lowQualScore : 777777777777777777777777 1111 1111 1 222222222222222 1 1 1
lowQualScore : 888888888888888888888888 6 5555 3333 3 3 555 66 555 666666 6 3 3 3 44 000000000000000 3 88 5 1 4 5 4 55555555 222 4 5 1 33333 33333 55555555 5 3 1 1 1 222 3333
lowQualScore : ........................ . .... .... . . ... .. ... ...... . . . . .. ............... . .. . . . . . ........ ... . . . ..... ..... ........ . . . . . ... ....
lowQualScore : 222222222222222222222222 2 2222 1111 1 2 444 33 444 777777 0 1 3 3 66 888888888888888 3 33 0 2 0 0 1 44444444 666 8 4 4 44444 44444 00000000 0 7 6 8 6 888 4444
consensus : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTA-GAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGTTT----ACA-GGGGACCTGTCTGT---AATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTA----TTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
Reference ( gi|124438 ) : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTGTTAA-AAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGTTT----ACA-GTGGACCTGTCTGT---AATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTAGGAT---TCA----TTACAATGATGACGTTCAGCGGCAGCATAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAA-CCGAAACACATATCGAAACCTGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACAGGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACGAAAGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGACGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124439 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTAAGGCTGTATTTA-GAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGTTGTTT----ACT-GGGGACCTGTCTGT---AATTTTGCAGCGCCACTGAACGTTATATGGGGAAGTTGGGAT---TTA----TTACGATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAGCCCGAAACACATCTCAAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATATAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124440 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTGAGGCTGTATTTA-GAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGGTGTTT----ACT-GGGGACCTGTCTGT---AATTTTGCAGCGCCACTGAACGTTATAAGGGGAGGTTGGGAT---TTA----TTACGATGATGACGTTCAGCGGCATCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTAAACT-CATTAT--AAA---------------GA-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAATACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124442 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCAGTATTTA-GAATCACGAATTCTGATGACTGTTTACATCAAATATTTCCATTCGCAACTTCTTGGGTTGTTT----ACA-GGGGACCTGTCTGT---AATTTTGCAGCGCCTCTTAACGTTATAATGGGAAGTCAGGAT---TTA----ATACAATGATGACGTTCAGCGGCAGCACAGTCGTAATAGTCT-GGTACCCTGTCCAAATATATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGAAACAAAAAGATATTCGTGACTGACTGCAG-CGGAAACACATATCAAAACATGCATCAAATTCTAAAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGATACGAAGAGACAAGACTTATGTAACTGTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGA-------ACAAATTTCAAAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124441 : CGCAATGGTGGTAGCTGACCT------------------------TGTGCAAGGCTGTTTTTA-GAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCACAACTTCTTGAGTTGTTT----ACA-GGGGGCCTGTCTGT---AATTTTGCAGCGCCACTGAACGTTATAAGGGGAAGTTGGGCT---TTA----TTACGATGATGATGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCT-CTAAACT-CATTAT--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAACTTCT-AAAAGTACATTTTACGCAGCAAGTAATGTTTAATCGGGCACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCTATTGCATAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATAGCCTTCCATA
gi|124443 : CGCAATGGTGGTAGCTGATCTAAA---------------------TGTGTATGG---TGATAGTAAG------ATTCTGAAGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGTTTGTTTACA-GGGGACCTGTCTGT---AATTTTGCAGCACCACCGAACGTTATAATGGGAAGTTCGGAT---TTG----TTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTATCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAATATATTCGTGACTGATTGCAG-CCGAAACACATATCGAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTTATCTGACACGAAGAGACAAGACGTATGTCACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGATGAAATT-TTT-----CATCTCCC-----ACAA--------AGAACTAAAAAGGAAGAAACATTTACACCCATTGCACAAATAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGGTACCCTTCCATA
gi|124444 : CGCAATGGTGATAGATGACCTAAA---------------------CGTGTAAGGCTGTATTTT-GAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCAGTCACAACTTCTT-----------------------------GT---AATTTTGCAGCGCCACTGAATGTTATAATGGGAAGTTGGGAT---TTA----TTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACTCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------TG-TGGTGAACATTGTTGTAAAAAATTATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAAGACGTGTGTAACTTTTACAAAGATAGAAAATAGT--------AGGATAGGCAAACAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTAGACCCATTGC
gi|124445 : CGCAATGGTGGTGGCTGACCTAAAAGAAACCTCACACTTACCTTTTGTGTAAGGCTGTATTTA-GAGTCACGAATTCTGATGACTGTTTACAGCCAATATTTCCATTCGCAACTTCTTGG-------------------ACCTGTCTGT---AATTTTGCAGCACCACTGAACGTTATAATGGGAAGTTGTGAT---TTA----TTACAATGATGACGTTCAGCGGCAGCACAATCGAAATAGTCC-GGTACCCTGTCCAAAAACATTCC-CTACACT-CATTGC--AAA---------------GG-GGATGAACATTGGAATAAAAATATATTCGTGACTGACTGC-G-CCGAAACACATATTGAAACATACATCAAATTCT-AAAAATACATTTAACGCAGCAAGTAATGTTTCATCTGACACAAAGAGACAAGACGTAT
gi|124446 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGGAAGGCTGTATTTA-GATTCGCGAATTCTGATGA---------GCAAATATTTCCA------ACTTCTTGGGCTGTTT----ACA-TGGGGCCTGTCTGT---AACTTTGCAGCACCACCGAACGTTATAATGGGAAGTTAGGAA---TTA----TTACAATGATGACGTTCAGCGGCAGCACAGTCGAAAAAGTCCGGGTACCCTGTCCAAATACAGTCC-CTA-----CATCAC--AAAGGGGTGGGAGGGGGGGG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAATCACATATCGAAACATACATCAAATCCT-AAAAATACATTTTACGCAGTCATTAATGTTTAATCTGACACGAGGAGACAAGACGTATGTAACTTTTACAATCAT--GATTTCATTTCCCACAAAG--AAACAAAGAAC---TAAG--AAGAAA--GAAACA-TTTACACCCATT--GC-----ACAA--------AGAACAAActttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggtgtaacttttacaatgataggatatagtaagatagacaaatagcaaagttacaaaggtgaaatgtttcatttcccacaaagaactaagaagaaagaaacatttacacccattgcacaaagaataaacgaccaatttcagactaagagttatgacggggatacccttccata
gi|124447 : CGCAATGTTGGTAGCTGACCT------------------------TGTGCAAGGCTGTATTTA-GAGTCGCGAATTCTGATGAAGGTTTACAGCAAATATTTCTATTCGCAACTTCTCGGGTTGTTT----ACAAGTGGACCTGTCAGT---AATTTTGCAGCGCCACTGAACGTTTTAATGGGAAGTTGTGAT---TTA----TTACAATGATGACGTTCATGGGCAGCACAGTC-------T----GTACTCTGTCCAAAcaacaaatttcagactaagaggttatggcggtgatacccttccata
gi|124448 : GCAATGGTGGTGGCTGACCTAAAAGAAACCTCACAATTACCTTTTGTGTAATGCTGTATTAA-GAGTCGCGAGTTCTGATGACTGTTTACAGCAAATATTTCTATTCACAACTTCTATGGTTGTTT----ACA-GGGGACATGTCTAT---AATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGTGAT---TTA----TTACAATGATTAAGTTCAGCGGCAGCACAGTTGAAATAGTCC-TGTACCCTGTTCAAAGACATTCC-CTACACT-CATTAT--AAA---------------GG-GGATGAACATTGGAATAAATAGATATTCGTGACTGACTGCAA-CCGAAACACAT
gi|124449 : CAATGGTGGTCGCTGACCT------------------------TGTGTAAGGCTGTATTTA-GAGTCGTGAATTCTGATGACTGTTTACAGCAAATATTCCCATTCGCAACTTCTTGGGTTGTTT----ACA-GGGGACCTGTCTGT---AATTTTGCAGCGCTACTGAACGTTATAATGGGAAGTTATTATATATGA----TTATA-TGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACCCTGTCCAAATACATTCC-CTACAGT-CATTAC--AAA---------------GG-GAGTGGACATTGGAATAAAAAGAAATTCGTGACTTACTGCAG-CCGAATCACATATCGAAATATACATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----GCAA--------AGAACTAAGAAGAAAGAAACTTTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGA-ATTATCATTGCG----GTGATACCCTTCCATA
gi|124450 : CAATGGTGGTCGCTGACCT------------------------TGTGTA--------TTTA-GAGTCGCAAATTCTGATGACTGTTTACAGCTAATATTCCCATTCGCAACTTCTTGGGTTGTTT----ACA-GGGGACCTGTCTGT---AATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTA--------------TTATAATGATGGTGTTCAGCGGTAGCACAGTCGAAATAGTCC-GGTACCCTGTCAAAATACAC-CC-CTACAGT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCCTGACTGACTGCAG-TCGAAACACTAATTGAAATATATATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAATACGTATGTAACTTTTACAATGACAGGATATAGT--------AGGACAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAATAAACACTTACACCCATTGCACAAAGAACAAACGACACATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACTCTTCCAT
gi|124445 : TGTTTTTGGACA-GGGTACCGGACTATTTCGATTGTGC--TGCCGCTGAACGTCATCATTGTAA--TA--AA---TCACAACTTCCCATTATAACGTTCAGTGG
gi|124451 : cgcaatggtggtggctgacctaaaagaaacctcacacttaccttttgtgtaaggctgtatttagagtcacgaattctgatgactgtttacagccaatatttccattcgcaacttcttggacctgtctgtaattttgcagcaATAGTCT-GGTACCCAGCCCAATTTCATTCCGTTACTCTCCATTACGTAAA---------------GGAGAGT-AAC---GGAATAAAttccctacactcattgcaaaggggatgaacattggaataaaaatatattcgtgactgactgcgccgaaacacatattgaaacatacatcaaattctaaaaatacatttaacgcagcaagtaatgtttcatctgacacaaagagacaagacgtatctttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggtgtaacttttacaatgataggatatagtaagatagacaaatagcaaagttacaaaggtgaaatgtttcatttcccacaaagaactaagaagaaagaaacatttacacccattgcacaaagaataaacgaccaatttcagactaagagttatgacggggatacccttccata
gi|124456 : GACAGGAAGTATGTAACTTTTACAATGATAGGATATAAT--------AGGATAGATAAATAGC---AAAGTTACAAAGGTGAAATA-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAATAACATTTACACCCATTACACAAAGAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124457 : GACTGGAAGTATGTAACTTTTACAATGATAGTATATAGT--------AGGATAGACAAATAGC---AAAGTTATAAAGGTAAAATG-TTT-----CATTTCCA-----ACAA--------TGAACTAAGAAGAAAGAAACATTTACAACCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GCGATACCCTTCCATA
gi|124454 : GACAGAAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATA-TTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCTATTGCACAAAGAACAAATAACAAATTTTAGACTTAAGA-GTT---ATGATG----GTGATACCCATCCATA
gi|124452 : GACAGGAAGTA-----CTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATA-TTT-----CATTTCAC-----ACAA--------AGAGCTAAGAAGAAAGAAACATTTGCACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124453 : GACAGGAAGTATGTAACTTTTACAACGATAGGATAAAGT--------AGGTTAGACAAATAGC---AAAGTAACAAAGGTGAAATA-TTT-----CATTTCCT-----ACAA--------AGAACTAAGAAAAAGGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAT-TTAGA-ATT---ATGGCT----GTGATACCGTTCCATA
gi|124458 : GACAGGAAGTACGTAACTTTTACAATGATAGGTTATAGT--------AGGATAGACAAATAGCGTGAAA--TACAAAGGTGAAATA-TTT-----CATTTCCC-----ACAA--------AGAACGAAGAAGAAAGAAACATTTTCAACCATTGCACAAAGAACAAACGACATATTGCAAAC-TACGA-GTT---ATGGTG----GTGATACCCTTCCAT
gi|124459 : GACAGGAAGTATGTAACTTTTACAATGATAGGGTATAGT--------AGAATAGACAAATAGC---AAAGTTACAAGGGTGAAATA-TTC-----CATTTCCC-----ACAA--------AGAACTAAGTAGAAAGAAACATTTACACCCATTACACAAAGAACAAACGGCAAATT-------------GTT---TTCGCG----ATGATACCTTTCCATA
gi|124455 : GACAGAAAATATGTAACTTTTACAATGATAGGATAAAGT--------AGGATAGACAAATAGC---AAAGTTGCGAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACAC
gi|124461 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATA-TTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124462 : ACAGGAAGTATGTAACCTTTACAATGATAGGATATAGT--------AGGATAGACAATTAGC---AAAGTTACAAAGGTGAAATA-TTT-----CATTTCCA-----TCAA--------AGAACTAAAAAGAAAGAAACATTTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGT-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124464 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AG-ATAGACAAATAGC---AACGTTACAAAGGTGAAATA-TTC-----CATTTCCC-----ACAA--------AGAACTAAGAACAAAGAAACATTTACACCTATTACACAAAGAACAAACGCCAAATTACGAAC-TTAGA-TTT---ATGGCG----GTGATACCCTTCCATA
gi|124460 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGT---AAAGTTACAAAGGTGAAATA-TTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATGTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-CTT---ATGGTGATATATGATACCCTTCCATA
gi|124463 : ACAGGAAGTATGTAACTTTTACAATGACAGGATATAGA--------AGAATAGACAAATAGC---AAAGTTACAAAGGTGAAATA-TTC-----CATTTCCC-----ACAA--------
gi|124465 : GTATGTAACTTTTACAATCATAGGATATAGA--------AGGATAAACAAATAGC---AAAGTTACAAAGGTGAAACA-TTT-----CAATTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGAAAAATTACAAAC-TTAGA-GTA---ATGGCG----GTGATACCCTTCCATA
gi|124445 : TGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATG-TTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAATAAACGACCAATTTCAGAC-TAAGA-GTT---ATGACG----GGGATACCCTTCCATA
gi|124466 : cgcaatggtggtggctgacctaaaagaaacctcacacttaccttttgtgtaaggctgtatttagagtcacgaattctgatgactgtttacagccaatatttccattcgcaacttcttggacctgtctgtaattttgcagcaccactgaacgttataatgggaagttgtgatttattacaatgatgacgttcagcggcagcacaatcgaaatagtccggtaccctgtccaaaaacattccctacactcattgcaaaggggatgaacattggaataaaaatatattcgtgactgactgcgccgaaacacatattgaaacatacatcaaattctaaaaatacatttaacgcagcaagtaatgtttcatctgacacaaagagacaagacgtatctttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggGTAACTTTTACAATGATAGGACATAGT--------AGGATAGACAAATAGT---TAAGTTACAAAGGTGAAATA-ATA-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCAGTGCACAAAGAACAAAC-ACACGT----------AGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124467 : TATAGT--------AGGATAGACACATAGC---AAAGTTACAAAGGTGAAATA-TTT-----CATTTCC------ACAA--------AGAACTTAGAAGAAAGAAACAATTACACCCATTGCACAAAAAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCTTTCCATA
gi|124468 : T--------AGACTAGACAAATAGC---AAAGTTACAAAGGTAAAATG-TTT-----CATTTCTC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCAATTACACAAACAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGTG----GTGATACCCTTCCATA
gi|124469 : TGAACTA-TTT-----CATTTCCTTTCCTACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAATAACAAAAGACAAATTGCAAAC-TGAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124446 : ATGATTT-----CATTTCCC-----ACAAAGAAACAAAGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGAGGTT---ATGGCG----GTGATACCCTTCCATA
Alignments
lowQualScore : 777777777777777777777777 111111111111111
lowQualScore : 000000000000000000000000 6666 3 555 2 3 3 44 999999999999999 3 3 3 2 55555555 222 0 33333 33333 44444444 3 1 1 1 222 3333
lowQualScore : ........................ .... . ... . . . .. ............... . . . . ........ ... . ..... ..... ........ . . . . ... ....
lowQualScore : 111111111111111111111111 5555 1 444 9 1 1 22 222222222222222 1 3 6 0 22222222 555 2 33333 33333 88888888 2 5 4 5 777 3333
consensus : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGANGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
Reference ( family-620 ) : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124438 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTGTTAAAAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGT-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTAGGAT---TCATTACAATGATGACGTTCAGCGGCAGCATAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAA-CCGAAACACATATCGAAACCTGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACAGGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACGAAAGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGACGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124439 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGTTGT----TTACTGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATATGGGGAAGTTGGGAT---TTATTACGATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAGCCCGAAACACATCTCAAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATATAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124440 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTGAGGCTGTATTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGGTGT----TTACTGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAAGGGGAGGTTGGGAT---TTATTACGATGATGACGTTCAGCGGCATCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTAAACT-CATTAT--AAA---------------GA-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAATACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124441 : CGCAATGGTGGTAGCTGACCT------------------------TGTGCAAGGCTGTTTTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCACAACTTCTTGAGTTGT----TTACAGG-GGGCCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAAGGGGAAGTTGGGCT---TTATTACGATGATGATGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCT-CTAAACT-CATTAT--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAACTTCT-AAAAGTACATTTTACGCAGCAAGTAATGTTTAATCGGGCACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCTATTGCATAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATAGCCTTCCATA
gi|124442 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCAGTATTTAGAATCACGAATTCTGATGACTGTTTACATCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCTCTTAACGTTATAATGGGAAGTCAGGAT---TTAATACAATGATGACGTTCAGCGGCAGCACAGTCGTAATAGTCT-GGTACCCTGTCCAAATATATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGAAACAAAAAGATATTCGTGACTGACTGCAG-CGGAAACACATATCAAAACATGCATCAAATTCTAAAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGATACGAAGAGACAAGACTTATGTAACTGTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGA-------ACAAATTTCAAAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124443 : CGCAATGGTGGTAGCTGATCTAAA---------------------TGTGTATGGTGATAGTAAGA--------TTCTGAAGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGTTTGTTTACAGG-GGACCTGTCTGTAATTTTGCAGCACCACCGAACGTTATAATGGGAAGTTCGGAT---TTGTTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTATCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAATATATTCGTGACTGATTGCAG-CCGAAACACATATCGAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTTATCTGACACGAAGAGACAAGACGTATGTCACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGATGAAATTTTT-----CATCTCCC-----ACAA--------AGAACTAAAAAGGAAGAAACATTTACACCCATTGCACAAATAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGGTACCCTTCCATA
gi|124444 : CGCAATGGTGATAGATGACCTAAA---------------------CGTGTAAGGCTGTATTTTGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCAGTCACAACTTCTTG-----------------------------TAATTTTGCAGCGCCACTGAATGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACTCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------TG-TGGTGAACATTGTTGTAAAAAATTATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAAGACGTGTGTAACTTTTACAAAGATAGAAAATAGT--------AGGATAGGCAAACAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTAGACCCATTGC
gi|124445 : CGCAATGGTGGTGGCTGACCTAAAAGAAACCTCACACTTACCTTTTGTGTAAGGCTGTATTTAGAGTCACGAATTCTGATGACTGTTTACAGCCAATATTTCCATTCGCAACTTCTTGG-------------------ACCTGTCTGTAATTTTGCAGCACCACTGAACGTTATAATGGGAAGTTGTGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAATCGAAATAGTCC-GGTACCCTGTCCAAAAACATTCC-CTACACT-CATTGC--AAA---------------GG-GGATGAACATTGGAATAAAAATATATTCGTGACTGACTGC-G-CCGAAACACATATTGAAACATACATCAAATTCT-AAAAATACATTTAACGCAGCAAGTAATGTTTCATCTGACACAAAGAGACAAGACGTAT
gi|124445 : TGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAATAAACGACCAATTTCAGAC-TAAGA-GTT---ATGACG----GGGATACCCTTCCATActttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggtgtaacttttacaatgataggatatagtaagatagacaaatagcaaagttacaaaggtgaaatgtttcatttcccacaaagaactaagaagaaagaaacatttacacccattgcacaaagaataaacgaccaatttcagactaagagttatgacggggatacccttccata
gi|124446 : cgcaatggtggtggctgacctaaaagaaacctcacacttaccttttgtgtaaggctgtatttagagtcacgaattctgatgactgtttacagccaatatttccattcgcaacttcttggacctgtctgtaattttgcagcaccactgaacgttataatgggaagttgtgatttattacaatgatgacgttcagcggcagcacaatcgaaatagtccggtaccctgtccaaaaacattccctacactcattgcaaaggggatgaacattggaataaaaatatattcgtgactgactgcgccgaaacacatattgaaacatacatcaaattctaaaaatacatttaacgcagcaagtaatgtttcatctgacacaaagagacaagacgtatctttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggCGCAATGGTGGTAGCTGACCTAAA---------------------TGTGGAAGGCTGTATTTAGATTCGCGAATTCTGATGA---------GCAAATATTTCCA------ACTTCTTGGGCTGT----TTACATG-GGGCCTGTCTGTAACTTTGCAGCACCACCGAACGTTATAATGGGAAGTTAGGAA---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAAAAGTCCGGGTACCCTGTCCAAATACAGTCC-CTA-----CATCAC--AAAGGGGTGGGAGGGGGGGG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAATCACATATCGAAACATACATCAAATCCT-AAAAATACATTTTACGCAGTCATTAATGTTTAATCTGACACGAGGAGACAAGACGTATGTAACTTTTACAATCAT--GATTTCATTTCCCACAAAG--AAACAAAGAAC---TAAG-AAGAAA---GAAACATTTACACCCATT--GC-----ACAA--------AGAACAAACAACAAA
gi|124446 : TTACAATCATGA----TTT-----CATTTCCC-----ACAAAGAAACAAAGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGAGGTT---ATGGCG----GTGATACCCTTCCATAtttcagactaagaggttatggcggtgatacccttccata
gi|124447 : cgcaatggtggtagctgacctaaatgtggaaggctgtatttagattcgcgaattctgatgagcaaatatttccaacttcttgggctgtttacatggggcctgtctgtaactttgcagcaccaccgaacgttataatgggaagttaggaattattacaatgatgacgttcagcggcagcacagtcgaaaaagtccgggtaccctgtccaaatacagtccctacatcacaaaggggtgggagggggggggggtgaacattggaataaaaagatattcgtgactgactgcagccgaatcacatatcgaaacatacatcaaatcctaaaaatacattttacgcagtcattaatgtttaatctgacacgaggagacaagacgtatgtaacttCGCAATGTTGGTAGCTGACCT------------------------TGTGCAAGGCTGTATTTAGAGTCGCGAATTCTGATGAAGGTTTACAGCAAATATTTCTATTCGCAACTTCTCGGGTTGT----TTACAAGTGGACCTGTCAGTAATTTTGCAGCGCCACTGAACGTTTTAATGGGAAGTTGTGAT---TTATTACAATGATGACGTTCATGGGCAGCACAGTC-------T----GTACTCTGTCCAAA
gi|124448 : GCAATGGTGGTGGCTGACCTAAAAGAAACCTCACAATTACCTTTTGTGTAATGCTGTATTAAGAGTCGCGAGTTCTGATGACTGTTTACAGCAAATATTTCTATTCACAACTTCTATGGTTGT----TTACAGG-GGACATGTCTATAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGTGAT---TTATTACAATGATTAAGTTCAGCGGCAGCACAGTTGAAATAGTCC-TGTACCCTGTTCAAAGACATTCC-CTACACT-CATTAT--AAA---------------GG-GGATGAACATTGGAATAAATAGATATTCGTGACTGACTGCAA-CCGAAACACAT
gi|124449 : CAATGGTGGTCGCTGACCT------------------------TGTGTAAGGCTGTATTTAGAGTCGTGAATTCTGATGACTGTTTACAGCAAATATTCCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCTACTGAACGTTATAATGGGAAGTTATTATATATGATTATA-TGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACCCTGTCCAAATACATTCC-CTACAGT-CATTAC--AAA---------------GG-GAGTGGACATTGGAATAAAAAGAAATTCGTGACTTACTGCAG-CCGAATCACATATCGAAATATACATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----GCAA--------AGAACTAAGAAGAAAGAAACTTTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGA-ATTATCATTGCG----GTGATACCCTTCCATA
gi|124450 : CAATGGTGGTCGCTGACCT------------------------TG--------TGTATTTAGAGTCGCAAATTCTGATGACTGTTTACAGCTAATATTCCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAG----------TTATTATAATGATGGTGTTCAGCGGTAGCACAGTCGAAATAGTCC-GGTACCCTGTCAAAATACA-CCC-CTACAGT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCCTGACTGACTGCAG-TCGAAACACTAATTGAAATATATATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAATACGTATGTAACTTTTACAATGACAGGATATAGT--------AGGACAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAATAAACACTTACACCCATTGCACAAAGAACAAACGACACATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACTCTTCCAT
gi|124451 : ATAGTCT-GGTACCCAGCCCAATTTCATTCCGTTACTCTCCATTACGTAAA---------------GGAGAGT-AAC---GGAATAAA
gi|124452 : GACAGGAAGTA-----CTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCAC-----ACAA--------AGAGCTAAGAAGAAAGAAACATTTGCACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124453 : GACAGGAAGTATGTAACTTTTACAACGATAGGATAAAGT--------AGGTTAGACAAATAGC---AAAGTAACAAAGGTGAAATATTT-----CATTTCCT-----ACAA--------AGAACTAAGAAAAAGGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAT-TTAGA-ATT---ATGGCT----GTGATACCGTTCCATA
gi|124454 : GACAGAAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCTATTGCACAAAGAACAAATAACAAATTTTAGACTTAAGA-GTT---ATGATG----GTGATACCCATCCATA
gi|124455 : GACAGAAAATATGTAACTTTTACAATGATAGGATAAAGT--------AGGATAGACAAATAGC---AAAGTTGCGAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACAC
gi|124456 : GACAGGAAGTATGTAACTTTTACAATGATAGGATATAAT--------AGGATAGATAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAATAACATTTACACCCATTACACAAAGAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124457 : GACTGGAAGTATGTAACTTTTACAATGATAGTATATAGT--------AGGATAGACAAATAGC---AAAGTTATAAAGGTAAAATGTTT-----CATTTCCA-----ACAA--------TGAACTAAGAAGAAAGAAACATTTACAACCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GCGATACCCTTCCATA
gi|124458 : GACAGGAAGTACGTAACTTTTACAATGATAGGTTATAGT--------AGGATAGACAAATAGCGTGAAA--TACAAAGGTGAAATATTT-----CATTTCCC-----ACAA--------AGAACGAAGAAGAAAGAAACATTTTCAACCATTGCACAAAGAACAAACGACATATTGCAAAC-TACGA-GTT---ATGGTG----GTGATACCCTTCCAT
gi|124459 : GACAGGAAGTATGTAACTTTTACAATGATAGGGTATAGT--------AGAATAGACAAATAGC---AAAGTTACAAGGGTGAAATATTC-----CATTTCCC-----ACAA--------AGAACTAAGTAGAAAGAAACATTTACACCCATTACACAAAGAACAAACGGCAAATT-------------GTT---TTCGCG----ATGATACCTTTCCATA
gi|124460 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGT---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATGTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-CTT---ATGGTGATATATGATACCCTTCCATA
gi|124461 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124462 : ACAGGAAGTATGTAACCTTTACAATGATAGGATATAGT--------AGGATAGACAATTAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAAAAGAAAGAAACATTTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGT-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124463 : ACAGGAAGTATGTAACTTTTACAATGACAGGATATAGA--------AGAATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTC-----CATTTCCC-----ACAA--------
gi|124464 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AG-ATAGACAAATAGC---AACGTTACAAAGGTGAAATATTC-----CATTTCCC-----ACAA--------AGAACTAAGAACAAAGAAACATTTACACCTATTACACAAAGAACAAACGCCAAATTACGAAC-TTAGA-TTT---ATGGCG----GTGATACCCTTCCATA
gi|124465 : GTATGTAACTTTTACAATCATAGGATATAGA--------AGGATAAACAAATAGC---AAAGTTACAAAGGTGAAACATTT-----CAATTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGAAAAATTACAAAC-TTAGA-GTA---ATGGCG----GTGATACCCTTCCATA
gi|124466 : GTAACTTTTACAATGATAGGACATAGT--------AGGATAGACAAATAGT---TAAGTTACAAAGGTGAAATAATA-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCAGTGCACAAAGAACAAAC-ACACGT----------AGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124467 : TATAGT--------AGGATAGACACATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCC------ACAA--------AGAACTTAGAAGAAAGAAACAATTACACCCATTGCACAAAAAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCTTTCCATA
gi|124468 : T--------AGACTAGACAAATAGC---AAAGTTACAAAGGTAAAATGTTT-----CATTTCTC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCAATTACACAAACAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGTG----GTGATACCCTTCCATA
gi|124469 : TGAACTATTT-----CATTTCCTTTCCTACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAATAACAAAAGACAAATTGCAAAC-TGAGA-GTT---ATGGCG----GTGATACCCTTCCATA
Alignments
lowQualScore : 777777777777777777777777 111111111111111
lowQualScore : 000000000000000000000000 6666 3 555 2 3 3 44 999999999999999 3 3 3 1 55555555 222 0 33333 33333 44444444 3 1 1 1 222 3333
lowQualScore : ........................ .... . ... . . . .. ............... . . . . ........ ... . ..... ..... ........ . . . . ... ....
lowQualScore : 111111111111111111111111 5555 1 444 9 1 1 22 222222222222222 1 3 6 0 22222222 555 2 33333 33333 88888888 2 5 4 5 777 3333
consensus : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGANGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
Reference ( family-620 ) : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGANGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124438 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTGTTAAAAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGT-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTAGGAT---TCATTACAATGATGACGTTCAGCGGCAGCATAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAA-CCGAAACACATATCGAAACCTGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACAGGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACGAAAGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGACGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124439 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGTTGT----TTACTGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATATGGGGAAGTTGGGAT---TTATTACGATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAGCCCGAAACACATCTCAAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATATAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124440 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTGAGGCTGTATTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGGTGT----TTACTGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAAGGGGAGGTTGGGAT---TTATTACGATGATGACGTTCAGCGGCATCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTAAACT-CATTAT--AAA---------------GA-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAATACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124441 : CGCAATGGTGGTAGCTGACCT------------------------TGTGCAAGGCTGTTTTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCACAACTTCTTGAGTTGT----TTACAGG-GGGCCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAAGGGGAAGTTGGGCT---TTATTACGATGATGATGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCT-CTAAACT-CATTAT--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAACTTCT-AAAAGTACATTTTACGCAGCAAGTAATGTTTAATCGGGCACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCTATTGCATAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATAGCCTTCCATA
gi|124442 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCAGTATTTAGAATCACGAATTCTGATGACTGTTTACATCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCTCTTAACGTTATAATGGGAAGTCAGGAT---TTAATACAATGATGACGTTCAGCGGCAGCACAGTCGTAATAGTCT-GGTACCCTGTCCAAATATATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGAAACAAAAAGATATTCGTGACTGACTGCAG-CGGAAACACATATCAAAACATGCATCAAATTCTAAAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGATACGAAGAGACAAGACTTATGTAACTGTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGA-------ACAAATTTCAAAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124443 : CGCAATGGTGGTAGCTGATCTAAA---------------------TGTGTATGGTGATAGTAAGA--------TTCTGAAGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGTTTGTTTACAGG-GGACCTGTCTGTAATTTTGCAGCACCACCGAACGTTATAATGGGAAGTTCGGAT---TTGTTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTATCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAATATATTCGTGACTGATTGCAG-CCGAAACACATATCGAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTTATCTGACACGAAGAGACAAGACGTATGTCACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGATGAAATTTTT-----CATCTCCC-----ACAA--------AGAACTAAAAAGGAAGAAACATTTACACCCATTGCACAAATAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGGTACCCTTCCATA
gi|124444 : CGCAATGGTGATAGATGACCTAAA---------------------CGTGTAAGGCTGTATTTTGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCAGTCACAACTTCTTG-----------------------------TAATTTTGCAGCGCCACTGAATGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACTCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------TG-TGGTGAACATTGTTGTAAAAAATTATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAAGACGTGTGTAACTTTTACAAAGATAGAAAATAGT--------AGGATAGGCAAACAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTAGACCCATTGC
gi|124445 : CGCAATGGTGGTGGCTGACCTAAAAGAAACCTCACACTTACCTTTTGTGTAAGGCTGTATTTAGAGTCACGAATTCTGATGACTGTTTACAGCCAATATTTCCATTCGCAACTTCTTGG-------------------ACCTGTCTGTAATTTTGCAGCACCACTGAACGTTATAATGGGAAGTTGTGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAATCGAAATAGTCC-GGTACCCTGTCCAAAAACATTCC-CTACACT-CATTGC--AAA---------------GG-GGATGAACATTGGAATAAAAATATATTCGTGACTGACTGC-G-CCGAAACACATATTGAAACATACATCAAATTCT-AAAAATACATTTAACGCAGCAAGTAATGTTTCATCTGACACAAAGAGACAAGACGTAT
gi|124445 : TGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAATAAACGACCAATTTCAGAC-TAAGA-GTT---ATGACG----GGGATACCCTTCCATActttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggtgtaacttttacaatgataggatatagtaagatagacaaatagcaaagttacaaaggtgaaatgtttcatttcccacaaagaactaagaagaaagaaacatttacacccattgcacaaagaataaacgaccaatttcagactaagagttatgacggggatacccttccata
gi|124446 : cgcaatggtggtggctgacctaaaagaaacctcacacttaccttttgtgtaaggctgtatttagagtcacgaattctgatgactgtttacagccaatatttccattcgcaacttcttggacctgtctgtaattttgcagcaccactgaacgttataatgggaagttgtgatttattacaatgatgacgttcagcggcagcacaatcgaaatagtccggtaccctgtccaaaaacattccctacactcattgcaaaggggatgaacattggaataaaaatatattcgtgactgactgcgccgaaacacatattgaaacatacatcaaattctaaaaatacatttaacgcagcaagtaatgtttcatctgacacaaagagacaagacgtatctttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggCGCAATGGTGGTAGCTGACCTAAA---------------------TGTGGAAGGCTGTATTTAGATTCGCGAATTCTGATGA---------GCAAATATTTCCA------ACTTCTTGGGCTGT----TTACATG-GGGCCTGTCTGTAACTTTGCAGCACCACCGAACGTTATAATGGGAAGTTAGGAA---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAAAAGTCCGGGTACCCTGTCCAAATACAGTCC-CTA-----CATCAC--AAAGGGGTGGGAGGGGGGGG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAATCACATATCGAAACATACATCAAATCCT-AAAAATACATTTTACGCAGTCATTAATGTTTAATCTGACACGAGGAGACAAGACGTATGTAACTTTTACAATCAT--GATTTCATTTCCCACAAAG--AAACAAAGAAC---TAAG-AAGAAA---GAAACATTTACACCCATT--GC-----ACAA--------AGAACAAACAACAAA
gi|124446 : TTACAATCATGA----TTT-----CATTTCCC-----ACAAAGAAACAAAGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGAGGTT---ATGGCG----GTGATACCCTTCCATAtttcagactaagaggttatggcggtgatacccttccata
gi|124447 : cgcaatggtggtagctgacctaaatgtggaaggctgtatttagattcgcgaattctgatgagcaaatatttccaacttcttgggctgtttacatggggcctgtctgtaactttgcagcaccaccgaacgttataatgggaagttaggaattattacaatgatgacgttcagcggcagcacagtcgaaaaagtccgggtaccctgtccaaatacagtccctacatcacaaaggggtgggagggggggggggtgaacattggaataaaaagatattcgtgactgactgcagccgaatcacatatcgaaacatacatcaaatcctaaaaatacattttacgcagtcattaatgtttaatctgacacgaggagacaagacgtatgtaacttCGCAATGTTGGTAGCTGACCT------------------------TGTGCAAGGCTGTATTTAGAGTCGCGAATTCTGATGAAGGTTTACAGCAAATATTTCTATTCGCAACTTCTCGGGTTGT----TTACAAGTGGACCTGTCAGTAATTTTGCAGCGCCACTGAACGTTTTAATGGGAAGTTGTGAT---TTATTACAATGATGACGTTCATGGGCAGCACAGTC-------T----GTACTCTGTCCAAA
gi|124448 : GCAATGGTGGTGGCTGACCTAAAAGAAACCTCACAATTACCTTTTGTGTAATGCTGTATTAAGAGTCGCGAGTTCTGATGACTGTTTACAGCAAATATTTCTATTCACAACTTCTATGGTTGT----TTACAGG-GGACATGTCTATAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGTGAT---TTATTACAATGATTAAGTTCAGCGGCAGCACAGTTGAAATAGTCC-TGTACCCTGTTCAAAGACATTCC-CTACACT-CATTAT--AAA---------------GG-GGATGAACATTGGAATAAATAGATATTCGTGACTGACTGCAA-CCGAAACACAT
gi|124449 : CAATGGTGGTCGCTGACCT------------------------TGTGTAAGGCTGTATTTAGAGTCGTGAATTCTGATGACTGTTTACAGCAAATATTCCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCTACTGAACGTTATAATGGGAAGTTATTATATATGATTATA-TGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACCCTGTCCAAATACATTCC-CTACAGT-CATTAC--AAA---------------GG-GAGTGGACATTGGAATAAAAAGAAATTCGTGACTTACTGCAG-CCGAATCACATATCGAAATATACATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----GCAA--------AGAACTAAGAAGAAAGAAACTTTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGA-ATTATCATTGCG----GTGATACCCTTCCATA
gi|124450 : CAATGGTGGTCGCTGACCT------------------------TG--------TGTATTTAGAGTCGCAAATTCTGATGACTGTTTACAGCTAATATTCCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAG----------TTATTATAATGATGGTGTTCAGCGGTAGCACAGTCGAAATAGTCC-GGTACCCTGTCAAAATACA-CCC-CTACAGT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCCTGACTGACTGCAG-TCGAAACACTAATTGAAATATATATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAATACGTATGTAACTTTTACAATGACAGGATATAGT--------AGGACAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAATAAACACTTACACCCATTGCACAAAGAACAAACGACACATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACTCTTCCAT
gi|124451 : ATAGTCT-GGTACCCAGCCCAATTTCATTCCGTTACTCTCCATTACGTAAA---------------GGAGAGT-AAC---GGAATAAA
gi|124452 : GACAGGAAGTA-----CTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCAC-----ACAA--------AGAGCTAAGAAGAAAGAAACATTTGCACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124453 : GACAGGAAGTATGTAACTTTTACAACGATAGGATAAAGT--------AGGTTAGACAAATAGC---AAAGTAACAAAGGTGAAATATTT-----CATTTCCT-----ACAA--------AGAACTAAGAAAAAGGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAT-TTAGA-ATT---ATGGCT----GTGATACCGTTCCATA
gi|124454 : GACAGAAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCTATTGCACAAAGAACAAATAACAAATTTTAGACTTAAGA-GTT---ATGATG----GTGATACCCATCCATA
gi|124455 : GACAGAAAATATGTAACTTTTACAATGATAGGATAAAGT--------AGGATAGACAAATAGC---AAAGTTGCGAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACAC
gi|124456 : GACAGGAAGTATGTAACTTTTACAATGATAGGATATAAT--------AGGATAGATAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAATAACATTTACACCCATTACACAAAGAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124457 : GACTGGAAGTATGTAACTTTTACAATGATAGTATATAGT--------AGGATAGACAAATAGC---AAAGTTATAAAGGTAAAATGTTT-----CATTTCCA-----ACAA--------TGAACTAAGAAGAAAGAAACATTTACAACCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GCGATACCCTTCCATA
gi|124458 : GACAGGAAGTACGTAACTTTTACAATGATAGGTTATAGT--------AGGATAGACAAATAGCGTGAAA--TACAAAGGTGAAATATTT-----CATTTCCC-----ACAA--------AGAACGAAGAAGAAAGAAACATTTTCAACCATTGCACAAAGAACAAACGACATATTGCAAAC-TACGA-GTT---ATGGTG----GTGATACCCTTCCAT
gi|124459 : GACAGGAAGTATGTAACTTTTACAATGATAGGGTATAGT--------AGAATAGACAAATAGC---AAAGTTACAAGGGTGAAATATTC-----CATTTCCC-----ACAA--------AGAACTAAGTAGAAAGAAACATTTACACCCATTACACAAAGAACAAACGGCAAATT-------------GTT---TTCGCG----ATGATACCTTTCCATA
gi|124460 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGT---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATGTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-CTT---ATGGTGATATATGATACCCTTCCATA
gi|124461 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124462 : ACAGGAAGTATGTAACCTTTACAATGATAGGATATAGT--------AGGATAGACAATTAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAAAAGAAAGAAACATTTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGT-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124463 : ACAGGAAGTATGTAACTTTTACAATGACAGGATATAGA--------AGAATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTC-----CATTTCCC-----ACAA--------
gi|124464 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AG-ATAGACAAATAGC---AACGTTACAAAGGTGAAATATTC-----CATTTCCC-----ACAA--------AGAACTAAGAACAAAGAAACATTTACACCTATTACACAAAGAACAAACGCCAAATTACGAAC-TTAGA-TTT---ATGGCG----GTGATACCCTTCCATA
gi|124465 : GTATGTAACTTTTACAATCATAGGATATAGA--------AGGATAAACAAATAGC---AAAGTTACAAAGGTGAAACATTT-----CAATTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGAAAAATTACAAAC-TTAGA-GTA---ATGGCG----GTGATACCCTTCCATA
gi|124466 : GTAACTTTTACAATGATAGGACATAGT--------AGGATAGACAAATAGT---TAAGTTACAAAGGTGAAATAATA-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCAGTGCACAAAGAACAAAC-ACACGT----------AGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124467 : TATAGT--------AGGATAGACACATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCC------ACAA--------AGAACTTAGAAGAAAGAAACAATTACACCCATTGCACAAAAAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCTTTCCATA
gi|124468 : T--------AGACTAGACAAATAGC---AAAGTTACAAAGGTAAAATGTTT-----CATTTCTC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCAATTACACAAACAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGTG----GTGATACCCTTCCATA
gi|124469 : TGAACTATTT-----CATTTCCTTTCCTACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAATAACAAAAGACAAATTGCAAAC-TGAGA-GTT---ATGGCG----GTGATACCCTTCCATA
blockSeqs : AAAAGAAACCTCACACTTACCTTT TTGT T ATA G G C GT GGGGTGGGAGGGGGG A C A C TTCCCACA GTG ACACC TTCCT AGAAACAA T T A G ATC ATAT
blockSeqs : AAAAGAAACCTCACAATTACCTTT . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : AAA . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : AAA . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : AAA . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : AAA . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : . . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : . . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : . . . . . . . . . . . . C . . . . . T . A . . .
blockSeqs : . . . . . . . . . . . . C . . . . . G . T . . .
blockSeqs : . . . . . . . . . . . A . . . . . G . T . . .
blockSeqs : . . . . . . . . . . A . . . . . T . A . . .
blockSeqs : . A . . . . . T . A . . .
blockSeqs : A . . . . . T . A . . .
blockSeqs : A . . . . . G . A . . .
blockSeqs : A . . . . . G . T . . .
blockSeqs : A . . . . . G . T . . .
blockSeqs : A . . . . . G . T . . .
blockSeqs : A . . . . . A . T . . .
blockSeqs : A . . . . . A . T . . .
blockSeqs : A . . . . . G . T . . .
blockSeqs : A . . . . . T . A . . .
blockSeqs : A . . . . . G . G . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqCons : AAA*********************
originalCons : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGANGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
finalCons : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGANGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
Alignments
lowQualScore : 777777777777777777777777 111111111111111
lowQualScore : 000000000000000000000000 6666 3 555 2 3 3 44 999999999999999 3 3 3 1 55555555 222 0 33333 33333 44444444 3 1 1 1 222 3333
lowQualScore : ........................ .... . ... . . . .. ............... . . . . ........ ... . ..... ..... ........ . . . . ... ....
lowQualScore : 111111111111111111111111 5555 1 444 9 1 1 22 222222222222222 1 3 6 0 22222222 555 2 33333 33333 88888888 2 5 4 5 777 3333
consensus : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGANGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
Reference ( family-620 ) : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAGGANGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124438 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCTGTGTTAAAAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGT-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTAGGAT---TCATTACAATGATGACGTTCAGCGGCAGCATAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAA-CCGAAACACATATCGAAACCTGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACAGGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACGAAAGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGACGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124439 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTAAGGCTGTATTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGTTGT----TTACTGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATATGGGGAAGTTGGGAT---TTATTACGATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAGCCCGAAACACATCTCAAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATATAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124440 : CGCAATGGTGGTAGCTGACCT------------------------TGTGTGAGGCTGTATTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCGCAACTTCTTGAGGTGT----TTACTGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAAGGGGAGGTTGGGAT---TTATTACGATGATGACGTTCAGCGGCATCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCC-CTAAACT-CATTAT--AAA---------------GA-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAATACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCGGACACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124441 : CGCAATGGTGGTAGCTGACCT------------------------TGTGCAAGGCTGTTTTTAGAGTCGCGAATTCTGATGACTATTTACAGCAAATATTCCCATTCACAACTTCTTGAGTTGT----TTACAGG-GGGCCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAAGGGGAAGTTGGGCT---TTATTACGATGATGATGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTACCCTGTCCAAATACATTCT-CTAAACT-CATTAT--AAA---------------GG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAACTTCT-AAAAGTACATTTTACGCAGCAAGTAATGTTTAATCGGGCACGAATAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCTATTGCATAAAGAACAAACGACAAATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATAGCCTTCCATA
gi|124442 : CGCAATGGTGGTAGCTGACCTAAA---------------------TGTGTAAGGCAGTATTTAGAATCACGAATTCTGATGACTGTTTACATCAAATATTTCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCTCTTAACGTTATAATGGGAAGTCAGGAT---TTAATACAATGATGACGTTCAGCGGCAGCACAGTCGTAATAGTCT-GGTACCCTGTCCAAATATATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGAAACAAAAAGATATTCGTGACTGACTGCAG-CGGAAACACATATCAAAACATGCATCAAATTCTAAAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGATACGAAGAGACAAGACTTATGTAACTGTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGA-------ACAAATTTCAAAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124443 : CGCAATGGTGGTAGCTGATCTAAA---------------------TGTGTATGGTGATAGTAAGA--------TTCTGAAGACTGTTTACAGCAAATATTTCCATTCGCAACTTCTTGGGTTGTTTGTTTACAGG-GGACCTGTCTGTAATTTTGCAGCACCACCGAACGTTATAATGGGAAGTTCGGAT---TTGTTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-GGTATCCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAATATATTCGTGACTGATTGCAG-CCGAAACACATATCGAAACATGCATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTTATCTGACACGAAGAGACAAGACGTATGTCACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGATGAAATTTTT-----CATCTCCC-----ACAA--------AGAACTAAAAAGGAAGAAACATTTACACCCATTGCACAAATAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGGTACCCTTCCATA
gi|124444 : CGCAATGGTGATAGATGACCTAAA---------------------CGTGTAAGGCTGTATTTTGAGTCGCGAATTCTGATGACTGTTTACAGCAAATATTTCCAGTCACAACTTCTTG-----------------------------TAATTTTGCAGCGCCACTGAATGTTATAATGGGAAGTTGGGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACTCTGTCCAAATACATTCC-CTACACT-CATTAC--AAA---------------TG-TGGTGAACATTGTTGTAAAAAATTATTCGTGACTGACTGCAG-CCGAAACACATATCGAAACATACATCAAATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATCTGACACGAAGAGACAAGACGTGTGTAACTTTTACAAAGATAGAAAATAGT--------AGGATAGGCAAACAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTAGACCCATTGC
gi|124445 : CGCAATGGTGGTGGCTGACCTAAAAGAAACCTCACACTTACCTTTTGTGTAAGGCTGTATTTAGAGTCACGAATTCTGATGACTGTTTACAGCCAATATTTCCATTCGCAACTTCTTGG-------------------ACCTGTCTGTAATTTTGCAGCACCACTGAACGTTATAATGGGAAGTTGTGAT---TTATTACAATGATGACGTTCAGCGGCAGCACAATCGAAATAGTCC-GGTACCCTGTCCAAAAACATTCC-CTACACT-CATTGC--AAA---------------GG-GGATGAACATTGGAATAAAAATATATTCGTGACTGACTGC-G-CCGAAACACATATTGAAACATACATCAAATTCT-AAAAATACATTTAACGCAGCAAGTAATGTTTCATCTGACACAAAGAGACAAGACGTAT
gi|124445 : TGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAATAAACGACCAATTTCAGAC-TAAGA-GTT---ATGACG----GGGATACCCTTCCATActttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggtgtaacttttacaatgataggatatagtaagatagacaaatagcaaagttacaaaggtgaaatgtttcatttcccacaaagaactaagaagaaagaaacatttacacccattgcacaaagaataaacgaccaatttcagactaagagttatgacggggatacccttccata
gi|124446 : cgcaatggtggtggctgacctaaaagaaacctcacacttaccttttgtgtaaggctgtatttagagtcacgaattctgatgactgtttacagccaatatttccattcgcaacttcttggacctgtctgtaattttgcagcaccactgaacgttataatgggaagttgtgatttattacaatgatgacgttcagcggcagcacaatcgaaatagtccggtaccctgtccaaaaacattccctacactcattgcaaaggggatgaacattggaataaaaatatattcgtgactgactgcgccgaaacacatattgaaacatacatcaaattctaaaaatacatttaacgcagcaagtaatgtttcatctgacacaaagagacaagacgtatctttatcttcatcttccggtcaaaggtcaggagtcttcttagactaaagttgacctggCGCAATGGTGGTAGCTGACCTAAA---------------------TGTGGAAGGCTGTATTTAGATTCGCGAATTCTGATGA---------GCAAATATTTCCA------ACTTCTTGGGCTGT----TTACATG-GGGCCTGTCTGTAACTTTGCAGCACCACCGAACGTTATAATGGGAAGTTAGGAA---TTATTACAATGATGACGTTCAGCGGCAGCACAGTCGAAAAAGTCCGGGTACCCTGTCCAAATACAGTCC-CTA-----CATCAC--AAAGGGGTGGGAGGGGGGGG-GGGTGAACATTGGAATAAAAAGATATTCGTGACTGACTGCAG-CCGAATCACATATCGAAACATACATCAAATCCT-AAAAATACATTTTACGCAGTCATTAATGTTTAATCTGACACGAGGAGACAAGACGTATGTAACTTTTACAATCAT--GATTTCATTTCCCACAAAG--AAACAAAGAAC---TAAG-AAGAAA---GAAACATTTACACCCATT--GC-----ACAA--------AGAACAAACAACAAA
gi|124446 : TTACAATCATGA----TTT-----CATTTCCC-----ACAAAGAAACAAAGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGAGGTT---ATGGCG----GTGATACCCTTCCATAtttcagactaagaggttatggcggtgatacccttccata
gi|124447 : cgcaatggtggtagctgacctaaatgtggaaggctgtatttagattcgcgaattctgatgagcaaatatttccaacttcttgggctgtttacatggggcctgtctgtaactttgcagcaccaccgaacgttataatgggaagttaggaattattacaatgatgacgttcagcggcagcacagtcgaaaaagtccgggtaccctgtccaaatacagtccctacatcacaaaggggtgggagggggggggggtgaacattggaataaaaagatattcgtgactgactgcagccgaatcacatatcgaaacatacatcaaatcctaaaaatacattttacgcagtcattaatgtttaatctgacacgaggagacaagacgtatgtaacttCGCAATGTTGGTAGCTGACCT------------------------TGTGCAAGGCTGTATTTAGAGTCGCGAATTCTGATGAAGGTTTACAGCAAATATTTCTATTCGCAACTTCTCGGGTTGT----TTACAAGTGGACCTGTCAGTAATTTTGCAGCGCCACTGAACGTTTTAATGGGAAGTTGTGAT---TTATTACAATGATGACGTTCATGGGCAGCACAGTC-------T----GTACTCTGTCCAAA
gi|124448 : GCAATGGTGGTGGCTGACCTAAAAGAAACCTCACAATTACCTTTTGTGTAATGCTGTATTAAGAGTCGCGAGTTCTGATGACTGTTTACAGCAAATATTTCTATTCACAACTTCTATGGTTGT----TTACAGG-GGACATGTCTATAATTTTGCAGCGCCACTGAACGTTATAATGGGAAGTTGTGAT---TTATTACAATGATTAAGTTCAGCGGCAGCACAGTTGAAATAGTCC-TGTACCCTGTTCAAAGACATTCC-CTACACT-CATTAT--AAA---------------GG-GGATGAACATTGGAATAAATAGATATTCGTGACTGACTGCAA-CCGAAACACAT
gi|124449 : CAATGGTGGTCGCTGACCT------------------------TGTGTAAGGCTGTATTTAGAGTCGTGAATTCTGATGACTGTTTACAGCAAATATTCCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCTACTGAACGTTATAATGGGAAGTTATTATATATGATTATA-TGATGACGTTCAGCGGCAGCACAGTCGAAATAGTCC-AGTACCCTGTCCAAATACATTCC-CTACAGT-CATTAC--AAA---------------GG-GAGTGGACATTGGAATAAAAAGAAATTCGTGACTTACTGCAG-CCGAATCACATATCGAAATATACATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAAGACGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----GCAA--------AGAACTAAGAAGAAAGAAACTTTTACACCCATTGCACAAAGAACAAACAACAAATTTCAGAC-TAAGA-ATTATCATTGCG----GTGATACCCTTCCATA
gi|124450 : CAATGGTGGTCGCTGACCT------------------------TG--------TGTATTTAGAGTCGCAAATTCTGATGACTGTTTACAGCTAATATTCCCATTCGCAACTTCTTGGGTTGT----TTACAGG-GGACCTGTCTGTAATTTTGCAGCGCCACTGAACGTTATAATGGGAAG----------TTATTATAATGATGGTGTTCAGCGGTAGCACAGTCGAAATAGTCC-GGTACCCTGTCAAAATACA-CCC-CTACAGT-CATTAC--AAA---------------GG-GAGTGAACATTGGAATAAAAAGATATTCCTGACTGACTGCAG-TCGAAACACTAATTGAAATATATATCATATTCT-AAAAATACATTTTACGCAGCAAGTAATGTTTAATTTGACACGAAGAGACAATACGTATGTAACTTTTACAATGACAGGATATAGT--------AGGACAGACAAATAGC---AAAGTTACAAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAATAAACACTTACACCCATTGCACAAAGAACAAACGACACATTTCAGAC-TAAGA-ATT---ATGGCG----GTGATACTCTTCCAT
gi|124451 : ATAGTCT-GGTACCCAGCCCAATTTCATTCCGTTACTCTCCATTACGTAAA---------------GGAGAGT-AAC---GGAATAAA
gi|124452 : GACAGGAAGTA-----CTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCAC-----ACAA--------AGAGCTAAGAAGAAAGAAACATTTGCACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124453 : GACAGGAAGTATGTAACTTTTACAACGATAGGATAAAGT--------AGGTTAGACAAATAGC---AAAGTAACAAAGGTGAAATATTT-----CATTTCCT-----ACAA--------AGAACTAAGAAAAAGGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAT-TTAGA-ATT---ATGGCT----GTGATACCGTTCCATA
gi|124454 : GACAGAAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCTATTGCACAAAGAACAAATAACAAATTTTAGACTTAAGA-GTT---ATGATG----GTGATACCCATCCATA
gi|124455 : GACAGAAAATATGTAACTTTTACAATGATAGGATAAAGT--------AGGATAGACAAATAGC---AAAGTTGCGAAGGTGAAATGTTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACAC
gi|124456 : GACAGGAAGTATGTAACTTTTACAATGATAGGATATAAT--------AGGATAGATAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAATAACATTTACACCCATTACACAAAGAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124457 : GACTGGAAGTATGTAACTTTTACAATGATAGTATATAGT--------AGGATAGACAAATAGC---AAAGTTATAAAGGTAAAATGTTT-----CATTTCCA-----ACAA--------TGAACTAAGAAGAAAGAAACATTTACAACCATTGCACAAAGAACAAACGACAAATTTCAGAC-TAAGA-GTT---ATGGCG----GCGATACCCTTCCATA
gi|124458 : GACAGGAAGTACGTAACTTTTACAATGATAGGTTATAGT--------AGGATAGACAAATAGCGTGAAA--TACAAAGGTGAAATATTT-----CATTTCCC-----ACAA--------AGAACGAAGAAGAAAGAAACATTTTCAACCATTGCACAAAGAACAAACGACATATTGCAAAC-TACGA-GTT---ATGGTG----GTGATACCCTTCCAT
gi|124459 : GACAGGAAGTATGTAACTTTTACAATGATAGGGTATAGT--------AGAATAGACAAATAGC---AAAGTTACAAGGGTGAAATATTC-----CATTTCCC-----ACAA--------AGAACTAAGTAGAAAGAAACATTTACACCCATTACACAAAGAACAAACGGCAAATT-------------GTT---TTCGCG----ATGATACCTTTCCATA
gi|124460 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AGGATAGACAAATAGT---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATGTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-CTT---ATGGTGATATATGATACCCTTCCATA
gi|124461 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AAGATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124462 : ACAGGAAGTATGTAACCTTTACAATGATAGGATATAGT--------AGGATAGACAATTAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCCA-----TCAA--------AGAACTAAAAAGAAAGAAACATTTACACCAATTGCACAAAGAACAAACGACAAATTGCAAAC-TTAGT-GTT---ATGGCG----GTGATACCCTTCCATA
gi|124463 : ACAGGAAGTATGTAACTTTTACAATGACAGGATATAGA--------AGAATAGACAAATAGC---AAAGTTACAAAGGTGAAATATTC-----CATTTCCC-----ACAA--------
gi|124464 : ACAGGAAGTATGTAACTTTTACAATGATAGGATATAGT--------AG-ATAGACAAATAGC---AACGTTACAAAGGTGAAATATTC-----CATTTCCC-----ACAA--------AGAACTAAGAACAAAGAAACATTTACACCTATTACACAAAGAACAAACGCCAAATTACGAAC-TTAGA-TTT---ATGGCG----GTGATACCCTTCCATA
gi|124465 : GTATGTAACTTTTACAATCATAGGATATAGA--------AGGATAAACAAATAGC---AAAGTTACAAAGGTGAAACATTT-----CAATTCCT-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACATCCATTGCACAAAGAACAAACGAAAAATTACAAAC-TTAGA-GTA---ATGGCG----GTGATACCCTTCCATA
gi|124466 : GTAACTTTTACAATGATAGGACATAGT--------AGGATAGACAAATAGT---TAAGTTACAAAGGTGAAATAATA-----CATTTCCC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCAGTGCACAAAGAACAAAC-ACACGT----------AGA-ATT---ATGGCG----GTGATACCCTTCCATA
gi|124467 : TATAGT--------AGGATAGACACATAGC---AAAGTTACAAAGGTGAAATATTT-----CATTTCC------ACAA--------AGAACTTAGAAGAAAGAAACAATTACACCCATTGCACAAAAAACAAACGACAAATTGCAAAC-TTAGA-GTT---ATGGCG----GTGATACCTTTCCATA
gi|124468 : T--------AGACTAGACAAATAGC---AAAGTTACAAAGGTAAAATGTTT-----CATTTCTC-----ACAA--------AGAACTAAGAAGAAAGAAACATTTACACCAATTACACAAACAACAAACAACAAATTTCAGAC-TAAGA-GTT---ATGGTG----GTGATACCCTTCCATA
gi|124469 : TGAACTATTT-----CATTTCCTTTCCTACAA--------AGAACTAAGAAGAAAGAAACATTTACACCCATTGCACAAATAACAAAAGACAAATTGCAAAC-TGAGA-GTT---ATGGCG----GTGATACCCTTCCATA