lowQualScore : 1 666666666666666666666666666666666666666 1111111 2222222222222222 111 11
lowQualScore : 1 7 1 888888 22 3 3 888888888888888888888888888888888888888 66666666 55555 2 0 1 1111111 555 333 555555 5555555555555555 6 2 1 5 1 1 000 1 777 5 3 222 1 555 55 99999999 3 22 33 11 111
lowQualScore : . . . ...... .. . . ....................................... ........ ..... . . . ....... ... ... ...... ................ . . . . . . ... . ... . . ... . ... .. ........ . .. .. .. ...
lowQualScore : 9 0 9 555555 66 1 8 999999999999999999999999999999999999999 99999999 00000 0 2 7 5555555 000 000 000000 3333333333333333 6 6 8 9 7 8 222 8 222 2 1 999 6 222 66 55555555 2 22 11 55 999
consensus : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTAATA-TAC-----T--ATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGTGTAAAC-GN------TAAATGGTAAAN--GATAC---ACGGTAAACGA-----TACACG----------CN----AAACGATTCGAACGCAAACGCAGGCTAAAATGCGTTC-AGTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
Reference ( gi|50338 ) : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-ATTTAATA-TAT-----T--ATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGTGTAAAC-GT------TAAATGGTAAAA--GATAC---ACGGTAAACGA-----TACACG----------CA----AAACGATTCGAACGCAAACACAGGTTAAAATGCATTC-ACTATCGTTT-TGAACTGCAT-TTTC--ATATTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50337 : ATCAATATTTTAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTAATA-TAT-----T--ATCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGTGTAAAC-AT------TAAATGGTAAAA--GATAC---ACGGTAAACGA-----TACACG----------CA----AAACGATTCGAACGCAAACGCAGGTTAAAATGCATTC-ACTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCATG-AAAA-AAATGCAAACCATTAACGAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50340 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTAATA-TAT-----T--ATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGTGTAAAC-GT------TAAATGGTAAAA--GATAC---ACAGTAAACGA-----TACACG----------CT----AAACAATTCGAACGC-----------AAAATGCGTTC-ACTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAA---CTAAAATGCATTT-CAAACGCA---AAA---AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--T---TGGTGTACTCGAACGGATTACGGTCTGTA
gi|50339 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AACTAATA-TAT-----T--ATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGGTGATGCGATTGGTGAACATGTCATGTAAAC-GT------TAAATGGTAAAA--GATAC---ACGGTAAACGA-----TACACA----------CT----AAACGATTCGAACGCAAACGCAGGCTAAAATGCATTC-ACT-TCGTTT-TGAACTGCAT-TTTT--GTATTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAA---CTAAAATGCATAT-CAAACGCA---AAAC--AAAGGCGTTGGA-------CAGGCAAAATG-AATGCAATTGAAATGCATT--T--T---TGGTGTACTTGAACGGATTATGGTCTGTA
gi|50341 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-TATTAATA-TAT-----T--ATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAG-----TTG-GACAACCAGAGATGGTGCGATTGGTGAACATGTCGTGTAAAC-GT------TAAATGGTAAAA--AATAC---ACGGTAAACGA-----TACACA----------CT----AAACGATTCGAATTAAAACGCAGACTAAAATGTGTTC-ACTATTGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAAACATTAACGGAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCGTTTGA-------CACGCAAAACG-AACACAATTGAAATGCATT--T--T---TGGTGTACTTGAGCGGATTACGGTCTGTA
gi|50343 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTAATA-TAT-----T--ATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGTGATTGGTGAACATGTCGTGTAAAC-GT------TAAATGGTAAAA--GATAC---ACGGTAAACGA-----TACATG----------CA----AAACGATTCGAATGCAAACGCAGGTTGAAATGCATTC-ACTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCATAAAAAA-AAATGCAAACCATTAACGAAA---CTAAAATGCATTT-CAAACACA---AAAC--AAACG------------------------------CAAATGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACGATCTGTA
gi|50342 : ATCAATATTTCAGAAAGATGTTAATCAATATT---TTAATTTATTT-AATTAATT-TAT-----T--GTCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGATCATGTCGTGTAAAC-GT------TAAATGGTCAAA--GATAC---ACGCTAAACGA-----TACACG----------CT----AAACGATTCAAATGCAAACGCAGGCTTAAATGCGTTC-ACTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCAT---AAA-AAATGCAAACCATTAACGAAA---CTTAAATGCATTT-TAAACGCA---AAAC--AAACGCGTTTGA-------CACACAAAACG-AACGCAGTTGAAATGCATT--T--T---TGGTGTATTTGAACGGATTATGGTCTGTA
gi|50344 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTAATA-TAT-----T--ATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTAT------------------------------------------------------------GCAA-----TTT-GACAACCAGAGATGATACGATTGGTGAACATGTCGTGTAAAC-GT------TAAAAGGTAAAA--GATAC---ACGCTAAACGA-----AACACG----------CT----AAACGATTCGAACGCAAA------------TGCGTTC-ACTATGGTTT-TGAACTGCAT-TTTC--GTATTT-TGTCTGACGTTTATCAT--AAAAAAAATGCAAACCATTAACAAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCATTTGA-------CACGCAAAACG-AATGCAATTGAAATGCATT--T--T---TGGTGTACTTGAATGGATTACGGTCTGTA
gi|50346 : ATCAATATTTCAGAAAGATTTTAATCAATATTTTTTTAATTTATTT-AATCAATATTAC-----T--ATCATATTACTCCCGGTGATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------AC------------CAAATATTTTGTAATGATCAGAGATGATGCGATTGGTGAA---------TAA----T------TA----CTAACA---ATAC---ACGGTAAATGA-----TACACG----------------GTACGATTCGAACGAAAACGCAGGCTAAAATGTGTTT-AGTATCGTTT-TGA
gi|50345 : ATCAGTATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTGATA-TA--------------------CCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TATAtatcgcctggtgtccgtcgtctgtcgtccatcgt
gi|50347 : CAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTAATA-TAT-----T--ATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTGT------------------------------------------------------------ACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGTGTAAAC-GT------TAAATGGTTAAA--GATAC---ACGCTAAACGA-----TACACG----------CT----AAACGATTCGAACGCAAACGCAGACTAAAATGCGTTC-ACTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCATA-AAAA-AAATTCAAACCATTAACAAAA---CTAAAATGCATTT-CAAATGCA---AAAC--AAATGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50348 : CAATATTTCAAAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTAATA-TA--------------------CCTGGCGGTTTCGTTAAATATATACTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAT-----CTG-GACAATCAGAGAAGATGCAATTGGTGAACACGACGTGTAAAC-GA------TAAATGGTAAAC--TATAC---ACGGTAAATGA-----AACATG----------GT----AAACAATTTGAACACAAACACAGGCTAAAATGCGGTT-AGTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCAT--AAAA-AAATGTAAACCATAAACGAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCATCTGA-------CACGCAAAACA-AGCGCATTTGAAATGTATT--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50350 : CAATCTTTCAGAAAGATTTTAATCAAAATTATTTTAATTTATTT-AATTAATT-TAC-----T--ATCATATAAAACCCGGTGATTTCTTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------AACCAAATTTTTTGTAATTTGTGT--------TACAC-----TTG-GACAACCAGAGATGATGTGATTGATGAACATGCCGTGTAAACAGTAAACGATAAATGGTAAAC--GATAC---ACGGTAAACTA-----TACACGGTGAACGATACATGGCAAACGATACGAACGCAAATGCAGGCTAAAATGCATTA-AGTATCGTTT-TGAACTGTAT-TTTCTAATTTTT-TCTCCAATGTTTATCAT----AA-AAATGCAAAACATGAATGAAA---CTAAAATGCATTT-GAAATGCA---TTAA--AAATAAGCTTGA-------AACGCAAAACA-AA-ACATTTGAAAAGGATT--T--T---TGGTGTACCTGAATGGATTACAGTCTATA
gi|50349 : CAATCTTTCAGAAAGATTTTAATCAATATTATTTTAATTCATTT-AATCAATA-TATATTTAT--ATCATATAACACCCAGTGATTTCGT-AAATATATAGTTCTTACTGTTTATTCTACTGC-------------------AACCAGATATT---------GTGTAATGGATGTACAA-----TTG-GACAACCAGAGATGGTGCGATTGGTGAGCACGCCGTGTAAAC-GA------TAAATTGTAAAC--GATAC---ACGGTAAACGA-----TACACG----------GT----TAACGATTCGAACGCAAACGCAGGTTAAAATGCGTTT-TGTATCGTTT-CGAACTGC-----------ATTT-TCTCCAACGTTTATCAT--ACAA-AAATGTAAACCATCAACGAAA---CTAAAATTCATTT-GAAACGCC---AAAC--AAACGCATTTAA------------------------------AATGCATT--T--T---TGGTGTACTTGAACGGATTACGGTCTAT
gi|50351 : CAATATTTCAGAAAGATTTTAATTAATATTATTTTAATTTATTT-AATTAATA-TAC-----T--ATCATATAAAATGTGGCGATTTCGTTAAATATGTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGC--------TACAT-----TTG-GACAACCAGAGATGATGCAATAGGTGAACACGCCGTGTTAAT-AA------TAAATGGTAAAA--CATAC---ACAGTAAACG---------------------------------ATTCGAATGCAAACGCTGGCTAAAATGCATTT-AGTATTGTTT-TGAACTGCATATTTC--GTATTT-TCTCTAACGTTTATCAC--AAAA-AAATGCAAACCATTAACGAAA---CTAAAATGTGTT-------------AAAC--AAAAGCATTTGA------------------------------AATGCATT--T--C---TGGTGTAGTTGAACGGATTACGGTCTGTA
gi|50352 : CAATCTTTCAGAAAGATTTTACTCAATATTATTTTAATTTATTT-TATCAATA-TAC-----T--ATCATACAGCACCCAGTGATTTCATTAAATATATAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GATAACCAGAGATGATGCAATTGGTGAGCATGCCGTGTAAAA-GA------TAACTGGTGAAAATGATAC---CTGGTAAACGA---------------------------------TTCTAACGCACTCGCAGGCTAAAATGTGTTT-AGTATAGTTT-TTAACTTAAT-TTTC--GCATTT-TCTCCAACGTTTATCAT--AAAA-AAA----AAC-ACGAACGAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCGTTTGA-------CACGCAAAAAA-ATTGTATTTGAAAAGCATT--T--T---TGGTGTACTTGAATGGATTACGGTCTGTA
gi|50353 : CAATCTTTCAGAAAGGTTTTAATCAATATTATTTTAATTTATTT-AATTAATA-TAC-----T--ATCATATAAAACCTGGTGATTTCGCTAAATATAAAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT--------TACAC-----TTG-AACAACCAGAGATGATGCGATTGGTGAATATGCCGTGTAAAC-G-------------GTAAAC--GATAC---ACGGTTAACTA-----T----------------------------------GCAAACGCAGGCTAAAATTTATTT-AATATGGTTT-TGA-CTGCAT-TTTC-----------TCCAACATTTATCAT--AAAAAAAATGCAAACCATGAACGAAA---CTAAAATGCATTT-GAAACGTGTTTA-----AAACGCATTTGA-------AACACAAAACA-AATGCATTTG-AATGCATT--T--T---TGGTGTACTTGAACGGATTATGGTCTGTA
gi|50354 : CAATATATCAGAAAGATTTAAATCAATATTATTTTAATTTATTT-AATTAATA-TAC-----T--ATCATATAAAACCCAACGATTTCGGTAAATATATAGTTCTTACTATGTGTTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCATGTAAAC-AA------TAAATGGTAAAC--GATAC---ACGGT---------------------------------AAACAATTCGAACGCAAACGCAGGCTAAAATGCGTTT-A-----GT------ACTGAAT-ATTT--GTATTT-TCTCTAATGTTTATCAT---AAA-AAATGCAATGCATT-----------TGAAATGCATTT-
gi|50355 : CAATCTTTCAGAAAGATTTTATTAAATATTATTTTAATTTATTT-AATTATTA-TAT-----GCAATCATATAAAACttggtgtacttgaacggattaccgtctgta
gi|50356 : AATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTAATA-TA--------------------CCCAGCAATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGT-------------------G-------------------GTGT--------TGCAA-----TTG-GACAACCAAAGATGATGTGATTGGTGAACACGCCGTGTAAAT-GA------TAAATGGTAAAC--GCTAC---ACGGTAAACAA-----TAAAGG----------TA----AA-CGATTCAAACGCAAATGCAGGCTAGAATGCGGTT-AGTATCATTT-TGAACTGCAT-TTTC--GTTTTT-TCTCTAATGTTTATCAT--AAAA-AAATGCAAACCATAAACGAAA---CTAAAATACATTT-CAAACGCA---AAAC--AAATGCATTT
gi|50357 : ATATCAGAAAGATTTCAATCAATATTATTTTAATTTATTT-AATCAATA-TTC-----T--ATCATA--ACACCCAGTAATTTCGTTAAATATATAGTTCTTACTATTT--TCCACTGCAACCAAATAGTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GACAACTAGAGATGATGCAATTGGTGAGCACGCCATGTAAAC-GA------TAAATGGTAAAC--GGTAT---A-GGTAAAC---------------------------------GATTCGAACGCAAACGCAGGTTAAAATGCATTT-AGTATTGTTT-TGAACTGCAT-TTTC--GCATTT-TATCCAACATTTATCGT---AAA-AAATGCAAACCAT-----AAA---C-AAAATGCATTT-GAAAAGCA----------------TTTG-------------------------AAATG-----CATT--T--T---AGATGTACTTGAACTGATTACGGTCTGTAtcggtgtacttgaacggataacggtctgta
gi|50358 : TTATTTCAATCAATA-TAC-----T--ATCATATAAAACCCGGCGATTTCGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-G-CTACCAGAGATGATGCGATTGGTGAACACGCCATGTAA-----------------GT------GATAC---ACGGTAAACTA-----TACACG----------GT----AAACGATTCAAACGCA------GGCTAAAATGCGTTT-AGTATTGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCAT--AAAA-AAATGCACACCATAAACGAAA---CTAAAATGCATTT-AAACCGCA---AAAC--AAACGTGTTTGA-------CATACAAAACA-AACGCATTTGAAATGCATT--T--T---TGGTGTACTTGAACAGATTACGGTCTGTA
gi|50359 : T--------TATAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGTGTAAAC-GT------TAAATGGTTAAA--GATAC---ACGGTAAACGA-----TACACG----------CA----AAACGATTCGAACGCAATCGCAGGTTAAAATGCATTC-ACTATCGTTT-TGAACTGCAT-TTTC--GTATTT-TCTCTAACGTTTATCAT--ACAA-AAATGCAAACCATTAACGAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCGTTTGA-------CACGCAAAACG-AACGCAACTGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50366 : TGCAAAC-G--------AAACGATAAAC--GATTA---ACGATAAACGA-----TAAACG----------AA----A
gi|50363 : AAAC-GA------TAAATGATAAAC--GAAACGAAACGATAAACGAAACGATACACG----------TA----tttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcgtttgcgtccgtttggtgtacttgaacggattacggtctgta
gi|50365 : tgttgcgAAAC-GA------TAAATGATAAAT--GATAA---ACGATAAACGA------A-ACG----------------AAACGAT--AAACG-AAACcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcatttgcgtccgtttggtgtacttgaacggattacggtctgta
gi|50358 : tgtatcGGTTTAAATGCATTTTAGTTTCGTTTATGGTGTGCAT-TTT-------------------TTTATGAT--AAA------------CGTTAGAGAAAATACGAAAATGCAGTT-CAAA-ACA---ATACT-AAACGCATTTcgtttgcatttttagtccgtttgtatatcatttaaaacgcgtttgatattcgtttcgtttgcgtccatttggtgtacttgaagggattacggtctgta
gi|50362 : ttatttcaatcaatatactatcatataaaacccggcgatttcgttaaatatatagttcttactatttattctactgcagtgttacaattggctaccagagatgatgcgattggtgaacacgccatgtaagtgatacacggtaaactatacacggtaaacgattcaaacgcaggctaTC-AATATTATTT-TAA--------TTTA--GTATTT-TCTCTTACATTTATCAT--AAAAAAAATGCAAACCATTAACGAAA---CTAAAATGCATTT-CAAACGCA---AAAC--AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACGGTCTGTAgcaaaacaaacgtgtttgacatacaaaacaaacgcatttgaaatgcatttttggtgtacttgaacagattacggtctgta
gi|50360 : TT-TAAAATGAAT-TCCT--GCATTTATTTCTAACTTTTATCAT--TTAA-AAAAGCAAACAAT-----AAA---C-AAAA--------CAAA--------AACTGAAATGCGTT------------------ACA-AAC---------ATACTTT--T--T---TGGTGTACTTGAACGATTTACAGCCTGT
gi|50367 : aaatttgtttggtataaAA-AAATGCAAACCATCAATGAAA---CTAAAATACATTT-AAAACGCA---AAAC--AAACACGTTTGA-------CACGCAAAACA-AACGCATTTGAAATGCATT--T--T---TGGTGTACTTGAACATTTTACAGTCTGTA
gi|50357 : t---CTAAAATGCATTT-CAAATGCT---TTTC--AAATGCATTT
gi|50368 : atatcagaaagatttcaatcaatattattttaatttatttaatcaatattctatcataacacccagtaatttcgttaaatatatagttcttactattttccactgcaaccaaatagtttgtaatgggtgtacaattggacaactagagatgatgcaattggtgagcacgccatgtaaacgataaatggtaaacggtataggtaaacgattcgaacgcaaacgcaggttaaaatgcatttagtattgttttgaactgcattttcgcattttatccaacatttatcgtaaaaaatgcaaaccataaacaTGCGTTTGTGAGTGCATT-AAATT-AACCGCGTTTAATAGAGTGCACGCAAACGG-AGCGCGAACGGAGTGCAAT--T--A---TGGGGTACTTGAGCGGTTTAGGGTCTGTAatgtacttgaactgattacggtctgta
gi|50363 : aatactCGTTCAAG------TACACCAAACG-GACGCAAATGAAACGAAT
gi|50369 : tgttgcgtacgtgtatcgtttcgtttatcgtttcgtttcgtttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatCGTTCAAG------TACACCAAACG-GACGCAAACGAAATGAATgattacggtctgta
gi|50354 : atttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatGTTTAT-------CATAAAAAATGCAATGCATTTGAAATGCATT--T--T---TGGTGTACTTGAACGGATTACCGTCTGTAgattacggtctgta
gi|50365 : caatatatcagaaagatttaaatcaatattattttaatttatttaattaatatactatcatataaaacccaacgatttcggtaaatatatagttcttactatgtgttctactgcagtgttacaattggacaaccagagatgatgcgattggtgaacacgccatgtaaacaataaatggtaaacgatacacggtaaacaattcgaacgcaaacgcaggctaaaatgcgtttagtactgaatatttgtattttctctaatACGC-AAACGAAACGAATATCAAACGCGTT--T--TAAATGATATAC--AAACGGACTA
gi|50356 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttatcatttatcatttatcgtttcgtttgcattttAAATGCATT--T--T---CGGTGTACTTGAACGGATAACGGTCTGTAccatttggtgtacttgaagggattacggtctgta
gi|50364 : aatatttcagaaagattttaatcaatattattttaatttatttaattaatatacccagcaattttgttaaatatatagttcttactatttattctactgtggtgttgcaattggacaaccaaagatgatgtgattggtgaacacgccgtgtaaatgataaatggtaaacgctacacggtaaacaataaaggtaaacgattcaaacgcaaatgcaggctagaatgcggttagtatcattttgaactgcattttcgttttttctctaatgtttatcataaaaaaatgcaaaccataaacgaaactaaaatacatttcaaacgcaaaacTGCATCCGT--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50374 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaccgcgtttgatattcgtttcgttTGCGTTCAT--T---TGGTGTACTTGAACTAATTACGGTCTGTA
gi|50373 : aaacgcgtttgatatttgttttgttGCGTT--TGTT---TGGTGTACTAGAACGGATTATGGTCTGTA
gi|50363 : aaacgcgcttgatatttgtcctttg--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50375 : tgttgcgtacgtgtatcgtttcgtttatcgtttcgtttcgtttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcatttgcgtccg--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50370 : --T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50366 : cgtttaaaacgtgttcgatattcgtttcgtttgcgtccg--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50372 : tttcgtttatcgtttatcgttaatcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcgtttgcgtccg--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50369 : aaacgcgtttgatattcgtttcgttagcgtctg--T--T---TGGTGTACTTGAACGGATTACGGTCTGTA
gi|50365 : atttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcatttcgtttgcgtccg--T--T---TGGTGTACTTGAAGGGATTACGGTCTGTA
gi|50361 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttatcatttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcatttaaaacgcgtttgatattcgtttcgtttgcgtcca--T--T---TGGTGTACTTGAACAGATTGCGGTCTGTA
gi|50371 : cgtttatcgtttcgtttatcgtttcatttcgtttcgtttatcgtttcgttaatcgtttcgtatatagtttcgtttgcatttttagtccatttgtatatcgttttaaaacgcgtttgatattcgtttcgtttgcgtccc--T---TGGTGTACTAGAACGGATTACGGTCTGTA
Alignments
lowQualScore : 666666666666666666666666666666666666666 11111111111111
lowQualScore : 1 22 1 44444 1 1 555555555555555555555555555555555555555 66666666 44444 1 1 6666666 3 3 00000000000000 99 22 2 1 333 1 777 5 2 1 11 555 1 5555555 22 0 5 44 11
lowQualScore : . .. . ..... . . ....................................... ........ ..... . . ....... . . .............. .. .. . . ... . ... . . . .. ... . ....... .. . . .. ..
lowQualScore : 8 55 8 55555 0 0 111111111111111111111111111111111111111 66666666 88888 9 1 2222222 9 3 22222222222222 33 44 3 8 222 8 222 2 1 7 88 444 7 2222222 11 8 6 77 55
consensus : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAAC--------------GATACACGCTAAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
Reference ( family-555 ) : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAAC--------------GATACACGCNAAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50337 : ATCAATATTTTAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACATTAAATGGTAAAAGATACACGGTAAAC--------------GATACACGCAAAACGAT--TCGAACGCAAACGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATG-AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50338 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-ATTTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAAC--------------GATACACGCAAAACGAT--TCGAACGCAAACACAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCATA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50339 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AACTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGGTGATGCGATTGGTGAACATGTCAT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAAC--------------GATACACACTAAACGAT--TCGAACGCAAACGCAGGCTAAAATGCATTCACT-TCGTTTTGAACTGCAT-TTTTGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATAT-CAAACGCA---AAAC-AAAGGCGTTGGA-------CAGGCAAAATG-AATGCAATTGAAATGCATT--T--TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50340 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACAGTAAAC--------------GATACACGCTAAACAAT--TCGAACGC-----------AAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAA--AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--TTGGTGTACTCGAACGGATTACGGTCTGTA
gi|50341 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-TATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAG-----TTG-GACAACCAGAGATGGTGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAAATACACGGTAAAC--------------GATACACACTAAACGAT--TCGAATTAAAACGCAGACTAAAATGTGTTCACTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAAACATTAACGGAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACACAATTGAAATGCATT--T--TTGGTGTACTTGAGCGGATTACGGTCTGTA
gi|50342 : ATCAATATTTCAGAAAGATGTTAATCAATATT---TTAATTTATTT-AATTA--ATT-TAT-----TGTCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGATCATGTCGT-------GTAAACGTTAAATGGTCAAAGATACACGCTAAAC--------------GATACACGCTAAACGAT--TCAAATGCAAACGCAGGCTTAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT---AAA-AAATGCAAACCATTAACGAAACTTAAA-TGCATTT-TAAACGCA---AAAC-AAACGCGTTTGA-------CACACAAAACG-AACGCAGTTGAAATGCATT--T--TTGGTGTATTTGAACGGATTATGGTCTGTA
gi|50343 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGTGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAAC--------------GATACATGCAAAACGAT--TCGAATGCAAACGCAGGTTGAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATAAAAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACACA---AAAC-AA------------------ACGCAAA------------TGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGATCTGTA
gi|50344 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTAT------------------------------------------------------------GCAA-----TTT-GACAACCAGAGATGATACGATTGGTGAACATGTCGT-------GTAAACGTTAAAAGGTAAAAGATACACGCTAAAC--------------GAAACACGCTAAACGAT--TCGAACGCAAA------------TGCGTTCACTATGGTTTTGAACTGCAT-TTTCGTA---TTT-TGTCTGACGTTTATCAT--AAAAAAAATGCAAACCATTAACAAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATTTGA-------CACGCAAAACG-AATGCAATTGAAATGCATT--T--TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50345 : ATCAGTATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTG--ATA-TAC------------------CCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TATA
gi|50346 : ATCAATATTTCAGAAAGATTTTAATCAATATTTTTTTAATTTATTT-AATCA--ATATTAC-----TATCATATTACTCCCGGTGATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------AC------------CAAATATTTTGTAATGATCAGAGATGATGCGATTGGTGAA-----------------------TAATTACT-AACAATACACGGTAAAT--------------GATACACGGT--ACGAT--TCGAACGAAAACGCAGGCTAAAATGTGTTTAGTATCGTTTTGA
gi|50347 : CAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTGT------------------------------------------------------------ACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGCTAAAC--------------GATACACGCTAAACGAT--TCGAACGCAAACGCAGACTAAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATA-AAAA-AAATTCAAACCATTAACAAAACTAAAA-TGCATTT-CAAATGCA---AAAC-AAATGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTAtatcgcctggtgtccgtcgtctgtcgtccatcgt
gi|50348 : CAATATTTCAAAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CTGGCGGTTTCGTTAAATATATACTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAT-----CTG-GACAATCAGAGAAGATGCAATTGGTGAACACGACGT-------GTAAACGATAAATGGTAAACTATACACGGTAAAT--------------GAAACATGGTAAACAAT--TTGAACACAAACACAGGCTAAAATGCGGTTAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGTAAACCATAAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATCTGA-------CACGCAAAACA-AGCGCATTTGAAATGTATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50349 : CAATCTTTCAGAAAGATTTTAATCAATATTATTTTAATTCATTT-AATCA--ATA-TATATTTATATCATATAACACCCAGTGATTTCGT-AAATATATAGTTCTTACTGTTTATTCTACTGC-------------------AACCAGATATT---------GTGTAATGGATGTACAA-----TTG-GACAACCAGAGATGGTGCGATTGGTGAGCACGCCGT-------GTAAACGATAAATTGTAAACGATACACGGTAAAC--------------GATACACGGTTAACGAT--TCGAACGCAAACGCAGGTTAAAATGCGTTTTGTATCGTTTCGAACTGC---------A---TTT-TCTCCAACGTTTATCAT--ACAA-AAATGTAAACCATCAACGAAACTAAAA-TTCATTT-GAAACGCC---AAAC-AAACGCAT------------------------------TTAAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTAT
gi|50350 : CAATCTTTCAGAAAGATTTTAATCAAAATTATTTTAATTTATTT-AATTA--ATT-TAC-----TATCATATAAAACCCGGTGATTTCTTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------AACCAAATTTTTTGTAATTTGTGT--------TACAC-----TTG-GACAACCAGAGATGATGTGATTGATGAACATGCCGTGTAAACAGTAAACGATAAATGGTAAACGATACACGGTAAACTATACACGGTGAACGATACATGGCAAACGAT--ACGAACGCAAATGCAGGCTAAAATGCATTAAGTATCGTTTTGAACTGTAT-TTTC-TAATTTTT-TCTCCAATGTTTATCAT----AA-AAATGCAAAACATGAATGAAACTAAAA-TGCATTT-GAAATGCA---TTAA-AAATAAGCTTGA-------AACGCAAAACA-AA-ACATTTGAAAAGGATT--T--TTGGTGTACCTGAATGGATTACAGTCTATA
gi|50351 : CAATATTTCAGAAAGATTTTAATTAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAATGTGGCGATTTCGTTAAATATGTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGC--------TACAT-----TTG-GACAACCAGAGATGATGCAATAGGTGAACACGCCGT-------GTTAATAATAAATGGTAAAACATACACAGTAAAC--------------GAT----------------TCGAATGCAAACGCTGGCTAAAATGCATTTAGTATTGTTTTGAACTGCATATTTCGTA---TTT-TCTCTAACGTTTATCAC--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGTGTT-------------AAAC-AAAAGCAT------------------------------TTGAAATGCATT--T--CTGGTGTAGTTGAACGGATTACGGTCTGTA
gi|50352 : CAATCTTTCAGAAAGATTTTACTCAATATTATTTTAATTTATTT-TATCA--ATA-TAC-----TATCATACAGCACCCAGTGATTTCATTAAATATATAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GATAACCAGAGATGATGCAATTGGTGAGCATGCCGT-------GTAAAAGATAACTGGTGAA------------AAT--------------GATACCTGGTAAACGAT--TCTAACGCACTCGCAGGCTAAAATGTGTTTAGTATAGTTTTTAACTTAAT-TTTCGCA---TTT-TCTCCAACGTTTATCAT--AAAA-AAA----AAC-ACGAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAAAA-ATTGTATTTGAAAAGCATT--T--TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50353 : CAATCTTTCAGAAAGGTTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCTGGTGATTTCGCTAAATATAAAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT--------TACAC-----TTG-AACAACCAGAGATGATGCGATTGGTGAATATGCCGT-------GTAAACG-------GTAAACGATACACGGTTAAC--------------TAT----------------------GCAAACGCAGGCTAAAATTTATTTAATATGGTTTTGA-CTGCAT-TTTC------------TCCAACATTTATCAT--AAAAAAAATGCAAACCATGAACGAAACTAAAA-TGCATTT-GAAACGTGTTTA----AAACGCATTTGA-------AACACAAAACA-AATGCATTTG-AATGCATT--T--TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50354 : CAATATATCAGAAAGATTTAAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCAACGATTTCGGTAAATATATAGTTCTTACTATGTGTTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAAACAATAAATGGTAAACGATACACGGT----------------------------AAACAAT--TCGAACGCAAACGCAGGCTAAAATGCGTTTAGT----------ACTGAAT-ATTTGTA---TTT-TCTCTAATGTTTATCAT---AAA-AAATGCAATGCATT--------TGAAA-TGCATTT-
gi|50354 : GTTTAT-------CATAAAAAATGCAATGCATTTGAAATGCATT--T--TTGGTGTACTTGAACGGATTACCGTCTGTAttggtgtacttgaacggattaccgtctgta
gi|50355 : caatatatcagaaagatttaaatcaatattattttaatttatttaattaatatactatcatataaaacccaacgatttcggtaaatatatagttcttactatgtgttctactgcagtgttacaattggacaaccagagatgatgcgattggtgaacacgccatgtaaacaataaatggtaaacgatacacggtaaacaattcgaacgcaaacgcaggctaaaatgcgtttagtactgaatatttgtattttctctaatCAATCTTTCAGAAAGATTTTATTAAATATTATTTTAATTTATTT-AATTATTATA-TGC-----AATCATATAAAAC
gi|50356 : AATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CCAGCAATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGT-------------------G-------------------GTGT--------TGCAA-----TTG-GACAACCAAAGATGATGTGATTGGTGAACACGCCGT-------GTAAATGATAAATGGTAAACGCTACACGGTAAAC--------------AATAAAGG-TAAACGAT--TCAAACGCAAATGCAGGCTAGAATGCGGTTAGTATCATTTTGAACTGCAT-TTTCGTT---TTT-TCTCTAATGTTTATCAT--AAAA-AAATGCAAACCATAAACGAAACTAAAA-TACATTT-CAAACG---------------------------------CAAAAC------------AAATGCATT--T--TCGGTGTACTTGAACGGATAACGGTCTGTA
gi|50357 : ATATCAGAAAGATTTCAATCAATATTATTTTAATTTATTT-AATCA--ATA-TTC-----TATCATA--ACACCCAGTAATTTCGTTAAATATATAGTTCTTACTATTT--TCCACTGCAACCAAATAGTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GACAACTAGAGATGATGCAATTGGTGAGCACGCCAT-------GTAAACGATAAATGGTAAACGGTATA-GGT----------------------------AAACGAT--TCGAACGCAAACGCAGGTTAAAATGCATTTAGTATTGTTTTGAACTGCAT-TTTCGCA---TTT-TATCCAACATTTATCGT---AAA-AAATGCAAACCAT-----AAAC-AAAA-TGCATTT-GAAAAGCA---------------TTTGA-------------------AATGC-----------ATT--T--TAGATGTACTTGAACTGATTACGGTCTGTA
gi|50358 : TTATTTCAATCA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-G-CTACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAA----------GT----GATACACGGTAAAC--------------TATACACGGTAAACGAT--TC------AAACGCAGGCTAAAATGCGTTTAGTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCACACCATAAACGAAACTAAAA-TGCATTT-AAACCGCA---AAAC-AAACGTGTTTGA-------CATACAAAACA-AACGCATTTGAAATGCATT--T--TTGGTGTACTTGAACAGATTACGGTCTGTA
gi|50359 : T--------TATAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGGTAAAC--------------GATACACGCAAAACGAT--TCGAACGCAATCGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--ACAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAACTGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50360 : AAATTTGTTTGGTATAATTT-AAAATGAAT-TCCTGCA---TTTATTTCTAACTTTTATCAT--TTAA-AAAAGCAAACAATAAACAAAACAAAAACTG----------------------AAATGCGTT------------------ACA-AAC---------ATACTTT--T--TTGGTGTACTTGAACGATTTACAGCCTGT
gi|50361 : --T--TTGGTGTACTTGAACAGATTGCGGTCTGTA
gi|50362 : cgtttatcgtttcgtttatcgtttcatttcgtttcgtttatcgtttcgttaatcgtttcgtatatagtttcgtttgcatttttagtccatttgtatatcgttttaaaacgcgtttgatattcgtttcgtttgcgtcccTCAATATTATTTTAA--------TTTAGTA---TTT-TCTCTTACATTTATCAT--AAAAAAAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAATGCATT--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50363 : AAACGATAAATGATAAACGA-A-ACG--AAAC--------------GATAAACG--AAACGATACACGTACGCAA
gi|50363 : tg--T--TTGGTGTACTTGAACGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcatttgcgtccgtttggtgtacttgaacggattacggtctgta
gi|50364 : tgttgcgtacgtgtatcgtttcgtttatcgtttcgtttcgtttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcatttgcgtccgTGCATCCGT--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50365 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaccgcgtttgatattcgtttcgttAAACGATAAATGATAAATGATAAACGATAAAC--------------GAAA----CGAAACGAT----AAACG-AAACG
gi|50365 : tgtat--T--TTGGTGTACTTGAAGGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcatttaaaacgcgtttgatattcgtttcgtttgcgtccatttggtgtacttgaagggattacggtctgta
gi|50366 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttatcatttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcatttaaaacgcgtttgatattcgtttcgtttgcgtcca--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50367 : tttcgtttatcgtttatcgttaatcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcgtttgcgtccgAA-AAATGCAAACCATCAATGAAACTAAAA-TACATTT-AAAACGCA---AAAC-AAACACGTTTGA-------CACGCAAAACA-AACGCATTTGAAATGCATT--T--TTGGTGTACTTGAACATTTTACAGTCTGTA
gi|50368 : t-TGCGTTTGTGAGTGCATT-AAATTAACCGCGTTTAATAGAGTGCACGCAAACGG-AGCGCGAACGGAGTGCAAT--T--ATGGGGTACTTGAGCGGTTTAGGGTCTGTA
gi|50369 : aatact-AAACGCGTTTGA-------TATTCATTTCG--------TT----TGCGTCCGT--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50370 : atttgcatttttagtccgtttgtatatcgttta--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50371 : cgtttaaaacgtgttcgatattcgtttcgtttgcgtccg--TTGGTGTACTAGAACGGATTACGGTCTGTA
gi|50372 : gaaacgtgtttgatattcgtttcgtttacgttcgc--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50373 : aaacgcgtttgatattcgtttcgttagcgtctgGCGTT--TGTTTGGTGTACTAGAACGGATTATGGTCTGTA
gi|50374 : aaacgcgcttgatatttgtcctttgTGCGTTCAT--TTGGTGTACTTGAACTAATTACGGTCTGTA
gi|50375 : aaacgcgtttgatatttgttttgtt--T--TTGGTGTACTTGAACGGATTACGGTCTGTA
Alignments
lowQualScore : 666666666666666666666666666666666666666 1111111111111111 3333333333333
lowQualScore : 1 22 1 44444 1 1 555555555555555555555555555555555555555 66666666 44444 1 1 6666666 3 3 8888888888888888 22 2 1 333 1 777 5 2 1 11 555 1 5555555 22 2 5555555555 33 8888888888888
lowQualScore : . .. . ..... . . ....................................... ........ ..... . . ....... . . ................ .. . . ... . ... . . . .. ... . ....... .. . .......... .. .............
lowQualScore : 8 55 8 55555 0 0 111111111111111111111111111111111111111 66666666 88888 9 1 2222222 9 3 3333333333333333 44 3 8 222 8 222 2 1 7 88 444 7 4444444 22 4 3333333333 11 2222222222222
consensus : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
Reference ( family-555 ) : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50337 : ATCAATATTTTAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACATTAAATGGTAAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAAACGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATG-AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50338 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-ATTTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAAACACAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCATA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50339 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AACTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGGTGATGCGATTGGTGAACATGTCAT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACACACT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCATTCACT-TCGTTTTGAACTGCAT-TTTTGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATAT-CAAACGCA---AAAC-AAAGGCGTTGGA-------CAGGCAAAATG-AATGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50340 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACAGTAAACGATACACGCT--------------AAACAAT--TCGAACGC-----------AAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAA--AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTCGAACGGATTACGGTCTGTA
gi|50341 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-TATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAG-----TTG-GACAACCAGAGATGGTGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAAATACACGGTAAACGATACACACT--------------AAACGAT--TCGAATTAAAACGCAGACTAAAATGTGTTCACTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAAACATTAACGGAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACACAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAGCGGATTACGGTCTGTA
gi|50342 : ATCAATATTTCAGAAAGATGTTAATCAATATT---TTAATTTATTT-AATTA--ATT-TAT-----TGTCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGATCATGTCGT-------GTAAACGTTAAATGGTCAAAGATACACGCTAAACGATACACGCT--------------AAACGAT--TCAAATGCAAACGCAGGCTTAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT---AAA-AAATGCAAACCATTAACGAAACTTAAA-TGCATTT-TAAACGCA---AAAC-AAACGCGTTTGA-------CACACAAAACG-AACGCAGTTGAAAT----------GCATT--T-------------TTGGTGTATTTGAACGGATTATGGTCTGTA
gi|50343 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGTGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACATGCA--------------AAACGAT--TCGAATGCAAACGCAGGTTGAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATAAAAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACACA---AAAC-AA------------------ACGCAAA------------TGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGATCTGTA
gi|50344 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTAT------------------------------------------------------------GCAA-----TTT-GACAACCAGAGATGATACGATTGGTGAACATGTCGT-------GTAAACGTTAAAAGGTAAAAGATACACGCTAAACGAAACACGCT--------------AAACGAT--TCGAACGCAAA------------TGCGTTCACTATGGTTTTGAACTGCAT-TTTCGTA---TTT-TGTCTGACGTTTATCAT--AAAAAAAATGCAAACCATTAACAAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATTTGA-------CACGCAAAACG-AATGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50345 : ATCAGTATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTG--ATA-TAC------------------CCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TATA
gi|50346 : ATCAATATTTCAGAAAGATTTTAATCAATATTTTTTTAATTTATTT-AATCA--ATATTAC-----TATCATATTACTCCCGGTGATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------AC------------CAAATATTTTGTAATGATCAGAGATGATGCGATTGGTGAA-----------------------TAATTACT-AACAATACACGGTAAATGATACACGGT----------------ACGAT--TCGAACGAAAACGCAGGCTAAAATGTGTTTAGTATCGTTTTGA
gi|50347 : CAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTGT------------------------------------------------------------ACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGCTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGACTAAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATA-AAAA-AAATTCAAACCATTAACAAAACTAAAA-TGCATTT-CAAATGCA---AAAC-AAATGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTAtatcgcctggtgtccgtcgtctgtcgtccatcgt
gi|50348 : CAATATTTCAAAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CTGGCGGTTTCGTTAAATATATACTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAT-----CTG-GACAATCAGAGAAGATGCAATTGGTGAACACGACGT-------GTAAACGATAAATGGTAAACTATACACGGTAAATGAAACATGGT--------------AAACAAT--TTGAACACAAACACAGGCTAAAATGCGGTTAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGTAAACCATAAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATCTGA-------CACGCAAAACA-AGCGCATTTGAAAT----------GTATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50349 : CAATCTTTCAGAAAGATTTTAATCAATATTATTTTAATTCATTT-AATCA--ATA-TATATTTATATCATATAACACCCAGTGATTTCGT-AAATATATAGTTCTTACTGTTTATTCTACTGC-------------------AACCAGATATT---------GTGTAATGGATGTACAA-----TTG-GACAACCAGAGATGGTGCGATTGGTGAGCACGCCGT-------GTAAACGATAAATTGTAAACGATACACGGTAAACGATACACGGT--------------TAACGAT--TCGAACGCAAACGCAGGTTAAAATGCGTTTTGTATCGTTTCGAACTGC---------A---TTT-TCTCCAACGTTTATCAT--ACAA-AAATGTAAACCATCAACGAAACTAAAA-TTCATTT-GAAACGCC---AAAC-A------------------------------AACGCATTTAAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTAT
gi|50350 : CAATCTTTCAGAAAGATTTTAATCAAAATTATTTTAATTTATTT-AATTA--ATT-TAC-----TATCATATAAAACCCGGTGATTTCTTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------AACCAAATTTTTTGTAATTTGTGT--------TACAC-----TTG-GACAACCAGAGATGATGTGATTGATGAACATGCCGTGTAAACAGTAAACGATAAATGGTAAACGATACACGGTAAACTATACACGGTGAACGATACATGGCAAACGAT--ACGAACGCAAATGCAGGCTAAAATGCATTAAGTATCGTTTTGAACTGTAT-TTTC-TAATTTTT-TCTCCAATGTTTATCAT----AA-AAATGCAAAACATGAATGAAACTAAAA-TGCATTT-GAAATGCA---TTAA-AAATAAGCTTGA-------AACGCAAAACA-AA-ACATTTGAAAA----------GGATT--T-------------TTGGTGTACCTGAATGGATTACAGTCTATA
gi|50351 : CAATATTTCAGAAAGATTTTAATTAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAATGTGGCGATTTCGTTAAATATGTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGC--------TACAT-----TTG-GACAACCAGAGATGATGCAATAGGTGAACACGCCGT-------GTTAATAATAAATGGTAAAACATACACAGTAAACGAT------------------------------TCGAATGCAAACGCTGGCTAAAATGCATTTAGTATTGTTTTGAACTGCATATTTCGTA---TTT-TCTCTAACGTTTATCAC--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGTGTT-------------AAAC-AAAAG------------------------------CATTTGAAAT----------GCATT--T-------------CTGGTGTAGTTGAACGGATTACGGTCTGTA
gi|50352 : CAATCTTTCAGAAAGATTTTACTCAATATTATTTTAATTTATTT-TATCA--ATA-TAC-----TATCATACAGCACCCAGTGATTTCATTAAATATATAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GATAACCAGAGATGATGCAATTGGTGAGCATGCCGT-------GTAAAAGATAACTGGTGAA------------AATGATACCTGGT--------------AAACGAT--TCTAACGCACTCGCAGGCTAAAATGTGTTTAGTATAGTTTTTAACTTAAT-TTTCGCA---TTT-TCTCCAACGTTTATCAT--AAAA-AAA----AAC-ACGAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAAAA-ATTGTATTTGAAAA----------GCATT--T-------------TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50353 : CAATCTTTCAGAAAGGTTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCTGGTGATTTCGCTAAATATAAAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT--------TACAC-----TTG-AACAACCAGAGATGATGCGATTGGTGAATATGCCGT-------GTAAACG-------GTAAACGATACACGGTTAACTAT------------------------------------GCAAACGCAGGCTAAAATTTATTTAATATGGTTTTGA-CTGCAT-TTTC------------TCCAACATTTATCAT--AAAAAAAATGCAAACCATGAACGAAACTAAAA-TGCATTT-GAAACGTGTTTA----AAACGCATTTGA-------AACACAAAACA-AATGCATTTG-AAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50354 : CAATATATCAGAAAGATTTAAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCAACGATTTCGGTAAATATATAGTTCTTACTATGTGTTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAAACAATAAATGGTAAACGATACACGG--------------T--------------AAACAAT--TCGAACGCAAACGCAGGCTAAAATGCGTTTAGT----------ACTGAAT-ATTTGTA---TTT-TCTCTAATGTTTATCAT---AAA-AAATGCAATGCATT--------TGAAA-TGCATTT-
gi|50354 : GTTTAT-------CATAAAAAATGCAATGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACCGTCTGTAttggtgtacttgaacggattaccgtctgta
gi|50355 : caatatatcagaaagatttaaatcaatattattttaatttatttaattaatatactatcatataaaacccaacgatttcggtaaatatatagttcttactatgtgttctactgcagtgttacaattggacaaccagagatgatgcgattggtgaacacgccatgtaaacaataaatggtaaacgatacacggtaaacaattcgaacgcaaacgcaggctaaaatgcgtttagtactgaatatttgtattttctctaatCAATCTTTCAGAAAGATTTTATTAAATATTATTTTAATTTATTT-AATTATTATA-TGC-----AATCATATAAAAC
gi|50356 : AATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CCAGCAATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGT-------------------G-------------------GTGT--------TGCAA-----TTG-GACAACCAAAGATGATGTGATTGGTGAACACGCCGT-------GTAAATGATAAATGGTAAACGCTACACGGTAAACAATAAAGG-T--------------AAACGAT--TCAAACGCAAATGCAGGCTAGAATGCGGTTAGTATCATTTTGAACTGCAT-TTTCGTT---TTT-TCTCTAATGTTTATCAT--AAAA-AAATGCAAACCATAAACGAAACTAAAA-TACATTT-CAAACG---------------------------------CAAAAC------------AAAT----------GCATT--T-------------TCGGTGTACTTGAACGGATAACGGTCTGTA
gi|50357 : ATATCAGAAAGATTTCAATCAATATTATTTTAATTTATTT-AATCA--ATA-TTC-----TATCATA--ACACCCAGTAATTTCGTTAAATATATAGTTCTTACTATTT--TCCACTGCAACCAAATAGTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GACAACTAGAGATGATGCAATTGGTGAGCACGCCAT-------GTAAACGATAAATGGTAAACGGTATA-GGTAAA----------------------------CGAT--TCGAACGCAAACGCAGGTTAAAATGCATTTAGTATTGTTTTGAACTGCAT-TTTCGCA---TTT-TATCCAACATTTATCGT---AAA-AAATGCAAACCAT-----AAAC-AAAA-TGCATTT-GAAAAGCA---------------TTTGA-------------------AATGC---------------------ATT--T-------------TAGATGTACTTGAACTGATTACGGTCTGTA
gi|50358 : TTATTTCAATCA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-G-CTACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAA----------GT----GATACACGGTAAACTATACACGGT--------------AAACGAT--TC------AAACGCAGGCTAAAATGCGTTTAGTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCACACCATAAACGAAACTAAAA-TGCATTT-AAACCGCA---AAAC-AAACGTGTTTGA-------CATACAAAACA-AACGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACAGATTACGGTCTGTA
gi|50359 : T--------TATAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAATCGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--ACAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAACTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50360 : AAATTTGTTTGGTATAATTT-AAAATGAAT-TCCTGCA---TTTATTTCTAACTTTTATCAT--TTAA-AAAAGCAAACAATAAACAAAACAAAAACTG----------------------AAATGCGTT------------------ACA-AACATACTT-------------------T--T-------------TTGGTGTACTTGAACGATTTACAGCCTGT
gi|50361 : -AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCCTTTGGTGTACTTGAACAGATTGCGGTCTGTA
gi|50362 : cgtttatcgtttcgtttatcgtttcatttcgtttcgtttatcgtttcgttaatcgtttcgtatatagtttcgtttgcatttttagtccatttgtatatcgttttaaTCAATATTATTTTAA--------TTTAGTA---TTT-TCTCTTACATTTATCAT--AAAAAAAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50363 : AAACGATAAATGATAAACGA-A-ACG--AAACGATAAACG----------------AAACGATACACGTACGCAA
gi|50363 : tg-AACGCGTTTGATAT----------TCGTT--TCATTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcatttgcgtccgtttggtgtacttgaacggattacggtctgta
gi|50364 : tgttgcgtacgtgtatcgtttcgtttatcgtttcgtttcgtttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaT----------GCATCCGT-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50365 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaccgcgtttgatattcgtttcgttAAACGATAAATGATAAATGATAAACGATAAACGA-A-ACG----------------AAACGAT----AAACG-AAACG
gi|50365 : tgtat-AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCATTTGGTGTACTTGAAGGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcatttaaaacgcgtttgatattcgtttcgtttgcgtccatttggtgtacttgaagggattacggtctgta
gi|50366 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttatcatttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcatttaa-AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50367 : tttcgtttatcgtttatcgttaatcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaAA-AAATGCAAACCATCAATGAAACTAAAA-TACATTT-AAAACGCA---AAAC-AAACACGTTTGA-------CACGCAAAACA-AACGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACATTTTACAGTCTGTA
gi|50368 : t-TGCGTTTGTGAGTGCATT-AAATTAACCGCGTTTAATAGAGTGCACGCAAACGG-AGCGCGAACGGAGT----------GCAAT--T-------------ATGGGGTACTTGAGCGGTTTAGGGTCTGTA
gi|50369 : aatact-AACGCGTTTGATAT----------TCATT--TCGTTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50370 : atttgcatttttagtccgtttgtatatcgtttaa--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50371 : cgtttaaaacgtgttcgatattcgtttcgtttgcgtccg-------------TTGGTGTACTAGAACGGATTACGGTCTGTA
gi|50372 : gaaacgtgtttgatattcgtttcgtttacgttcgc-AACGCGTTTGATAT----------TCGTT--TCGTTAGCGTCTGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50373 : a-AACGCGCTTGATATTTGTCCTTTGGCGTT--TGT-----------TTGGTGTACTAGAACGGATTATGGTCTGTA
gi|50374 : aT----------GCGTTCAT-------------TTGGTGTACTTGAACTAATTACGGTCTGTA
gi|50375 : aaacgcgtttgatatttgttttgtt--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
Alignments
lowQualScore : 666666666666666666666666666666666666666 1111111111111111 3333333333333
lowQualScore : 1 22 1 44444 1 1 555555555555555555555555555555555555555 66666666 44444 1 1 6666666 3 3 8888888888888888 22 2 1 333 1 777 5 2 1 11 555 1 5555555 22 2 5555555555 33 8888888888888
lowQualScore : . .. . ..... . . ....................................... ........ ..... . . ....... . . ................ .. . . ... . ... . . . .. ... . ....... .. . .......... .. .............
lowQualScore : 8 55 8 55555 0 0 111111111111111111111111111111111111111 66666666 88888 9 1 2222222 9 3 3333333333333333 44 3 8 222 8 222 2 1 7 88 444 7 4444444 22 4 3333333333 11 2222222222222
consensus : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
Reference ( family-555 ) : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50337 : ATCAATATTTTAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACATTAAATGGTAAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAAACGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATG-AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50338 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-ATTTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAAACACAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCATA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50339 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AACTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGGTGATGCGATTGGTGAACATGTCAT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACACACT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCATTCACT-TCGTTTTGAACTGCAT-TTTTGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATAT-CAAACGCA---AAAC-AAAGGCGTTGGA-------CAGGCAAAATG-AATGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50340 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACAGTAAACGATACACGCT--------------AAACAAT--TCGAACGC-----------AAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAA--AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTCGAACGGATTACGGTCTGTA
gi|50341 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-TATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAG-----TTG-GACAACCAGAGATGGTGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAAATACACGGTAAACGATACACACT--------------AAACGAT--TCGAATTAAAACGCAGACTAAAATGTGTTCACTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAAACATTAACGGAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACACAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAGCGGATTACGGTCTGTA
gi|50342 : ATCAATATTTCAGAAAGATGTTAATCAATATT---TTAATTTATTT-AATTA--ATT-TAT-----TGTCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGATCATGTCGT-------GTAAACGTTAAATGGTCAAAGATACACGCTAAACGATACACGCT--------------AAACGAT--TCAAATGCAAACGCAGGCTTAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT---AAA-AAATGCAAACCATTAACGAAACTTAAA-TGCATTT-TAAACGCA---AAAC-AAACGCGTTTGA-------CACACAAAACG-AACGCAGTTGAAAT----------GCATT--T-------------TTGGTGTATTTGAACGGATTATGGTCTGTA
gi|50343 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGTGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACATGCA--------------AAACGAT--TCGAATGCAAACGCAGGTTGAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATAAAAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACACA---AAAC-AA------------------ACGCAAA------------TGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGATCTGTA
gi|50344 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTAT------------------------------------------------------------GCAA-----TTT-GACAACCAGAGATGATACGATTGGTGAACATGTCGT-------GTAAACGTTAAAAGGTAAAAGATACACGCTAAACGAAACACGCT--------------AAACGAT--TCGAACGCAAA------------TGCGTTCACTATGGTTTTGAACTGCAT-TTTCGTA---TTT-TGTCTGACGTTTATCAT--AAAAAAAATGCAAACCATTAACAAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATTTGA-------CACGCAAAACG-AATGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50345 : ATCAGTATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTG--ATA-TAC------------------CCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TATA
gi|50346 : ATCAATATTTCAGAAAGATTTTAATCAATATTTTTTTAATTTATTT-AATCA--ATATTAC-----TATCATATTACTCCCGGTGATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------AC------------CAAATATTTTGTAATGATCAGAGATGATGCGATTGGTGAA-----------------------TAATTACT-AACAATACACGGTAAATGATACACGGT----------------ACGAT--TCGAACGAAAACGCAGGCTAAAATGTGTTTAGTATCGTTTTGA
gi|50347 : CAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTGT------------------------------------------------------------ACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGCTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGACTAAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATA-AAAA-AAATTCAAACCATTAACAAAACTAAAA-TGCATTT-CAAATGCA---AAAC-AAATGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTAtatcgcctggtgtccgtcgtctgtcgtccatcgt
gi|50348 : CAATATTTCAAAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CTGGCGGTTTCGTTAAATATATACTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAT-----CTG-GACAATCAGAGAAGATGCAATTGGTGAACACGACGT-------GTAAACGATAAATGGTAAACTATACACGGTAAATGAAACATGGT--------------AAACAAT--TTGAACACAAACACAGGCTAAAATGCGGTTAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGTAAACCATAAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATCTGA-------CACGCAAAACA-AGCGCATTTGAAAT----------GTATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50349 : CAATCTTTCAGAAAGATTTTAATCAATATTATTTTAATTCATTT-AATCA--ATA-TATATTTATATCATATAACACCCAGTGATTTCGT-AAATATATAGTTCTTACTGTTTATTCTACTGC-------------------AACCAGATATT---------GTGTAATGGATGTACAA-----TTG-GACAACCAGAGATGGTGCGATTGGTGAGCACGCCGT-------GTAAACGATAAATTGTAAACGATACACGGTAAACGATACACGGT--------------TAACGAT--TCGAACGCAAACGCAGGTTAAAATGCGTTTTGTATCGTTTCGAACTGC---------A---TTT-TCTCCAACGTTTATCAT--ACAA-AAATGTAAACCATCAACGAAACTAAAA-TTCATTT-GAAACGCC---AAAC-A------------------------------AACGCATTTAAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTAT
gi|50350 : CAATCTTTCAGAAAGATTTTAATCAAAATTATTTTAATTTATTT-AATTA--ATT-TAC-----TATCATATAAAACCCGGTGATTTCTTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------AACCAAATTTTTTGTAATTTGTGT--------TACAC-----TTG-GACAACCAGAGATGATGTGATTGATGAACATGCCGTGTAAACAGTAAACGATAAATGGTAAACGATACACGGTAAACTATACACGGTGAACGATACATGGCAAACGAT--ACGAACGCAAATGCAGGCTAAAATGCATTAAGTATCGTTTTGAACTGTAT-TTTC-TAATTTTT-TCTCCAATGTTTATCAT----AA-AAATGCAAAACATGAATGAAACTAAAA-TGCATTT-GAAATGCA---TTAA-AAATAAGCTTGA-------AACGCAAAACA-AA-ACATTTGAAAA----------GGATT--T-------------TTGGTGTACCTGAATGGATTACAGTCTATA
gi|50351 : CAATATTTCAGAAAGATTTTAATTAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAATGTGGCGATTTCGTTAAATATGTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGC--------TACAT-----TTG-GACAACCAGAGATGATGCAATAGGTGAACACGCCGT-------GTTAATAATAAATGGTAAAACATACACAGTAAACGAT------------------------------TCGAATGCAAACGCTGGCTAAAATGCATTTAGTATTGTTTTGAACTGCATATTTCGTA---TTT-TCTCTAACGTTTATCAC--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGTGTT-------------AAAC-AAAAG------------------------------CATTTGAAAT----------GCATT--T-------------CTGGTGTAGTTGAACGGATTACGGTCTGTA
gi|50352 : CAATCTTTCAGAAAGATTTTACTCAATATTATTTTAATTTATTT-TATCA--ATA-TAC-----TATCATACAGCACCCAGTGATTTCATTAAATATATAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GATAACCAGAGATGATGCAATTGGTGAGCATGCCGT-------GTAAAAGATAACTGGTGAA------------AATGATACCTGGT--------------AAACGAT--TCTAACGCACTCGCAGGCTAAAATGTGTTTAGTATAGTTTTTAACTTAAT-TTTCGCA---TTT-TCTCCAACGTTTATCAT--AAAA-AAA----AAC-ACGAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAAAA-ATTGTATTTGAAAA----------GCATT--T-------------TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50353 : CAATCTTTCAGAAAGGTTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCTGGTGATTTCGCTAAATATAAAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT--------TACAC-----TTG-AACAACCAGAGATGATGCGATTGGTGAATATGCCGT-------GTAAACG-------GTAAACGATACACGGTTAACTAT------------------------------------GCAAACGCAGGCTAAAATTTATTTAATATGGTTTTGA-CTGCAT-TTTC------------TCCAACATTTATCAT--AAAAAAAATGCAAACCATGAACGAAACTAAAA-TGCATTT-GAAACGTGTTTA----AAACGCATTTGA-------AACACAAAACA-AATGCATTTG-AAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50354 : CAATATATCAGAAAGATTTAAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCAACGATTTCGGTAAATATATAGTTCTTACTATGTGTTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAAACAATAAATGGTAAACGATACACGG--------------T--------------AAACAAT--TCGAACGCAAACGCAGGCTAAAATGCGTTTAGT----------ACTGAAT-ATTTGTA---TTT-TCTCTAATGTTTATCAT---AAA-AAATGCAATGCATT--------TGAAA-TGCATTT-
gi|50354 : GTTTAT-------CATAAAAAATGCAATGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACCGTCTGTAttggtgtacttgaacggattaccgtctgta
gi|50355 : caatatatcagaaagatttaaatcaatattattttaatttatttaattaatatactatcatataaaacccaacgatttcggtaaatatatagttcttactatgtgttctactgcagtgttacaattggacaaccagagatgatgcgattggtgaacacgccatgtaaacaataaatggtaaacgatacacggtaaacaattcgaacgcaaacgcaggctaaaatgcgtttagtactgaatatttgtattttctctaatCAATCTTTCAGAAAGATTTTATTAAATATTATTTTAATTTATTT-AATTATTATA-TGC-----AATCATATAAAAC
gi|50356 : AATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CCAGCAATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGT-------------------G-------------------GTGT--------TGCAA-----TTG-GACAACCAAAGATGATGTGATTGGTGAACACGCCGT-------GTAAATGATAAATGGTAAACGCTACACGGTAAACAATAAAGG-T--------------AAACGAT--TCAAACGCAAATGCAGGCTAGAATGCGGTTAGTATCATTTTGAACTGCAT-TTTCGTT---TTT-TCTCTAATGTTTATCAT--AAAA-AAATGCAAACCATAAACGAAACTAAAA-TACATTT-CAAACG---------------------------------CAAAAC------------AAAT----------GCATT--T-------------TCGGTGTACTTGAACGGATAACGGTCTGTA
gi|50357 : ATATCAGAAAGATTTCAATCAATATTATTTTAATTTATTT-AATCA--ATA-TTC-----TATCATA--ACACCCAGTAATTTCGTTAAATATATAGTTCTTACTATTT--TCCACTGCAACCAAATAGTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GACAACTAGAGATGATGCAATTGGTGAGCACGCCAT-------GTAAACGATAAATGGTAAACGGTATA-GGTAAA----------------------------CGAT--TCGAACGCAAACGCAGGTTAAAATGCATTTAGTATTGTTTTGAACTGCAT-TTTCGCA---TTT-TATCCAACATTTATCGT---AAA-AAATGCAAACCAT-----AAAC-AAAA-TGCATTT-GAAAAGCA---------------TTTGA-------------------AATGC---------------------ATT--T-------------TAGATGTACTTGAACTGATTACGGTCTGTA
gi|50358 : TTATTTCAATCA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-G-CTACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAA----------GT----GATACACGGTAAACTATACACGGT--------------AAACGAT--TC------AAACGCAGGCTAAAATGCGTTTAGTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCACACCATAAACGAAACTAAAA-TGCATTT-AAACCGCA---AAAC-AAACGTGTTTGA-------CATACAAAACA-AACGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACAGATTACGGTCTGTA
gi|50359 : T--------TATAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAATCGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--ACAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAACTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50360 : AAATTTGTTTGGTATAATTT-AAAATGAAT-TCCTGCA---TTTATTTCTAACTTTTATCAT--TTAA-AAAAGCAAACAATAAACAAAACAAAAACTG----------------------AAATGCGTT------------------ACA-AACATACTT-------------------T--T-------------TTGGTGTACTTGAACGATTTACAGCCTGT
gi|50361 : -AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCCTTTGGTGTACTTGAACAGATTGCGGTCTGTA
gi|50362 : cgtttatcgtttcgtttatcgtttcatttcgtttcgtttatcgtttcgttaatcgtttcgtatatagtttcgtttgcatttttagtccatttgtatatcgttttaaTCAATATTATTTTAA--------TTTAGTA---TTT-TCTCTTACATTTATCAT--AAAAAAAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50363 : AAACGATAAATGATAAACGA-A-ACG--AAACGATAAACG----------------AAACGATACACGTACGCAA
gi|50363 : tg-AACGCGTTTGATAT----------TCGTT--TCATTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcatttgcgtccgtttggtgtacttgaacggattacggtctgta
gi|50364 : tgttgcgtacgtgtatcgtttcgtttatcgtttcgtttcgtttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaT----------GCATCCGT-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50365 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaccgcgtttgatattcgtttcgttAAACGATAAATGATAAATGATAAACGATAAACGA-A-ACG----------------AAACGAT----AAACG-AAACG
gi|50365 : tgtat-AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCATTTGGTGTACTTGAAGGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcatttaaaacgcgtttgatattcgtttcgtttgcgtccatttggtgtacttgaagggattacggtctgta
gi|50366 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttatcatttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcatttaa-AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50367 : tttcgtttatcgtttatcgttaatcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaAA-AAATGCAAACCATCAATGAAACTAAAA-TACATTT-AAAACGCA---AAAC-AAACACGTTTGA-------CACGCAAAACA-AACGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACATTTTACAGTCTGTA
gi|50368 : t-TGCGTTTGTGAGTGCATT-AAATTAACCGCGTTTAATAGAGTGCACGCAAACGG-AGCGCGAACGGAGT----------GCAAT--T-------------ATGGGGTACTTGAGCGGTTTAGGGTCTGTA
gi|50369 : aatact-AACGCGTTTGATAT----------TCATT--TCGTTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50370 : atttgcatttttagtccgtttgtatatcgtttaa--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50371 : cgtttaaaacgtgttcgatattcgtttcgtttgcgtccg-------------TTGGTGTACTAGAACGGATTACGGTCTGTA
gi|50372 : gaaacgtgtttgatattcgtttcgtttacgttcgc-AACGCGTTTGATAT----------TCGTT--TCGTTAGCGTCTGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50373 : a-AACGCGCTTGATATTTGTCCTTTGGCGTT--TGT-----------TTGGTGTACTAGAACGGATTATGGTCTGTA
gi|50374 : aT----------GCGTTCAT-------------TTGGTGTACTTGAACTAATTACGGTCTGTA
gi|50375 : aaacgcgtttgatatttgttttgtt--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
blockSeqs : C TT T ATTTA T C AACCAAATTTTTTGTAATTT AATGGATG ATATT T T GTAAACA T A GTGAACGATACATGGC AC C A ATT A AAA A T C GT TTT T TAGAGTG GC A TTGTCCTTTG CG CGTTTGCGTCCCT
blockSeqs : . . . . T C AACCAAATATTTTGTAATGG . . . T . T A CA . C . . . AA A T . C TT . . G A . CA CATTTGCGTCCGT
blockSeqs : . . . . T C AACCAAATATTTTGTAATGG . . . T . T A CT . C . . . A A T . C . . . G A . . CGTTTGCGTCCAT
blockSeqs : . . . . T C AACCAAATAGTTTGTAATGG . . . T . T A CT . C . . . A . T . C . . . G A . . CGTTTGCGTCCGT
blockSeqs : . . . . T C AACCAGATATT . . . T . T A CT . C . . . A . T . C . . . G G . . CGTTTGCGTCCGT
blockSeqs : . . . . T C G . . . T . T A CT . C . . . A . T . T . . . G A . . CGTTAGCGTCTGT
blockSeqs : . . . . T C G . . . T . T A CA . C . . . A . T . C . . . G A . . GT
blockSeqs : . . . . T C G . . . T . T C CT . G . . . A . T . C . . . G T . . .
blockSeqs : . . . . G A A . . . C . A A GT . C . . . A . A . C . . . A T . . .
blockSeqs : . . . . T C G . . . C . A C CT . G . . . A . C . C . . . A T . . .
blockSeqs : . . . . G A G . . . T . A C GT . G . . . A . G . G . . . A T . . .
blockSeqs : . . . . G A G . . . C . A C GT . G . . . A . T . G . . . A T . . .
blockSeqs : . . . . T A A . . . T . A A GT . G . . . A . G . C . . . A T . . .
blockSeqs : . . . . G G A . . . T . A C GT . G . . . A . G . G . . . G T . . .
blockSeqs : . . . . A A G . . . C . A C CA . A . . . A . T . C . . . A T . . .
blockSeqs : . . . . G A A . . . C . A C T . G . . . T . A . G . . . G A . . .
blockSeqs : . . . . G A G . . . C . T C T . G . . . A . A . A . . . A C . . .
blockSeqs : . . . . G A A . . . C . A A . . G . . . . . T . C . . . G T . . .
blockSeqs : . . . . G A . . . . T . A C . . G . . . . . A . C . . . . A . . .
blockSeqs : . . . . G A . . . . . . . T . . C . . . . . T . A . . . . T . . .
blockSeqs : . . . . . . . . . G . . . . . C . . . . . . T . . .
blockSeqs : . . . . A . . . . . . . . T . . .
blockSeqs : . . . T . . .
blockSeqs : A . . .
blockSeqs : T . . .
blockSeqs : T . . .
blockSeqs : C . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : .
blockSeqCons : A**
originalCons : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
finalCons : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATA--AAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
Alignments
lowQualScore : 666666666666666666666666666666666666666 1111111111111111 3333333333333
lowQualScore : 1 22 1 44444 1 1 555555555555555555555555555555555555555 66666666 44444 1 1 6666666 3 3 8888888888888888 22 2 1 333 1 777 5 2 1 11 555 1 5555555 22 2 5555555555 33 8888888888888
lowQualScore : . .. . ..... . . ....................................... ........ ..... . . ....... . . ................ .. . . ... . ... . . . .. ... . ....... .. . .......... .. .............
lowQualScore : 8 55 8 55555 0 0 111111111111111111111111111111111111111 66666666 88888 9 1 2222222 9 3 3333333333333333 44 3 8 222 8 222 2 1 7 88 444 7 4444444 22 4 3333333333 11 2222222222222
consensus : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
Reference ( family-555 ) : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCNTTAAATATNTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCGT-------GTAAACGNTAAATGGTAAANGATACACGGTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCGTTCAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCANTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50337 : ATCAATATTTTAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACATTAAATGGTAAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAAACGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATG-AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50338 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-ATTTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAAACACAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCATA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50339 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AACTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGGTGATGCGATTGGTGAACATGTCAT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACACACT--------------AAACGAT--TCGAACGCAAACGCAGGCTAAAATGCATTCACT-TCGTTTTGAACTGCAT-TTTTGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATAT-CAAACGCA---AAAC-AAAGGCGTTGGA-------CAGGCAAAATG-AATGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50340 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACAGTAAACGATACACGCT--------------AAACAAT--TCGAACGC-----------AAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAA--AAACGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTCGAACGGATTACGGTCTGTA
gi|50341 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-TATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAG-----TTG-GACAACCAGAGATGGTGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAAATACACGGTAAACGATACACACT--------------AAACGAT--TCGAATTAAAACGCAGACTAAAATGTGTTCACTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCAAAACATTAACGGAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACACAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAGCGGATTACGGTCTGTA
gi|50342 : ATCAATATTTCAGAAAGATGTTAATCAATATT---TTAATTTATTT-AATTA--ATT-TAT-----TGTCATATAAAACCCGGCAATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGATCATGTCGT-------GTAAACGTTAAATGGTCAAAGATACACGCTAAACGATACACGCT--------------AAACGAT--TCAAATGCAAACGCAGGCTTAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT---AAA-AAATGCAAACCATTAACGAAACTTAAA-TGCATTT-TAAACGCA---AAAC-AAACGCGTTTGA-------CACACAAAACG-AACGCAGTTGAAAT----------GCATT--T-------------TTGGTGTATTTGAACGGATTATGGTCTGTA
gi|50343 : ATCAATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGTGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTAAAAGATACACGGTAAACGATACATGCA--------------AAACGAT--TCGAATGCAAACGCAGGTTGAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATAAAAAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACACA---AAAC-AA------------------ACGCAAA------------TGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGATCTGTA
gi|50344 : ATCAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTAT------------------------------------------------------------GCAA-----TTT-GACAACCAGAGATGATACGATTGGTGAACATGTCGT-------GTAAACGTTAAAAGGTAAAAGATACACGCTAAACGAAACACGCT--------------AAACGAT--TCGAACGCAAA------------TGCGTTCACTATGGTTTTGAACTGCAT-TTTCGTA---TTT-TGTCTGACGTTTATCAT--AAAAAAAATGCAAACCATTAACAAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATTTGA-------CACGCAAAACG-AATGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50345 : ATCAGTATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTG--ATA-TAC------------------CCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTATTCTACTGC-------------------G-------------------GTGT--------TATA
gi|50346 : ATCAATATTTCAGAAAGATTTTAATCAATATTTTTTTAATTTATTT-AATCA--ATATTAC-----TATCATATTACTCCCGGTGATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------AC------------CAAATATTTTGTAATGATCAGAGATGATGCGATTGGTGAA-----------------------TAATTACT-AACAATACACGGTAAATGATACACGGT----------------ACGAT--TCGAACGAAAACGCAGGCTAAAATGTGTTTAGTATCGTTTTGA
gi|50347 : CAATATTTCAGAAAGATTTTAATCAATAATAATTTAATTTATTT-AATTA--ATA-TAT-----TATCATATAAAACCCGGCGATTTCTTTAAATATCTAGTTCTTATTATTTGT------------------------------------------------------------ACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGCTAAACGATACACGCT--------------AAACGAT--TCGAACGCAAACGCAGACTAAAATGCGTTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCATA-AAAA-AAATTCAAACCATTAACAAAACTAAAA-TGCATTT-CAAATGCA---AAAC-AAATGCGTTTGA-------CACGCAAAACG-AACGCAATTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTAtatcgcctggtgtccgtcgtctgtcgtccatcgt
gi|50348 : CAATATTTCAAAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CTGGCGGTTTCGTTAAATATATACTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAT-----CTG-GACAATCAGAGAAGATGCAATTGGTGAACACGACGT-------GTAAACGATAAATGGTAAACTATACACGGTAAATGAAACATGGT--------------AAACAAT--TTGAACACAAACACAGGCTAAAATGCGGTTAGTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGTAAACCATAAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCATCTGA-------CACGCAAAACA-AGCGCATTTGAAAT----------GTATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50349 : CAATCTTTCAGAAAGATTTTAATCAATATTATTTTAATTCATTT-AATCA--ATA-TATATTTATATCATATAACACCCAGTGATTTCGT-AAATATATAGTTCTTACTGTTTATTCTACTGC-------------------AACCAGATATT---------GTGTAATGGATGTACAA-----TTG-GACAACCAGAGATGGTGCGATTGGTGAGCACGCCGT-------GTAAACGATAAATTGTAAACGATACACGGTAAACGATACACGGT--------------TAACGAT--TCGAACGCAAACGCAGGTTAAAATGCGTTTTGTATCGTTTCGAACTGC---------A---TTT-TCTCCAACGTTTATCAT--ACAA-AAATGTAAACCATCAACGAAACTAAAA-TTCATTT-GAAACGCC---AAAC-A------------------------------AACGCATTTAAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTAT
gi|50350 : CAATCTTTCAGAAAGATTTTAATCAAAATTATTTTAATTTATTT-AATTA--ATT-TAC-----TATCATATAAAACCCGGTGATTTCTTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------AACCAAATTTTTTGTAATTTGTGT--------TACAC-----TTG-GACAACCAGAGATGATGTGATTGATGAACATGCCGTGTAAACAGTAAACGATAAATGGTAAACGATACACGGTAAACTATACACGGTGAACGATACATGGCAAACGAT--ACGAACGCAAATGCAGGCTAAAATGCATTAAGTATCGTTTTGAACTGTAT-TTTC-TAATTTTT-TCTCCAATGTTTATCAT----AA-AAATGCAAAACATGAATGAAACTAAAA-TGCATTT-GAAATGCA---TTAA-AAATAAGCTTGA-------AACGCAAAACA-AA-ACATTTGAAAA----------GGATT--T-------------TTGGTGTACCTGAATGGATTACAGTCTATA
gi|50351 : CAATATTTCAGAAAGATTTTAATTAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAATGTGGCGATTTCGTTAAATATGTAGTTCTTACTATTTATTCTACTGC-------------------G-------------------GTGC--------TACAT-----TTG-GACAACCAGAGATGATGCAATAGGTGAACACGCCGT-------GTTAATAATAAATGGTAAAACATACACAGTAAACGAT------------------------------TCGAATGCAAACGCTGGCTAAAATGCATTTAGTATTGTTTTGAACTGCATATTTCGTA---TTT-TCTCTAACGTTTATCAC--AAAA-AAATGCAAACCATTAACGAAACTAAAA-TGTGTT-------------AAAC-AAAAG------------------------------CATTTGAAAT----------GCATT--T-------------CTGGTGTAGTTGAACGGATTACGGTCTGTA
gi|50352 : CAATCTTTCAGAAAGATTTTACTCAATATTATTTTAATTTATTT-TATCA--ATA-TAC-----TATCATACAGCACCCAGTGATTTCATTAAATATATAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GATAACCAGAGATGATGCAATTGGTGAGCATGCCGT-------GTAAAAGATAACTGGTGAA------------AATGATACCTGGT--------------AAACGAT--TCTAACGCACTCGCAGGCTAAAATGTGTTTAGTATAGTTTTTAACTTAAT-TTTCGCA---TTT-TCTCCAACGTTTATCAT--AAAA-AAA----AAC-ACGAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAAAA-ATTGTATTTGAAAA----------GCATT--T-------------TTGGTGTACTTGAATGGATTACGGTCTGTA
gi|50353 : CAATCTTTCAGAAAGGTTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCTGGTGATTTCGCTAAATATAAAGTTCTTACTATTTATTCTACTGCAACCAAATATTTTGTAATGG-------------------GTGT--------TACAC-----TTG-AACAACCAGAGATGATGCGATTGGTGAATATGCCGT-------GTAAACG-------GTAAACGATACACGGTTAACTAT------------------------------------GCAAACGCAGGCTAAAATTTATTTAATATGGTTTTGA-CTGCAT-TTTC------------TCCAACATTTATCAT--AAAAAAAATGCAAACCATGAACGAAACTAAAA-TGCATTT-GAAACGTGTTTA----AAACGCATTTGA-------AACACAAAACA-AATGCATTTG-AAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTATGGTCTGTA
gi|50354 : CAATATATCAGAAAGATTTAAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC-----TATCATATAAAACCCAACGATTTCGGTAAATATATAGTTCTTACTATGTGTTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAAACAATAAATGGTAAACGATACACGG--------------T--------------AAACAAT--TCGAACGCAAACGCAGGCTAAAATGCGTTTAGT----------ACTGAAT-ATTTGTA---TTT-TCTCTAATGTTTATCAT---AAA-AAATGCAATGCATT--------TGAAA-TGCATTT-
gi|50354 : GTTTAT-------CATAAAAAATGCAATGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACCGTCTGTAttggtgtacttgaacggattaccgtctgta
gi|50355 : caatatatcagaaagatttaaatcaatattattttaatttatttaattaatatactatcatataaaacccaacgatttcggtaaatatatagttcttactatgtgttctactgcagtgttacaattggacaaccagagatgatgcgattggtgaacacgccatgtaaacaataaatggtaaacgatacacggtaaacaattcgaacgcaaacgcaggctaaaatgcgtttagtactgaatatttgtattttctctaatCAATCTTTCAGAAAGATTTTATTAAATATTATTTTAATTTATTT-AATTATTATA-TGC-----AATCATATAAAAC
gi|50356 : AATATTTCAGAAAGATTTTAATCAATATTATTTTAATTTATTT-AATTA--ATA-TAC------------------CCAGCAATTTTGTTAAATATATAGTTCTTACTATTTATTCTACTGT-------------------G-------------------GTGT--------TGCAA-----TTG-GACAACCAAAGATGATGTGATTGGTGAACACGCCGT-------GTAAATGATAAATGGTAAACGCTACACGGTAAACAATAAAGG-T--------------AAACGAT--TCAAACGCAAATGCAGGCTAGAATGCGGTTAGTATCATTTTGAACTGCAT-TTTCGTT---TTT-TCTCTAATGTTTATCAT--AAAA-AAATGCAAACCATAAACGAAACTAAAA-TACATTT-CAAACG---------------------------------CAAAAC------------AAAT----------GCATT--T-------------TCGGTGTACTTGAACGGATAACGGTCTGTA
gi|50357 : ATATCAGAAAGATTTCAATCAATATTATTTTAATTTATTT-AATCA--ATA-TTC-----TATCATA--ACACCCAGTAATTTCGTTAAATATATAGTTCTTACTATTT--TCCACTGCAACCAAATAGTTTGTAATGG-------------------GTGT---------ACAA-----TTG-GACAACTAGAGATGATGCAATTGGTGAGCACGCCAT-------GTAAACGATAAATGGTAAACGGTATA-GGTAAA----------------------------CGAT--TCGAACGCAAACGCAGGTTAAAATGCATTTAGTATTGTTTTGAACTGCAT-TTTCGCA---TTT-TATCCAACATTTATCGT---AAA-AAATGCAAACCAT-----AAAC-AAAA-TGCATTT-GAAAAGCA---------------TTTGA-------------------AATGC---------------------ATT--T-------------TAGATGTACTTGAACTGATTACGGTCTGTA
gi|50358 : TTATTTCAATCA--ATA-TAC-----TATCATATAAAACCCGGCGATTTCGTTAAATATATAGTTCTTACTATTTATTCTACTGC-------------------A-------------------GTGT--------TACAA-----TTG-G-CTACCAGAGATGATGCGATTGGTGAACACGCCAT-------GTAA----------GT----GATACACGGTAAACTATACACGGT--------------AAACGAT--TC------AAACGCAGGCTAAAATGCGTTTAGTATTGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--AAAA-AAATGCACACCATAAACGAAACTAAAA-TGCATTT-AAACCGCA---AAAC-AAACGTGTTTGA-------CATACAAAACA-AACGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACAGATTACGGTCTGTA
gi|50359 : T--------TATAA-----TTG-GACAACCAGAGATGATGCGATTGGTGAACATGTCGT-------GTAAACGTTAAATGGTTAAAGATACACGGTAAACGATACACGCA--------------AAACGAT--TCGAACGCAATCGCAGGTTAAAATGCATTCACTATCGTTTTGAACTGCAT-TTTCGTA---TTT-TCTCTAACGTTTATCAT--ACAA-AAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAACTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50360 : AAATTTGTTTGGTATAATTT-AAAATGAAT-TCCTGCA---TTTATTTCTAACTTTTATCAT--TTAA-AAAAGCAAACAATAAACAAAACAAAAACTG----------------------AAATGCGTT------------------ACA-AACATACTT-------------------T--T-------------TTGGTGTACTTGAACGATTTACAGCCTGT
gi|50361 : -AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCCTTTGGTGTACTTGAACAGATTGCGGTCTGTA
gi|50362 : cgtttatcgtttcgtttatcgtttcatttcgtttcgtttatcgtttcgttaatcgtttcgtatatagtttcgtttgcatttttagtccatttgtatatcgttttaaTCAATATTATTTTAA--------TTTAGTA---TTT-TCTCTTACATTTATCAT--AAAAAAAATGCAAACCATTAACGAAACTAAAA-TGCATTT-CAAACGCA---AAAC-AAACGCGTTTGA-------CACGCAAAACG-AACGCAAATGAAAT----------GCATT--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50363 : AAACGATAAATGATAAACGA-A-ACG--AAACGATAAACG----------------AAACGATACACGTACGCAA
gi|50363 : tg-AACGCGTTTGATAT----------TCGTT--TCATTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcgtttaaaacgcgtttgatattcgtttcatttgcgtccgtttggtgtacttgaacggattacggtctgta
gi|50364 : tgttgcgtacgtgtatcgtttcgtttatcgtttcgtttcgtttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaT----------GCATCCGT-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50365 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaaccgcgtttgatattcgtttcgttAAACGATAAATGATAAATGATAAACGATAAACGA-A-ACG----------------AAACGAT----AAACG-AAACG
gi|50365 : tgtat-AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCATTTGGTGTACTTGAAGGGATTACGGTCTGTAcgtttgcatttttagtccgtttgtatatcatttaaaacgcgtttgatattcgtttcgtttgcgtccatttggtgtacttgaagggattacggtctgta
gi|50366 : tgtatcgtttcgtttatcgtttcgtttcgtttatcgtttatcatttatcatttatcgtttcgtttgcatttttagtccgtttgtatatcatttaa-AACGCGTTTGATAT----------TCGTT--TCGTTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50367 : tttcgtttatcgtttatcgttaatcgtttatcgtttcgtttgcatttttagtccgtttgtatatcgtttaaAA-AAATGCAAACCATCAATGAAACTAAAA-TACATTT-AAAACGCA---AAAC-AAACACGTTTGA-------CACGCAAAACA-AACGCATTTGAAAT----------GCATT--T-------------TTGGTGTACTTGAACATTTTACAGTCTGTA
gi|50368 : t-TGCGTTTGTGAGTGCATT-AAATTAACCGCGTTTAATAGAGTGCACGCAAACGG-AGCGCGAACGGAGT----------GCAAT--T-------------ATGGGGTACTTGAGCGGTTTAGGGTCTGTA
gi|50369 : aatact-AACGCGTTTGATAT----------TCATT--TCGTTTGCGTCCGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50370 : atttgcatttttagtccgtttgtatatcgtttaa--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50371 : cgtttaaaacgtgttcgatattcgtttcgtttgcgtccg-------------TTGGTGTACTAGAACGGATTACGGTCTGTA
gi|50372 : gaaacgtgtttgatattcgtttcgtttacgttcgc-AACGCGTTTGATAT----------TCGTT--TCGTTAGCGTCTGTTTGGTGTACTTGAACGGATTACGGTCTGTA
gi|50373 : a-AACGCGCTTGATATTTGTCCTTTGGCGTT--TGT-----------TTGGTGTACTAGAACGGATTATGGTCTGTA
gi|50374 : aT----------GCGTTCAT-------------TTGGTGTACTTGAACTAATTACGGTCTGTA
gi|50375 : aaacgcgtttgatatttgttttgtt--T-------------TTGGTGTACTTGAACGGATTACGGTCTGTA