-----C----AAACGCCTCAGAGAAGGCTCGCTGCATG----TGTTCATTCCAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGAT---TTCAGTAAAAAGGCAATTCATTGAGATTAAAAAAAGAATGTGGTTCGTTT-----G-ATATTT-------CT-TTCGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTTCAACAGTACCTATTAAA-CGGTTTTAATAAT--GCATTTG---A--AAAAAATG-CTA-AACAACATGGTACACACC-------TTGTGA-AAATTGAATGAATATTCGATAACCCCGGTGAAAATTGCCATTTACAGGGAGTTTTGTTAACTGGTAACGTGGTCGTCCAGGA--------TTCCTTTCCACATCTCC-----------ATTTAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77736 : AAAACCAAAGGTAT-----G----AAAGGCCTGAGGGAAGGCTCGCTGTTTG----TGTTAATTCG
gi|77737 : AACATCGAAGGCCT-----T----AAAGGCCTGAGGGAAGGCTCGCTGCTTA----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGGGTGTTT-----A-ATA-TT-------AT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAA
gi|77738 : AAAATCAAAGGCCT-----G----AACGGCCTGAGGGAAGGCTCACT
gi|77739 : AATATCAAAGGCTT-----G----AAACGTCTGAGGAAAGGCTTGATACTTGAACAAATCAATT--AATAT-T--AGGATTTGGGATATTGAAAAAACTTA-
gi|77740 : AAATCAAAGGCCT-----C----AAAGGCCTGAAGGAAGGCTCACTGCTTG----TGTTAATTCAAAAATGT--AGG-TTCGG-ATATTT-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAACTCATTGCGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATATAACACAG--TCCAATATCAATACTTTTCCAACAATACCTATCAAA-CGGTTTTAATATT--GCATTTG---C--AAAAAATG-CTG-AACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGATAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------TCATAA-----------AAGTTACCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77741 : AAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTTATTGGGAATTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--TTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-TGGTTTTAATATT--GCATTTG---A--AAAAAATG-C-A-AACACCATGGTCAACACCGTCTTCTGTGTGA-ATATTTACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTT--------TCC-----------ACATAA-----------AAGATATTAACATGAACAACCTATATGAAAGCTTCACAAACAA
gi|77742 : AAATCAAAGGCCT-----A----AAAGGCCTGATTGAAGGTTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTC-GAAAACTTA-TTTAG-ATTTTTGAACTGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTG----GTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCAAACAGTAGCTATCAAA-CGGTTTTAATAGT--GCTTTTG---C--AAAAAATG-CTA-AACAATATGGTACACACTGTCTTCCCTGTGA-AAACTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTTTAAACTGACAATGTGGTGGTCCAGGA--------TTTCTTTCCACATCTCCACATAAAAACAACATAA-----------AAGTTATTAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77743 : AAATCAAAGGACT-----T----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCAAAAATAT--AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAAT------TCCA-TATCAATACTTTTCCTACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATG-C-A-AACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCTTGGTGAAAATATCCATTT-CAGG
gi|77743 : ATTTCC-----------ACATGA-----------A-GTTATCAACATGAACAACATATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTTacatgaagttaatttccacatgaagttatcaacatgaacaacatatatgaaagcttcacaaacaaaccttcatattctgatgtt
gi|77744 : aaatcaaaggacttaagggcctgagggaaggctcgctgcttgtgttaattcaaaaatataggttcggaaaattgaaaaacttagttagatttctgatatgttaaaaggcatttcattgggatttagaaaagaatgtggtgtgtttaatatttcttttgtgtatctgtataaataatctcctgcatgcaattccatatcaatacttttcctacagtagctattaaacggttttaataatgcatttgaaaaaatgcaaacaccatggtacacaccgtcttccgtgtgaaaattgactgaatatttgatgaccttggtgaaaatatccatttcaggacatgaagttaAAATCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----TGTTTATTCGAAAATGT--AGG-TCCGGGAAAATG-GAAAACTTA-GTTAG-ATTTGTGATTTGTTAAGTAAGATAGCAATTCGTTTGGATTT
gi|77744 : CATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAG-TATAAAA-CGGTTTTAATTAT--GCATTTG---C--AAAAAATG-CTT-AACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCATGGTGAAAATATCCATTTACAGGAAATTTTGTAAACTGGTAACGTGATGGTCCAGGA--------TTCCTTTCCATATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTTTATGAAAGCTTGAC-AACAAACCTTCATATTCTGACGTTtcatacaatacagagtccatatcaatacttttccaacagtagtataaaacggttttaattatgcatttgcaaaaaatgcttaacaacatggtacacactgtcttccctgtgaaaattgactgaatatttgatgaccatggtgaaaatatccatttacaggaaattttgtaaactggtaacgtgatggtccaggattcctttccatatctccacataaaagttatcaacatgaacaacctttatgaaagcttgacaacaaaccttcatattctgacgtt
gi|77745 : aaatcaaaggcctgaaaggcctgaaggaaggctcgctgcttgtgtttattcgaaaatgtaggtccgggaaaatggaaaacttagttagatttgtgatttgttaagtaagatagcaattcgtttggattttAATCAAAGGCCT-----G----AAGGCCCTGCGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGAAAATTG-GAAAAATTA-GTTAT-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGTAATTCATAGTCCA-TATCAATACTTTTCCAAAAGTAGCTATTAAA-CAGTTTTAATAAT--GCATTTG------AAAAAATG-C-A-AACACCATGGTACACACTGTCTTCCGTATGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGAGGTGGTCCTGGATTTCTAATTTTCTTTCCACATCTCC-----------ACAT-A-----------AAGTTCTCAACATGAACAACCTATATGAAAGCTTCAAAAACAAACCTTCATATTCTGATGTT
gi|77746 : AACCAAAGGCAT-----C----AAAGGCCTGAGTGAAGGCTGACTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTA-GAAAACTTAAGTTAG-ATTTCTGATATGTTAAATAAGAAGACAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGAAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--GTATTTG---C--AAAAAATG-CTG-AACAACATGGTATACACTGTCTTCCCTGTGA-AAATTGACTGAATATTAGATGACTCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATTAACATGAACAACCTACATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77747 : AATCAAAGGCCT-----C----AAAGGCCTGAGGAAAG-CTCCCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGGGAAATTG-GAAAACTTA-GTTAG-ATTTCCGTTATGTTAAGTAAGAAGGCAATTTATTTGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATACAATACAGAATCCA-TATCAATACTTTTCCAACAGTACTTATCCTA-CGGTTTTAATTTT--GCATTT----C--AAAAAATG-CTG-AACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTTGTGAAAATTGCCATTTACAGGCAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCACC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGAAGTT
gi|77748 : AATCAAAGGCCT-----C----AAAGGCCTGTGGGAGTGCTCGCTGCTTG----TGTTCATTCAAAAATGT--AAG-TTCGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTTA
gi|77749 : AATCAAAGGCCT-----A----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTTGAAAATGT--AGG-TTCAGGAAATTG-GAAAACTTA-GTTAG-ATTCTTAAAATTTTAAGT
gi|77750 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAG-CTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTGAAAC--AAGAAAT
gi|77751 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTCG----TGTTAATTCAAAAATGTA-AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATAT-----GTAAAAAGGCAATTCATTGGGatca
gi|77752 : AACCAAAGGCCT-----C----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTC
gi|77753 : AATCAAAGGCCT-----G----AATGGCCTGAGGGAAGGCTCACT
gi|77754 : ATCAAAGGCTT-----G----AAGGGCCGGAAGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-AAAAATTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTTATTGGGATTTAAAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTAT-AAATAATCTCCTGCATGCATTTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAACCAGTTTTAATAAT--GCATTTG---A--AAAAAATG-C-A-AACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTAAAAATATCCATTT-CAGGACATTTTGTAAACTCGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTAACAAACAAACCTTCATATTCTGATGTT
gi|77755 : CAAATACCT-----G----AACTGCCTGAAGGAAAACTC-CTACTTG----AACGAATTCATAAATATTTGGA-TTTGGGAAATT--GAAAACTT
gi|77756 : ----AAAGGCCTGAGGGAAGGCTTGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGTAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCAATGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTC-------CT-TTTGTGAAT--CTGTAT-AAATAATCTCCTGCATACAATACATTGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-TGGTTTTAATAAT--GCATTTG---C--AAAAAATG-CTG-AACAACATGGTACACACTGTCTTCCTTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTTta
gi|77757 : AATT--AAAATCA--AAG-TTGAAAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTCATTGGGATTTAGAAAAGAATGTGTTGTGTTT-----A-ATATTT-------TT-TATGTGTATGACTGTAT-AAATAATCTCCTACATACAAAACAGAGTCCA-TATCAATATTTTTCCAACCGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATG-C-A-AACACCATGGTACACACTGTCTTCCACGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAA-CTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAACTTCACAAACAAACCTTCATATTCTGATATT
gi|77758 : AATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTCTTTTGTGTATCTGTATATACTGTCTGTATAT--CTGTAT-AA-TAATCTCCTGCATACAATACTGAGTCCA-TATCAATACTTTTCCAACAGTACCTACCAAA-CGGCTTTAATAAT--GCATTTG---C--AAAAAATG-CTA-AACAACATGGTATACACTGTCTTCCCTATGA-AAATTGACTGCATATTCGATGA-ACTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTTACGTGGTGGTCAAGGA--------TTTCTT--------TCC-----------ACATAA-----------AAGATATCAACATGAACAACCTACATGAAAGTTTGACAAACAAATTTTCATATTCTG
gi|77759 : T-AAGTAA---CCTGCATACAATATAGAGTCCA-TATCAATACTTTTCTAACAGAAGCTATCAAA-TGGTTTTGATAAT--GCATTTG---C--AAAAAATG-C-TTAACAATGTGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCCATGACCCTGGTGAAAATTGCCATTTACAGGGAATTCTGTAAACTGGTAACTTGGTGGTCCAGGA--------TTCCTTTCCACATATCCACATAAAATCAACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAATC-TCATATTCTGATGTT
gi|77760 : TAATTCGCATTTG---C--AAAAAATG-CCA-AACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGGAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACATCTCC-----------ACATAAAATCAACATACAAATTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77761 : AAAAATG-C-A-AAAACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAAGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTAATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
Alignments
lowQualScore : 11111 111111 1 1 22222222222
lowQualScore : 6666666666 3333 44 1 2 1 1 1 66666 5555555 6666666 2 22 2 2 2 22 222222 4 1 1 3 1 0 22 2 0 77777777 77777777777 1 99999999999
lowQualScore : .......... .... .. . . . . . ..... ....... ....... . .. . . . .. ...... . . . . . . .. . . ........ ........... . ...........
lowQualScore : 5555555555 4444 00 7 5 7 7 8 88888 8888888 8888888 1 99 0 0 0 66 666666 0 3 1 0 9 3 99 0 6 22222222 11111111111 0 00000000000
consensus : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Reference ( family-625 ) : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77730 : AAAATCAAAGGTCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TATTAATTCGAAAATGT--AGG-TTCGGAAAAATG-GAAAACTTA-GTTAG-ATTTCTGATACGTTAA-----AAGGCATTTCATTGGGATTTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTTAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACCGTCTTCC---TAATAAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACACCTCC-----------ACAT-A-----------AAGTCATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77731 : AAAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-TCTATTATTTCTAATATGTTAA-----AAGGCAATTCATTGGGGTTTAGAAAAGAATGTGGTATGTTT-----A-ATATTT--------T-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAAAAAT--GCATTTG------AAAAAATGC--AACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCATCATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGATGTT
gi|77732 : AAAAGCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----GGTTAATTCAAAAATGT--AGA-TTCGCAAAATTG-GAAAACGTA-GTTAG-ATTTCTGATATGTTAA-----AATGCAATTCATTGGGATTTAGAAAAGACTGTGGTGTGTCT-----A-ACATTT-------CT-TTTGTGTAT--CTGTATAAA-TTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-C-ATTTTAATAAT--GCATTTG---A--AAAAAATGC-AAACACCATGGTACACATCGTCTTCTTTTTGA-AAATTGACTTAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCCCC-----------ACATAA-----------AAGTTATCAACATGAACAACTTTTATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77733 : AAAATCAAAGGCCTCAAATGCCTCAAAGTCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAACGT--AGG-TTAGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--ACATTTG---C--AAAAAATGTTGTACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGTAATTTACAGGGAATTTTGTAAACTGGTAATGTGGTGGTCCAGCA--------ATCCTTTCAACATCTCC-----------ACATAA-----------AAGTTATCAACATGAGCAGCCTATATGAAAGCTTG--AAACAAACCTTCATATT-TGACTTT
gi|77734 : AAAATCAAAGGTCT-----A----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGG-AAATTG-GAAAACTTA-GTTAG-GTGTCTGAAATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTATTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATCCTTTTCCAACAGTAGCTATCATA-TGGTTTTTATAAT--GCATTTG---CAAAAAAAATGCAAAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTTACTTAATATTCGATGAACCTGGTTAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTTCAGGA--------TTCCTTTCCACATCTCCACATAAAATCAACATAA-----------AAGTTATCAAAATGAAAAACCTATATGAAAGCTTGATTAACAAACCC---TATTCTGACGTT
gi|77735 : AAAAT-AAA----T-----C----AAACGCCTCAGAGAAGGCTCGCTGCATG----TGTTCATTCCAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGAT---TTCAGTAAAAAGGCAATTCATTGAGATTAAAAAAAGAATGTGGTTCGTTT-----G-ATATTT-------CT-TTCGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTTCAACAGTACCTATTAAA-CGGTTTTAATAAT--GCATTTG---A--AAAAAATGCTAAACAACATGGTACACA-------CCTTGTGA-AAATTGAATGAATATTCGATAACCCCGGTGAAAATTGCCATTTACAGGGAGTTTTGTTAACTGGTAACGTGGTCGTCCAGGA--------TTCCTTTCCACATCTCC-----------ATTTAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77736 : AAAACCAAAGGTAT-----G----AAAGGCCTGAGGGAAGGCTCGCTGTTTG----TGTTAATTCG
gi|77737 : AACATCGAAGGCCT-----T----AAAGGCCTGAGGGAAGGCTCGCTGCTTA----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGGGTGTTT-----A-ATA-TT-------AT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAA
gi|77738 : AAAATCAAAGGCCT-----G----AACGGCCTGAGGGAAGGCTCACT
gi|77739 : AATATCAAAGGCTT-----G----AAACGTCTGAGGAAAGGCTTGATACTTGAACAAATCAATT--AATAT-T--AGGATTTGGGATATTGAAAAAACTTA-
gi|77740 : AAATCAAAGGCCT-----C----AAAGGCCTGAAGGAAGGCTCACTGCTTG----TGTTAATTCAAAAATGT--AGG-TTCGG-ATATTT-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAACTCATTGCGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATATAACACAG--TCCAATATCAATACTTTTCCAACAATACCTATCAAA-CGGTTTTAATATT--GCATTTG---C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGATAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------TCATAA-----------AAGTTACCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77741 : AAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTTATTGGGAATTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--TTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-TGGTTTTAATATT--GCATTTG---A--AAAAAATGC-AAACACCATGGTCAACACCGTCTTCTGTGTGA-ATATTTACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTT--------TCC-----------ACATAA-----------AAGATATTAACATGAACAACCTATATGAAAGCTTCACAAACAA
gi|77742 : AAATCAAAGGCCT-----A----AAAGGCCTGATTGAAGGTTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTC-GAAAACTTA-TTTAG-ATTTTTGAACTGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGT----TT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCAAACAGTAGCTATCAAA-CGGTTTTAATAGT--GCTTTTG---C--AAAAAATGCTAAACAATATGGTACACACTGTCTTCCCTGTGA-AAACTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTTTAAACTGACAATGTGGTGGTCCAGGA--------TTTCTTTCCACATCTCCACATAAAAACAACATAA-----------AAGTTATTAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77743 : AAATCAAAGGACT-----T----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCAAAAATAT--AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAAT------TCCA-TATCAATACTTTTCCTACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCTTGGTGAAAATATCCATTT-CAGG
gi|77743 : ATTTCC-----------ACATGA-----------A-GTTATCAACATGAACAACATATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTTacatgaagttaatttccacatgaagttatcaacatgaacaacatatatgaaagcttcacaaacaaaccttcatattctgatgtt
gi|77744 : aaatcaaaggacttaagggcctgagggaaggctcgctgcttgtgttaattcaaaaatataggttcggaaaattgaaaaacttagttagatttctgatatgttaaaaggcatttcattgggatttagaaaagaatgtggtgtgtttaatatttcttttgtgtatctgtataaataatctcctgcatgcaattccatatcaatacttttcctacagtagctattaaacggttttaataatgcatttgaaaaaatgcaaacaccatggtacacaccgtcttccgtgtgaaaattgactgaatatttgatgaccttggtgaaaatatccatttcaggacatgaagttaAAATCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----TGTTTATTCGAAAATGT--AGG-TCCGGGAAAATG-GAAAACTTA-GTTAG-ATTTGTGATTTGTTAAGTAAGATAGCAATTCGTTTGGATTT
gi|77744 : CATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAG-TATAAAA-CGGTTTTAATTAT--GCATTTG---C--AAAAAATGCTTAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCATGGTGAAAATATCCATTTACAGGAAATTTTGTAAACTGGTAACGTGATGGTCCAGGA--------TTCCTTTCCATATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTTTATGAAAGCTTGAC-AACAAACCTTCATATTCTGACGTTtcatacaatacagagtccatatcaatacttttccaacagtagtataaaacggttttaattatgcatttgcaaaaaatgcttaacaacatggtacacactgtcttccctgtgaaaattgactgaatatttgatgaccatggtgaaaatatccatttacaggaaattttgtaaactggtaacgtgatggtccaggattcctttccatatctccacataaaagttatcaacatgaacaacctttatgaaagcttgacaacaaaccttcatattctgacgtt
gi|77745 : aaatcaaaggcctgaaaggcctgaaggaaggctcgctgcttgtgtttattcgaaaatgtaggtccgggaaaatggaaaacttagttagatttgtgatttgttaagtaagatagcaattcgtttggattttAATCAAAGGCCT-----G----AAGGCCCTGCGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGAAAATTG-GAAAAATTA-GTTAT-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGTAATTCATAGTCCA-TATCAATACTTTTCCAAAAGTAGCTATTAAA-CAGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACTGTCTTCCGTATGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGAGGTGGTCCTGGATTTCTAATTTTCTTTCCACATCTCC-----------ACAT-A-----------AAGTTCTCAACATGAACAACCTATATGAAAGCTTCAAAAACAAACCTTCATATTCTGATGTT
gi|77746 : AACCAAAGGCAT-----C----AAAGGCCTGAGTGAAGGCTGACTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTA-GAAAACTTAAGTTAG-ATTTCTGATATGTTAAATAAGAAGACAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGAAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--GTATTTG---C--AAAAAATGCTGAACAACATGGTATACACTGTCTTCCCTGTGA-AAATTGACTGAATATTAGATGACTCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATTAACATGAACAACCTACATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77747 : AATCAAAGGCCT-----C----AAAGGCCTGAGGAAAG-CTCCCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGGGAAATTG-GAAAACTTA-GTTAG-ATTTCCGTTATGTTAAGTAAGAAGGCAATTTATTTGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAATCCA-TATCAATACTTTTCCAACAGTACTTATCCTA-CGGTTTTAATTTT--GCATTT----C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTTGTGAAAATTGCCATTTACAGGCAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCACC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGAAGTT
gi|77748 : AATCAAAGGCCT-----C----AAAGGCCTGTGGGAGTGCTCGCTGCTTG----TGTTCATTCAAAAATGT--AAG-TTCGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTTA
gi|77749 : AATCAAAGGCCT-----A----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTTGAAAATGT--AGG-TTCAGGAAATTG-GAAAACTTA-GTTAG-ATTCTTAAAATTTTAAGT
gi|77750 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAG-CTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTGAAAC--AAGAAAT
gi|77751 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTCG----TGTTAATTCAAAAATGTA-AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATAT-----GTAAAAAGGCAATTCATTGGGatca
gi|77752 : AACCAAAGGCCT-----C----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTC
gi|77753 : AATCAAAGGCCT-----G----AATGGCCTGAGGGAAGGCTCACT
gi|77754 : ATCAAAGGCTT-----G----AAGGGCCGGAAGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-AAAAATTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTTATTGGGATTTAAAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCATTTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAACCAGTTTTAATAAT--GCATTTG---A--AAAAAATGC-AAACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTAAAAATATCCATTT-CAGGACATTTTGTAAACTCGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTAACAAACAAACCTTCATATTCTGATGTT
gi|77755 : CAAATACCT-----G----AACTGCCTGAAGGAAAACTC-CTACTTG----AACGAATTCATAAATATTTGGA-TTTGGGAAATT--GAAAACTT
gi|77756 : ----AAAGGCCTGAGGGAAGGCTTGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGTAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCAATGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTC-------CT-TTTGTGAAT--CTGTATAAA-TAATCTCCTGCATACAATACATTGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-TGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCTTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTTta
gi|77757 : AATT--AAAATCA--AAG-TTGAAAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTCATTGGGATTTAGAAAAGAATGTGTTGTGTTT-----A-ATATTT-------TT-TATGTGTATGACTGTATAAA-TAATCTCCTACATACAAAACAGAGTCCA-TATCAATATTTTTCCAACCGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACTGTCTTCCACGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAA-CTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAACTTCACAAACAAACCTTCATATTCTGATATT
gi|77758 : AATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTCTTTTGTGTATCTGTATATACTGTCTGTATAT--CTGTATAA--TAATCTCCTGCATACAATACTGAGTCCA-TATCAATACTTTTCCAACAGTACCTACCAAA-CGGCTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTATACACTGTCTTCCCTATGA-AAATTGACTGCATATTCGATGA-ACTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTTACGTGGTGGTCAAGGA--------TTTCTT--------TCC-----------ACATAA-----------AAGATATCAACATGAACAACCTACATGAAAGTTTGACAAACAAATTTTCATATTCTG
gi|77759 : TAAG-TAA---CCTGCATACAATATAGAGTCCA-TATCAATACTTTTCTAACAGAAGCTATCAAA-TGGTTTTGATAAT--GCATTTG---C--AAAAAATGCTTAACAATGTGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCCATGACCCTGGTGAAAATTGCCATTTACAGGGAATTCTGTAAACTGGTAACTTGGTGGTCCAGGA--------TTCCTTTCCACATATCCACATAAAATCAACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAATC-TCATATTCTGATGTT
gi|77760 : TAATTCGCATTTG---C--AAAAAATGCCAAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGGAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACATCTCC-----------ACATAAAATCAACATACAAATTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77761 : AAAAATGC-AAAAACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAAGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTAATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
Alignments
lowQualScore : 11111 111111 1 1 22222222222
lowQualScore : 6666666666 3333 44 1 2 1 1 1 66666 5555555 6666666 2 22 2 2 2 22 222222 4 1 1 3 1 0 22 2 0 77777777 77777777777 1 99999999999
lowQualScore : .......... .... .. . . . . . ..... ....... ....... . .. . . . .. ...... . . . . . . .. . . ........ ........... . ...........
lowQualScore : 5555555555 4444 00 7 5 7 7 8 88888 8888888 8888888 1 99 0 0 0 66 666666 0 3 1 0 9 3 99 0 6 22222222 11111111111 0 00000000000
consensus : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Reference ( family-625 ) : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77730 : AAAATCAAAGGTCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TATTAATTCGAAAATGT--AGG-TTCGGAAAAATG-GAAAACTTA-GTTAG-ATTTCTGATACGTTAA-----AAGGCATTTCATTGGGATTTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTTAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACCGTCTTCC---TAATAAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACACCTCC-----------ACAT-A-----------AAGTCATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77731 : AAAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-TCTATTATTTCTAATATGTTAA-----AAGGCAATTCATTGGGGTTTAGAAAAGAATGTGGTATGTTT-----A-ATATTT--------T-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAAAAAT--GCATTTG------AAAAAATGC--AACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCATCATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGATGTT
gi|77732 : AAAAGCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----GGTTAATTCAAAAATGT--AGA-TTCGCAAAATTG-GAAAACGTA-GTTAG-ATTTCTGATATGTTAA-----AATGCAATTCATTGGGATTTAGAAAAGACTGTGGTGTGTCT-----A-ACATTT-------CT-TTTGTGTAT--CTGTATAAA-TTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-C-ATTTTAATAAT--GCATTTG---A--AAAAAATGC-AAACACCATGGTACACATCGTCTTCTTTTTGA-AAATTGACTTAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCCCC-----------ACATAA-----------AAGTTATCAACATGAACAACTTTTATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77733 : AAAATCAAAGGCCTCAAATGCCTCAAAGTCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAACGT--AGG-TTAGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--ACATTTG---C--AAAAAATGTTGTACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGTAATTTACAGGGAATTTTGTAAACTGGTAATGTGGTGGTCCAGCA--------ATCCTTTCAACATCTCC-----------ACATAA-----------AAGTTATCAACATGAGCAGCCTATATGAAAGCTTG--AAACAAACCTTCATATT-TGACTTT
gi|77734 : AAAATCAAAGGTCT-----A----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGG-AAATTG-GAAAACTTA-GTTAG-GTGTCTGAAATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTATTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATCCTTTTCCAACAGTAGCTATCATA-TGGTTTTTATAAT--GCATTTG---CAAAAAAAATGCAAAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTTACTTAATATTCGATGAACCTGGTTAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTTCAGGA--------TTCCTTTCCACATCTCCACATAAAATCAACATAA-----------AAGTTATCAAAATGAAAAACCTATATGAAAGCTTGATTAACAAACCC---TATTCTGACGTT
gi|77735 : AAAAT-AAA----T-----C----AAACGCCTCAGAGAAGGCTCGCTGCATG----TGTTCATTCCAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGAT---TTCAGTAAAAAGGCAATTCATTGAGATTAAAAAAAGAATGTGGTTCGTTT-----G-ATATTT-------CT-TTCGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTTCAACAGTACCTATTAAA-CGGTTTTAATAAT--GCATTTG---A--AAAAAATGCTAAACAACATGGTACACA-------CCTTGTGA-AAATTGAATGAATATTCGATAACCCCGGTGAAAATTGCCATTTACAGGGAGTTTTGTTAACTGGTAACGTGGTCGTCCAGGA--------TTCCTTTCCACATCTCC-----------ATTTAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77736 : AAAACCAAAGGTAT-----G----AAAGGCCTGAGGGAAGGCTCGCTGTTTG----TGTTAATTCG
gi|77737 : AACATCGAAGGCCT-----T----AAAGGCCTGAGGGAAGGCTCGCTGCTTA----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGGGTGTTT-----A-ATA-TT-------AT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAA
gi|77738 : AAAATCAAAGGCCT-----G----AACGGCCTGAGGGAAGGCTCACT
gi|77739 : AATATCAAAGGCTT-----G----AAACGTCTGAGGAAAGGCTTGATACTTGAACAAATCAATT--AATAT-T--AGGATTTGGGATATTGAAAAAACTTA-
gi|77740 : AAATCAAAGGCCT-----C----AAAGGCCTGAAGGAAGGCTCACTGCTTG----TGTTAATTCAAAAATGT--AGG-TTCGG-ATATTT-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAACTCATTGCGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATATAACACAG--TCCAATATCAATACTTTTCCAACAATACCTATCAAA-CGGTTTTAATATT--GCATTTG---C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGATAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------TCATAA-----------AAGTTACCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77741 : AAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTTATTGGGAATTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--TTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-TGGTTTTAATATT--GCATTTG---A--AAAAAATGC-AAACACCATGGTCAACACCGTCTTCTGTGTGA-ATATTTACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTT--------TCC-----------ACATAA-----------AAGATATTAACATGAACAACCTATATGAAAGCTTCACAAACAA
gi|77742 : AAATCAAAGGCCT-----A----AAAGGCCTGATTGAAGGTTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTC-GAAAACTTA-TTTAG-ATTTTTGAACTGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGT----TT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCAAACAGTAGCTATCAAA-CGGTTTTAATAGT--GCTTTTG---C--AAAAAATGCTAAACAATATGGTACACACTGTCTTCCCTGTGA-AAACTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTTTAAACTGACAATGTGGTGGTCCAGGA--------TTTCTTTCCACATCTCCACATAAAAACAACATAA-----------AAGTTATTAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77743 : AAATCAAAGGACT-----T----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCAAAAATAT--AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAAT------TCCA-TATCAATACTTTTCCTACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCTTGGTGAAAATATCCATTT-CAGG
gi|77743 : ATTTCC-----------ACATGA-----------A-GTTATCAACATGAACAACATATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTTacatgaagttaatttccacatgaagttatcaacatgaacaacatatatgaaagcttcacaaacaaaccttcatattctgatgtt
gi|77744 : aaatcaaaggacttaagggcctgagggaaggctcgctgcttgtgttaattcaaaaatataggttcggaaaattgaaaaacttagttagatttctgatatgttaaaaggcatttcattgggatttagaaaagaatgtggtgtgtttaatatttcttttgtgtatctgtataaataatctcctgcatgcaattccatatcaatacttttcctacagtagctattaaacggttttaataatgcatttgaaaaaatgcaaacaccatggtacacaccgtcttccgtgtgaaaattgactgaatatttgatgaccttggtgaaaatatccatttcaggacatgaagttaAAATCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----TGTTTATTCGAAAATGT--AGG-TCCGGGAAAATG-GAAAACTTA-GTTAG-ATTTGTGATTTGTTAAGTAAGATAGCAATTCGTTTGGATTT
gi|77744 : CATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAG-TATAAAA-CGGTTTTAATTAT--GCATTTG---C--AAAAAATGCTTAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCATGGTGAAAATATCCATTTACAGGAAATTTTGTAAACTGGTAACGTGATGGTCCAGGA--------TTCCTTTCCATATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTTTATGAAAGCTTGAC-AACAAACCTTCATATTCTGACGTTtcatacaatacagagtccatatcaatacttttccaacagtagtataaaacggttttaattatgcatttgcaaaaaatgcttaacaacatggtacacactgtcttccctgtgaaaattgactgaatatttgatgaccatggtgaaaatatccatttacaggaaattttgtaaactggtaacgtgatggtccaggattcctttccatatctccacataaaagttatcaacatgaacaacctttatgaaagcttgacaacaaaccttcatattctgacgtt
gi|77745 : aaatcaaaggcctgaaaggcctgaaggaaggctcgctgcttgtgtttattcgaaaatgtaggtccgggaaaatggaaaacttagttagatttgtgatttgttaagtaagatagcaattcgtttggattttAATCAAAGGCCT-----G----AAGGCCCTGCGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGAAAATTG-GAAAAATTA-GTTAT-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGTAATTCATAGTCCA-TATCAATACTTTTCCAAAAGTAGCTATTAAA-CAGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACTGTCTTCCGTATGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGAGGTGGTCCTGGATTTCTAATTTTCTTTCCACATCTCC-----------ACAT-A-----------AAGTTCTCAACATGAACAACCTATATGAAAGCTTCAAAAACAAACCTTCATATTCTGATGTT
gi|77746 : AACCAAAGGCAT-----C----AAAGGCCTGAGTGAAGGCTGACTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTA-GAAAACTTAAGTTAG-ATTTCTGATATGTTAAATAAGAAGACAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGAAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--GTATTTG---C--AAAAAATGCTGAACAACATGGTATACACTGTCTTCCCTGTGA-AAATTGACTGAATATTAGATGACTCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATTAACATGAACAACCTACATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77747 : AATCAAAGGCCT-----C----AAAGGCCTGAGGAAAG-CTCCCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGGGAAATTG-GAAAACTTA-GTTAG-ATTTCCGTTATGTTAAGTAAGAAGGCAATTTATTTGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAATCCA-TATCAATACTTTTCCAACAGTACTTATCCTA-CGGTTTTAATTTT--GCATTT----C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTTGTGAAAATTGCCATTTACAGGCAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCACC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGAAGTT
gi|77748 : AATCAAAGGCCT-----C----AAAGGCCTGTGGGAGTGCTCGCTGCTTG----TGTTCATTCAAAAATGT--AAG-TTCGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTTA
gi|77749 : AATCAAAGGCCT-----A----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTTGAAAATGT--AGG-TTCAGGAAATTG-GAAAACTTA-GTTAG-ATTCTTAAAATTTTAAGT
gi|77750 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAG-CTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTGAAAC--AAGAAAT
gi|77751 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTCG----TGTTAATTCAAAAATGTA-AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATAT-----GTAAAAAGGCAATTCATTGGGatca
gi|77752 : AACCAAAGGCCT-----C----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTC
gi|77753 : AATCAAAGGCCT-----G----AATGGCCTGAGGGAAGGCTCACT
gi|77754 : ATCAAAGGCTT-----G----AAGGGCCGGAAGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-AAAAATTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTTATTGGGATTTAAAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCATTTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAACCAGTTTTAATAAT--GCATTTG---A--AAAAAATGC-AAACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTAAAAATATCCATTT-CAGGACATTTTGTAAACTCGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTAACAAACAAACCTTCATATTCTGATGTT
gi|77755 : CAAATACCT-----G----AACTGCCTGAAGGAAAACTC-CTACTTG----AACGAATTCATAAATATTTGGA-TTTGGGAAATT--GAAAACTT
gi|77756 : ----AAAGGCCTGAGGGAAGGCTTGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGTAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCAATGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTC-------CT-TTTGTGAAT--CTGTATAAA-TAATCTCCTGCATACAATACATTGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-TGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCTTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTTta
gi|77757 : AATT--AAAATCA--AAG-TTGAAAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTCATTGGGATTTAGAAAAGAATGTGTTGTGTTT-----A-ATATTT-------TT-TATGTGTATGACTGTATAAA-TAATCTCCTACATACAAAACAGAGTCCA-TATCAATATTTTTCCAACCGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACTGTCTTCCACGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAA-CTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAACTTCACAAACAAACCTTCATATTCTGATATT
gi|77758 : AATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTCTTTTGTGTATCTGTATATACTGTCTGTATAT--CTGTATAA--TAATCTCCTGCATACAATACTGAGTCCA-TATCAATACTTTTCCAACAGTACCTACCAAA-CGGCTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTATACACTGTCTTCCCTATGA-AAATTGACTGCATATTCGATGA-ACTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTTACGTGGTGGTCAAGGA--------TTTCTT--------TCC-----------ACATAA-----------AAGATATCAACATGAACAACCTACATGAAAGTTTGACAAACAAATTTTCATATTCTG
gi|77759 : TAAG-TAA---CCTGCATACAATATAGAGTCCA-TATCAATACTTTTCTAACAGAAGCTATCAAA-TGGTTTTGATAAT--GCATTTG---C--AAAAAATGCTTAACAATGTGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCCATGACCCTGGTGAAAATTGCCATTTACAGGGAATTCTGTAAACTGGTAACTTGGTGGTCCAGGA--------TTCCTTTCCACATATCCACATAAAATCAACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAATC-TCATATTCTGATGTT
gi|77760 : TAATTCGCATTTG---C--AAAAAATGCCAAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGGAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACATCTCC-----------ACATAAAATCAACATACAAATTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77761 : AAAAATGC-AAAAACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAAGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTAATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
blockSeqs : CAAATGCCTC AACA TT A A A A T GTAAG CTTTTGT GTATATA G GA A A C TC AAAC T C C G . AT A TTTCTAAT ACATAAAATCA A AATCAACATAC
blockSeqs : G . A . A . . . GTAAG A . . . . . . . CAA A C C T . AT A . ACATAAAAACA A .
blockSeqs : G . . . G . . . GTAAA A . . . . . . . A T A T C . TG A . ACATAAAATCA A .
blockSeqs : A . . . G . . . GTAAG G . . . . . . . C T A T C . TG A . . A .
blockSeqs : C . . . G . . . GTAAG G . . . . . . . A T A T T . TG A . . A .
blockSeqs : G . . . G . . . GTAAG G . . . . . . . C T A C C . TG A . . A .
blockSeqs : T . . . A . . . GTAAG A . . . . . . . A T C T G . AT A . . A .
blockSeqs : G . . . G . . . ATAAG G . . . . . . . C T A C C . TG A . . A .
blockSeqs : G . . . A . . . GTAAG A . . . . . . . C T C T G . AT A . . G .
blockSeqs : C . . . G . . . GTAAG G . . . . . . . C T A T C . AT A . . A .
blockSeqs : G . . . A . . . GTAAA A . . . . . . . C T C T G . AT A . . A .
blockSeqs : A . . . G . . . GTAAG A . . . . . . . A C A T C . TG A . . A .
blockSeqs : T . . . G . . . . G . . . . . . . C . A C C . TG . . . A .
blockSeqs : G . . . A . . . . G . . . . . . . C . C T G . AT . . . A .
blockSeqs : G . . . G . . . . A . . . . . . . C . A T T . TG . . . A .
blockSeqs : C . . . A . . . . A . . . . . . . C . C T A . AT . . . A .
blockSeqs : C . . . A . . . . G . . . . . . . . . A T C . TG . . . A .
blockSeqs : C . . . A . . . . A . . . . . . . . . A T C . TG . . . . .
blockSeqs : A . . . G . . . . . . . . . . A C C . TG . . . . .
blockSeqs : G . . . T . . . . . . . C . G . AT . . . .
blockSeqs : G . . . A . . .
blockSeqs : C . . . . . .
blockSeqs : G . . . . .
blockSeqs : G .
blockSeqs : G
blockSeqCons : GTAAG C*****
originalCons : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
finalCons : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTGC-----AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Alignments
lowQualScore : 11111 111111 1 1 22222222222
lowQualScore : 6666666666 3333 44 1 2 1 1 1 66666 5555555 6666666 2 22 2 2 2 22 222222 4 1 1 3 1 0 22 2 0 77777777 77777777777 1 99999999999
lowQualScore : .......... .... .. . . . . . ..... ....... ....... . .. . . . .. ...... . . . . . . .. . . ........ ........... . ...........
lowQualScore : 5555555555 4444 00 7 5 7 7 8 88888 8888888 8888888 1 99 0 0 0 66 666666 0 3 1 0 9 3 99 0 6 22222222 11111111111 0 00000000000
consensus : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
Reference ( family-625 ) : AAAATCAAAGGCCT-----G----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTACACACCGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATNGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77730 : AAAATCAAAGGTCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TATTAATTCGAAAATGT--AGG-TTCGGAAAAATG-GAAAACTTA-GTTAG-ATTTCTGATACGTTAA-----AAGGCATTTCATTGGGATTTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTTAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACCGTCTTCC---TAATAAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACACCTCC-----------ACAT-A-----------AAGTCATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77731 : AAAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-TCTATTATTTCTAATATGTTAA-----AAGGCAATTCATTGGGGTTTAGAAAAGAATGTGGTATGTTT-----A-ATATTT--------T-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAAAAAT--GCATTTG------AAAAAATGC--AACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCATCATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGATGTT
gi|77732 : AAAAGCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----GGTTAATTCAAAAATGT--AGA-TTCGCAAAATTG-GAAAACGTA-GTTAG-ATTTCTGATATGTTAA-----AATGCAATTCATTGGGATTTAGAAAAGACTGTGGTGTGTCT-----A-ACATTT-------CT-TTTGTGTAT--CTGTATAAA-TTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATCAAA-C-ATTTTAATAAT--GCATTTG---A--AAAAAATGC-AAACACCATGGTACACATCGTCTTCTTTTTGA-AAATTGACTTAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCCCC-----------ACATAA-----------AAGTTATCAACATGAACAACTTTTATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT
gi|77733 : AAAATCAAAGGCCTCAAATGCCTCAAAGTCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAACGT--AGG-TTAGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--ACATTTG---C--AAAAAATGTTGTACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGTAATTTACAGGGAATTTTGTAAACTGGTAATGTGGTGGTCCAGCA--------ATCCTTTCAACATCTCC-----------ACATAA-----------AAGTTATCAACATGAGCAGCCTATATGAAAGCTTG--AAACAAACCTTCATATT-TGACTTT
gi|77734 : AAAATCAAAGGTCT-----A----AAAGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGG-AAATTG-GAAAACTTA-GTTAG-GTGTCTGAAATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGTGTATTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATCCTTTTCCAACAGTAGCTATCATA-TGGTTTTTATAAT--GCATTTG---CAAAAAAAATGCAAAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTTACTTAATATTCGATGAACCTGGTTAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTTCAGGA--------TTCCTTTCCACATCTCCACATAAAATCAACATAA-----------AAGTTATCAAAATGAAAAACCTATATGAAAGCTTGATTAACAAACCC---TATTCTGACGTT
gi|77735 : AAAAT-AAA----T-----C----AAACGCCTCAGAGAAGGCTCGCTGCATG----TGTTCATTCCAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGAT---TTCAGTAAAAAGGCAATTCATTGAGATTAAAAAAAGAATGTGGTTCGTTT-----G-ATATTT-------CT-TTCGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTTCAACAGTACCTATTAAA-CGGTTTTAATAAT--GCATTTG---A--AAAAAATGCTAAACAACATGGTACACA-------CCTTGTGA-AAATTGAATGAATATTCGATAACCCCGGTGAAAATTGCCATTTACAGGGAGTTTTGTTAACTGGTAACGTGGTCGTCCAGGA--------TTCCTTTCCACATCTCC-----------ATTTAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77736 : AAAACCAAAGGTAT-----G----AAAGGCCTGAGGGAAGGCTCGCTGTTTG----TGTTAATTCG
gi|77737 : AACATCGAAGGCCT-----T----AAAGGCCTGAGGGAAGGCTCGCTGCTTA----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTG-GAAAACTAA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGGGTGTTT-----A-ATA-TT-------AT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAA
gi|77738 : AAAATCAAAGGCCT-----G----AACGGCCTGAGGGAAGGCTCACT
gi|77739 : AATATCAAAGGCTT-----G----AAACGTCTGAGGAAAGGCTTGATACTTGAACAAATCAATT--AATAT-T--AGGATTTGGGATATTGAAAAAACTTA-
gi|77740 : AAATCAAAGGCCT-----C----AAAGGCCTGAAGGAAGGCTCACTGCTTG----TGTTAATTCAAAAATGT--AGG-TTCGG-ATATTT-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAACTCATTGCGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATATAACACAG--TCCAATATCAATACTTTTCCAACAATACCTATCAAA-CGGTTTTAATATT--GCATTTG---C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGATAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------TCATAA-----------AAGTTACCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77741 : AAATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTTATTGGGAATTAGAAAATAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--TTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-TGGTTTTAATATT--GCATTTG---A--AAAAAATGC-AAACACCATGGTCAACACCGTCTTCTGTGTGA-ATATTTACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------TTCCTT--------TCC-----------ACATAA-----------AAGATATTAACATGAACAACCTATATGAAAGCTTCACAAACAA
gi|77742 : AAATCAAAGGCCT-----A----AAAGGCCTGATTGAAGGTTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTC-GAAAACTTA-TTTAG-ATTTTTGAACTGTTAAGTAAGAAGGCAATTCATTGGGATTTAGAAAAGAATGTGGT----TT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAAATTATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCAAACAGTAGCTATCAAA-CGGTTTTAATAGT--GCTTTTG---C--AAAAAATGCTAAACAATATGGTACACACTGTCTTCCCTGTGA-AAACTGACTGAATATTCGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTTTAAACTGACAATGTGGTGGTCCAGGA--------TTTCTTTCCACATCTCCACATAAAAACAACATAA-----------AAGTTATTAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77743 : AAATCAAAGGACT-----T----AAGGGCCTGAGGGAAGGCTCGCTGCTTG----TGTTAATTCAAAAATAT--AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAAT------TCCA-TATCAATACTTTTCCTACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCTTGGTGAAAATATCCATTT-CAGG
gi|77743 : ATTTCC-----------ACATGA-----------A-GTTATCAACATGAACAACATATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTTacatgaagttaatttccacatgaagttatcaacatgaacaacatatatgaaagcttcacaaacaaaccttcatattctgatgtt
gi|77744 : aaatcaaaggacttaagggcctgagggaaggctcgctgcttgtgttaattcaaaaatataggttcggaaaattgaaaaacttagttagatttctgatatgttaaaaggcatttcattgggatttagaaaagaatgtggtgtgtttaatatttcttttgtgtatctgtataaataatctcctgcatgcaattccatatcaatacttttcctacagtagctattaaacggttttaataatgcatttgaaaaaatgcaaacaccatggtacacaccgtcttccgtgtgaaaattgactgaatatttgatgaccttggtgaaaatatccatttcaggacatgaagttaAAATCAAAGGCCT-----G----AAAGGCCTGAAGGAAGGCTCGCTGCTTG----TGTTTATTCGAAAATGT--AGG-TCCGGGAAAATG-GAAAACTTA-GTTAG-ATTTGTGATTTGTTAAGTAAGATAGCAATTCGTTTGGATTT
gi|77744 : CATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTAG-TATAAAA-CGGTTTTAATTAT--GCATTTG---C--AAAAAATGCTTAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCATGGTGAAAATATCCATTTACAGGAAATTTTGTAAACTGGTAACGTGATGGTCCAGGA--------TTCCTTTCCATATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTTTATGAAAGCTTGAC-AACAAACCTTCATATTCTGACGTTtcatacaatacagagtccatatcaatacttttccaacagtagtataaaacggttttaattatgcatttgcaaaaaatgcttaacaacatggtacacactgtcttccctgtgaaaattgactgaatatttgatgaccatggtgaaaatatccatttacaggaaattttgtaaactggtaacgtgatggtccaggattcctttccatatctccacataaaagttatcaacatgaacaacctttatgaaagcttgacaacaaaccttcatattctgacgtt
gi|77745 : aaatcaaaggcctgaaaggcctgaaggaaggctcgctgcttgtgtttattcgaaaatgtaggtccgggaaaatggaaaacttagttagatttgtgatttgttaagtaagatagcaattcgtttggattttAATCAAAGGCCT-----G----AAGGCCCTGCGGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGAAAATTG-GAAAAATTA-GTTAT-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGTAATTCATAGTCCA-TATCAATACTTTTCCAAAAGTAGCTATTAAA-CAGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACTGTCTTCCGTATGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGAGGTGGTCCTGGATTTCTAATTTTCTTTCCACATCTCC-----------ACAT-A-----------AAGTTCTCAACATGAACAACCTATATGAAAGCTTCAAAAACAAACCTTCATATTCTGATGTT
gi|77746 : AACCAAAGGCAT-----C----AAAGGCCTGAGTGAAGGCTGACTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGGAAATTA-GAAAACTTAAGTTAG-ATTTCTGATATGTTAAATAAGAAGACAATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGAAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-CGGTTTTAATATT--GTATTTG---C--AAAAAATGCTGAACAACATGGTATACACTGTCTTCCCTGTGA-AAATTGACTGAATATTAGATGACTCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATTAACATGAACAACCTACATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77747 : AATCAAAGGCCT-----C----AAAGGCCTGAGGAAAG-CTCCCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTTGGGAAATTG-GAAAACTTA-GTTAG-ATTTCCGTTATGTTAAGTAAGAAGGCAATTTATTTGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATACAATACAGAATCCA-TATCAATACTTTTCCAACAGTACTTATCCTA-CGGTTTTAATTTT--GCATTT----C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTTGATGACCCTTGTGAAAATTGCCATTTACAGGCAATTTTGTAAACTGGTAACATGGTGGTCCAGGA--------ATCCTTTCCACATCACC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGAAGTT
gi|77748 : AATCAAAGGCCT-----C----AAAGGCCTGTGGGAGTGCTCGCTGCTTG----TGTTCATTCAAAAATGT--AAG-TTCGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTTA
gi|77749 : AATCAAAGGCCT-----A----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTTGAAAATGT--AGG-TTCAGGAAATTG-GAAAACTTA-GTTAG-ATTCTTAAAATTTTAAGT
gi|77750 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAG-CTCGCTGCTTG----TGTTAATTTGAAAATGT--AGG-TTTGGAAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTCATTGGGATTTAGAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCAATTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAA-CGGTTTTAATAAT--GCATTTGAAAC--AAGAAAT
gi|77751 : AATCAAAGGCCT-----G----AAGGGCCTGAGGGAAGGCTCGCTGCTCG----TGTTAATTCAAAAATGTA-AGG-TTCGGAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATAT-----GTAAAAAGGCAATTCATTGGGatca
gi|77752 : AACCAAAGGCCT-----C----AAAGGCCTGAGGGAAGGCTCACTGCTTG----TGTTAATTC
gi|77753 : AATCAAAGGCCT-----G----AATGGCCTGAGGGAAGGCTCACT
gi|77754 : ATCAAAGGCTT-----G----AAGGGCCGGAAGGAAGGCTCGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCAGAAAATTG-AAAAATTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCATTTTATTGGGATTTAAAAAAGAATGTGGTGTGTTT-----A-ATATTT-------CT-TTTGTGTAT--CTGTATAAA-TAATCTCCTGCATGCATTTCAGAGTCCA-TATCAATACTTTTCCAACAGTAGCTATTAAACCAGTTTTAATAAT--GCATTTG---A--AAAAAATGC-AAACACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTAAAAATATCCATTT-CAGGACATTTTGTAAACTCGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTAACAAACAAACCTTCATATTCTGATGTT
gi|77755 : CAAATACCT-----G----AACTGCCTGAAGGAAAACTC-CTACTTG----AACGAATTCATAAATATTTGGA-TTTGGGAAATT--GAAAACTT
gi|77756 : ----AAAGGCCTGAGGGAAGGCTTGCTGCTTG----TGTTAATTCGAAAATGT--AGG-TTCGGTAAATTG-GAAAACTTA-GTTAG-ATTTCTGATATGTTAAGTAAGAAGGCAATTCAATGGGATTTAGAAAAGAATGTGGTGTGTTT-----G-ATATTC-------CT-TTTGTGAAT--CTGTATAAA-TAATCTCCTGCATACAATACATTGTCCA-TATCAATACTTTTCCAACAGTACCTATCAAA-TGGTTTTAATAAT--GCATTTG---C--AAAAAATGCTGAACAACATGGTACACACTGTCTTCCTTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCAGGA--------ATCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACAAGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTTta
gi|77757 : AATT--AAAATCA--AAG-TTGAAAAAATTG-AAAAACTTA-GTTAG-ATTTCTGATATGTTAA-----AAGGCAATTCATTGGGATTTAGAAAAGAATGTGTTGTGTTT-----A-ATATTT-------TT-TATGTGTATGACTGTATAAA-TAATCTCCTACATACAAAACAGAGTCCA-TATCAATATTTTTCCAACCGTAGCTATCAAA-CGGTTTTAATAAT--GCATTTG------AAAAAATGC-AAACACCATGGTACACACTGTCTTCCACGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAA-CTGGTAACGTGGTGGTCCAGGA--------TTCCTTTCCACATCTCC-----------ACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAACTTCACAAACAAACCTTCATATTCTGATATT
gi|77758 : AATTCATTGGGATTTAGAAAAGAATGTGGTGTGTTTCTTTTGTGTATCTGTATATACTGTCTGTATAT--CTGTATAA--TAATCTCCTGCATACAATACTGAGTCCA-TATCAATACTTTTCCAACAGTACCTACCAAA-CGGCTTTAATAAT--GCATTTG---C--AAAAAATGCTAAACAACATGGTATACACTGTCTTCCCTATGA-AAATTGACTGCATATTCGATGA-ACTGGTGAAAATTGCCATTTACAGGGAATTTTGTAAACTGGTTACGTGGTGGTCAAGGA--------TTTCTT--------TCC-----------ACATAA-----------AAGATATCAACATGAACAACCTACATGAAAGTTTGACAAACAAATTTTCATATTCTG
gi|77759 : TAAG-TAA---CCTGCATACAATATAGAGTCCA-TATCAATACTTTTCTAACAGAAGCTATCAAA-TGGTTTTGATAAT--GCATTTG---C--AAAAAATGCTTAACAATGTGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCCATGACCCTGGTGAAAATTGCCATTTACAGGGAATTCTGTAAACTGGTAACTTGGTGGTCCAGGA--------TTCCTTTCCACATATCCACATAAAATCAACATAA-----------AAGTTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAATC-TCATATTCTGATGTT
gi|77760 : TAATTCGCATTTG---C--AAAAAATGCCAAACAACATGGTACACACTGTCTTCCCTGTGA-AAATTGACTGAATATTCGATGACCCTGGTGGAAATTGCCATTTACAGGGAATTTTGTAAACTGGTAACGTGGTGGTCCGGGA--------TTCCTTTCCACATCTCC-----------ACATAAAATCAACATACAAATTATCAACATGAACAACCTATATGAAAGCTTGACAAACAAACCTTCATATTCTGACGTT
gi|77761 : AAAAATGC-AAAAACCATGGTACACACCGTCTTCCGTGTGA-AAATTGACTGAATATTTGATGACCCTGGTGAAAATATCCATTT-CAGGACATTTTGTAAACTGGTAACGTGGTGGTCCAAGA--------TTCCTTTCCACATCTCC-----------ACAT-A-----------AAGTAATCAACATGAACAACCTATATGAAAGCTTCACAAACAAACCTTCATATTCTGATGTT