lowQualScore : 0 2 2 1 00 00 9999 1 11 9 1 2 6
lowQualScore : . . . . .. .. .... . .. . . . .
lowQualScore : 4 0 8 1 66 66 7777 1 66 1 1 6 6
consensus : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGAT-A--CA-T--G-A-CNTTGTGTCT
Reference ( gi|114635 ) : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGAT-A--TA-T--G-A-CATTGTGTCT
gi|114778 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGAT-A--TA-T--G-A-CATTGTGTCT
gi|114694 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCTGGTAA--CAGTCTCTGTGAC--GATTGAT-A--TA-T--G-A-CATTGTGTCT
gi|114689 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGAT-A--TA-C--A-A-CATTGTGTCT
gi|114696 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CTCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGAT-A--TA-T--G-A-CATTGTGTCT
gi|114737 : TCAATCCAGGGG-TAGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGAT-A--TA-T--G-A-CATTGTGTCT
gi|114675 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGAT-A--TA-G--G-A-CATTGTGTCT
gi|114651 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCTGGCAA--CAGTCTCGGTGAT--GATTGAT-A--TA-T--G-A-CATTGTGTCT
gi|114692 : TCAATCCAGGGG-TCATAAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGAT-A--TA-C--A-A-CATTGTGTCT
gi|114643 : TCAATCCAGAGG-TCGTGAGTTCGAAT-CCCC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGAT-A--TA-T--G-A-CATTGTGTCT
gi|114791 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGAT-A--TA-T--G-A-CATTGT
gi|114687 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCCTGCCTGGCAA--CAGTCTCCGTGAT--GATTGAT-A--TA-T--G-A-CTTTGTGTCTt
gi|114804 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-TCCTGGCAA--CAGTATCTGTGAT--GATTGAT-A--TG-C--G-A-CATTGTGTCT
gi|114768 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCG-ACTCGGCAA--CAGTCTCTGTGAT--GATTAAT-A--TA-T--G-A-AATTGTG
gi|114733 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-ACCCTGCAA--CAGTCTCTGTGAT--GATTAGT-A--TA-C--A-A-CATTGTGTCT
gi|114638 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGTCA--CGCTCTCTGTGAT--GATTGAT-A--TA-C--A-A-CTTTGTGTCT
gi|114789 : TCAATCCAGGTG-TCTCGAGTTTGAAT-CCCC-ACCCGGCGA--CAGTCTCTGTGAT--GATTGAC-A--TA-C--A-A-CATTGTGTCT
gi|114725 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCTGACAA--CAGTCTCAATGAT--GATTGAT-A--TG-C--G-A-CATTGTGTCT
gi|114703 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGAT-A--
gi|114702 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGAT-A--aac
gi|114827 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GTCTGGCAG--CAGTCTCCATGAT--GATTGAT----TA-TTCA-A-CATTGTATCTaac
gi|114823 : TCAATTCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGAT-A--
gi|114664 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114654 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114747 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114744 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114708 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114644 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114749 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGACAA--CAGTCTCCGTGAT--GATTG
gi|114822 : TCAATCCAGGGG-TCGTGCGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114831 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCCTGCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114830 : TCAATCCAGGGG-TCGTGAGTTTGAATCCCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114661 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114799 : TCAATCCAGGGG-TCGTGAATTCGAAT-CCCC-GCCCGGCAA--CAATCTCTGTGAT--GATTG
gi|114670 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCCGTGAT--GATTGg
gi|114616 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114841 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114628 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCTC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGAT-A--
gi|114715 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCCCGCCTGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114710 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCGGCAA--AAGTCTCCGTGAT--GATTG
gi|114705 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCCCACCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114724 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCAA--CAGTCTCAGTGAT--GATTG
gi|114738 : TCAATCCAGGGG-TCGTGAGTTCAGAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114755 : TCAATCCAGGGA-TCGTGAGTTCAAGT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114754 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGTAA--CAGTCTCCGTGAT--GATTG
gi|114676 : TCAATCCAGGGA-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114604 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CTCC-GCCTGGCAA--CAGTCTTTGTGAT--GATTG
gi|114630 : TCAATCCAGGGG-TCATGAGTTCAAAT-CCCC-ACCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114760 : TCAATTCAGGGG-TCATGAGTTTGAAT-CCCC-ACCCGGCAA--CAGTCTCTATGAT--GATTG
gi|114701 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCCGGCAA--CAGTCTCAGTGAT--GATTG
gi|114839 : TCAATCCAGGGG-TCGTGAGTTTGGAT-CCCC-ACCCAGCAA--CAGTCTCCGTGAT--GATT
gi|114826 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114855 : TCAATCTAGGGG-TCGTGAGTTCAAAT-CCCCCGCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114850 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCTGCAA--CAATCTCTGTGAC--GATTG
gi|114845 : TCAATCCAGGGG-TCATGAGCTTGAAT-CCCCCGCCTGGCAA--CAGTCTCTGTGAT--GATTG
gi|114640 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-ACCCGGCAA--CACTCTCTGTGAT--GATTG
gi|114730 : TCAATCCAGGGG-TTGTGAGTTCAAAT-CCCC-ACTCCGCCA--CAGTCTCCGTGAT--GATTGAT-A--CACT--A-A-CATTTTG
gi|114683 : TCAATTCAGGGG-TCGTGAGTTCAAAT-CCCT-ACCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114784 : TCAATCCAGGGG-TCACGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTCCGTGAT--GATTG
gi|114783 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTTCGTGAT--GGTTG
gi|114807 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CCTC-GCCCGGCCA--CAGTCTCCATGAT--GATTG
gi|114721 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114707 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCCCACCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114745 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCT-GCCCAGTCA--CAGTCTCTGTGAT--GATTG
gi|114758 : TCAATCAAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCTA--CAGTCTCCGTGAT--GATTG
gi|114698 : TCAATCCAGGGG-TCGTGAGTTAAAAT-CCCC-TCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114843 : TCAATCCAGGGG-TCGTGAGTTCAAATCCCCC-GTCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114610 : TCAATTCAGGGG-TCGTGAGTTTGAAT-CCCT-GCCCAACCA--TAGTCTCTGTGAT--GATTG
gi|114772 : TCAATCCAGGGG-TCGTAAGTTTGAAT-ACCC-GCCCGGCCA--CAGTCTCTGTGAC--GAATGgccattacctttg
gi|114750 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCATGGCCA--CAGTCTCCATGAT--GGTTGcatgttcaggaactttg
gi|114679 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCA-ATCTGGCCA--CAGTCTCTGTGAT--GACTG
gi|114598 : TTAATCCAGGAG-TCGTGAGTATGAAT-CCCC-GTCTGACCA--CAGTTTCTGTGAT--GATTGGC----CA-T--A-A-CTTTGT-TCT
gi|114759 : TCAATCCAGGGG-TCTTGAGTTTGAAT-CCCC-ACCTGGCCA--CAGTCTTCATGAT--GACTG
gi|114603 : TCAATCC-GGGG-TCTTGGGTTTGATT-CCCA-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT----CA-T--G-A--ACTGTG
gi|114813 : TCAATCCAGGGG-TTGTGAGTTCGAAT-CCCC-ATCTGGCCA--CAATTTCTGTGAT--GGTTGtct
gi|114795 : TCAATCAAGGGG-TTGTGAGTTTAAAT-CCCC-ATCGGACCA--CAGTCTCTGTGAT--GATT
gi|114613 : TCAATCAAGGGG-TTATGAGTTTGAAT-CGCC-ACCCTGCCA--CAGTCTTTATGAT--GATTGGT-
gi|114798 : TCAATCCAGAGG-TCAAGGGTTTGAA--CCCA-GCCCAGCCA--CAATCTCTGTGAT--GATTGGT----CA-T--G-A-caggaactttgttct
gi|114600 : TCAATCTAGGGG-TCTGGAGTTCGAAT-CCCC-ACCCGGACA--CAGTTTCTATGAT--GATTGactctgt
gi|114623 : TCAATCCAGGGG-TCATGAGTTTAACT-CCCC-GCCTGGCCA--CATTCTCAATGAT--GAATGGTCA--T--T--A-A-CTTTGgccatgaactttattct
gi|114719 : TCGATCCAGGGC-ACATGAGTTTAAAT-CCCT-GCCCAGCCA--AAGTCTCTGTGAT--GAT
gi|114685 : TCAATC-AAGGG-TTGTGAGTTTGATT-CTTC-GCCTGGTTA--CAGTCTCTGTGAT--GA---AT-AGCCA-T--G-AGCTTTGT-TCTaaccatgaactttgtt
gi|114735 : TCAATCAGGGGG-ACTCGAGTCTGAAT-CCCT-ACCTGGTCA--CAGCCTCTGTGAT--GATTGGT----CA-T--G-A-
gi|114656 : TCAATCCAGGGG-TTGTGTATTTGAAT-CCCC-ACCTGTTCA--CAATCTCTGTGATCAAATTGatgttattct
gi|114621 : TTAATTCAGGG--TCATGAGTTTGAAT-CCCT-GCCTGGCCA---AATATCTATGAT--GATTGGC----CA-T--GAA-CTTTGT-TCTgccacaatctttgttc
gi|114765 : TCAAACCTGTGG-TTTTGAGTTTGAAT-CCTC-GCCGGGTCA--GAGTTTCTGTGAT--GATTGGC----CA-T--GAA-CCTTGT-TCT
gi|114816 : TCAAACCAGGAG-TAGTCAGCTCAAAT-CCCC-ACCCAGTCA--CTGTCTCTGCGGT--GATCGG--A--CA-T--GAA-CTTTGT-TCT
gi|114684 : TCAATCCAGGGGTTCATGATTTCAATT-TCCC-AACAGGCCA--CAGTTTCTATGAC--AATTGGT----CA-T--GAA-CTTTGT-TCT
gi|115253 : CAATCCAGGGG-TCGTGAGTTTGAATCCCCC-GCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|115243 : CAATCCAGGGG-TTGTGAGTTTGAAT-CCTG-GCCAGGTGA--CAGTCTCTGTGAT--GATTG
gi|115241 : CAATCCAGAGG-TTGTGAGTTCAAAC-ACCC-CACCGACCA--CAGTCTCTGTGAT--GAGTGAC----CA-T--GAA-CTTTGT-TCTgccatgcactt
gi|115242 : CAGTCCAGGGG-TTGTGAGTCTAAAT-CTCC-ACCTGGCCA--CAGTCTCTTAAAT--GGTTGCT----CA-T--GAA-CTTTGT-TCT
gi|115279 : AATCCAGGGG-CCATGAGTTTGAAT-CCCC-ACCTGGACA--CTGTCTCTGTGAT--GACTGAT-A--TA-T--G-A-ACTTGTG
gi|115284 : AATCCAGGGG-TCGTGAGTTTGAAT-CTCC-ACTTGGCCA--CAGTCTCAATGAT--GATTG
gi|115275 : AATTCAGGGG-TCACAAGTTTGACC-CCCC-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT----CA-T--G-A-CCTT-TG
gi|115285 : AATCCAGAGG-TCACGAGTTCTAAT-CCTC-ATCCAGCCA--CAGTCTCTGCGAT--GATTtct
gi|115277 : AATCCAGGGG-TCTTGGCTTTAAAT-CTCC-ACCTGGC----CAGTCTATGTGAT--AATTGGT----CA-T--GAA-CTTTGT-TCTtgccatgcacttttgttc
gi|115314 : TCCAGGTG-TCGTGAGTCTGAAT-CCTC-ACCTGGCCA--CAGTCTCTTTGAT--GGTT
gi|115317 : TCCAGAGG-TCGTGAGTTTGAAT-CACT-GCCCG--AATTCAGCCTCTCTGAT--GATTGGC----CA-T--GAA-CTTTGT-TCTagccatgaactttgttct
gi|115315 : TCCAGGGG-TTGTAAAATTGAAG-CCAC-ACCCAGTCA--CAGTCTCTGTGAT--GATT
Alignments
lowQualScore : 111 1
lowQualScore : 0 2 2 0 00 0 00 333 1 11 3 0 1 9
lowQualScore : . . . . .. . .. ... . .. . . . .
lowQualScore : 4 0 8 9 55 3 55 444 8 22 6 9 0 9
consensus : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
Reference ( family-51 ) : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
gi|114598 : TTAATCCAGGAG-TCGTGAGTATGAAT-CCCC-GTCTGACCA--CAGTTTCTGTGAT--GATTGGC---CA-T--A-A-CTTTGT-TCT
gi|114600 : TCAATCTAGGGG-TCTGGAGTTCGAAT-CCCC-ACCCGGACA--CAGTTTCTATGAT--GATTGGC---CA-T--GAA-CTTTAT-TCT
gi|114603 : TCAATCC-GGGG-TCTTGGGTTTGATT-CCCA-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT---CA-T--G-A--ACTGTG
gi|114604 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CTCC-GCCTGGCAA--CAGTCTTTGTGAT--GATTGtct
gi|114610 : TCAATTCAGGGG-TCGTGAGTTTGAAT-CCCT-GCCCAACCA--TAGTCTCTGTGAT--GATTGGC---CA-T--T-A-CCTT
gi|114613 : TCAATCAAGGGG-TTATGAGTTTGAAT-CGCC-ACCCTGCCA--CAGTCTTTATGAT--GATTGGT---CA-G--GAA-CTTTGT-TCTtg
gi|114616 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114621 : TTAATTCAGGG--TCATGAGTTTGAAT-CCCT-GCCTGGCCA---AATATCTATGAT--GATTGGC---CA-T--GAA-CTTTGT-TCT
gi|114623 : TCAATCCAGGGG-TCATGAGTTTAACT-CCCC-GCCTGGCCA--CATTCTCAATGAT--GAATGGT---CATT--A-A-CTTTG
gi|114628 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCTC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGATA--
gi|114630 : TCAATCCAGGGG-TCATGAGTTCAAAT-CCCC-ACCCGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114635 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114638 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGTCA--CGCTCTCTGTGAT--GATTGATA--TA-C--A-A-CTTTGTGTCT
gi|114640 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-ACCCGGCAA--CACTCTCTGTGAT--GATTG
gi|114643 : TCAATCCAGAGG-TCGTGAGTTCGAAT-CCCC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114644 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114651 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCTGGCAA--CAGTCTCGGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114654 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114656 : TCAATCCAGGGG-TTGTGTATTTGAAT-CCCC-ACCTGTTCA--CAATCTCTGTGATCAAATTG
gi|114661 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGgccacaatctttgttc
gi|114664 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114670 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114675 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-G--G-A-CATTGTGTCT
gi|114676 : TCAATCCAGGGA-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114679 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCA-ATCTGGCCA--CAGTCTCTGTGAT--GACTG
gi|114683 : TCAATTCAGGGG-TCGTGAGTTCAAAT-CCCT-ACCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114684 : TCAATCCAGGGGTTCATGATTTCAATT-TCCC-AACAGGCCA--CAGTTTCTATGAC--AATTGGT---CA-T--GAA-CTTTGT-TCT
gi|114685 : TCAATC-AAGGG-TTGTGAGTTTGATT-CTTC-GCCTGGTTA--CAGTCTCTGTGAT--GA---ATAGCCA-T--G-AGCTTTGT-TCT
gi|114687 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCCTGCCTGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CTTTGTGTCT
gi|114689 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-C--A-A-CATTGTGTCT
gi|114692 : TCAATCCAGGGG-TCATAAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-C--A-A-CATTGTGTCT
gi|114694 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCTGGTAA--CAGTCTCTGTGAC--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114696 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CTCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114698 : TCAATCCAGGGG-TCGTGAGTTAAAAT-CCCC-TCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114701 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCCGGCAA--CAGTCTCAGTGAT--GATTG
gi|114702 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--
gi|114703 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--aac
gi|114705 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCCGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114707 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCCCACCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114708 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114710 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCGGCAA--AAGTCTCCGTGAT--GATTG
gi|114715 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTG
gi|114719 : TCGATCCAGGGC-ACATGAGTTTAAAT-CCCT-GCCCAGCCA--AAGTCTCTGTGAT--GAT--AAC--CA-T--GAA-CTTTGT
gi|114721 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTGt
gi|114724 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCAA--CAGTCTCAGTGAT--GATTG
gi|114725 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCTGACAA--CAGTCTCAATGAT--GATTGATA--TG-C--G-A-CATTGTGTCT
gi|114730 : TCAATCCAGGGG-TTGTGAGTTCAAAT-CCCC-ACTCCGCCA--CAGTCTCCGTGAT--GATTGATA--CACT--A-A-CATTTTG
gi|114733 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-ACCCTGCAA--CAGTCTCTGTGAT--GATTAGTA--TA-C--A-A-CATTGTGTCT
gi|114735 : TCAATCAGGGGG-ACTCGAGTCTGAAT-CCCT-ACCTGGTCA--CAGCCTCTGTGAT--GATTGGT---CA-T--G-A-
gi|114737 : TCAATCCAGGGG-TAGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCTatgttattct
gi|114738 : TCAATCCAGGGG-TCGTGAGTTCAGAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114744 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114745 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCT-GCCCAGTCA--CAGTCTCTGTGAT--GATTG
gi|114747 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114749 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGACAA--CAGTCTCCGTGAT--GATTG
gi|114750 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCATGGCCA--CAGTCTCCATGAT--GGTTG
gi|114754 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGTAA--CAGTCTCCGTGAT--GATTG
gi|114755 : TCAATCCAGGGA-TCGTGAGTTCAAGT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114758 : TCAATCAAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCTA--CAGTCTCCGTGAT--GATTG
gi|114759 : TCAATCCAGGGG-TCTTGAGTTTGAAT-CCCC-ACCTGGCCA--CAGTCTTCATGAT--GACTG
gi|114760 : TCAATTCAGGGG-TCATGAGTTTGAAT-CCCC-ACCCGGCAA--CAGTCTCTATGAT--GATTG
gi|114765 : TCAAACCTGTGG-TTTTGAGTTTGAAT-CCTC-GCCGGGTCA--GAGTTTCTGTGAT--GATTGGC---CA-T--GAA-CCTTGT-TCT
gi|114768 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCG-ACTCGGCAA--CAGTCTCTGTGAT--GATTAATA--TA-T--G-A-AATTGTG
gi|114772 : TCAATCCAGGGG-TCGTAAGTTTGAAT-ACCC-GCCCGGCCA--CAGTCTCTGTGAC--GA---ATG--CA-T--G-
gi|114778 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCTttcaggaactttg
gi|114783 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTTCGTGAT--GGTTG
gi|114784 : TCAATCCAGGGG-TCACGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTCCGTGAT--GATTG
gi|114789 : TCAATCCAGGTG-TCTCGAGTTTGAAT-CCCC-ACCCGGCGA--CAGTCTCTGTGAT--GATTGACA--TA-C--A-A-CATTGTGTCT
gi|114791 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGT
gi|114795 : TCAATCAAGGGG-TTGTGAGTTTAAAT-CCCC-ATCGGACCA--CAGTCTCTGTGAT--GATTt
gi|114798 : TCAATCCAGAGG-TCAAGGGTTTGAA--CCCA-GCCCAGCCA--CAATCTCTGTGAT--GATTGGT---CA-T--GAA-CTCTGT
gi|114799 : TCAATCCAGGGG-TCGTGAATTCGAAT-CCCC-GCCCGGCAA--CAATCTCTGTGAT--GATTG
gi|114804 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-TCCTGGCAA--CAGTATCTGTGAT--GATTGATA--TG-C--G-A-CATTGTGTCTg
gi|114807 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CCTC-GCCCGGCCA--CAGTCTCCATGAT--GATTG
gi|114813 : TCAATCCAGGGG-TTGTGAGTTCGAAT-CCCC-ATCTGGCCA--CAATTTCTGTGAT--GGTTG
gi|114816 : TCAAACCAGGAG-TAGTCAGCTCAAAT-CCCC-ACCCAGTCA--CTGTCTCTGCGGT--GATCGG-A--CA-T--GAA-CTTTGT-TCT
gi|114822 : TCAATCCAGGGG-TCGTGCGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114823 : TCAATTCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--
gi|114826 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCCGGCAA--CAGTCTCCGTGAT--GATTGaac
gi|114827 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GTCTGGCAG--CAGTCTCCATGAT--GATTGAT---TA-TTCA-A-CATTGTATCT
gi|114830 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCCCGCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114831 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCCTGCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114839 : TCAATCCAGGGG-TCGTGAGTTTGGAT-CCCC-ACCCAGCAA--CAGTCTCCGTGAT--GATT
gi|114841 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114843 : TCAATCCAGGGG-TCGTGAGTTCAAATCCCCC-GTCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114845 : TCAATCCAGGGG-TCATGAGCTTGAAT-CCCCCGCCTGGCAA--CAGTCTCTGTGAT--GATTG
gi|114850 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCTGCAA--CAATCTCTGTGAC--GATTG
gi|114855 : TCAATCTAGGGG-TCGTGAGTTCAAAT-CCCCCGCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|115241 : CAATCCAGAGG-TTGTGAGTTCAAAC-ACCC-CACCGACCA--CAGTCTCTGTGAT--GAGTGAC---CA-T--GAA-CTTTGT-TCT
gi|115242 : CAGTCCAGGGG-TTGTGAGTCTAAAT-CTCC-ACCTGGCCA--CAGTCTCTTAAAT--GGTTGCT---CA-T--GAA-CTTTGT-TCT
gi|115243 : CAATCCAGGGG-TTGTGAGTTTGAAT-CCTG-GCCAGGTGA--CAGTCTCTGTGAT--GATTGGC---CA-T--GCA-CTT
gi|115253 : CAATCCAGGGG-TCGTGAGTTTGAAT-CCCCCGCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|115275 : AATTCAGGGG-TCACAAGTTTGACC-CCCC-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT---CA-T--G-A-CCTT-TG
gi|115277 : AATCCAGGGG-TCTTGGCTTTAAAT-CTCC-ACCTGGC----CAGTCTATGTGAT--AATTGGT---CA-T--GAA-CTTTGT-TCTtct
gi|115279 : AATCCAGGGG-CCATGAGTTTGAAT-CCCC-ACCTGGACA--CTGTCTCTGTGAT--GACTGATA--TA-T--G-A-ACTTGTG
gi|115284 : AATCCAGGGG-TCGTGAGTTTGAAT-CTCC-ACTTGGCCA--CAGTCTCAATGAT--GATTG
gi|115285 : AATCCAGAGG-TCACGAGTTCTAAT-CCTC-ATCCAGCCA--CAGTCTCTGCGAT--GATT
gi|115314 : TCCAGGTG-TCGTGAGTCTGAAT-CCTC-ACCTGGCCA--CAGTCTCTTTGAT--GGTTAGC---CA-T--GAA-CTTTGT-TCTtgccatgcacttttgttc
gi|115315 : TCCAGGGG-TTGTAAAATTGAAG-CCAC-ACCCAGTCA--CAGTCTCTGTGAT--GATTAGC---CA-T--GAA-CTTTGT-TCT
gi|115317 : TCCAGAGG-TCGTGAGTTTGAAT-CACT-GCCCG--AATTCAGCCTCTCTGAT--GATTGGC---CA-T--GAA-CTTTGT-TCT
Alignments
lowQualScore : 111 1
lowQualScore : 0 2 2 0 00 0 00 333 1 11 3 0 1 9
lowQualScore : . . . . .. . .. ... . .. . . . .
lowQualScore : 4 0 8 9 55 3 55 444 8 22 6 9 0 9
consensus : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
Reference ( family-51 ) : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
gi|114598 : TTAATCCAGGAG-TCGTGAGTATGAAT-CCCC-GTCTGACCA--CAGTTTCTGTGAT--GATTGGC---CA-T--A-A-CTTTGT-TCT
gi|114600 : TCAATCTAGGGG-TCTGGAGTTCGAAT-CCCC-ACCCGGACA--CAGTTTCTATGAT--GATTGGC---CA-T--GAA-CTTTAT-TCT
gi|114603 : TCAATCC-GGGG-TCTTGGGTTTGATT-CCCA-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT---CA-T--G-A--ACTGTG
gi|114604 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CTCC-GCCTGGCAA--CAGTCTTTGTGAT--GATTGtct
gi|114610 : TCAATTCAGGGG-TCGTGAGTTTGAAT-CCCT-GCCCAACCA--TAGTCTCTGTGAT--GATTGGC---CA-T--T-A-CCTT
gi|114613 : TCAATCAAGGGG-TTATGAGTTTGAAT-CGCC-ACCCTGCCA--CAGTCTTTATGAT--GATTGGT---CA-G--GAA-CTTTGT-TCTtg
gi|114616 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114621 : TTAATTCAGGG--TCATGAGTTTGAAT-CCCT-GCCTGGCCA---AATATCTATGAT--GATTGGC---CA-T--GAA-CTTTGT-TCT
gi|114623 : TCAATCCAGGGG-TCATGAGTTTAACT-CCCC-GCCTGGCCA--CATTCTCAATGAT--GAATGGT---CATT--A-A-CTTTG
gi|114628 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCTC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGATA--
gi|114630 : TCAATCCAGGGG-TCATGAGTTCAAAT-CCCC-ACCCGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114635 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114638 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGTCA--CGCTCTCTGTGAT--GATTGATA--TA-C--A-A-CTTTGTGTCT
gi|114640 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-ACCCGGCAA--CACTCTCTGTGAT--GATTG
gi|114643 : TCAATCCAGAGG-TCGTGAGTTCGAAT-CCCC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114644 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114651 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCTGGCAA--CAGTCTCGGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114654 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114656 : TCAATCCAGGGG-TTGTGTATTTGAAT-CCCC-ACCTGTTCA--CAATCTCTGTGATCAAATTG
gi|114661 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGgccacaatctttgttc
gi|114664 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114670 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114675 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-G--G-A-CATTGTGTCT
gi|114676 : TCAATCCAGGGA-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114679 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCA-ATCTGGCCA--CAGTCTCTGTGAT--GACTG
gi|114683 : TCAATTCAGGGG-TCGTGAGTTCAAAT-CCCT-ACCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114684 : TCAATCCAGGGGTTCATGATTTCAATT-TCCC-AACAGGCCA--CAGTTTCTATGAC--AATTGGT---CA-T--GAA-CTTTGT-TCT
gi|114685 : TCAATC-AAGGG-TTGTGAGTTTGATT-CTTC-GCCTGGTTA--CAGTCTCTGTGAT--GA---ATAGCCA-T--G-AGCTTTGT-TCT
gi|114687 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCCTGCCTGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CTTTGTGTCT
gi|114689 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-C--A-A-CATTGTGTCT
gi|114692 : TCAATCCAGGGG-TCATAAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-C--A-A-CATTGTGTCT
gi|114694 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCTGGTAA--CAGTCTCTGTGAC--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114696 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CTCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114698 : TCAATCCAGGGG-TCGTGAGTTAAAAT-CCCC-TCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114701 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCCGGCAA--CAGTCTCAGTGAT--GATTG
gi|114702 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--
gi|114703 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--aac
gi|114705 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCCGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114707 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCCCACCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114708 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114710 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCGGCAA--AAGTCTCCGTGAT--GATTG
gi|114715 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTG
gi|114719 : TCGATCCAGGGC-ACATGAGTTTAAAT-CCCT-GCCCAGCCA--AAGTCTCTGTGAT--GAT--AAC--CA-T--GAA-CTTTGT
gi|114721 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTGt
gi|114724 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCAA--CAGTCTCAGTGAT--GATTG
gi|114725 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCTGACAA--CAGTCTCAATGAT--GATTGATA--TG-C--G-A-CATTGTGTCT
gi|114730 : TCAATCCAGGGG-TTGTGAGTTCAAAT-CCCC-ACTCCGCCA--CAGTCTCCGTGAT--GATTGATA--CACT--A-A-CATTTTG
gi|114733 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-ACCCTGCAA--CAGTCTCTGTGAT--GATTAGTA--TA-C--A-A-CATTGTGTCT
gi|114735 : TCAATCAGGGGG-ACTCGAGTCTGAAT-CCCT-ACCTGGTCA--CAGCCTCTGTGAT--GATTGGT---CA-T--G-A-
gi|114737 : TCAATCCAGGGG-TAGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCTatgttattct
gi|114738 : TCAATCCAGGGG-TCGTGAGTTCAGAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114744 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114745 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCT-GCCCAGTCA--CAGTCTCTGTGAT--GATTG
gi|114747 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114749 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGACAA--CAGTCTCCGTGAT--GATTG
gi|114750 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCATGGCCA--CAGTCTCCATGAT--GGTTG
gi|114754 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGTAA--CAGTCTCCGTGAT--GATTG
gi|114755 : TCAATCCAGGGA-TCGTGAGTTCAAGT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114758 : TCAATCAAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCTA--CAGTCTCCGTGAT--GATTG
gi|114759 : TCAATCCAGGGG-TCTTGAGTTTGAAT-CCCC-ACCTGGCCA--CAGTCTTCATGAT--GACTG
gi|114760 : TCAATTCAGGGG-TCATGAGTTTGAAT-CCCC-ACCCGGCAA--CAGTCTCTATGAT--GATTG
gi|114765 : TCAAACCTGTGG-TTTTGAGTTTGAAT-CCTC-GCCGGGTCA--GAGTTTCTGTGAT--GATTGGC---CA-T--GAA-CCTTGT-TCT
gi|114768 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCG-ACTCGGCAA--CAGTCTCTGTGAT--GATTAATA--TA-T--G-A-AATTGTG
gi|114772 : TCAATCCAGGGG-TCGTAAGTTTGAAT-ACCC-GCCCGGCCA--CAGTCTCTGTGAC--GA---ATG--CA-T--G-
gi|114778 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCTttcaggaactttg
gi|114783 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTTCGTGAT--GGTTG
gi|114784 : TCAATCCAGGGG-TCACGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTCCGTGAT--GATTG
gi|114789 : TCAATCCAGGTG-TCTCGAGTTTGAAT-CCCC-ACCCGGCGA--CAGTCTCTGTGAT--GATTGACA--TA-C--A-A-CATTGTGTCT
gi|114791 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGT
gi|114795 : TCAATCAAGGGG-TTGTGAGTTTAAAT-CCCC-ATCGGACCA--CAGTCTCTGTGAT--GATTt
gi|114798 : TCAATCCAGAGG-TCAAGGGTTTGAA--CCCA-GCCCAGCCA--CAATCTCTGTGAT--GATTGGT---CA-T--GAA-CTCTGT
gi|114799 : TCAATCCAGGGG-TCGTGAATTCGAAT-CCCC-GCCCGGCAA--CAATCTCTGTGAT--GATTG
gi|114804 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-TCCTGGCAA--CAGTATCTGTGAT--GATTGATA--TG-C--G-A-CATTGTGTCTg
gi|114807 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CCTC-GCCCGGCCA--CAGTCTCCATGAT--GATTG
gi|114813 : TCAATCCAGGGG-TTGTGAGTTCGAAT-CCCC-ATCTGGCCA--CAATTTCTGTGAT--GGTTG
gi|114816 : TCAAACCAGGAG-TAGTCAGCTCAAAT-CCCC-ACCCAGTCA--CTGTCTCTGCGGT--GATCGG-A--CA-T--GAA-CTTTGT-TCT
gi|114822 : TCAATCCAGGGG-TCGTGCGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114823 : TCAATTCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--
gi|114826 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCCGGCAA--CAGTCTCCGTGAT--GATTGaac
gi|114827 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GTCTGGCAG--CAGTCTCCATGAT--GATTGAT---TA-TTCA-A-CATTGTATCT
gi|114830 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCCCGCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114831 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCCTGCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114839 : TCAATCCAGGGG-TCGTGAGTTTGGAT-CCCC-ACCCAGCAA--CAGTCTCCGTGAT--GATT
gi|114841 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114843 : TCAATCCAGGGG-TCGTGAGTTCAAATCCCCC-GTCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114845 : TCAATCCAGGGG-TCATGAGCTTGAAT-CCCCCGCCTGGCAA--CAGTCTCTGTGAT--GATTG
gi|114850 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCTGCAA--CAATCTCTGTGAC--GATTG
gi|114855 : TCAATCTAGGGG-TCGTGAGTTCAAAT-CCCCCGCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|115241 : CAATCCAGAGG-TTGTGAGTTCAAAC-ACCC-CACCGACCA--CAGTCTCTGTGAT--GAGTGAC---CA-T--GAA-CTTTGT-TCT
gi|115242 : CAGTCCAGGGG-TTGTGAGTCTAAAT-CTCC-ACCTGGCCA--CAGTCTCTTAAAT--GGTTGCT---CA-T--GAA-CTTTGT-TCT
gi|115243 : CAATCCAGGGG-TTGTGAGTTTGAAT-CCTG-GCCAGGTGA--CAGTCTCTGTGAT--GATTGGC---CA-T--GCA-CTT
gi|115253 : CAATCCAGGGG-TCGTGAGTTTGAAT-CCCCCGCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|115275 : AATTCAGGGG-TCACAAGTTTGACC-CCCC-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT---CA-T--G-A-CCTT-TG
gi|115277 : AATCCAGGGG-TCTTGGCTTTAAAT-CTCC-ACCTGGC----CAGTCTATGTGAT--AATTGGT---CA-T--GAA-CTTTGT-TCTtct
gi|115279 : AATCCAGGGG-CCATGAGTTTGAAT-CCCC-ACCTGGACA--CTGTCTCTGTGAT--GACTGATA--TA-T--G-A-ACTTGTG
gi|115284 : AATCCAGGGG-TCGTGAGTTTGAAT-CTCC-ACTTGGCCA--CAGTCTCAATGAT--GATTG
gi|115285 : AATCCAGAGG-TCACGAGTTCTAAT-CCTC-ATCCAGCCA--CAGTCTCTGCGAT--GATT
gi|115314 : TCCAGGTG-TCGTGAGTCTGAAT-CCTC-ACCTGGCCA--CAGTCTCTTTGAT--GGTTAGC---CA-T--GAA-CTTTGT-TCTtgccatgcacttttgttc
gi|115315 : TCCAGGGG-TTGTAAAATTGAAG-CCAC-ACCCAGTCA--CAGTCTCTGTGAT--GATTAGC---CA-T--GAA-CTTTGT-TCT
gi|115317 : TCCAGAGG-TCGTGAGTTTGAAT-CACT-GCCCG--AATTCAGCCTCTCTGAT--GATTGGC---CA-T--GAA-CTTTGT-TCT
blockSeqs : C T AGC T TC A T G
blockSeqs : C C A C . A A G
blockSeqs : C C A . . A C G
blockSeqs : C T A . . A T G
blockSeqs : C C A . . A T G
blockSeqs : . C A . . A T G
blockSeqs : . C A . . A A G
blockSeqs : . . A . . A T G
blockSeqs : . . A . . A A G
blockSeqs : . . A . . A A G
blockSeqs : . . A . . C A G
blockSeqs : . . A . . A T G
blockSeqs : . . A . . A T G
blockSeqs : . . A . . A T G
blockSeqs : . . C . . A A G
blockSeqs : . . A . . . A G
blockSeqs : . . A . . . A G
blockSeqs : . . A . . . A G
blockSeqs : . . A . . . T G
blockSeqs : . . A . . . A A
blockSeqs : . . G . . . A G
blockSeqs : . . A . . . A G
blockSeqs : . . A . . . A .
blockSeqs : . . A . . . C .
blockSeqs : . . A . . . A .
blockSeqs : . . A . . . A .
blockSeqs : . . A . . . A .
blockSeqs : . . A . . . A .
blockSeqs : . . . . . . T .
blockSeqs : . . . . . . A .
blockSeqs : . . . . . . T .
blockSeqs : . . . . . . A .
blockSeqs : . . . . . . T .
blockSeqs : . . . . . . T .
blockSeqs : . . . . . . T .
blockSeqs : . . . . . . C
blockSeqs : . . . . . . T
blockSeqs : . . . . . . C
blockSeqs : . . . . . . T
blockSeqs : . . . . . . T
blockSeqs : . . . . . . T
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blockSeqCons : A**
originalCons : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
finalCons : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
Alignments
lowQualScore : 111 1
lowQualScore : 0 2 2 0 00 0 00 333 1 11 3 0 1 9
lowQualScore : . . . . .. . .. ... . .. . . . .
lowQualScore : 4 0 8 9 55 3 55 444 8 22 6 9 0 9
consensus : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
Reference ( family-51 ) : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--CA-T--G-A-CNTTGTGTCT
gi|114598 : TTAATCCAGGAG-TCGTGAGTATGAAT-CCCC-GTCTGACCA--CAGTTTCTGTGAT--GATTGGC---CA-T--A-A-CTTTGT-TCT
gi|114600 : TCAATCTAGGGG-TCTGGAGTTCGAAT-CCCC-ACCCGGACA--CAGTTTCTATGAT--GATTGGC---CA-T--GAA-CTTTAT-TCT
gi|114603 : TCAATCC-GGGG-TCTTGGGTTTGATT-CCCA-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT---CA-T--G-A--ACTGTG
gi|114604 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CTCC-GCCTGGCAA--CAGTCTTTGTGAT--GATTGtct
gi|114610 : TCAATTCAGGGG-TCGTGAGTTTGAAT-CCCT-GCCCAACCA--TAGTCTCTGTGAT--GATTGGC---CA-T--T-A-CCTT
gi|114613 : TCAATCAAGGGG-TTATGAGTTTGAAT-CGCC-ACCCTGCCA--CAGTCTTTATGAT--GATTGGT---CA-G--GAA-CTTTGT-TCTtg
gi|114616 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114621 : TTAATTCAGGG--TCATGAGTTTGAAT-CCCT-GCCTGGCCA---AATATCTATGAT--GATTGGC---CA-T--GAA-CTTTGT-TCT
gi|114623 : TCAATCCAGGGG-TCATGAGTTTAACT-CCCC-GCCTGGCCA--CATTCTCAATGAT--GAATGGT---CATT--A-A-CTTTG
gi|114628 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCTC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGATA--
gi|114630 : TCAATCCAGGGG-TCATGAGTTCAAAT-CCCC-ACCCGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114635 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114638 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGGTCA--CGCTCTCTGTGAT--GATTGATA--TA-C--A-A-CTTTGTGTCT
gi|114640 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-ACCCGGCAA--CACTCTCTGTGAT--GATTG
gi|114643 : TCAATCCAGAGG-TCGTGAGTTCGAAT-CCCC-ACCCGGCCA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114644 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114651 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCTGGCAA--CAGTCTCGGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114654 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114656 : TCAATCCAGGGG-TTGTGTATTTGAAT-CCCC-ACCTGTTCA--CAATCTCTGTGATCAAATTG
gi|114661 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGgccacaatctttgttc
gi|114664 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114670 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114675 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-G--G-A-CATTGTGTCT
gi|114676 : TCAATCCAGGGA-TCGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114679 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCA-ATCTGGCCA--CAGTCTCTGTGAT--GACTG
gi|114683 : TCAATTCAGGGG-TCGTGAGTTCAAAT-CCCT-ACCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114684 : TCAATCCAGGGGTTCATGATTTCAATT-TCCC-AACAGGCCA--CAGTTTCTATGAC--AATTGGT---CA-T--GAA-CTTTGT-TCT
gi|114685 : TCAATC-AAGGG-TTGTGAGTTTGATT-CTTC-GCCTGGTTA--CAGTCTCTGTGAT--GA---ATAGCCA-T--G-AGCTTTGT-TCT
gi|114687 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCCTGCCTGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CTTTGTGTCT
gi|114689 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-C--A-A-CATTGTGTCT
gi|114692 : TCAATCCAGGGG-TCATAAGTTTGAAT-CCCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-C--A-A-CATTGTGTCT
gi|114694 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCTGGTAA--CAGTCTCTGTGAC--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114696 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CTCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCT
gi|114698 : TCAATCCAGGGG-TCGTGAGTTAAAAT-CCCC-TCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114701 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCCGGCAA--CAGTCTCAGTGAT--GATTG
gi|114702 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--
gi|114703 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--aac
gi|114705 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCCGGCAA--CAGTCTCTGTGAT--GATTGaac
gi|114707 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCCCACCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114708 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114710 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCGGCAA--AAGTCTCCGTGAT--GATTG
gi|114715 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-GCCTGGCAA--CAGTCTCTGTGAT--GATTG
gi|114719 : TCGATCCAGGGC-ACATGAGTTTAAAT-CCCT-GCCCAGCCA--AAGTCTCTGTGAT--GAT--AAC--CA-T--GAA-CTTTGT
gi|114721 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCTGGCAA--CAGTCTCCGTGAT--GATTGt
gi|114724 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCAA--CAGTCTCAGTGAT--GATTG
gi|114725 : TCAATCCAGGGG-TCGTGAGTTTAAAT-CCCC-TCCTGACAA--CAGTCTCAATGAT--GATTGATA--TG-C--G-A-CATTGTGTCT
gi|114730 : TCAATCCAGGGG-TTGTGAGTTCAAAT-CCCC-ACTCCGCCA--CAGTCTCCGTGAT--GATTGATA--CACT--A-A-CATTTTG
gi|114733 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-ACCCTGCAA--CAGTCTCTGTGAT--GATTAGTA--TA-C--A-A-CATTGTGTCT
gi|114735 : TCAATCAGGGGG-ACTCGAGTCTGAAT-CCCT-ACCTGGTCA--CAGCCTCTGTGAT--GATTGGT---CA-T--G-A-
gi|114737 : TCAATCCAGGGG-TAGTGAGTTCAAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCTatgttattct
gi|114738 : TCAATCCAGGGG-TCGTGAGTTCAGAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114744 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114745 : TCAATCCAGGGG-TCATGAGTTTGAAT-CCCT-GCCCAGTCA--CAGTCTCTGTGAT--GATTG
gi|114747 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114749 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCCCGACAA--CAGTCTCCGTGAT--GATTG
gi|114750 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GCATGGCCA--CAGTCTCCATGAT--GGTTG
gi|114754 : TCAATCCAGGGG-TCGTGAGTTCAAAT-CCCC-GCCCGGTAA--CAGTCTCCGTGAT--GATTG
gi|114755 : TCAATCCAGGGA-TCGTGAGTTCAAGT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114758 : TCAATCAAGGGG-TCGTGAGTTCGAAT-CCCC-GCCTGGCTA--CAGTCTCCGTGAT--GATTG
gi|114759 : TCAATCCAGGGG-TCTTGAGTTTGAAT-CCCC-ACCTGGCCA--CAGTCTTCATGAT--GACTG
gi|114760 : TCAATTCAGGGG-TCATGAGTTTGAAT-CCCC-ACCCGGCAA--CAGTCTCTATGAT--GATTG
gi|114765 : TCAAACCTGTGG-TTTTGAGTTTGAAT-CCTC-GCCGGGTCA--GAGTTTCTGTGAT--GATTGGC---CA-T--GAA-CCTTGT-TCT
gi|114768 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCG-ACTCGGCAA--CAGTCTCTGTGAT--GATTAATA--TA-T--G-A-AATTGTG
gi|114772 : TCAATCCAGGGG-TCGTAAGTTTGAAT-ACCC-GCCCGGCCA--CAGTCTCTGTGAC--GA---ATG--CA-T--G-
gi|114778 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGTGTCTttcaggaactttg
gi|114783 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTTCGTGAT--GGTTG
gi|114784 : TCAATCCAGGGG-TCACGAGTTCGAAT-CCCC-GCCCGGCCA--CAGTCTCCGTGAT--GATTG
gi|114789 : TCAATCCAGGTG-TCTCGAGTTTGAAT-CCCC-ACCCGGCGA--CAGTCTCTGTGAT--GATTGACA--TA-C--A-A-CATTGTGTCT
gi|114791 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--TA-T--G-A-CATTGT
gi|114795 : TCAATCAAGGGG-TTGTGAGTTTAAAT-CCCC-ATCGGACCA--CAGTCTCTGTGAT--GATTt
gi|114798 : TCAATCCAGAGG-TCAAGGGTTTGAA--CCCA-GCCCAGCCA--CAATCTCTGTGAT--GATTGGT---CA-T--GAA-CTCTGT
gi|114799 : TCAATCCAGGGG-TCGTGAATTCGAAT-CCCC-GCCCGGCAA--CAATCTCTGTGAT--GATTG
gi|114804 : TCAATCCAGGGG-TCGTGAGTTCGAAT-CCCC-TCCTGGCAA--CAGTATCTGTGAT--GATTGATA--TG-C--G-A-CATTGTGTCTg
gi|114807 : TCAATCCAGGGG-TTGTGAGTTTGAAT-CCTC-GCCCGGCCA--CAGTCTCCATGAT--GATTG
gi|114813 : TCAATCCAGGGG-TTGTGAGTTCGAAT-CCCC-ATCTGGCCA--CAATTTCTGTGAT--GGTTG
gi|114816 : TCAAACCAGGAG-TAGTCAGCTCAAAT-CCCC-ACCCAGTCA--CTGTCTCTGCGGT--GATCGG-A--CA-T--GAA-CTTTGT-TCT
gi|114822 : TCAATCCAGGGG-TCGTGCGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|114823 : TCAATTCAGGGG-TCGTGAGTTCGAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTGATA--
gi|114826 : TCAATCCAGGGG-TCGTGAGTTCGAATCCCCC-ACCCGGCAA--CAGTCTCCGTGAT--GATTGaac
gi|114827 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-GTCTGGCAG--CAGTCTCCATGAT--GATTGAT---TA-TTCA-A-CATTGTATCT
gi|114830 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCCCGCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114831 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCCTGCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114839 : TCAATCCAGGGG-TCGTGAGTTTGGAT-CCCC-ACCCAGCAA--CAGTCTCCGTGAT--GATT
gi|114841 : TCAATCCAGGGG-TCGTGAGTTCTAAT-CCCC-GCCCGGCAA--CAGTCTCCGTGAT--GATTG
gi|114843 : TCAATCCAGGGG-TCGTGAGTTCAAATCCCCC-GTCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|114845 : TCAATCCAGGGG-TCATGAGCTTGAAT-CCCCCGCCTGGCAA--CAGTCTCTGTGAT--GATTG
gi|114850 : TCAATCCAGGGG-TCGTGAGTTTGAAT-CCCC-ACCCTGCAA--CAATCTCTGTGAC--GATTG
gi|114855 : TCAATCTAGGGG-TCGTGAGTTCAAAT-CCCCCGCCCGGCAA--CAGTCTCTGTGAT--GATTG
gi|115241 : CAATCCAGAGG-TTGTGAGTTCAAAC-ACCC-CACCGACCA--CAGTCTCTGTGAT--GAGTGAC---CA-T--GAA-CTTTGT-TCT
gi|115242 : CAGTCCAGGGG-TTGTGAGTCTAAAT-CTCC-ACCTGGCCA--CAGTCTCTTAAAT--GGTTGCT---CA-T--GAA-CTTTGT-TCT
gi|115243 : CAATCCAGGGG-TTGTGAGTTTGAAT-CCTG-GCCAGGTGA--CAGTCTCTGTGAT--GATTGGC---CA-T--GCA-CTT
gi|115253 : CAATCCAGGGG-TCGTGAGTTTGAAT-CCCCCGCCTGGCAA--CAGTCTCCGTGAT--GATTG
gi|115275 : AATTCAGGGG-TCACAAGTTTGACC-CCCC-ACCTGGCCA--CAGTCTCTGTGAT--GATTGGT---CA-T--G-A-CCTT-TG
gi|115277 : AATCCAGGGG-TCTTGGCTTTAAAT-CTCC-ACCTGGC----CAGTCTATGTGAT--AATTGGT---CA-T--GAA-CTTTGT-TCTtct
gi|115279 : AATCCAGGGG-CCATGAGTTTGAAT-CCCC-ACCTGGACA--CTGTCTCTGTGAT--GACTGATA--TA-T--G-A-ACTTGTG
gi|115284 : AATCCAGGGG-TCGTGAGTTTGAAT-CTCC-ACTTGGCCA--CAGTCTCAATGAT--GATTG
gi|115285 : AATCCAGAGG-TCACGAGTTCTAAT-CCTC-ATCCAGCCA--CAGTCTCTGCGAT--GATT
gi|115314 : TCCAGGTG-TCGTGAGTCTGAAT-CCTC-ACCTGGCCA--CAGTCTCTTTGAT--GGTTAGC---CA-T--GAA-CTTTGT-TCTtgccatgcacttttgttc
gi|115315 : TCCAGGGG-TTGTAAAATTGAAG-CCAC-ACCCAGTCA--CAGTCTCTGTGAT--GATTAGC---CA-T--GAA-CTTTGT-TCT
gi|115317 : TCCAGAGG-TCGTGAGTTTGAAT-CACT-GCCCG--AATTCAGCCTCTCTGAT--GATTGGC---CA-T--GAA-CTTTGT-TCT