lowQualScore : 2222222 111111111 1111111 11 3333333 1 1111111111 2222222222 11111111 4444444444444444444444444 1111 11 1 1 1 1 1 22222222222222222222222222 1 22222
lowQualScore : 1 66 0000000 11 55 222222222 1 9999999 222 11 44 11 1 2222 77 8888888 3 222 222 55555 9999 1 22 222 22 0 1 7777777777 1 1 99 2222222222 2 2 11111111 3333333333333333333333333 4 999 4 6666 8888888 777777 2 2 11 4 0 5 5 2 8 1 1 2 2 5 66666 444 5 1 9 99999999999999999999999999 33 44 9 5 11111 2 5
lowQualScore : . .. ....... .. .. ......... . ....... ... .. .. .. . .... .. ....... . ... ... ..... .... . .. ... .. . . .......... . . .. .......... . . ........ ......................... . ... . .... ....... ...... . . .. . . . . . . . . . . . ..... ... . . . .......................... .. .. . . ..... . .
lowQualScore : 5 11 9999999 55 00 222222222 2 7777777 111 77 22 88 3 7777 99 9999999 2 888 888 66666 0000 6 22 999 55 3 8 7777777777 7 7 00 9999999999 2 2 99999999 7777777777777777777777777 2 888 7 3333 7777777 777777 5 5 88 5 4 0 3 7 9 9 5 7 7 0 77777 777 1 3 9 66666666666666666666666666 99 33 8 0 11111 9 7
consensus : ATTTTGAAATCCTCAT-TN-ATTTGGGGGTCAACC-CAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTT----TNACTG-T-NT-C-T---C---TC-----T--A-TCT-TTCTT--A---TG--TCT-AATA----AN----A-TA-ACTTTC-TTTTCTTGTGTTTGAATAAACCGGT---------TTGA-GT-CCA-------TATTTAATAT--G--GATGT---CATATTT-GA--TAACTG--NTTT-TT---CAAACACT-------ATTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTG-CTAAAACTTTCNTTCTTCATCCTAAAGC-TTTT-TATTCTGTACATTCCCGTATTAG-TC-TGTTTCTCT-----AAATTTACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTATATACTTGC--------------------------TCC--GATACA-AAACCGTCCATAT---T-TCTTA-CCTTTCGCTTGTTTTCGGTACAGTAC
Reference ( gi|129654 ) : ATTTTGAAATCCTCAT-TG-ATTTGGGGGTCAACC-CAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTT----TTACTG-A-AT-C-T---C---TC-----T--G-TCT-TTCTT--A---TG--TAT-AATA----AC----A-TA-ACTTTC-TTTTCTTGTGTTTGAATAAACCGGT---------GTGA-GT-CCA-------CATTTAATAT--G--TATGG---CACATTT-GT--TAACCG--GTTT-TT---AAAACACT-------ATTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTG-CTAAAATCTTCGTTCTTTATTCTAAAGC-TTTT-TATTCTGTATATTCCCTTATTTG-TC-TGTTTGTCT-----AAATTTACTATCTTTC---ATTCTGGAGTGTGCTAACTCATGTTCTTTATACTTTC--------------------------TCC--GATACA-AAACTGTCCCTAT---G-TCTTA-CTTTTCGCTTGTTTTCGGTACAGTAC
gi|129658 : ATTTTGATATCCTCAT-TG-ATATGAGG-TCAACC-CAT-C-CAGTGGAAT-GTGGTTG---T---C---TTACA--ATTGCT-ACAGTCATCAGTCGTGGAGGATTGAGCG--C-CTT----TTACTGTC-CT-C-T---C---TC-----T--T-TCT-CTCTT--A---TG--TCT-AATA----AT----A-TA-ACTTTT-TGTTCTTGTTTTT---CAAACCGGT---------TTGA-GT-CCA-------TATTTAATAT--G--GATAT---TATATTT-GA--TAACTGTTTTTT-TT---CAAACACT-------ATTA------GTACTCCATTCTGGTTTCAG-ATTTGTCTG-CTAAAACTTTCGTTCTACATCCTAAAGC-TTTT-TATTCTGT---TTC-------------------TCT-----AAATTTACTATCTTTC---ATTCTTGAGTTTGCTTACTCATCTTCTATATACTTTC--------------------------TCC--GATACA-AAACCGTCCATAT---T-TCTTA-CCTTTCGGTTGTTTTCGGTACAGTAC
gi|129659 : ATTTTGAAATCCTCAT-TA-ATTTGAGG-TCAACC-AAT-C-CAGTGGTAT-GTGGTTG---T---C---TTACA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-ATT----TAACTG-T-TTTC-T---T---TC-----T--G-TCT-TTCTT--A---TG--CCT-AATA----CA----A-TA-ACTTTC-TTTTCTTGTGTTGGAATAAACCGGT---------TTAA-GT-CCA-------TATTTAATAT--A--GATGT---CATATTT--TAATAACTG--GTTT-TA---CAAACACT-------ATTA------GTACTCCGTTTTGATTTCAG-ATTGGTCTGTTTAAAAT-TTCCTTCTTCATCCTAAAGC-TTTT-TATTCTGTACATTCCCGAGTCTGTTT-TATTTCTCT-----AAGTTTACTGTATTTC---AGTCTGGA-CGTGCAAAATCATGTTCTATATACTTGC--------------------------GTT--GATACA-TAACCGTTTATAT---T-TCTTA-CCTTTCGCTTGTTTTCGGTACAGT
gi|129660 : ATTTTGAAATCCTCAA-TG-ATTTGAGG-TCAACC-TAT-C-CAGTGGAAT-GTGGTTG---T---C---TTATA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTT----TTGCTG-T-CTTC-T---C---TC-----T--A-TCT-TTCTT--C---TG--TCT-AATA----AT----A-TA-ACTTTC-TTTTCTTGTGTTTGAATAAACCGGT---------TTGA-GT-CCT-------TATTTAATAT--G--GATAA---CAAATTT-GA--TAACTG--GTTT-TT---AAA-CACT-------ATTG------GTACTCCGTTCTGCTTTCAG-ATTTGTCTT-CTAAAACTTTCGTTCTTCACCCTTAAGC-TAAT-TATTCCGTACTTTCCCGTAATAG-TC-GGTTTCTCT-----AAATTTACTATATTTC---AATCTGGAGTGTGCTTACTTGTGTTTTATATACTTTCTGAATAAACTATGTCTATGCTATGTCTCA--GATACA-AAAC-GTCCATAT---T-TCTTA-ACTTGTGCTTG-TTTCTGTACAGTA
gi|129657 : ATTTTGAAATCCTCAT-CA-ATTTGAGG-TCAACC-CAT-C-CAGCTGGAT-GTGGTTG---T---C---TTACA--ATTGTT-ACAATCACCGGACGTGGAGGATTCAGCA--C-CTT----TAACTG-T-CTTC-T---C---TC-----C--A-TCT-TTCTT--A---TG--TCT-AATA----AG----A-TA-ACTTTC-TTTTCTTGTGTTTGAATAAACCGGT----------TAATGT-CCA-------TTTTTAATAT--G--CATGT---CATATTTTGA--TAACTG--GTTT-TT---CAAACACT-------ATTACTTTTAGTACTCCGTTCTGATTTTAG-ATATGTCTG-CTAAAACTTTCTTAATTCATCCTAACAC-TTTT-TATTCTGTGCATTCCCATATAAG-TC-TGTTTCTCC-----AAGTTTACTATCTTTC---AGTCTTGAGTTTGCTTACTTATGTTCTATATACTCGC--------------------------TTCTATATACA-CAACCGTACATAT---T-TCTTA-CCTTTCGCTTGTTTTCGGTACAGTAC
gi|129656 : ATTTTGAAATTCTCGA-TA-ATTTGAGG-TCAACC-CAT-C-CAGCGGGAT-GTGGTTG---T---C---TTACA--AATGCT-ATAATCACCGGTCGTGGAGGATTGAGCA--T-CTT----TAACTG-G-CTTC-T---C---TC-----T--A-TCG-TTCTT--A---TG--TCT-CACT----AG----A-TATACTTTC-TTTTCTTGTGTTTGAATAAACCGGG---------TTGA-GT-CCA-------TATTTAATAT--G--GATGT---CATATTTTGA--TGACTG--TTAT-AT---CAAACACT-------ATTA------GTACTCCGTTCTGATTTTGG-ATTTGTCTG-CTAAAAATTTCTGTATTTATCCTGAAGC-TTTT-TATTCTGTACATTCCCGTATTAG-TA-TGTTTCTCT-----ATGTCTACAATCTCTC---CATCTTGAGTGTGCTTACTCATGTTCTATATACTTGC--------------------------TCC--GATACA-CAATCGTCCATAT---T-TCTTA-CCTTTCGCTTATTTTCGGTACA
gi|129661 : ATTTTAAAATCCTCAT-TG-ATT-AGAGGTCAACC-CAT-C-CAGTGGGAT-GTGGTTG---T---C---TTATA--ATTGCT-ACAATCACCAGTCGTGGAGGATTGAGCG----CTT----TTACTGTC-TT-C-T---C---TC-----T--A-TCT-TTCTT--A---TG--TCT-AATA----AT----A-TA-ACTTTC-TGTTCTTGCGTTTAAATAAACCGGT---------TTGA-GT-CCA-------TATTTAATAT--G--GATAT---CAGTTTT-GA--TAACTG--GTTT-TT---CAAACACT-------ATTA------GTAATCCGTTCTTGTTTCAT-ATTTGTCAG-CTCAAATTTTCCTTCTTCATCCTTAAGC-TTTT-TATTCAGTACATTCCCGTATTTG-TCTTGTTTCTCT-----AAATTTTCTATCTTTC---ATTCTGGAGTGT
gi|129662 : ATTTTTAAATCCTCAT-TA-ATTTGAGA-TCAACC-CAT-C-CAGTGGGGT-GTGATTG---T---C---TTACA--AATGCT-GCAATCACCGGTCATGGATGATTGAACG--C-CTT----TAACTG----T-C-T---CCTTTC-----T--A-TCT-TTCTT--A---TG--TCT-AATA----AG----A-TA-ACTCTC-TTTGCTTGTGTTTAAATTAACTGGT---------TTGA-GT-CCA-------TTATCAATAT--A--TA-------ACA--------------------------------CT-------ATTA------ATACTTTGTTCTGATTTCAG-ATTTGTCTG-CTAAAACTTTCTATTTTCATCCTAAAGC-TTTT-TATTCGGTACATTTCCTTATTAG-TC-TGTTTCTCTAAAAAAAA---ATTATATTTCAGGATTT---AGTGTGCTTACTTATGTGCTATAAACTTGC--------------------------TCC--TATACA-CAACCGTCCATAT---T-TCCTA-CATTTCGCTTGTTTTCGGTACAGTtgttgcccacgctat
gi|129663 : ATTTTGAAATCCTCAT-TA-ATTTGAGG-TCAACC-TAT-C-AAGTGAGAT-GTGGTTG---T---C---ACACA--ATTGCT-ACAATCGCCGGTCGTGGAGGATTGAGCA--C-CTT----TAACTG----T-CTT---C---TC-----TAGA-TCT-TTCTT--A---TGGATGT-CATATTTTA-----A-TA-ATTGTT-TTTTC
gi|129655 : ATTTTAAAATCCTCAT-TG-ATTTGAGG-TCAACC-CAT-C-CAGTGGGAT-GTGGTCG---T---C---Taatcactattaatacttcgatctgattttagatttgtctgctaaatgtttctttctttatccttaagctttttattttgtacattcccgtttttgtctgcgtcactaagtttactatctatcagtcttgagtgtgcttattgatgttctatatatttgcttcgctacacaaacgtccatatttcctttctttcgcttgttttcggtattgtac
gi|129664 : TTTTTAAATCCTCAT-AA-AATTGAGG-TCAACC-CA------------------------T---C---TTACA--ATCGC----------CGGTCGTGGAGGATTGAGCA--C-CTT----AAACTG-T-TTTC-T---C---TC-----T--A-TCT-TTCTT--A---TG--TCT-AATA----AG----A-TA-ACTTTC-TTTTCTTGTGTTTGAATAAACCGGT---------TTGA-GT-CCA-------TATTTAATGT--G--GAACT---CATACTT-TTA-TAACTGT-TTTT-TT---CAAACACT-------ATTA------CTACTCCGTTCTGATTTTAT-ATTTGTCTG-CTTAACTATTCTTTATTCATTCTAACGC-TTTT-T-TTCTGTA-------TTA---G-TC-TGTCTCTCT-----AAGTTT-CTATCAGTC----TTC---AGTAGGCTTACTCATGTTCTGTGTACTTGC--------------------------TCC--TATACA-CAATCGTCAATGT---T-TCTTACCTTTTCCATTGTTTTAGGTACAGTGC
gi|129665 : TTTTGCAATCCTCCT-TC-AT---GAGGTCAACC-CAC-C-CA---------TGGTTG---TACTC---TTACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--T-CTA----TC-CT--C-AT-T-T---C---TT-----A--GATAT-TTCTT--A---T
gi|129666 : TTTGAAATCCTCAT-TG-ATTTGAAT-TCAACC-TAT-C-CGGTGGGAT-GTGGTTG---T---C---TTACA--ATTGCT-ACAATCACCGGTCGTGGAGGGTTGAACG--C-GTT----TCACTT----T-C-T---T---T------T--C-TCT-TTCTT--A---TG--TCT-AACA----AC----A-TA-ACATTC-TTTTCTTATGTTTGAATAAACCGGT---------TTGA-GT-CCA-------TATTTAATAT--G--GATAT---CATATTT-AA--TAACCA--TTTT-TTTTTCAAATACT-------ATTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCAG-CTAAAACTTTCGTTTTTTATCCTAAAGC-TTTTTTATTCTGTACATTCCCGTATTAG-TC-TGTTTCTCT-----GAATTTACTTTCTTTC---ATTTTGGTGTGTGCTTACTCATGTTCTTTATACTTGC--------------------------ACC--GATACA-AAACCGTCCATAT---T-TCTTA-CCTTTCGCTTGTTTTCGGTACAGTAC
gi|129667 : TTTGAAATCCTCAT-TG-ATTTGAGG-TCAACC-CAT-C-CAGTGGGGT-GTGGTTG---T---C---TTAAA--ATTACT-ACAATTAGCGGTCGTAGATGATTGAGTG--C-CTT----TAACTG-T-CTTC-T---C---TC-----T--A-TCT-TTCTA--A---TG--TCT-AATA----AT----A-TA-ACATTT-TGTTCTTGTGTTTGAACATACCGGT---------TTGA-GT-ACATATCATGCATTTGATAT--GGTTAT-----TATATTT-GA--TAACAG--ATGT-TT---CAAACACT-------ATCA------TTATTCCGTTTTGGTTTTAG-ATTTTTCAG-CTAAAATTTTCATTCTTCATCCTAAAGT-TTTT-TATTCTATACATTCCCGTTTTAG-TC-TGTTTCTCT-----AAAT----TATCTTTC---GTTCTGTAGTGCGCTTACTCGTGTTCTTTATACTTTC--------------------------TCT--GATTCA-AAACCGTCCATAT---T-TCTTG-CCTTTGGCTTGTTTTCGGTACAGTAC
gi|129669 : TTTGAAATTCTCAC-TA-A----------------AT-C-TAGTGGAAT-GTTGTTG---T---T---TTACA--ATTGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTT----TTACTG-T-CT-C-T---C---TC-----T--A-TCT-TTCAT--A---TG--TCT-AATA----CA----A-TA-ACCTCA-TGTTCTTGTG
gi|129670 : TTTGAAATCCTCAT-TA-ACGT-CAGGTCAGCA-CAT-CTCAGTTTGAT-GTGGCTG---T---CTGGTTA-A--A--GCT-TAAACCACCGGTGGTGGAGGATTAAGCA--C-CTT----TCTCTT-ACAT-C-T---T---GC-----T--A-TCT-TTCCT--A---
gi|129671 : TTAGAAATCCCCGC-TC-AT---GGGGTCAACC-TA----AAG-----C-ATGGTTGCATT---C---TTACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTT----T
gi|129668 : TTTGAAATTCTCAC-TA-ACGTGAGG-TCAGCC-CAT-CTCAATTTGAT-GTGGTTT---A---C---TGACT--TTAGCTTAAAAGCACCGGTCGTGGAGGATTAAGCA--C-CTTTCTCTTACT-----T-C-T---T---GC-----T--A-TTT-TTCCT--cctattttct
gi|129672 : TTTGAAATCCTCGT-AC-A---GGAGGTCAACC-TA----AAGCA------TGGCTGCATT---C---TTACA--ATTGCT--TAATCACCGGTAGTGGAGGATTAAGCG--C-CTT----TC-CT--A-TT-T-T---C---TTA----C--A-TTT-TTCTA--A---AC--TAT-TACT----ACTG--T-TG-ACTTTTATTTTCTT
gi|129673 : TTTGAAATCCTCGA-TC-ATT---AGGTCAACC-CAAAC-CA---------TGGTTG---TACTC---TTACA--ATTGCT--TAATCATCGGTAGTGGAGGATTTAGCG--C-GTT----T--CTT-A-TT-A-T---C---TTAAAAAT--G-TCT-TACTT--ACCTTG--TCT-GAT-----------------TTTTA-TTTTCTT
gi|129674 : TTTTAAATCCTCACACGCAT---GAGTTCAATC-CAT-T-C--TAGGAT-GTGATTACAAT---C---TGACA--AATGTT--CAGTCACTGGTCGTGG
gi|129675 : TTGAAATCCTCAT-TG-ATTTGAGG-TGAACC-CAT-C-CAGTGGGAT-GTGGCTG---T---C---TCACAATATTGTT-ATAATCACCGGTCGTGGAGGATTGAGCG----ATT----TTACTC-T-AT-C-T---T---TC-----T------T-TTCTT--G---TG--TTTGAATA-------------A-AC-----------CG-GTTTGA------------------------GT-CCA-------TA-TGGATAT-------------CAAATTC-GA--TAACTG--TTTT-TT---CAAACACTACTGATGATTA------GTATTCCATTATGGTTTCAG-ATTTGTCTG-CTAAAACTTTTATTCTTTATCCTAAAGCTTTTT-TGTTCTGTACATTCTCGTATTAG-TC-TGTTTCTCT-----GAATTTAGTATCTTTT---ATTCCGGAGAGTGCTTACTCGTGTTTTATATACTTGC--------------------------TTC--GATACA-AAACCGTCCGTAT---T-TCGTA-CCTTTCGCTTGTTTTTGGAACAGTGCtaaattatacactcgctaact
gi|129676 : AAATCCCCAT-CC-AT---GGGGTCAACC-AAA-C---------T-ACGGTTGTATT---C---TTACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTT----T
gi|129677 : AAATCCCCAT-CC-AT---GGGGTCAACC--A-----AAT----T-ACGGTTG---TATTC---TTACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTT----Tcctatattct
gi|129678 : AAATCCCCAT-CC-AT---GGGGTCAACC-AAA-C---------T-ACGGTTGTATT---C---TTACA--ATTGCT--TAATCGCCGGTCGTGGAGGATTAAGCG--C-CTT----T
gi|129681 : AAATCCCCAT-CC-AT---GGGGTCAACC-AAA-C---------T-ACGGTTGTATT---C---TTACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCA--C-CTT----Tcccatattcttacatattctcatatacttttgcacttacttttcttttc
gi|129679 : AAATCCCCAT-CC-AT---GGGGTCAACC-AAA-T-CA---------CGGTTGTATT---C---TTACA--ATTGCT--TAATCACCGGGCGTGGAGGATTAAGCG--C-CTT----TC-CTA-T-AT-T-T---T---CA-----T--A-TAC-TTC--------TG--TAC-----------------TG-ACTTTTATTTTCTTcctatattcttacatattttcatatacttctacactaacttttaatttcttcaaatttcttagctaacaatacttgttttatctttccatccttaatgttttcttcatcttgttttcctttataactttactttatttttgttttcctatcttaccttacctcattcttacttttctttcttttcatactatatttttcttatcctttccatccttacttaattcttgttttctttttcgctcttatttcaatct
gi|129680 : AAATCCACAT-CC-GTT---GGGTCGACC-AAA-C-TA---------CGGTTG---TATTC---TTACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTT----TC-CT----AT-A-T---T---TT-----T--A-CATATTCTC--A---TA--TAC-TTCT----GC----ACTG-ACTTTTATTTTCTT
gi|129683 : GAGGTCAACC-CAC-C-CA---------CGGTTG---TATTC---TTACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTT----TTCCT----AT-T-T-------------------TCT-TACAT--A---CT--TAT-ACTACT--GCTGCTG-TG-ACTTTTATTTTCTT
gi|129682 : tGGTTAACC-CAT-C-TTGTGGGAT-GTGGTTG---C---C---ATTCA--ATTGCT-ACAATTGCCGGTCGTGGATGATTGAGAGTCC-CTT----TCACTG-T-TT-TAT---C---TC-----T--G-TAT-TTCTT--C---TG--TCT-CGTA----AA----G-TA-ACATCT-TTTTCTTGTGTTTGAAGAAACCGGT---------TTGA-GT-CCA-------TATTT------------TGG---------------TAACTG--GTTA-TT---CTAACACT-------G-----------AC------CTCATTTCAGTATTT-TCTG-AT-AAATTTTCTTTCTTTAT
gi|129657 : ttaaattaaCAACCACAT-C-CAGCTGGAT-G-GGTTG---A---C---CTCAA--ATTG
gi|129685 : attttgaaatcctcat-C-TAGTGGAAT-GTTGTTG---T---T---TTACA--ATTGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTT----TTACTG----T-C-T---C---TC-----T--G-TCT-TTCAT--A---TG--TCT-AATA----AA----G-TA-ACCTCA-TTATCTTGTGTTTGAACAAACACGC---------GTGA-GT-CCA-------TATTTAtcttacaattgttacaatcaccggacgtggaggattcagcacctttaactgtcttctctccatctttcttatgtctaataagataactttcttttcttgtgtttgaataaaccggttaatgtccatttttaatatgcatgtcatattttgataactggtttttcaaacactattacttttagtactccgttctgattttagatatgtctgctaaaactttcttaattcatcctaacactttttattctgtgcattcccatataagtctgtttctccaagtttactatctttcagtcttgagtttgcttacttatgttctatatactcgcttctatatacacaaccgtacatatttcttacctttcgcttgttttcggtacagtac
gi|129686 : GTGGGAT-GTGGTTG---T---C---TTACA--GTTGCT-ACAATCACC-----------ACTGGGCG--C-CTT----TAACTG----T-C-TTTTC---TC-----T--A-TCT-TTCTT--A---TG--TCA-AATA----AC----A-TA-ACTTT-----TCTTGTGTTTGAATAAACCGGT---------TTGA-GT-CCA-------TATTTGATAT--G--GATAT---CATATTT-GA--TAACTG--TTTT-TT---AAAACACT-------ATTA------GTACTCCGTTCTGGTTTTTG-ATTTGTCAG-CTAAAACTTTCGTTCTTTACCCTAAAAC-TTTT-TATTCTGTACATTCCAGTATTAG-TC-T-TTTCTCT-----AAATTTGCTATCTTTT---ATTCTGGAGTGTGCTTACTCACGTTTTATGTACTTGC--------------------------TCC--GCTAC--AAACCGTCCATAT---T-TCTTA-TCTTTCGTTTGTTTTCGGTACAGTACctgtagagttca
gi|129684 : GGATCATGGTTGCATT---C---TTACA--ATTGCT--TAATCACCGGTTGTGGAGGATTAAGCG--C-CTT----T
gi|129687 : catcgcacaTG---T---T---TTACA--ATTGCT-ACTTTCACCGGTCGTGGAGGATTTAGCG--CATTT----TTACTG-T-CTTC-T---C---TC-----T--A-TCT-TCTTTTGA---TG--TCT-AATA----AC----A-TA-ACTTTC-TTTTCTTGTATTTGAATAAATCGTT---------TTGA-GT-CCA-------TATTTATTAT--G--GATAT---CATATTC-GA--TAACTG--TTTT-TT---CCAACACT-------ATAA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTG-CTAAAACTTTCGTTCTTCATCCTAAAGCTTTTT-TATTACGTACAATCCCGTATAAG-TC-TGTTTCTCT-----AAATTTACTCTCTTTC---ATTCTGGGGTGTGCTTACTCATGTTCTATATACTTGC--------------------------ACC--GATACA-AAACCGTCCATATTTCGTTCCTA-TCTTTCGCTTGTTTTCGGTACAGTACcccattttcctacatatttatta
gi|129688 : TA----AC----A-TA-ACTTTC-TTTTCATGTGTTTGAATAAACCGGT---------TTGA-GT-CCG-------TA--TAACGT-----TCTGGTTTCAGATTT-G
gi|129675 : GTGTTTGAAAAAACAGTT---------AT-------CG-------AATTTGATATCCA--TATGGA--CTCA---------AACCG--GTTTATT---CAAACACactgaaaaacgttcgttcttcatcttaaagctttttattctgtacattcccgtattagtctgtttctctttatttaatatctttcattctggaatgtgctttctcatgttctttttacttgctccgatatttccatatttctgacctttcgcttgttttcggtgc
gi|129664 : ttgaaatcctcattgatttgaggtgaacccatccagtgggatgtggctgtctcacaatattgttataatcaccggtcgtggaggattgagcgattttactctatctttcttttcttGTGTTTGAAAAAAACAGTTATAAAAGTATGA-GTTCCA-------CATTAAATAT--G-----GA---CTCA---------AACCG--GTTTATT---CAAACACtactgatgattagtattccattatggtttcagatttgtctgctaaaacttttattctttatcctaaagcttttttgttctgtacattctcgtattagtctgtttctctgaatttagtatcttttattccggagagtgcttactcgtgttttatatacttgcttcgatacaaaaccgtccgtatttcgtacctttcgcttgtttttggaacagtgc
gi|129663 : tttttaaatcctcataaaattgaggtcaacccatcttacaatcgccggtcgtggaggattgagcaccttaaactgttttctctctatctttcttatgtctaataagataactttcttttcttTAT--G--GATGT---CATATTT--TAATAATTG--TTTT-TT---CAATCACT-------ATTA------ATACTTCGATCTGATTTTAG-ATTTGTCTG-CTAAATGTTTCTTTCTTTATCCTTAAGC-TTTT-TATTTTGTACATTCCCGTTTTTG-TC-TGCGTCACT-----AAGTTTACTATCTATC---AGTCTTGAGTGTGCTTATTGATGTTCTATATATTTGC--------------------------TTC--GCTACACAAAC-GTCCATAT---T-TCCTT-TCTTTCGCTTGTTTTCGGTATTGTACtattactactccgttctgattttatatttgtctgcttaactattctttattcattctaacgctttttttctgtattagtctgtctctctaagtttctatcagtcttcagtaggcttactcatgttctgtgtacttgctcctatacacaatcgtcaatgtttcttaccttttccattgttttaggtacagtgc
gi|129688 : attttgaaatcctcattaatttgaggtcaacctatcaagtgagatgtggttgtcacacaattgctacaatcgccggtcgtggaggattgagcacctttaactgtcttctctagatctttctCGTTCTGGTTTCAG-ATTTGACTG-A-AAAACGTTCGTTCTTCATCTTAAAGC-TTTT-TATTCTGTACATTCCCGTATTAG-TC-TGTTTCTCT-----TTATTTAATATCTTTC---ATTCTGGAATGTGCTTTCTCATGTTCTTTTTACTTGC--------------------------TCC--GATA-------TTTCCATAT---T-TCTGA-CCTTTCGCTTGTTTTCGGTGC
Alignments
lowQualScore : 1111111 111111111 1111111 11 11 111 222222222222222222222222
lowQualScore : 1 6666666 0 55 000000000 1 9999999 222 11 33 11 1 22 2 1 444 555 1 55555 11 2222 22 222 44 44 0 666666 1 6666666 77 22 7777777 333 4 2 9 444 44 33 8888888 777777 2 2 1 2 2 2 2 66666 44444 444 444444444444444444444444 2 2 33 2 5555 2
lowQualScore : . ....... . .. ......... . ....... ... .. .. .. . .. . . ... ... . ..... .. .... .. ... .. .. . ...... . ....... .. .. ....... ... . . . ... .. .. ....... ...... . . . . . . . ..... ..... ... ........................ . . .. . .... .
lowQualScore : 0 9999999 2 00 999999999 2 0000000 111 77 55 77 2 00 6 3 555 222 3 99999 99 9999 00 666 66 00 4 222222 6 8888888 33 22 6666666 999 9 4 4 111 22 44 1111111 222222 4 4 0 5 5 5 5 22222 77777 444 111111111111111111111111 7 7 77 3 7777 7
consensus : ATTTTGAAATCCTCATTNATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTCAC-TG-T-C-T-C-T-CTC-----T--ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-------ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCATA-TTT-GATAAC---TG-NTTT--TTCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
Reference ( family-595 ) : ATTTTGAAATCCTCATTNATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTNAC-TG-T-N-T-C-T-CTC-----T--ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-------ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATGTCATA-TTT-GATAAC---TG-NTTT--TTCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129654 : ATTTTGAAATCCTCATTGATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTTAC-TG-A-A-T-C-T-CTC-----T--GTCTTTCT----T--A---TG--T--ATAATA---ACA-TA-------ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTGTGAGTCCACAT-------TTAA---TATGTATGGCACA-TTT-GTTAAC---CG-GTTT--TTAAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAATC-TTCGTTCTTTATTCTAAAGC-TTTT-T-ATTCTGTATATTCCCTTATTTGTC-TG-----TTTGTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTAACTCATGTTCTTT------------------------ATACT-TT-CTCC--GATACAAAACTGTCCCTAT----GTCTTACTTTTCGC-TTGTTTTCGGTACAGTAC
gi|129655 : ATTTTAAAATCCTCATTGATTTGAGG-TCAACCCAT-C-CAGTGGGAT-GTGGTCG---T---C---T
gi|129656 : ATTTTGAAATTCTCGATAATTTGAGG-TCAACCCAT-C-CAGCGGGAT-GTGGTTG---T---C---TTACAAA--TGCT-ATAATCACCGGTCGTGGAGGATTGAGCA--T-CTTTAAC-TGGC-T-T-C-T-CTC-----T--ATCGTTCT----T--A---TG--T--CTCACT---AGA-TAT------ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGGTTGAGTCCATAT-------TTAA---TATGGATGTCATA-TTTTGATGAC---TG-TTAT--ATCAAACACTA-------TTA------GTACTCCGTTCTGATTTTGG-ATTTGTCTGCTAAAAAT-TTCTGTATTTATCCTGAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTA-TG-----TTTCTCTATGTCT-----ACAATCTCTC---CATCTTGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACACAATCGTCCATAT----TTCTTACCTTTCGC-TTATTTTCGGTACA
gi|129657 : ATTTTGAAATCCTCATCAATTTGAGG-TCAACCCAT-C-CAGCTGGAT-GTGGTTG---T---C---TTACAAT--TGTT-ACAATCACCGGACGTGGAGGATTCAGCA--C-CTTTAAC-TG-T-C-TTC-T-CTC-----C--ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-------ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTAATGTCCATTT-------TTAA---TATGCATGTCATA-TTTTGATAAC---TG-GTTT--TTCAAACACTA-------TTACTTTTAGTACTCCGTTCTGATTTTAG-ATATGTCTGCTAAAACT-TTCTTAATTCATCCTAACAC-TTTT-T-ATTCTGTGCATTCCCATATAAGTC-TG-----TTTCTCCAAGTTT-----ACTATCTTTC---AGTCTTGAGTTTGCTTACTTATGTTCTAT------------------------ATACT-CG-CTTCTATATACACAACCGTACATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129658 : ATTTTGATATCCTCATTGATATGAGG-TCAACCCAT-C-CAGTGGAAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAGTCATCAGTCGTGGAGGATTGAGCG--C-CTTTTAC-TG-T-CCT-C-T-CTC-----T--TTCTCTCT----T--A---TG--T--CTAATA---ATA-TA-------ACTTTT-T--GTTCTTGTTTTT---CAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATTATA-TTT-GATAAC---TG-TTTTTTTTCAAACACTA-------TTA------GTACTCCATTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTACATCCTAAAGC-TTTT-T-AT--------------------TC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTTGAGTTTGCTTACTCATCTTCTAT------------------------ATACT-TT-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGG-TTGTTTTCGGTACAGTAC
gi|129659 : ATTTTGAAATCCTCATTAATTTGAGG-TCAACCAAT-C-CAGTGGTAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-ATTTAAC-TG-T-T-TTC-T-TTC-----T--GTCTTTCT----T--A---TG--C--CTAATA---CAA-TA-------ACTTTC-T--TTTCTTGTGTTGGAATAAACCGGTTTAAGTCCATAT-------TTAA---TATAGATGTCATA-TTTTAATAAC---TG-GTTT--TACAAACACTA-------TTA------GTACTCCGTTTTGATTTCAG-ATTGGTCTGTTTAAAAT-TTCCTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCG----AGTC-TGTTTTATTTCTCTAAGTTT-----ACTGTATTTC---AGTCTGGA-CGTGCAAAATCATGTTCTAT------------------------ATACT-TG-CGTT--GATACATAACCGTTTATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGT
gi|129660 : ATTTTGAAATCCTCAATGATTTGAGG-TCAACCTAT-C-CAGTGGAAT-GTGGTTG---T---C---TTATAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTTGC-TG-T-C-TTC-T-CTC-----T--ATCTTTCT----T--C---TG--T--CTAATA---ATA-TA-------ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCTTAT-------TTAA---TATGGATAACAAA-TTT-GATAAC---TG-GTTT--TT-AAACACTA-------TTG------GTACTCCGTTCTGCTTTCAG-ATTTGTCTTCTAAAACT-TTCGTTCTTCACCCTTAAGC-TAAT-T-ATTCCGTACTTTCCCGTAATAGTC-GG-----TTTCTCTAAATTT-----ACTATATTTC---AATCTGGAGTGTGCTTACTTGTGTTTTATATACTTTCTGAATAAACTATGTCTATGCTATGTCTCA--GATACAAAAC-GTCCATAT----TTCTTAACTTGTGC-TTG-TTTCTGTACAGTA
gi|129661 : ATTTTAAAATCCTCATTGATT-AGAGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTATAAT--TGCT-ACAATCACCAGTCGTGGAGGATTGAGCG----CTTTTAC-TG-TCT-T-C-T-CTC-----T--ATCTTTCT----T--A---TG--T--CTAATA---ATA-TA-------ACTTTC-T--GTTCTTGCGTTTAAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCAGT-TTT-GATAAC---TG-GTTT--TTCAAACACTA-------TTA------GTAATCCGTTCTTGTTTCAT-ATTTGTCAGCTCAAATT-TTCCTTCTTCATCCTTAAGC-TTTT-T-ATTCAGTACATTCCCGTATTTGTCTTG-----TTTCTCTAAATTT-----TCTATCTTTC---ATTCTGGAGTGTTGTTGCCCACG--CTAT------------------------
gi|129662 : ATTTTTAAATCCTCATTAATTTGAGA-TCAACCCAT-C-CAGTGGGGT-GTGATTG---T---C---TTACAAA--TGCT-GCAATCACCGGTCATGGATGATTGAACG--C-CTTTAAC-TG-T-C-T-CCT-TTC-----T--ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-------ACTCTC-T--TTGCTTGTGTTTAAATTAACTGGTTTGAGTCCAT----------------TATCAAT---ATA-T-------------------------AACACTA-------TTA------ATACTTTGTTCTGATTTCAG-ATTTGTCTGCTAAAACT-TTCTATTTTCATCCTAAAGC-TTTT-T-ATTCGGTACATTTCCTTATTAGTC-TG-----TTTCTCTAAA---AAAAAATTATATTTCAGGATTT---AGTGTGCTTACTTATGTGCTAT------------------------AAACT-TG-CTCC--TATACACAACCGTCCATAT----TTCCTACATTTCGC-TTGTTTTCGGTACAGT
gi|129663 : ATTTTGAAATCCTCATTAATTTGAGG-TCAACCTAT-C-AAGTGAGAT-GTGGTTG---T---C---ACACAAT--TGCT-ACAATCGCCGGTCGTGGAGGATTGAGCA--C-CTTTAAC-TG-T-C-T---T-CTC-----TAGATCTTTCT----T--A---TGGAT--GTCATATTTTAA-TA-------ATTGTT-T--TTTC
gi|129663 : ---TATGGATGTCATA-TTTTAATAAT---TG-TTTT--TTCAATCACTA-------TTA------ATACTTCGATCTGATTTTAG-ATTTGTCTGCTAAATGT-TTCTTTCTTTATCCTTAAGC-TTTT-T-ATTTTGTACATTCCCGTTTTTGTC-TG-----CGTCACTAAGTTT-----ACTATCTATC---AGTCTTGAGTGTGCTTATTGATGTTCTAT------------------------ATATT-TG-CTTC--GCTACACAAACGTCCATAT----TTCCTTTCTTTCGC-TTGTTTTCGGTATTGTACaatcactattaatacttcgatctgattttagatttgtctgctaaatgtttctttctttatccttaagctttttattttgtacattcccgtttttgtctgcgtcactaagtttactatctatcagtcttgagtgtgcttattgatgttctatatatttgcttcgctacacaaacgtccatatttcctttctttcgcttgttttcggtattgtac
gi|129664 : attttgaaatcctcattaatttgaggtcaacctatcaagtgagatgtggttgtcacacaattgctacaatcgccggtcgtggaggattgagcacctttaactgtcttctctagatctttctTTTTTAAATCCTCATAAAATTGAGG-TCAACCCA------------------------T---C---TTACAAT--CGC----------CGGTCGTGGAGGATTGAGCA--C-CTTAAAC-TG-T-T-TTC-T-CTC-----T--ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-------ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TGTGGAACTCATACTTT-TATAAC---TGTTTTT--TTCAAACACTA-------TTA------CTACTCCGTTCTGATTTTAT-ATTTGTCTGCT-TAACTATTCTTTATTCATTCTAACGC-TTTT-T--TTCT----------GTATTAGTC-TG-----TCTCTCTAAGTTT------CTATCAGTC----TTC---AGTAGGCTTACTCATGTTCTGT------------------------GTACT-TG-CTCC--TATACACAATCGTCAATGT----TTCTTACCTTTTCCATTGTTTTAGGTACAGTGC
gi|129665 : TTTTGCAATCCTCCTTCAT---GAGGTCAACCCAC-C-CA---------TGGTTG---TACTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--T-CTATCCT-CA-T-T-T-C-T--TA-----G--ATATTTCT----T--A---T
gi|129666 : TTTGAAATCCTCATTGATTTGAAT-TCAACCTAT-C-CGGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGGTTGAACG--C-GTTTCAC-TT-T-C-T-T-T--TC-----T----CTTTCT----T--A---TG--T--CTAACA---ACA-TA-------ACATTC-T--TTTCTTATGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCATA-TTT-AATAACCATTT-TTTT--TTCAAATACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCAGCTAAAACT-TTCGTTTTTTATCCTAAAGC-TTTTTT-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTGAATTT-----ACTTTCTTTC---ATTTTGGTGTGTGCTTACTCATGTTCTTT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129667 : TTTGAAATCCTCATTGATTTGAGG-TCAACCCAT-C-CAGTGGGGT-GTGGTTG---T---C---TTAAAAT--TACT-ACAATTAGCGGTCGTAGATGATTGAGTG--C-CTTTAAC-TG-T-C-TTC-T-CTC-----T--ATCTTTCT----A--A---TG--T--CTAATA---ATA-TA-------ACATTT-T--GTTCTTGTGTTTGAACATACCGGTTTGAGTACATATCATGCATTTGA---TATGGTTATTATA-TTT-GATAAC---AG-ATGT--TTCAAACACTA-------TCA------TTATTCCGTTTTGGTTTTAG-ATTTTTCAGCTAAAATT-TTCATTCTTCATCCTAAAGT-TTTT-T-ATTCTATACATTCCCGTTTTAGTC-TG-----TTTCTCTAAAT---------TATCTTTC---GTTCTGTAGTGCGCTTACTCGTGTTCTTT------------------------ATACT-TT-CTCT--GATTCAAAACCGTCCATAT----TTCTTGCCTTTGGC-TTGTTTTCGGTACAGTAC
gi|129668 : TTTGAAATTCTCACTAACGTGAGG-TCAGCCCAT-CTCAATTTGAT-GTGGTTT---A---C---TGACTTT--AGCTTAAAAGCACCGGTCGTGGAGGATTAAGCA--C-CTTTCTCTTA-C-T-T-C-T-TGC-----T--ATTTTTCC----T--
gi|129669 : TTTGAAATTCTCACTAA---------------AT-C-TAGTGGAAT-GTTGTTG---T---T---TTACAAT--TGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTTAC-TG-T-C-T-C-T-CTC-----T--ATCTTTCA----T--A---TG--T--CTAATA---CAA-TA-------ACCTCA-T--GTTCTTGTG
gi|129670 : TTTGAAATCCTCATTAACGT-CAGGTCAGCACAT-CTCAGTTTGAT-GTGGCTG---T---CTGGTTA-AA----GCT-TAAACCACCGGTGGTGGAGGATTAAGCA--C-CTTTCTCTTA-C-A-T-C-T-TGC-----T--ATCTTTCC----T--A---
gi|129671 : TTAGAAATCCCCGCTCAT---GGGGTCAACCTA----AAG-----C-ATGGTTGCATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-TA-T-T-T---T-CT
gi|129672 : TTTGAAATCCTCGTACA---GGAGGTCAACCTA----AAGCA------TGGCTGCATT---C---TTACAAT--TGCT--TAATCACCGGTAGTGGAGGATTAAGCG--C-CTTTC-C-TA-T-T-T-T-C-TTA-----C--ATTTTTCTAAACT--A---TT--A--CTACT-----GT-TG-------ACTTTTAT--TTTCTT
gi|129673 : TTTGAAATCCTCGATCATT---AGGTCAACCCAAAC-CA---------TGGTTG---TACTC---TTACAAT--TGCT--TAATCATCGGTAGTGGAGGATTTAGCG--C-GTTT--C-TT-A-T-T-A-T-CTTAAAAAT--GTCTTACT----T--ACCTTG--T--CTGAT------------------TTTTA-T--TTTCTT
gi|129674 : TTTTAAATCCTCACACGCATGAGT-TCAATCCAT-T-C--TAGGAT-GTGATTACAAT---C---TGACAAA--TGTT--CAGTCACTGGTCGTGG
gi|129675 : TTGAAATCCTCATTGATTTGAGG-TGAACCCAT-C-CAGTGGGAT-GTGGCTG---T---C---TCACAATATTGTT-ATAATCACCGGTCGTGGAGGATTGAGCG--A-TTTTA----------------CTC-----T--ATCTTTCT----T----------------------------------------------TTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-----------------GGATATCAAA-TTC-GATAAC---TG-TTTT--TTCAAACACTACTGATGATTA------GTATTCCATTATGGTTTCAG-ATTTGTCTGCTAAAACT-TTTATTCTTTATCCTAAAGC-TTTT-TTGTTCTGTACATTCTCGTATTAGTC-TG-----TTTCTCTGAATTT-----AGTATCTTTT---ATTCCGGAGAGTGCTTACTCGTGTTTTAT------------------------ATACT-TG-CTTC--GATACAAAACCGTCCGTAT----TTCGTACCTTTCGC-TTGTTTTTGGAACAGTGCtaaattatacactcgctaact
gi|129676 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-TA-T-A-T---T-CT
gi|129677 : AAATCCCCATCCAT---GGGGTCAACC-A-----AAT----T-ACGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTT
gi|129678 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCGCCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-CA-T-A-T-----------------TCTTACA----T--A---T---T--CTCAT------A-TACTTTTGCACTTAC-T--TTTCTT
gi|129679 : AAATCCCCATCCAT---GGGGTCAACCAAA-T-CA---------CGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGGCGTGGAGGATTAAGCG--C-CTTTC-C-TA-T-A-T-T-T-TCA-----T--ATACTTCT----ttc
gi|129680 : AAATCCACATCCGTT---GGGTCGACCAAA-C-TA---------CGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-TA-T-A-T-T-T-TTA-----C--ATA-TTCT----C--A---TA--TA-CTTCTG---CAC-TG-------ACTTTTAT--TTTCTTgtactgacttttattttctt
gi|129681 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCA--C-CTTTC-C-TA-T-A-T---T-CTTACA--T--AT-TTTCA----T--A---TACTT--CT-------ACACTA-------ACTTT--TAATTTCTT
gi|129682 : GGTTAACCCAT-C-TTGTGGGAT-GTGGTTG---C---C---ATTCAAT--TGCT-ACAATTGCCGGTCGTGGATGATTGAGAGTCC-CTTTCAC-TG-T-T-T-TAT-CTC-----T--GTATTTCT----T--C---TG--T--CTCGTA---AAG-TA-------ACATCT-T--TTTCTTGTGTTTGAAGAAACCGGTTTGAGTCCATAT----------------------------TTT-GGTAAC---TG-GTTA--TTCTAACACTG------------------AC------CTCATTTCAGTATTT-TCTGAT-AAATT-TTCTTTCTTTATcaaatttcttagctaacaatacttgttttatctttccatccttaatgttttcttcatcttgttttcctttataactttactttatttttgttttcctatcttaccttacctcattcttacttttctttcttttcatactatatttttcttatcctttccatccttacttaattcttgttttctttttcgctcttatttcaatct
gi|129683 : ttaaattaaGAGGTCAACCCAC-C-CA---------CGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTTCC-TA-T-T-T---T-CT------T--A-CATACT----T--A---TA--CTACTGCTG---CTG-TG-------ACTTTTAT--TTTCTT
gi|129684 : tGGATCATGGTTGCATT---C---TTACAAT--TGCT--TAATCACCGGTTGTGGAGGATTAAGCG--C-CTTTC-C-CA-T-T-T-T-C-CTA-----C--ATATTTAT----T--A---
gi|129685 : catcgcaca-C-TAGTGGAAT-GTTGTTG---T---T---TTACAAT--TGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTTAC-TG-----T-C-T-CTC-----T--GTCTTTCA----T--A---TG--T--CTAATA---AAG-TA-------ACCTCA-T--TATCTTGTGTTTGAACAAACACGCGTGAGTCCATAT-------TTAC---TGTAGA
gi|129686 : GTGGGAT-GTGGTTG---T---C---TTACAGT--TGCT-ACAATCACC-----------ACTGGGCG--C-CTTTAAC-TG-T-C-T-T-TTCTC-----T--ATCTTTCT----T--A---TG--T--CAAATA---ACA-TA-------ACTTT-------TCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTGA---TATGGATATCATA-TTT-GATAAC---TG-TTTT--TTAAAACACTA-------TTA------GTACTCCGTTCTGGTTTTTG-ATTTGTCAGCTAAAACT-TTCGTTCTTTACCCTAAAAC-TTTT-T-ATTCTGTACATTCCAGTATTAGTC-T------TTTCTCTAAATTT-----GCTATCTTTT---ATTCTGGAGTGTGCTTACTCACGTTTTAT------------------------GTACT-TG-CTCC--GCTAC-AAACCGTCCATAT----TTCTTATCTTTCGT-TTGTTTTCGGTACAGTACgttca
gi|129687 : TG---T---T---TTACAAT--TGCT-ACTTTCACCGGTCGTGGAGGATTTAGCG--CATTTTTAC-TG-T-C-TTC-T-CTC-----T--ATCTTCTT----TTGA---TG--T--CTAATA---ACA-TA-------ACTTTC-T--TTTCTTGTATTTGAATAAATCGTTTTGAGTCCATAT-------TTAT---TATGGATATCATA-TTC-GATAAC---TG-TTTT--TTCCAACACTA-------TAA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTTCATCCTAAAGCTTTTT-T-ATTACGTACAATCCCGTATAAGTC-TG-----TTTCTCTAAATTT-----ACTCTCTTTC---ATTCTGGGGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATATTTCGTTCCTATCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129688 : TA---ACA-TA-------ACTTTC-T--TTTCATGTGTTTGAATAAACCGGTTTGAGTCCGTA---------TAACGTTCTGG-TTTCAGA-TTT-G---AC---TG-
gi|129688 : CGTTCTGGTTTCAG-ATTTGACTGA-AAAACG-TTCGTTCTTCATCTTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTTTATTT-----AATATCTTTC---ATTCTGGAATGTGCTTTCTCATGTTCTTT------------------------TTACT-TG-CTCC--GATA------TTTCCATAT----TTCTGACCTTTCGC-TTGTTTTCGGTGCaaaaacgttcgttcttcatcttaaagctttttattctgtacattcccgtattagtctgtttctctttatttaatatctttcattctggaatgtgctttctcatgttctttttacttgctccgatatttccatatttctgacctttcgcttgttttcggtgc
Alignments
lowQualScore : 1111111 111111111 1111111 11 1111111 222222222222222222222222
lowQualScore : 1 6666666 0 55 000000000 1 9999999 222 11 33 11 1 88 1 2222222 1 55555 444 3333 22 222 44 44 44444 1 1 88 22 7777777 333 2 2 9 444 44 33 8888888 777777 2 2 1 2 2 2 2 66666 44444 444 444444444444444444444444 2 2 33 2 5555 2
lowQualScore : . ....... . .. ......... . ....... ... .. .. .. . .. . ....... . ..... ... .... .. ... .. .. ..... . . .. .. ....... ... . . . ... .. .. ....... ...... . . . . . . . ..... ..... ... ........................ . . .. . .... .
lowQualScore : 0 9999999 2 00 999999999 2 0000000 111 77 55 77 2 88 4 9999999 4 00000 555 0000 00 777 88 11 22222 7 7 00 33 6666666 999 4 4 4 111 22 44 1111111 222222 4 4 0 5 5 5 5 22222 77777 444 111111111111111111111111 7 7 77 3 7777 7
consensus : ATTTTGAAATCCTCATTNATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTCAC-TGT-C-T-C-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-GATAAC---TG-NTTTT--TCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
Reference ( family-595 ) : ATTTTGAAATCCTCATTNATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTCAC-TGT-C-T-C-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-GATAAC---TG-NTTTT--TCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129654 : ATTTTGAAATCCTCATTGATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTTAC-TGA-A-T-C-T-CTC-----T---GTCTTTCT----T--A---TG--T--ATAATA---ACA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTGTGAGTCCACAT-------TTAA---TATGTATGGCA-CA-TTT-GTTAAC---CG-GTTTT--TAAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAATC-TTCGTTCTTTATTCTAAAGC-TTTT-T-ATTCTGTATATTCCCTTATTTGTC-TG-----TTTGTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTAACTCATGTTCTTT------------------------ATACT-TT-CTCC--GATACAAAACTGTCCCTAT----GTCTTACTTTTCGC-TTGTTTTCGGTACAGTAC
gi|129655 : ATTTTAAAATCCTCATTGATTTGAGG-TCAACCCAT-C-CAGTGGGAT-GTGGTCG---T---C---T
gi|129656 : ATTTTGAAATTCTCGATAATTTGAGG-TCAACCCAT-C-CAGCGGGAT-GTGGTTG---T---C---TTACAAA--TGCT-ATAATCACCGGTCGTGGAGGATTGAGCA--T-CTTTAAC-TGG-C-TTC-T-CTC-----T---ATCGTTCT----T--A---TG--T--CTCACT---AGA-TATACTTTC-T--TTTCTTGTGTTTGAATAAACCGGGTTGAGTCCATAT-------TTAA---TATGGATGTCA-TA-TTTTGATGAC---TG-TTATA--TCAAACACTA-------TTA------GTACTCCGTTCTGATTTTGG-ATTTGTCTGCTAAAAAT-TTCTGTATTTATCCTGAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTA-TG-----TTTCTCTATGTCT-----ACAATCTCTC---CATCTTGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACACAATCGTCCATAT----TTCTTACCTTTCGC-TTATTTTCGGTACA
gi|129657 : ATTTTGAAATCCTCATCAATTTGAGG-TCAACCCAT-C-CAGCTGGAT-GTGGTTG---T---C---TTACAAT--TGTT-ACAATCACCGGACGTGGAGGATTCAGCA--C-CTTTAAC-TGT-C-TTC-T-CTC-----C---ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTAATGTCCATTT-------TTAA---TATGCATGTCA-TA-TTTTGATAAC---TG-GTTTT--TCAAACACTA-------TTACTTTTAGTACTCCGTTCTGATTTTAG-ATATGTCTGCTAAAACT-TTCTTAATTCATCCTAACAC-TTTT-T-ATTCTGTGCATTCCCATATAAGTC-TG-----TTTCTCCAAGTTT-----ACTATCTTTC---AGTCTTGAGTTTGCTTACTTATGTTCTAT------------------------ATACT-CG-CTTCTATATACACAACCGTACATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129658 : ATTTTGATATCCTCATTGATATGAGG-TCAACCCAT-C-CAGTGGAAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAGTCATCAGTCGTGGAGGATTGAGCG--C-CTTTTAC-TGT-CCT-C-T-CTC-----T---TTCTCTCT----T--A---TG--T--CTAATA---ATA-TA-ACTTTT-T--GTTCTTGTTTTT---CAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATTA-TA-TTT-GATAAC---TG-TTTTTTTTCAAACACTA-------TTA------GTACTCCATTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTACATCCTAAAGC-TTTT-T-AT--------------------TC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTTGAGTTTGCTTACTCATCTTCTAT------------------------ATACT-TT-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGG-TTGTTTTCGGTACAGTAC
gi|129659 : ATTTTGAAATCCTCATTAATTTGAGG-TCAACCAAT-C-CAGTGGTAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-ATTTAAC-TGT-T-TTC-T-TTC-----T---GTCTTTCT----T--A---TG--C--CTAATA---CAA-TA-ACTTTC-T--TTTCTTGTGTTGGAATAAACCGGTTTAAGTCCATAT-------TTAA---TATAGATGTCA-TA-TTTTAATAAC---TG-GTTTT--ACAAACACTA-------TTA------GTACTCCGTTTTGATTTCAG-ATTGGTCTGTTTAAAAT-TTCCTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCG----AGTC-TGTTTTATTTCTCTAAGTTT-----ACTGTATTTC---AGTCTGGA-CGTGCAAAATCATGTTCTAT------------------------ATACT-TG-CGTT--GATACATAACCGTTTATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGT
gi|129660 : ATTTTGAAATCCTCAATGATTTGAGG-TCAACCTAT-C-CAGTGGAAT-GTGGTTG---T---C---TTATAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTTGC-TGT-C-TTC-T-CTC-----T---ATCTTTCT----T--C---TG--T--CTAATA---ATA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCTTAT-------TTAA---TATGGATAACA-AA-TTT-GATAAC---TG-GTTTT--T-AAACACTA-------TTG------GTACTCCGTTCTGCTTTCAG-ATTTGTCTTCTAAAACT-TTCGTTCTTCACCCTTAAGC-TAAT-T-ATTCCGTACTTTCCCGTAATAGTC-GG-----TTTCTCTAAATTT-----ACTATATTTC---AATCTGGAGTGTGCTTACTTGTGTTTTATATACTTTCTGAATAAACTATGTCTATGCTATGTCTCA--GATACAAAAC-GTCCATAT----TTCTTAACTTGTGC-TTG-TTTCTGTACAGTA
gi|129661 : ATTTTAAAATCCTCATTGATT-AGAGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTATAAT--TGCT-ACAATCACCAGTCGTGGAGGATTGAGCG----CTTTTAC-TGT-CTT-C-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ATA-TA-ACTTTC-T--GTTCTTGCGTTTAAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-GT-TTT-GATAAC---TG-GTTTT--TCAAACACTA-------TTA------GTAATCCGTTCTTGTTTCAT-ATTTGTCAGCTCAAATT-TTCCTTCTTCATCCTTAAGC-TTTT-T-ATTCAGTACATTCCCGTATTTGTCTTG-----TTTCTCTAAATTT-----TCTATCTTTC---ATTCTGGAGTGTTGTTGCCCACG--CTAT------------------------
gi|129662 : ATTTTTAAATCCTCATTAATTTGAGA-TCAACCCAT-C-CAGTGGGGT-GTGATTG---T---C---TTACAAA--TGCT-GCAATCACCGGTCATGGATGATTGAACG--C-CTTTAAC-TGT-C-T-CCT-TTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-ACTCTC-T--TTGCTTGTGTTTAAATTAACTGGTTTGAGTCCAT----------------------TATCAATA-T----ATAAC-------------------ACTA-------TTA------ATACTTTGTTCTGATTTCAG-ATTTGTCTGCTAAAACT-TTCTATTTTCATCCTAAAGC-TTTT-T-ATTCGGTACATTTCCTTATTAGTC-TG-----TTTCTCTAAA---AAAAAATTATATTTCAGGATTT---AGTGTGCTTACTTATGTGCTAT------------------------AAACT-TG-CTCC--TATACACAACCGTCCATAT----TTCCTACATTTCGC-TTGTTTTCGGTACAGT
gi|129663 : ATTTTGAAATCCTCATTAATTTGAGG-TCAACCTAT-C-AAGTGAGAT-GTGGTTG---T---C---ACACAAT--TGCT-ACAATCGCCGGTCGTGGAGGATTGAGCA--C-CTTTAAC-TGT-C-T---T-CTC-----TAG-ATCTTTCT----T--A---TGGAT--GTCATATTTTAA-TA-ATTGTT-T--TTTC
gi|129663 : ---TATGGATGTCA-TA-TTTTAATAAT---TG-TTTTT--TCAATCACTA-------TTA------ATACTTCGATCTGATTTTAG-ATTTGTCTGCTAAATGT-TTCTTTCTTTATCCTTAAGC-TTTT-T-ATTTTGTACATTCCCGTTTTTGTC-TG-----CGTCACTAAGTTT-----ACTATCTATC---AGTCTTGAGTGTGCTTATTGATGTTCTAT------------------------ATATT-TG-CTTC--GCTACACAAACGTCCATAT----TTCCTTTCTTTCGC-TTGTTTTCGGTATTGTACaatcactattaatacttcgatctgattttagatttgtctgctaaatgtttctttctttatccttaagctttttattttgtacattcccgtttttgtctgcgtcactaagtttactatctatcagtcttgagtgtgcttattgatgttctatatatttgcttcgctacacaaacgtccatatttcctttctttcgcttgttttcggtattgtac
gi|129664 : attttgaaatcctcattaatttgaggtcaacctatcaagtgagatgtggttgtcacacaattgctacaatcgccggtcgtggaggattgagcacctttaactgtcttctctagatctttctTTTTTAAATCCTCATAAAATTGAGG-TCAACCCA------------------------T---C---TTACAAT--CGC----------CGGTCGTGGAGGATTGAGCA--C-CTTAAAC-TGT-T-TTC-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TGTGGAACTCA-TACTTT-TATAAC---TGTTTTTT--TCAAACACTA-------TTA------CTACTCCGTTCTGATTTTAT-ATTTGTCTGCT-TAACTATTCTTTATTCATTCTAACGC-TTTT-T--TTCT----------GTATTAGTC-TG-----TCTCTCTAAGTTT------CTATCAGTC----TTC---AGTAGGCTTACTCATGTTCTGT------------------------GTACT-TG-CTCC--TATACACAATCGTCAATGT----TTCTTACCTTTTCCATTGTTTTAGGTACAGTGC
gi|129665 : TTTTGCAATCCTCCTTCAT---GAGGTCAACCCAC-C-CA---------TGGTTG---TACTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--T-CTATC-------C-T-CAT-TTC-----TTAGATATTTCT----T--A---T
gi|129666 : TTTGAAATCCTCATTGATTTGAAT-TCAACCTAT-C-CGGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGGTTGAACG--C-GTTTCAC-TTT-C-T-T-T--TC-----T-----CTTTCT----T--A---TG--T--CTAACA---ACA-TA-ACATTC-T--TTTCTTATGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-AATAACCATTT-TTTTT--TCAAATACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCAGCTAAAACT-TTCGTTTTTTATCCTAAAGC-TTTTTT-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTGAATTT-----ACTTTCTTTC---ATTTTGGTGTGTGCTTACTCATGTTCTTT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129667 : TTTGAAATCCTCATTGATTTGAGG-TCAACCCAT-C-CAGTGGGGT-GTGGTTG---T---C---TTAAAAT--TACT-ACAATTAGCGGTCGTAGATGATTGAGTG--C-CTTTAAC-TGT-C-TTC-T-CTC-----T---ATCTTTCT----A--A---TG--T--CTAATA---ATA-TA-ACATTT-T--GTTCTTGTGTTTGAACATACCGGTTTGAGTACATATCATGCATTTGA---TATGGTTATTA-TA-TTT-GATAAC---AG-ATGTT--TCAAACACTA-------TCA------TTATTCCGTTTTGGTTTTAG-ATTTTTCAGCTAAAATT-TTCATTCTTCATCCTAAAGT-TTTT-T-ATTCTATACATTCCCGTTTTAGTC-TG-----TTTCTCTAAAT---------TATCTTTC---GTTCTGTAGTGCGCTTACTCGTGTTCTTT------------------------ATACT-TT-CTCT--GATTCAAAACCGTCCATAT----TTCTTGCCTTTGGC-TTGTTTTCGGTACAGTAC
gi|129668 : TTTGAAATTCTCACTAACGTGAGG-TCAGCCCAT-CTCAATTTGAT-GTGGTTT---A---C---TGACTTT--AGCTTAAAAGCACCGGTCGTGGAGGATTAAGCA--C-CTTTCTCTTAC-T-T-C-T-TGC-----T---ATTTTTCC----T--
gi|129669 : TTTGAAATTCTCACTAA---------------AT-C-TAGTGGAAT-GTTGTTG---T---T---TTACAAT--TGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTTAC-TGT-C-T-C-T-CTC-----T---ATCTTTCA----T--A---TG--T--CTAATA---CAA-TA-ACCTCA-T--GTTCTTGTG
gi|129670 : TTTGAAATCCTCATTAACGT-CAGGTCAGCACAT-CTCAGTTTGAT-GTGGCTG---T---CTGGTTA-AA----GCT-TAAACCACCGGTGGTGGAGGATTAAGCA--C-CTTTCTC-TTA-CAT-C-T-TGC-----T---ATCTTTCC----T--A---
gi|129671 : TTAGAAATCCCCGCTCAT---GGGGTCAACCTA----AAG-----C-ATGGTTGCATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-TAT---T-T-T-CT
gi|129672 : TTTGAAATCCTCGTACA---GGAGGTCAACCTA----AAGCA------TGGCTGCATT---C---TTACAAT--TGCT--TAATCACCGGTAGTGGAGGATTAAGCG--C-CTTTC-C-TAT-T-T-T-C-TTA-----C---ATTTTTCTAAACT--A---TT--A--CTACT-----GT-TG-ACTTTTAT--TTTCTT
gi|129673 : TTTGAAATCCTCGATCATT---AGGTCAACCCAAAC-CA---------TGGTTG---TACTC---TTACAAT--TGCT--TAATCATCGGTAGTGGAGGATTTAGCG--C-GTTTC-T-TAT---T-A-T-CTTAAAAAT---GTCTTACT----T--ACCTTG--T--CTGAT------------TTTTA-T--TTTCTT
gi|129674 : TTTTAAATCCTCACACGCATGAGT-TCAATCCAT-T-C--TAGGAT-GTGATTACAAT---C---TGACAAA--TGTT--CAGTCACTGGTCGTGG
gi|129675 : TTGAAATCCTCATTGATTTGAGG-TGAACCCAT-C-CAGTGGGAT-GTGGCTG---T---C---TCACAATATTGTT-ATAATCACCGGTCGTGGAGGATTGAGCG--A--TTTTAC--------------TC-----T---ATCTTTCT----T----------------------------------------TTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-----------------GGATATCA-AA-TTC-GATAAC---TG-TTTTT--TCAAACACTACTGATGATTA------GTATTCCATTATGGTTTCAG-ATTTGTCTGCTAAAACT-TTTATTCTTTATCCTAAAGC-TTTT-TTGTTCTGTACATTCTCGTATTAGTC-TG-----TTTCTCTGAATTT-----AGTATCTTTT---ATTCCGGAGAGTGCTTACTCGTGTTTTAT------------------------ATACT-TG-CTTC--GATACAAAACCGTCCGTAT----TTCGTACCTTTCGC-TTGTTTTTGGAACAGTGCtaaattatacactcgctaact
gi|129676 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC
gi|129677 : AAATCCCCATCCAT---GGGGTCAACC-A-----AAT----T-ACGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTctatattct
gi|129678 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCGCCGGTCGTGGAGGATTAAGCG--C-CTTTC
gi|129679 : AAATCCCCATCCAT---GGGGTCAACCAAA-T-CA---------CGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGGCGTGGAGGATTAAGCG--C-CTTTC-C-TAT-A-T-T-T-TCA-----T---ATACTTCT----ccatattcttacatattctcatatacttttgcacttacttttcttttc
gi|129680 : AAATCCACATCCGTT---GGGTCGACCAAA-C-TA---------CGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-TAT-A-T-T-T-TTA-----C---ATA-TTCT----C--A---TA--TA-CTTCTG---CAC-TG-ACTTTTAT--TTTCTTgtactgacttttattttctt
gi|129681 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCA--C-CTTTC-C-TATAT-T-C-T-TACA----T---AT-TTTCA----T--A---TACTT--CT-------ACACTA-ACTTT--TAATTTCTT
gi|129682 : GGTTAACCCAT-C-TTGTGGGAT-GTGGTTG---C---C---ATTCAAT--TGCT-ACAATTGCCGGTCGTGGATGATTGAGAGTCC-CTTTCAC-TGT-T-T-TAT-CTC-----T---GTATTTCT----T--C---TG--T--CTCGTA---AAG-TA-ACATCT-T--TTTCTTGTGTTTGAAGAAACCGGTTTGAGTCCATAT-----------------------------TTT-GGTAAC---TG-GTTAT--TCTAACACTG------------------AC------CTCATTTCAGTATTT-TCTGAT-AAATT-TTCTTTCTTTATcaaatttcttagctaacaatacttgttttatctttccatccttaatgttttcttcatcttgttttcctttataactttactttatttttgttttcctatcttaccttacctcattcttacttttctttcttttcatactatatttttcttatcctttccatccttacttaattcttgttttctttttcgctcttatttcaatct
gi|129683 : ttaaattaaGAGGTCAACCCAC-C-CA---------CGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTTCC-TAT---T-T-T-CT------T---A-CATACT----T--A---TA--CTACTGCTG---CTG-TG-ACTTTTAT--TTTCTT
gi|129684 : tGGATCATGGTTGCATT---C---TTACAAT--TGCT--TAATCACCGGTTGTGGAGGATTAAGCG--C-CTTTC-C-CAT-T-T-T-C-CTA-----C---ATATTTAT----T--A---
gi|129685 : catcgcaca-C-TAGTGGAAT-GTTGTTG---T---T---TTACAAT--TGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTTAC-TG----T-C-T-CTC-----T---GTCTTTCA----T--A---TG--T--CTAATA---AAG-TA-ACCTCA-T--TATCTTGTGTTTGAACAAACACGCGTGAGTCCATAT-------TTAC---TGTAGA
gi|129686 : GTGGGAT-GTGGTTG---T---C---TTACAGT--TGCT-ACAATCACC-----------ACTGGGCG--C-CTTTAAC-TGT-C-T-T-TTCTC-----T---ATCTTTCT----T--A---TG--T--CAAATA---ACA-TA-ACTTT-------TCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTGA---TATGGATATCA-TA-TTT-GATAAC---TG-TTTTT--TAAAACACTA-------TTA------GTACTCCGTTCTGGTTTTTG-ATTTGTCAGCTAAAACT-TTCGTTCTTTACCCTAAAAC-TTTT-T-ATTCTGTACATTCCAGTATTAGTC-T------TTTCTCTAAATTT-----GCTATCTTTT---ATTCTGGAGTGTGCTTACTCACGTTTTAT------------------------GTACT-TG-CTCC--GCTAC-AAACCGTCCATAT----TTCTTATCTTTCGT-TTGTTTTCGGTACAGTACgttca
gi|129687 : TG---T---T---TTACAAT--TGCT-ACTTTCACCGGTCGTGGAGGATTTAGCG--CATTTTTAC-TGT-C-TTC-T-CTC-----T---ATCTTCTT----TTGA---TG--T--CTAATA---ACA-TA-ACTTTC-T--TTTCTTGTATTTGAATAAATCGTTTTGAGTCCATAT-------TTAT---TATGGATATCA-TA-TTC-GATAAC---TG-TTTTT--TCCAACACTA-------TAA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTTCATCCTAAAGCTTTTT-T-ATTACGTACAATCCCGTATAAGTC-TG-----TTTCTCTAAATTT-----ACTCTCTTTC---ATTCTGGGGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATATTTCGTTCCTATCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129688 : TA---ACA-TA-ACTTTC-T--TTTCATGTGTTTGAATAAACCGGTTTGAGTCCGTA---------TAACGTTCTGG-TTTCA-GA-TTT-G---AC---TG-
gi|129688 : CGTTCTGGTTTCAG-ATTTGACTGA-AAAACG-TTCGTTCTTCATCTTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTTTATTT-----AATATCTTTC---ATTCTGGAATGTGCTTTCTCATGTTCTTT------------------------TTACT-TG-CTCC--GATA------TTTCCATAT----TTCTGACCTTTCGC-TTGTTTTCGGTGCaaaaacgttcgttcttcatcttaaagctttttattctgtacattcccgtattagtctgtttctctttatttaatatctttcattctggaatgtgctttctcatgttctttttacttgctccgatatttccatatttctgacctttcgcttgttttcggtgc
Alignments
lowQualScore : 1111111 111111111 1111111 11 1111111 222222222222222222222222
lowQualScore : 1 6666666 0 55 000000000 1 9999999 222 11 33 11 1 88 1 2222222 1 55555 444 3333 22 222 44 44 44444 1 1 88 22 7777777 333 2 2 9 444 44 33 8888888 777777 2 2 1 2 2 2 2 66666 44444 444 444444444444444444444444 2 2 33 2 5555 2
lowQualScore : . ....... . .. ......... . ....... ... .. .. .. . .. . ....... . ..... ... .... .. ... .. .. ..... . . .. .. ....... ... . . . ... .. .. ....... ...... . . . . . . . ..... ..... ... ........................ . . .. . .... .
lowQualScore : 0 9999999 2 00 999999999 2 0000000 111 77 55 77 2 88 4 9999999 4 00000 555 0000 00 777 88 11 22222 7 7 00 33 6666666 999 4 4 4 111 22 44 1111111 222222 4 4 0 5 5 5 5 22222 77777 444 111111111111111111111111 7 7 77 3 7777 7
consensus : ATTTTGAAATCCTCATTNATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTCAC-TGT-C-T-C-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-GATAAC---TG-NTTTT--TCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
Reference ( family-595 ) : ATTTTGAAATCCTCATTNATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTCAC-TGT-C-T-C-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-GATAAC---TG-NTTTT--TCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129654 : ATTTTGAAATCCTCATTGATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTTAC-TGA-A-T-C-T-CTC-----T---GTCTTTCT----T--A---TG--T--ATAATA---ACA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTGTGAGTCCACAT-------TTAA---TATGTATGGCA-CA-TTT-GTTAAC---CG-GTTTT--TAAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAATC-TTCGTTCTTTATTCTAAAGC-TTTT-T-ATTCTGTATATTCCCTTATTTGTC-TG-----TTTGTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTAACTCATGTTCTTT------------------------ATACT-TT-CTCC--GATACAAAACTGTCCCTAT----GTCTTACTTTTCGC-TTGTTTTCGGTACAGTAC
gi|129655 : ATTTTAAAATCCTCATTGATTTGAGG-TCAACCCAT-C-CAGTGGGAT-GTGGTCG---T---C---T
gi|129656 : ATTTTGAAATTCTCGATAATTTGAGG-TCAACCCAT-C-CAGCGGGAT-GTGGTTG---T---C---TTACAAA--TGCT-ATAATCACCGGTCGTGGAGGATTGAGCA--T-CTTTAAC-TGG-C-TTC-T-CTC-----T---ATCGTTCT----T--A---TG--T--CTCACT---AGA-TATACTTTC-T--TTTCTTGTGTTTGAATAAACCGGGTTGAGTCCATAT-------TTAA---TATGGATGTCA-TA-TTTTGATGAC---TG-TTATA--TCAAACACTA-------TTA------GTACTCCGTTCTGATTTTGG-ATTTGTCTGCTAAAAAT-TTCTGTATTTATCCTGAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTA-TG-----TTTCTCTATGTCT-----ACAATCTCTC---CATCTTGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACACAATCGTCCATAT----TTCTTACCTTTCGC-TTATTTTCGGTACA
gi|129657 : ATTTTGAAATCCTCATCAATTTGAGG-TCAACCCAT-C-CAGCTGGAT-GTGGTTG---T---C---TTACAAT--TGTT-ACAATCACCGGACGTGGAGGATTCAGCA--C-CTTTAAC-TGT-C-TTC-T-CTC-----C---ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTAATGTCCATTT-------TTAA---TATGCATGTCA-TA-TTTTGATAAC---TG-GTTTT--TCAAACACTA-------TTACTTTTAGTACTCCGTTCTGATTTTAG-ATATGTCTGCTAAAACT-TTCTTAATTCATCCTAACAC-TTTT-T-ATTCTGTGCATTCCCATATAAGTC-TG-----TTTCTCCAAGTTT-----ACTATCTTTC---AGTCTTGAGTTTGCTTACTTATGTTCTAT------------------------ATACT-CG-CTTCTATATACACAACCGTACATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129658 : ATTTTGATATCCTCATTGATATGAGG-TCAACCCAT-C-CAGTGGAAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAGTCATCAGTCGTGGAGGATTGAGCG--C-CTTTTAC-TGT-CCT-C-T-CTC-----T---TTCTCTCT----T--A---TG--T--CTAATA---ATA-TA-ACTTTT-T--GTTCTTGTTTTT---CAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATTA-TA-TTT-GATAAC---TG-TTTTTTTTCAAACACTA-------TTA------GTACTCCATTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTACATCCTAAAGC-TTTT-T-AT--------------------TC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTTGAGTTTGCTTACTCATCTTCTAT------------------------ATACT-TT-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGG-TTGTTTTCGGTACAGTAC
gi|129659 : ATTTTGAAATCCTCATTAATTTGAGG-TCAACCAAT-C-CAGTGGTAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-ATTTAAC-TGT-T-TTC-T-TTC-----T---GTCTTTCT----T--A---TG--C--CTAATA---CAA-TA-ACTTTC-T--TTTCTTGTGTTGGAATAAACCGGTTTAAGTCCATAT-------TTAA---TATAGATGTCA-TA-TTTTAATAAC---TG-GTTTT--ACAAACACTA-------TTA------GTACTCCGTTTTGATTTCAG-ATTGGTCTGTTTAAAAT-TTCCTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCG----AGTC-TGTTTTATTTCTCTAAGTTT-----ACTGTATTTC---AGTCTGGA-CGTGCAAAATCATGTTCTAT------------------------ATACT-TG-CGTT--GATACATAACCGTTTATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGT
gi|129660 : ATTTTGAAATCCTCAATGATTTGAGG-TCAACCTAT-C-CAGTGGAAT-GTGGTTG---T---C---TTATAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTTGC-TGT-C-TTC-T-CTC-----T---ATCTTTCT----T--C---TG--T--CTAATA---ATA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCTTAT-------TTAA---TATGGATAACA-AA-TTT-GATAAC---TG-GTTTT--T-AAACACTA-------TTG------GTACTCCGTTCTGCTTTCAG-ATTTGTCTTCTAAAACT-TTCGTTCTTCACCCTTAAGC-TAAT-T-ATTCCGTACTTTCCCGTAATAGTC-GG-----TTTCTCTAAATTT-----ACTATATTTC---AATCTGGAGTGTGCTTACTTGTGTTTTATATACTTTCTGAATAAACTATGTCTATGCTATGTCTCA--GATACAAAAC-GTCCATAT----TTCTTAACTTGTGC-TTG-TTTCTGTACAGTA
gi|129661 : ATTTTAAAATCCTCATTGATT-AGAGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTATAAT--TGCT-ACAATCACCAGTCGTGGAGGATTGAGCG----CTTTTAC-TGT-CTT-C-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ATA-TA-ACTTTC-T--GTTCTTGCGTTTAAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-GT-TTT-GATAAC---TG-GTTTT--TCAAACACTA-------TTA------GTAATCCGTTCTTGTTTCAT-ATTTGTCAGCTCAAATT-TTCCTTCTTCATCCTTAAGC-TTTT-T-ATTCAGTACATTCCCGTATTTGTCTTG-----TTTCTCTAAATTT-----TCTATCTTTC---ATTCTGGAGTGTTGTTGCCCACG--CTAT------------------------
gi|129662 : ATTTTTAAATCCTCATTAATTTGAGA-TCAACCCAT-C-CAGTGGGGT-GTGATTG---T---C---TTACAAA--TGCT-GCAATCACCGGTCATGGATGATTGAACG--C-CTTTAAC-TGT-C-T-CCT-TTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-ACTCTC-T--TTGCTTGTGTTTAAATTAACTGGTTTGAGTCCAT----------------------TATCAATA-T----ATAAC-------------------ACTA-------TTA------ATACTTTGTTCTGATTTCAG-ATTTGTCTGCTAAAACT-TTCTATTTTCATCCTAAAGC-TTTT-T-ATTCGGTACATTTCCTTATTAGTC-TG-----TTTCTCTAAA---AAAAAATTATATTTCAGGATTT---AGTGTGCTTACTTATGTGCTAT------------------------AAACT-TG-CTCC--TATACACAACCGTCCATAT----TTCCTACATTTCGC-TTGTTTTCGGTACAGT
gi|129663 : ATTTTGAAATCCTCATTAATTTGAGG-TCAACCTAT-C-AAGTGAGAT-GTGGTTG---T---C---ACACAAT--TGCT-ACAATCGCCGGTCGTGGAGGATTGAGCA--C-CTTTAAC-TGT-C-T---T-CTC-----TAG-ATCTTTCT----T--A---TGGAT--GTCATATTTTAA-TA-ATTGTT-T--TTTC
gi|129663 : ---TATGGATGTCA-TA-TTTTAATAAT---TG-TTTTT--TCAATCACTA-------TTA------ATACTTCGATCTGATTTTAG-ATTTGTCTGCTAAATGT-TTCTTTCTTTATCCTTAAGC-TTTT-T-ATTTTGTACATTCCCGTTTTTGTC-TG-----CGTCACTAAGTTT-----ACTATCTATC---AGTCTTGAGTGTGCTTATTGATGTTCTAT------------------------ATATT-TG-CTTC--GCTACACAAACGTCCATAT----TTCCTTTCTTTCGC-TTGTTTTCGGTATTGTACaatcactattaatacttcgatctgattttagatttgtctgctaaatgtttctttctttatccttaagctttttattttgtacattcccgtttttgtctgcgtcactaagtttactatctatcagtcttgagtgtgcttattgatgttctatatatttgcttcgctacacaaacgtccatatttcctttctttcgcttgttttcggtattgtac
gi|129664 : attttgaaatcctcattaatttgaggtcaacctatcaagtgagatgtggttgtcacacaattgctacaatcgccggtcgtggaggattgagcacctttaactgtcttctctagatctttctTTTTTAAATCCTCATAAAATTGAGG-TCAACCCA------------------------T---C---TTACAAT--CGC----------CGGTCGTGGAGGATTGAGCA--C-CTTAAAC-TGT-T-TTC-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---AGA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TGTGGAACTCA-TACTTT-TATAAC---TGTTTTTT--TCAAACACTA-------TTA------CTACTCCGTTCTGATTTTAT-ATTTGTCTGCT-TAACTATTCTTTATTCATTCTAACGC-TTTT-T--TTCT----------GTATTAGTC-TG-----TCTCTCTAAGTTT------CTATCAGTC----TTC---AGTAGGCTTACTCATGTTCTGT------------------------GTACT-TG-CTCC--TATACACAATCGTCAATGT----TTCTTACCTTTTCCATTGTTTTAGGTACAGTGC
gi|129665 : TTTTGCAATCCTCCTTCAT---GAGGTCAACCCAC-C-CA---------TGGTTG---TACTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--T-CTATC-------C-T-CAT-TTC-----TTAGATATTTCT----T--A---T
gi|129666 : TTTGAAATCCTCATTGATTTGAAT-TCAACCTAT-C-CGGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGGTTGAACG--C-GTTTCAC-TTT-C-T-T-T--TC-----T-----CTTTCT----T--A---TG--T--CTAACA---ACA-TA-ACATTC-T--TTTCTTATGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-AATAACCATTT-TTTTT--TCAAATACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCAGCTAAAACT-TTCGTTTTTTATCCTAAAGC-TTTTTT-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTGAATTT-----ACTTTCTTTC---ATTTTGGTGTGTGCTTACTCATGTTCTTT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129667 : TTTGAAATCCTCATTGATTTGAGG-TCAACCCAT-C-CAGTGGGGT-GTGGTTG---T---C---TTAAAAT--TACT-ACAATTAGCGGTCGTAGATGATTGAGTG--C-CTTTAAC-TGT-C-TTC-T-CTC-----T---ATCTTTCT----A--A---TG--T--CTAATA---ATA-TA-ACATTT-T--GTTCTTGTGTTTGAACATACCGGTTTGAGTACATATCATGCATTTGA---TATGGTTATTA-TA-TTT-GATAAC---AG-ATGTT--TCAAACACTA-------TCA------TTATTCCGTTTTGGTTTTAG-ATTTTTCAGCTAAAATT-TTCATTCTTCATCCTAAAGT-TTTT-T-ATTCTATACATTCCCGTTTTAGTC-TG-----TTTCTCTAAAT---------TATCTTTC---GTTCTGTAGTGCGCTTACTCGTGTTCTTT------------------------ATACT-TT-CTCT--GATTCAAAACCGTCCATAT----TTCTTGCCTTTGGC-TTGTTTTCGGTACAGTAC
gi|129668 : TTTGAAATTCTCACTAACGTGAGG-TCAGCCCAT-CTCAATTTGAT-GTGGTTT---A---C---TGACTTT--AGCTTAAAAGCACCGGTCGTGGAGGATTAAGCA--C-CTTTCTCTTAC-T-T-C-T-TGC-----T---ATTTTTCC----T--
gi|129669 : TTTGAAATTCTCACTAA---------------AT-C-TAGTGGAAT-GTTGTTG---T---T---TTACAAT--TGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTTAC-TGT-C-T-C-T-CTC-----T---ATCTTTCA----T--A---TG--T--CTAATA---CAA-TA-ACCTCA-T--GTTCTTGTG
gi|129670 : TTTGAAATCCTCATTAACGT-CAGGTCAGCACAT-CTCAGTTTGAT-GTGGCTG---T---CTGGTTA-AA----GCT-TAAACCACCGGTGGTGGAGGATTAAGCA--C-CTTTCTC-TTA-CAT-C-T-TGC-----T---ATCTTTCC----T--A---
gi|129671 : TTAGAAATCCCCGCTCAT---GGGGTCAACCTA----AAG-----C-ATGGTTGCATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-TAT---T-T-T-CT
gi|129672 : TTTGAAATCCTCGTACA---GGAGGTCAACCTA----AAGCA------TGGCTGCATT---C---TTACAAT--TGCT--TAATCACCGGTAGTGGAGGATTAAGCG--C-CTTTC-C-TAT-T-T-T-C-TTA-----C---ATTTTTCTAAACT--A---TT--A--CTACT-----GT-TG-ACTTTTAT--TTTCTT
gi|129673 : TTTGAAATCCTCGATCATT---AGGTCAACCCAAAC-CA---------TGGTTG---TACTC---TTACAAT--TGCT--TAATCATCGGTAGTGGAGGATTTAGCG--C-GTTTC-T-TAT---T-A-T-CTTAAAAAT---GTCTTACT----T--ACCTTG--T--CTGAT------------TTTTA-T--TTTCTT
gi|129674 : TTTTAAATCCTCACACGCATGAGT-TCAATCCAT-T-C--TAGGAT-GTGATTACAAT---C---TGACAAA--TGTT--CAGTCACTGGTCGTGG
gi|129675 : TTGAAATCCTCATTGATTTGAGG-TGAACCCAT-C-CAGTGGGAT-GTGGCTG---T---C---TCACAATATTGTT-ATAATCACCGGTCGTGGAGGATTGAGCG--A--TTTTAC--------------TC-----T---ATCTTTCT----T----------------------------------------TTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-----------------GGATATCA-AA-TTC-GATAAC---TG-TTTTT--TCAAACACTACTGATGATTA------GTATTCCATTATGGTTTCAG-ATTTGTCTGCTAAAACT-TTTATTCTTTATCCTAAAGC-TTTT-TTGTTCTGTACATTCTCGTATTAGTC-TG-----TTTCTCTGAATTT-----AGTATCTTTT---ATTCCGGAGAGTGCTTACTCGTGTTTTAT------------------------ATACT-TG-CTTC--GATACAAAACCGTCCGTAT----TTCGTACCTTTCGC-TTGTTTTTGGAACAGTGCtaaattatacactcgctaact
gi|129676 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC
gi|129677 : AAATCCCCATCCAT---GGGGTCAACC-A-----AAT----T-ACGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTctatattct
gi|129678 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCGCCGGTCGTGGAGGATTAAGCG--C-CTTTC
gi|129679 : AAATCCCCATCCAT---GGGGTCAACCAAA-T-CA---------CGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGGCGTGGAGGATTAAGCG--C-CTTTC-C-TAT-A-T-T-T-TCA-----T---ATACTTCT----ccatattcttacatattctcatatacttttgcacttacttttcttttc
gi|129680 : AAATCCACATCCGTT---GGGTCGACCAAA-C-TA---------CGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC-C-TAT-A-T-T-T-TTA-----C---ATA-TTCT----C--A---TA--TA-CTTCTG---CAC-TG-ACTTTTAT--TTTCTTgtactgacttttattttctt
gi|129681 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTTGTATT---C---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCA--C-CTTTC-C-TATAT-T-C-T-TACA----T---AT-TTTCA----T--A---TACTT--CT-------ACACTA-ACTTT--TAATTTCTT
gi|129682 : GGTTAACCCAT-C-TTGTGGGAT-GTGGTTG---C---C---ATTCAAT--TGCT-ACAATTGCCGGTCGTGGATGATTGAGAGTCC-CTTTCAC-TGT-T-T-TAT-CTC-----T---GTATTTCT----T--C---TG--T--CTCGTA---AAG-TA-ACATCT-T--TTTCTTGTGTTTGAAGAAACCGGTTTGAGTCCATAT-----------------------------TTT-GGTAAC---TG-GTTAT--TCTAACACTG------------------AC------CTCATTTCAGTATTT-TCTGAT-AAATT-TTCTTTCTTTATcaaatttcttagctaacaatacttgttttatctttccatccttaatgttttcttcatcttgttttcctttataactttactttatttttgttttcctatcttaccttacctcattcttacttttctttcttttcatactatatttttcttatcctttccatccttacttaattcttgttttctttttcgctcttatttcaatct
gi|129683 : ttaaattaaGAGGTCAACCCAC-C-CA---------CGGTTG---TATTC---TTACAAT--TGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTTCC-TAT---T-T-T-CT------T---A-CATACT----T--A---TA--CTACTGCTG---CTG-TG-ACTTTTAT--TTTCTT
gi|129684 : tGGATCATGGTTGCATT---C---TTACAAT--TGCT--TAATCACCGGTTGTGGAGGATTAAGCG--C-CTTTC-C-CAT-T-T-T-C-CTA-----C---ATATTTAT----T--A---
gi|129685 : catcgcaca-C-TAGTGGAAT-GTTGTTG---T---T---TTACAAT--TGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTTAC-TG----T-C-T-CTC-----T---GTCTTTCA----T--A---TG--T--CTAATA---AAG-TA-ACCTCA-T--TATCTTGTGTTTGAACAAACACGCGTGAGTCCATAT-------TTAC---TGTAGA
gi|129686 : GTGGGAT-GTGGTTG---T---C---TTACAGT--TGCT-ACAATCACC-----------ACTGGGCG--C-CTTTAAC-TGT-C-T-T-TTCTC-----T---ATCTTTCT----T--A---TG--T--CAAATA---ACA-TA-ACTTT-------TCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTGA---TATGGATATCA-TA-TTT-GATAAC---TG-TTTTT--TAAAACACTA-------TTA------GTACTCCGTTCTGGTTTTTG-ATTTGTCAGCTAAAACT-TTCGTTCTTTACCCTAAAAC-TTTT-T-ATTCTGTACATTCCAGTATTAGTC-T------TTTCTCTAAATTT-----GCTATCTTTT---ATTCTGGAGTGTGCTTACTCACGTTTTAT------------------------GTACT-TG-CTCC--GCTAC-AAACCGTCCATAT----TTCTTATCTTTCGT-TTGTTTTCGGTACAGTACgttca
gi|129687 : TG---T---T---TTACAAT--TGCT-ACTTTCACCGGTCGTGGAGGATTTAGCG--CATTTTTAC-TGT-C-TTC-T-CTC-----T---ATCTTCTT----TTGA---TG--T--CTAATA---ACA-TA-ACTTTC-T--TTTCTTGTATTTGAATAAATCGTTTTGAGTCCATAT-------TTAT---TATGGATATCA-TA-TTC-GATAAC---TG-TTTTT--TCCAACACTA-------TAA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTTCATCCTAAAGCTTTTT-T-ATTACGTACAATCCCGTATAAGTC-TG-----TTTCTCTAAATTT-----ACTCTCTTTC---ATTCTGGGGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATATTTCGTTCCTATCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129688 : TA---ACA-TA-ACTTTC-T--TTTCATGTGTTTGAATAAACCGGTTTGAGTCCGTA---------TAACGTTCTGG-TTTCA-GA-TTT-G---AC---TG-
gi|129688 : CGTTCTGGTTTCAG-ATTTGACTGA-AAAACG-TTCGTTCTTCATCTTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTTTATTT-----AATATCTTTC---ATTCTGGAATGTGCTTTCTCATGTTCTTT------------------------TTACT-TG-CTCC--GATA------TTTCCATAT----TTCTGACCTTTCGC-TTGTTTTCGGTGCaaaaacgttcgttcttcatcttaaagctttttattctgtacattcccgtattagtctgtttctctttatttaatatctttcattctggaatgtgctttctcatgttctttttacttgctccgatatttccatatttctgacctttcgcttgttttcggtgc
blockSeqs : G TTGAGG AA TCAATTTGA C TACT TGG AT TA TC A AA T CTTC T AAAAA TAG AAAC TG CCT GA TA TTTTA C T TA AA CATGCAT CGT A C T CAT TT TT CTGATGA CTTTTA T A T T T T T TTTTA AAAAA AGG ATACTTTCTGAATAAACTATGTCT A T TA C TTCG A
blockSeqs : A TTGAGG T TCAGTTTGA . CATT . . A . . AA . CTTC . A AG . . . CT A AG . . TA . . . . . T . T . . . . . T . . . . . . . . . . . C . .
blockSeqs : A TTGAGG T CAGTGGGA . CATT . . A . . TA . CCTC . . . . . . . . AG . . TA . . . . . T . G . . . . . G . . . . . . . . . . . A . .
blockSeqs : G ATGAGG T CAGCGGGA . TACT . . A . . AA . TTTC . . . . . . . . AT . . C . . . . . T . T . . . . . C . . . . . . . . . . . T . .
blockSeqs : A TTGAGG T CAGCTGGA . CAAT . . A . . TG . CTTC . . . . . . . . CA . . C . . . . . . . G . . . . . G . . . . . . . . . . . A . .
blockSeqs : G TTGAGG T CAGTGGAA . TATT . . A . . TA . CTTC . . . . . . . . AT . . T . . . . . . . G . . . . . C . . . . . . . . . . . C . .
blockSeqs : G TAGAGG T CAGTGGTA . TATT . . A . . AA . CTCC . . . . . . . . AT . . C . . . . . . . G . . . . . T . . . . . . . . . . . C . .
blockSeqs : A TTGAGA T CAGTGGAA . TATT . . G . . AA . TTTC . . . . . . . . AG . . C . . . . . . . T . . . . . T . . . . . . . . . . . C . .
blockSeqs : A TTGAGG T CAGTGGGA . TATT . . A . . AA . CTCA . . . . . . . . AG . . C . . . . . . . T . . . . . T . . . . . . . . . . . A . .
blockSeqs : A TTGAGG T CAGTGGGG . TATT . . A . . CA . CTTC . . . . . . . . AC . . C . . . . . . . A . . . . . G . . . . . . . . . . . A . .
blockSeqs : C TTGAAT C AAGTGAGA . TATT . . A . . AA . CATC . . . . . . . . AT . . T . . . . . . . T . . . . . A . . . . . . . . . . . A . .
blockSeqs : G TTGAGG T CGGTGGGA . TATT . . A . . CT . ATTC . . . . . . . . CA . . C . . . . . . . G . . . . . A . . . . . . . . . . . A . .
blockSeqs : G GTGAGG T CAGTGGGG . CATT . . T . . TA . TTTA . . . . . . . . CA . . C . . . . . . . T . . . . . T . . . . . . . . . . . A . .
blockSeqs : A GTCAGG T TAGTGGAA . T . . A . . CT . CTTC . . . . . . . . AC . . T . . . . . . . T . . . . . G . . . . . . . . . . . . . .
blockSeqs : A ATGAGT T CAGTGGGA . T . . A . . TA . CTT . . . . . . . . AA . . A . . . . . . . . . . . . . G . . . . . . . .
blockSeqs : A TTGAGG T TTGTGGGA . T . . A . . CA . TTC . . . . . . . . CT . . A . . . . . . . . . G
blockSeqs : C GGAGG T TAGTGGAA . T . . A . . TC . CTC . . . . . . . . AA . . T . .
blockSeqs : C GAGG T CTAGGA . T . . A . . TA . TTT . . . . . . . . AC . . A .
blockSeqs : C GGGG A AAGCA . T . . . . . AA . ATT . . . . . . . . AC . . C .
blockSeqs : C TAGG A AAG . T . . . . . TA . ATT . . . . . . . . AC . . C .
blockSeqs : G GGGG A AAT . T . . . . . C . TTT . . . . . . . . G . . . .
blockSeqs : C GGGG A CA . T . . . . . C . CTT . . . . . . . . . . . . .
blockSeqs : C GGGG A CA . T . . . . . C . CT . . . . . . . . . . .
blockSeqs : C GGGG T CA . T . . . . . C . TT . . . . . .
blockSeqs : C TGGG C TA . T . . . . . C . TA . . . . . .
blockSeqs : C GGGG . CA . A . . . . . C . TT . . . . .
blockSeqs : C . . . . T . . . . . C . TC . . . .
blockSeqs : . . . T . . . . . C . . .
blockSeqs : . . . T . . . . .
blockSeqs : . . C . . . . .
blockSeqs : . T . . . . .
blockSeqs : . T . . .
blockSeqs : T .
blockSeqCons : TTGAGG* CTTC***
originalCons : ATTTTGAAATCCTCATTNATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTCAC-TGT-C-T-C-T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-GATAAC---TG-NTTTT--TCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
finalCons : ATTTTGAAATCCTCATTNATTTGAGG-TCAACCCAT-C-CAGTGGGAT-GTGGTTG---T---C---TTACAAT--TGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTCAC-TGTCTTC---T-CTC-----T---ATCTTTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCATAT-------TTAA---TATGGATATCA-TA-TTT-GATAAC---TG-NTTTT--TCAAACACTA-------TTA------GTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-T-ATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
Alignments
lowQualScore : 111 111111111 1111111 11 1111 222222222222222222222222
lowQualScore : 1 000 0 55 000000000 1 222 6666666 222 11 33 11 1 2222 0 0 1 222 2 2222 22 222 44 55 0 55555 1 1 66 22 7777777 333 2 7 4 444 777 8888888 777777 2 2 1 5 2 2 66666 44444 444 444444444444444444444444 2 2 33 2 5555 2
lowQualScore : . ... . .. ......... . ... ....... ... .. .. .. . .... . . . ... . .... .. ... .. .. . ..... . . .. .. ....... ... . . . ... ... ....... ...... . . . . . . ..... ..... ... ........................ . . .. . .... .
lowQualScore : 0 888 2 00 999999999 2 111 9999999 111 77 55 77 2 1111 1 2 4 444 8 9999 00 666 66 66 5 33333 6 6 33 22 6666666 999 4 1 7 111 555 1111111 222222 4 4 0 0 5 5 22222 77777 444 111111111111111111111111 7 7 77 3 7777 7
consensus : ATTTTGAAATCCTCATTNATTT-GAGGTCAACCCAT-C-CAGTGGGAT-GTGGTT---G---T---CT---TACA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTC--ACTGTCTTCTCTC-T---ATCT-TTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCAT-------ATTTAA---TATGGATATCA-TA-TTT-GATAAC---TG--NTTTTTCAAACACT-------A------TTAGTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-TATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
Reference ( family-595 ) : ATTTTGAAATCCTCATTNATTT-GAGGTCAACCCAT-C-CAGTGGGAT-GTGGTT---G---T---CT---TACA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTC--ACTGTCTTCTCTC-T---ATCT-TTCT----T--A---TG--T--CTAATA---ANA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCAT-------ATTTAA---TATGGATATCA-TA-TTT-GATAAC---TG--NTTTTTCAAACACT-------A------TTAGTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCNTTCTTCATCCTAAAGC-TTTT-TATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129654 : ATTTTGAAATCCTCATTGATTTGGGGGTCAACCCAT-C-CAGTGGGAT-GTGGTT---G---T---CT---TACA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTT--ACTG-AATCTCTC-T---GTCT-TTCT----T--A---TG--T--ATAATA---ACA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTGTGAGTCCAC-------ATTTAA---TATGTATGGCA-CA-TTT-GTTAAC---CG--GTTTTTAAAACACT-------A------TTAGTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAATC-TTCGTTCTTTATTCTAAAGC-TTTT-TATTCTGTATATTCCCTTATTTGTC-TG-----TTTGTCTAAATTT-----ACTATCTTTC---ATTCTGGAGTGTGCTAACTCATGTTCTTT------------------------ATACT-TT-CTCC--GATACAAAACTGTCCCTAT----GTCTTACTTTTCGC-TTGTTTTCGGTACAGTAC
gi|129655 : ATTTTAAAATCCTCATTGATTT-GAGGTCAACCCAT-C-CAGTGGGAT-GTGGTC---G---T---CT---
gi|129656 : ATTTTGAAATTCTCGATAATTT-GAGGTCAACCCAT-C-CAGCGGGAT-GTGGTT---G---T---CT---TACA--AATGCT-ATAATCACCGGTCGTGGAGGATTGAGCA--T-CTTTA--ACTGGCTTCTCTC-T---ATCG-TTCT----T--A---TG--T--CTCACT---AGA-TATACTTTC-T--TTTCTTGTGTTTGAATAAACCGGGTTGAGTCCAT-------ATTTAA---TATGGATGTCA-TA-TTTTGATGAC---TG--TTATATCAAACACT-------A------TTAGTACTCCGTTCTGATTTTGG-ATTTGTCTGCTAAAAAT-TTCTGTATTTATCCTGAAGC-TTTT-TATTCTGTACATTCCCGTATTAGTA-TG-----TTTCTCTATGTCT-----ACAATCTCTC---CATCTTGAGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CTCC--GATACACAATCGTCCATAT----TTCTTACCTTTCGC-TTATTTTCGGTACA
gi|129657 : ATTTTGAAATCCTCATCAATTT-GAGGTCAACCCAT-C-CAGCTGGAT-GTGGTT---G---T---CT---TACA--ATTGTT-ACAATCACCGGACGTGGAGGATTCAGCA--C-CTTTA--ACTGTCTTCTCTC-C---ATCT-TTCT----T--A---TG--T--CTAATA---AGA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTAATGTCCAT-------TTTTAA---TATGCATGTCA-TATTTT-GATAAC---TG--GTTTTTCAAACACT-------ATTACTTTTAGTACTCCGTTCTGATTTTAG-ATATGTCTGCTAAAACT-TTCTTAATTCATCCTAACAC-TTTT-TATTCTGTGCATTCCCATATAAGTC-TG-----TTTCTCCAAGTTT-----ACTATCTTTC---AGTCTTGAGTTTGCTTACTTATGTTCTAT------------------------ATACT-CG-CTTCTATATACACAACCGTACATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129658 : ATTTTGATATCCTCATTGATAT-GAGGTCAACCCAT-C-CAGTGGAAT-GTGGTT---G---T---CT---TACA--ATTGCT-ACAGTCATCAGTCGTGGAGGATTGAGCG--C-CTTTT--ACTGTCCTCTCTC-T---TTCT-CTCT----T--A---TG--T--CTAATA---ATA-TA-ACTTTT-T--GTTCTTGTTTTT---CAAACCGGTTTGAGTCCAT-------ATTTAA---TATGGATATTA-TA-TTT-GATAAC---TGTTTTTTTTCAAACACT-------A------TTAGTACTCCATTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTACATCCTAAAGC-TTTT-TAT--------------------TC-TG-----TTTCTCTAAATTT-----ACTATCTTTC---ATTCTTGAGTTTGCTTACTCATCTTCTAT------------------------ATACT-TT-CTCC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGG-TTGTTTTCGGTACAGTAC
gi|129659 : ATTTTGAAATCCTCATTAATTT-GAGGTCAACCAAT-C-CAGTGGTAT-GTGGTT---G---T---CT---TACA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-ATTTA--ACTGTTTTCTTTC-T---GTCT-TTCT----T--A---TG--C--CTAATA---CAA-TA-ACTTTC-T--TTTCTTGTGTTGGAATAAACCGGTTTAAGTCCAT-------ATTTAA---TATAGATGTCA-TATTTT-AATAAC---TG--GTTTTACAAACACT-------A------TTAGTACTCCGTTTTGATTTCAG-ATTGGTCTGTTTAAAAT-TTCCTTCTTCATCCTAAAGC-TTTT-TATTCTGTACATTCCCG----AGTC-TGTTTTATTTCTCTAAGTTT-----ACTGTATTTC---AGTCTGGA-CGTGCAAAATCATGTTCTAT------------------------ATACT-TG-CGTT--GATACATAACCGTTTATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGT
gi|129660 : ATTTTGAAATCCTCAATGATTT-GAGGTCAACCTAT-C-CAGTGGAAT-GTGGTT---G---T---CT---TATA--ATTGCT-ACAATCACCGGTCGTGGAGGATTGAGCG--C-CTTTT--GCTGTCTTCTCTC-T---ATCT-TTCT----T--C---TG--T--CTAATA---ATA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCTT-------ATTTAA---TATGGATAACA-AA-TTT-GATAAC---TG--GTTTTT-AAACACT-------A------TTGGTACTCCGTTCTGCTTTCAG-ATTTGTCTTCTAAAACT-TTCGTTCTTCACCCTTAAGC-TAAT-TATTCCGTACTTTCCCGTAATAGTC-GG-----TTTCTCTAAATTT-----ACTATATTTC---AATCTGGAGTGTGCTTACTTGTGTTTTATATACTTTCTGAATAAACTATGTCTATGCTATGTCTCA--GATACAAAAC-GTCCATAT----TTCTTAACTTGTGC-TTG-TTTCTGTACAGTA
gi|129661 : ATTTTAAAATCCTCATTGATTA-GAGGTCAACCCAT-C-CAGTGGGAT-GTGGTT---G---T---CT---TATA--ATTGCT-ACAATCACCAGTCGTGGAGGATTGAGCG--C-TTTT---ACTGTCTTCTCTC-T---ATCT-TTCT----T--A---TG--T--CTAATA---ATA-TA-ACTTTC-T--GTTCTTGCGTTTAAATAAACCGGTTTGAGTCCAT-------ATTTAA---TATGGATATCA-GT-TTT-GATAAC---TG--GTTTTTCAAACACT-------A------TTAGTAATCCGTTCTTGTTTCAT-ATTTGTCAGCTCAAATT-TTCCTTCTTCATCCTTAAGC-TTTT-TATTCAGTACATTCCCGTATTTGTCTTG-----TTTCTCTAAATTT-----TCTATCTTTC---ATTCTGGAGTGTTGTTGCCCACG--CTAT------------------------
gi|129662 : ATTTTTAAATCCTCATTAATTT-GAGATCAACCCAT-C-CAGTGGGGT-GTGATT---G---T---CT---TACA--AATGCT-GCAATCACCGGTCATGGATGATTGAACG--C-CTTTA--ACTGTCTCCTTTC-T---ATCT-TTCT----T--A---TG--T--CTAATA---AGA-TA-ACTCTC-T--TTGCTTGTGTTTAAATTAACTGGTTTGAGTCCAT----------------------TATCAATA-T----ATAAC------------------ACT-------A------TTAATACTTTGTTCTGATTTCAG-ATTTGTCTGCTAAAACT-TTCTATTTTCATCCTAAAGC-TTTT-TATTCGGTACATTTCCTTATTAGTC-TG-----TTTCTCTAAA---AAAAAATTATATTTCAGGATTT---AGTGTGCTTACTTATGTGCTAT------------------------AAACT-TG-CTCC--TATACACAACCGTCCATAT----TTCCTACATTTCGC-TTGTTTTCGGTACAGT
gi|129663 : ATTTTGAAATCCTCATTAATTT-GAGGTCAACCTAT-C-AAGTGAGAT-GTGGTT---G---T---CA---CACA--ATTGCT-ACAATCGCCGGTCGTGGAGGATTGAGCA--C-CTTTA--ACTGTCTTCTCTA-G---ATCT-TTCT----T--A---TGGAT--GTCATATTTTAA-TA-ATTGTT-T--TTTC
gi|129663 : ---TATGGATGTCA-TA-TTTTAATAAT---TG--TTTTTTCAATCACT-------A------TTAATACTTCGATCTGATTTTAG-ATTTGTCTGCTAAATGT-TTCTTTCTTTATCCTTAAGC-TTTT-TATTTTGTACATTCCCGTTTTTGTC-TG-----CGTCACTAAGTTT-----ACTATCTATC---AGTCTTGAGTGTGCTTATTGATGTTCTAT------------------------ATATT-TG-CTTC--GCTACACAAACGTCCATAT----TTCCTTTCTTTCGC-TTGTTTTCGGTATTGTACaatcactattaatacttcgatctgattttagatttgtctgctaaatgtttctttctttatccttaagctttttattttgtacattcccgtttttgtctgcgtcactaagtttactatctatcagtcttgagtgtgcttattgatgttctatatatttgcttcgctacacaaacgtccatatttcctttctttcgcttgttttcggtattgtac
gi|129664 : attttgaaatcctcattaatttgaggtcaacctatcaagtgagatgtggttgtcacacaattgctacaatcgccggtcgtggaggattgagcacctttaactgtcttctctagatctttctTTTTTAAATCCTCATAAAATT-GAGGTCAACCCA---------------------------T---CT---TACA--ATCGC----------CGGTCGTGGAGGATTGAGCA--C-CTTAA--ACTGTTTTCTCTC-T---ATCT-TTCT----T--A---TG--T--CTAATA---AGA-TA-ACTTTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCCAT-------ATTTAA---TGTGGAACTCA-TACTTT-TATAAC---TGT-TTTTTTCAAACACT-------A------TTACTACTCCGTTCTGATTTTAT-ATTTGTCTGCT-TAACTATTCTTTATTCATTCTAACGC-TTTT-T-TTCT----------GTATTAGTC-TG-----TCTCTCTAAGTTT------CTATCAGTC----TTC---AGTAGGCTTACTCATGTTCTGT------------------------GTACT-TG-CTCC--TATACACAATCGTCAATGT----TTCTTACCTTTTCCATTGTTTTAGGTACAGTGC
gi|129665 : TTTTGCAATCCTCCTTCAT---GAGGTCAACCCAC-C-CA---------TGGTT---G---TACTCT---TACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--T-CTATC-------CTCATTTC-TTAGATAT-TTCT----T--A---T
gi|129666 : TTTGAAATCCTCATTGATTT-GAATTCAACCTAT-C-CGGTGGGAT-GTGGTT---G---T---CT---TACA--ATTGCT-ACAATCACCGGTCGTGGAGGGTTGAACG--C-GTTTC--ACTTTCTTTTCTC-T--------TTCT----T--A---TG--T--CTAACA---ACA-TA-ACATTC-T--TTTCTTATGTTTGAATAAACCGGTTTGAGTCCAT-------ATTTAA---TATGGATATCA-TA-TTT-AATAACCATTT--TTTTTTCAAATACT-------A------TTAGTACTCCGTTCTGGTTTCAG-ATTTGTCAGCTAAAACT-TTCGTTTTTTATCCTAAAGC-TTTTTTATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTGAATTT-----ACTTTCTTTC---ATTTTGGTGTGTGCTTACTCATGTTCTTT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATAT----TTCTTACCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129667 : TTTGAAATCCTCATTGATTT-GAGGTCAACCCAT-C-CAGTGGGGT-GTGGTT---G---T---CT---TAAA--ATTACT-ACAATTAGCGGTCGTAGATGATTGAGTG--C-CTTTA--ACTGTCTTCTCTC-T---ATCT-TTCT----A--A---TG--T--CTAATA---ATA-TA-ACATTT-T--GTTCTTGTGTTTGAACATACCGGTTTGAGTACATATCATGCATTTGA---TATGGTTATTA-TA-TTT-GATAAC---AG--ATGTTTCAAACACT-------A------TCATTATTCCGTTTTGGTTTTAG-ATTTTTCAGCTAAAATT-TTCATTCTTCATCCTAAAGT-TTTT-TATTCTATACATTCCCGTTTTAGTC-TG-----TTTCTCTAAAT---------TATCTTTC---GTTCTGTAGTGCGCTTACTCGTGTTCTTT------------------------ATACT-TT-CTCT--GATTCAAAACCGTCCATAT----TTCTTGCCTTTGGC-TTGTTTTCGGTACAGTAC
gi|129668 : TTTGAAATTCTCACTAACGT-GAGGTCAGCCCAT-CTCAATTTGAT-GTGGTT---T---A---CT---GACT--TTAGCTTAAAAGCACCGGTCGTGGAGGATTAAGCA--C-CTTTC--TCTTACTTCTTGC-T---ATTT-TTCC----T--
gi|129669 : TTTGAAATTCTCACTAA---------------AT-C-TAGTGGAAT-GTTGTT---G---T---TT---TACA--ATTGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTT--ACTGTC-TCTCTC-T---ATCT-TTCA----T--A---TG--T--CTAATA---CAA-TA-ACCTCA-T--GTTCTTGTG
gi|129670 : TTTGAAATCCTCATTAACGT-CAGGTCAGCACAT-CTCAGTTTGAT-GTGGCT---G---T---CTGGTTA-A--A--GCT-TAAACCACCGGTGGTGGAGGATTAAGCA--C-CTTTC--TCTTACATCTTGC-T---ATCT-TTCC----T--A---
gi|129671 : TTAGAAATCCCCGCTCA--T-GGGGTCAACCTA----AAG-----C-ATGGTT---GCATT---CT---TACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC---CTATTTTCT
gi|129672 : TTTGAAATCCTCGTACAG---GAGGTCAACCTA----AAGCA------TGGCT---GCATT---CT---TACA--ATTGCT--TAATCACCGGTAGTGGAGGATTAAGCG--C-CTTTC---CTATTTTCT-TA-C---ATTT-TTCTAAACT--A---TT--A--CTACT-----GT-TG-ACTTTTAT--TTTCTT
gi|129673 : TTTGAAATCCTCGATCATT---AGGTCAACCCAAAC-CA---------TGGTT---G---TACTCT---TACA--ATTGCT--TAATCATCGGTAGTGGAGGATTTAGCG--C-GTTTCTTATTATCTTAAAAA-T---GTCT-TACT----T--ACCTTG--T--CTGAT------------TTTTA-T--TTTCTT
gi|129674 : TTTTAAATCCTCACACGCAT-GAGTTCAATCCAT-T-C--TAGGAT-GTGATTACAA---T---CT---GACA--AATGTT--CAGTCACTGGTCGTGG
gi|129675 : TTGAAATCCTCATTGATTT-GAGGTGAACCCAT-C-CAGTGGGAT-GTGGCT---G---T---CT---CACAATATTGTT-ATAATCACCGGTCGTGGAGGATTGAGCG----ATTTT--A---------CTC-T---ATCT------------------------------------------TTC-T--TTTCTTGTGTTTGAATAAACCGGTTTGAGTCC--------------A---TATGGATATCA-AA-TTC-GATAAC---TG--TTTTTTCAAACACTACTGATGA------TTAGTATTCCATTATGGTTTCAG-ATTTGTCTGCTAAAACT-TTTATTCTTTATCCTAAAGCTTTTT-TGTTCTGTACATTCTCGTATTAGTC-TG-----TTTCTCTGAATTT-----AGTATCTTTT---ATTCCGGAGAGTGCTTACTCGTGTTTTAT------------------------ATACT-TG-CTTC--GATACAAAACCGTCCGTAT----TTCGTACCTTTCGC-TTGTTTTTGGAACAGTGCtaaattatacactcgctaact
gi|129676 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTT---GTATT---CT---TACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC---CTATATTCT
gi|129677 : AAATCCCCATCCAT---GGGGTCAACC-A-----AAT----T-ACGGTT---G---TATTCT---TACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTT
gi|129678 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTT---GTATT---CT---TACA--ATTGCT--TAATCGCCGGTCGTGGAGGATTAAGCG--C-CTTTC---CCATATTCT----T---ACATATTCT----C--A---TA--TA-CTTTTGC--ACT-TA-CTTTTC-T--TTTC
gi|129679 : AAATCCCCATCCAT---GGGGTCAACCAAA-T-CA---------CGGTT---GTATT---CT---TACA--ATTGCT--TAATCACCGGGCGTGGAGGATTAAGCG--C-CTTTC---CTATATTTTC-A-T---ATAC-TTCT----
gi|129680 : AAATCCACATCCGTT---GGGTCGACCAAA-C-TA---------CGGTT---G---TATTCT---TACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTC---CTATATT---TT-T---ACATATTCT----C--A---TA--TA-CTTCTG---CAC-TG-ACTTTTAT--TTTCTTgtactgacttttattttctt
gi|129681 : AAATCCCCATCCAT---GGGGTCAACCAAA-C---------T-ACGGTT---GTATT---CT---TACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCA--C-CTTTC---CTATATTCTTACAT---AT-T-TTCA----T--A---TACTT--CT-------ACACTA-ACTTT--TAATTTCTT
gi|129682 : TTAAATT-AAGGTTAACCCAT-C-TTGTGGGAT-GTGGTT---G---C---CA---TTCA--ATTGCT-ACAATTGCCGGTCGTGGATGATTGAGAGTCC-CTTTC--ACTGTTTTATCTC-T---GTAT-TTCT----T--C---TG--T--CTCGTA---AAG-TA-ACATCT-T--TTTCTTGTGTTTGAAGAAACCGGTTTGAGTCCAT-------AT----------------------TTT-GGTAAC---TG--GTTATTCTAACACT-------G-----------AC------CTCATTTCAGTATTT-TCTGAT-AAATT-TTCTTTCTTTATcaaatttcttagctaacaatacttgttttatctttccatccttaatgttttcttcatcttgttttcctttataactttactttatttttgttttcctatcttaccttacctcattcttacttttctttcttttcatactatatttttcttatcctttccatccttacttaattcttgttttctttttcgctcttatttcaatct
gi|129683 : T-GAGGTCAACCCAC-C-CA---------CGGTT---G---TATTCT---TACA--ATTGCT--TAATCACCGGTCGTGGAGGATTAAGCG--C-CTTTT--CCTATTTTCT----T---A-CA-TACT----T--A---TA--CTACTGCTG---CTG-TG-ACTTTTAT--TTTCTT
gi|129684 : GGATCATGGTT---GCATT---CT---TACA--ATTGCT--TAATCACCGGTTGTGGAGGATTAAGCG--C-CTTTC---CCATTTTC-CTA-C---ATAT-TTAT----T--A---
gi|129685 : catcgcaca-C-TAGTGGAAT-GTTGTT---G---T---TT---TACA--ATTGCT-ACAATCGCCGGTCGTGGATGATTGAGCG--C-CTTTT--ACTG---TCTCTC-T---GTCT-TTCA----T--A---TG--T--CTAATA---AAG-TA-ACCTCA-T--TATCTTGTGTTTGAACAAACACGCGTGAGTCCAT-------ATTTAC---TGTAGA
gi|129686 : GTGGGAT-GTGGTT---G---T---CT---TACA--GTTGCT-ACAATCACC-----------ACTGGGCG--C-CTTTA--ACTGTCTTTTCTC-T---ATCT-TTCT----T--A---TG--T--CAAATA---ACA-TA-ACTTT-------TCTTGTGTTTGAATAAACCGGTTTGAGTCCAT-------ATTTGA---TATGGATATCA-TA-TTT-GATAAC---TG--TTTTTTAAAACACT-------A------TTAGTACTCCGTTCTGGTTTTTG-ATTTGTCAGCTAAAACT-TTCGTTCTTTACCCTAAAAC-TTTT-TATTCTGTACATTCCAGTATTAGTC-T------TTTCTCTAAATTT-----GCTATCTTTT---ATTCTGGAGTGTGCTTACTCACGTTTTAT------------------------GTACT-TG-CTCC--GCTAC-AAACCGTCCATAT----TTCTTATCTTTCGT-TTGTTTTCGGTACAGTACgttca
gi|129687 : T---G---T---TT---TACA--ATTGCT-ACTTTCACCGGTCGTGGAGGATTTAGCG--CATTTTT--ACTGTCTTCTCTC-T---ATCT-TCTT----TTGA---TG--T--CTAATA---ACA-TA-ACTTTC-T--TTTCTTGTATTTGAATAAATCGTTTTGAGTCCAT-------ATTTAT---TATGGATATCA-TA-TTC-GATAAC---TG--TTTTTTCCAACACT-------A------TAAGTACTCCGTTCTGGTTTCAG-ATTTGTCTGCTAAAACT-TTCGTTCTTCATCCTAAAGCTTTTT-TATTACGTACAATCCCGTATAAGTC-TG-----TTTCTCTAAATTT-----ACTCTCTTTC---ATTCTGGGGTGTGCTTACTCATGTTCTAT------------------------ATACT-TG-CACC--GATACAAAACCGTCCATATTTCGTTCCTATCTTTCGC-TTGTTTTCGGTACAGTAC
gi|129688 : TA---ACA-TA-ACTTTC-T--TTTCATGTGTTTGAATAAACCGGTTTGAGTCCGT-------A--TAACGTTCTGG-TTTCA-GA-TTT-G---AC---TG--
gi|129688 : CGTTCTGGTTTCAG-ATTTGACTGA-AAAACG-TTCGTTCTTCATCTTAAAGC-TTTT-TATTCTGTACATTCCCGTATTAGTC-TG-----TTTCTCTTTATTT-----AATATCTTTC---ATTCTGGAATGTGCTTTCTCATGTTCTTT------------------------TTACT-TG-CTCC--GATA------TTTCCATAT----TTCTGACCTTTCGC-TTGTTTTCGGTGCaaaaacgttcgttcttcatcttaaagctttttattctgtacattcccgtattagtctgtttctctttatttaatatctttcattctggaatgtgctttctcatgttctttttacttgctccgatatttccatatttctgacctttcgcttgttttcggtgc