lowQualScore : 0 0 0 1 1 1 1 6 2
lowQualScore : . . . . . . . . .
lowQualScore : 7 7 7 4 5 4 5 5 5
consensus : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
Reference ( gi|50403 ) : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAGTATAACATATTGCATAG
gi|50406 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAGCACCAGTATAACATCTCGCATA
gi|50407 : CATAGGCAG-CAATTT-AC-TAAGCA-CTCCCC-GAACGCCAGTATAACATCTCGTATAG
gi|50404 : CATAGGCAG-CAATTA-AT-TAACTA-CTCCCC-GAACGACAGTATAATATATCGCATAG
gi|50408 : CATAGGCAG-CAATTT-AC-TCACTA-CTCTCC-GAACGCCAGTATAACATCTCGCAAAG
gi|50405 : CATAGTCAG-AAATTT-AT-TAACTA-CTCCCC-GAACGCCAGTATAACATCTCGCATAG
gi|50409 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATGATATCTCGCATAG
gi|50416 : CATAGGCAA-CAATTT-AC-TTACTA-TTCCCC-AAACGCCAATATAACATCTTGCATAG
gi|50410 : CATATGCAG-TAATTT-AC-TAACTA-CTCCCC-GAACGTCAATATAACATATCGCTTAG
gi|50412 : CATATGCAG-CAATTT-AC-TTACAA-CTCCTC-GAACGCCAGTATAACATATCGCATA
gi|50411 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTGC-GAAAGCCAATATAACATATCGCAAAG
gi|50426 : CATAGGCAG-CAATTT-AC-TAACTT-CTCCCC-GGACGCAAGTATTATATCTTGCATAG
gi|50413 : CAAAGACAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATAACATGTCGCAT
gi|50429 : CATAGGTAG-AAATTT-AC-TAATTA-TTTCCC-AAACGCCAATATAACATATTGCATA
gi|50414 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATAAATTATCACATAG
gi|50415 : CATAGGCAG-CAATTT-AC-TTGCTA-CTCCAC-GAACGCCAATATAACATCTCGCAT
gi|50427 : CATAGGCAA-TAATTT-GA-TAACTA-CTCCCC-GAA-ACCAGTATAACATCTTGCATAG
gi|50419 : CATAGGCAA-CAATTT-AC-TAACTA-TTCCCC-AAACGCCAATAGAACCTCTCGCATAG
gi|50420 : CATAGGCAA-CAAATT-GT-TAATTC-CTCCCC-GAACGCCAGTATAGCATCTTGCATAG
gi|50421 : CATTGGCAG-AAATTT-AC-TAACTA-CTCGAC-GAACGCCAATATAACATATCGCAT
gi|50422 : CATAGGCAG-AAAGTT-AC-TTACTAACTCCCC-GAACGCCAATATACCATATCGCATAG
gi|50423 : CATAGGCAG-CAATTA-AC-TAACTAACTCCAC-GAACGCCAATATACCATAACGCATAG
gi|50424 : CATAGTTAG-CAATTT-AC-TCACTA-CTCCAC-GAACGCCAATATAACATCTCGTATAG
gi|50418 : CATAGGCAG-CAATTT-TA-AAACTA-CTTCAC-GAACGCCAATATAACATATCGCATA
gi|50438 : CATATGCAA-CAATTT-GC-TAACTA-CTCTCC-GAACGCCAATAT---ATCTTGCATAG
gi|50417 : CATAGGCAG-CAATTTGAA-T-ACTA-CTTCAC-GAACGCCAATATAACATATCACATAG
gi|50431 : CATAGGCAG-AAATTT-AC-TCACTA-CTCTAC-GAACGCCAATTTAACATCTCGCATAG
gi|50430 : CATAGGCAG-CCATTT-ACCTAACTA-CTGTAG-GAACGCCAATATAACATATCGCATAG
gi|50439 : CAAAGGCAG-CAATTT-AC-TAACTA-CTCCAC-TAACGCAAATATGATATCTTGCATAG
gi|50441 : CATAGGCAG-CAATTT-AC-TAACTA-CT-CCC-GAACGCCATTTAAACATCTTGC
gi|50437 : CATAAGCAG-CAATTT-GA-AAACTA-CTTCAT-GAACGCCAATATAACATCTTGCATAG
gi|50428 : CATAGGCAG-CAATTT-GA-AAACTA-CTTCAC-CAACGCCAATATAACATATCACATAG
gi|50434 : CATAGGCAG-CAATTC-AC-TAACAA-CTCCAC-GAACGCCAATTTAACATCTCACAT
gi|50435 : CATTGGTAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATATGATCTCGCATAG
gi|50436 : CATAGGCAG-CAATTA-GT-TAAATA-CTCCCA-AAACGACAATATAACATTTTGCATAG
gi|50425 : CATAGGCAG-TAATTG-GT-TAACTA-CTCCCA-AAACGCCAATATATCATCTCGCATAG
gi|50433 : CATAGGCGG-TAATTC-GA-AAACAA-CTCCAC-GAACGCCAATATAACATATCGCATAG
gi|50447 : CATAGGCAG-CAATTT-CA-AAAATA-CTTCAT-GAACGCCAACATAACATATTGTATAG
gi|50432 : CATAGGTAG-AAATTT-GT-TATCTA-CTCCCC-AAACGCCAAGATAACATTTCACATAG
gi|50445 : CATAGTCAG-AAATTT-AC-TAA-----TCACC-GAACGCCGGTATAACATCTCGCATA
gi|50444 : CATAGGCAG-CAATTG-AC-TAACTA-CTCCAC-GAACGCAAATTTATCATCTCACAT
gi|50446 : CATTGGTAG-CAATTT-AC-TAACTA-CTCCCG-AAACGCCA--ATTACATCTCACATAG
gi|50448 : CATAAGCAG-AAAAAT-AC-TAACTA-CTCCCG-AAACGCCAGAATAACATCTCGCAAAG
gi|50450 : CATCAACAG-CAATTT-AC-TCACGT-CTCCCT-AAACGCCAGTATAAC-TCTCGCATAG
gi|50440 : CATAGGAGG-AAATGT-GT-TAATTA-CTCCC--GAACGCCATTATAACATCTCGCATAG
gi|50442 : CATAGGC-G-TAATTT-AT-TAACTA-CTCAAG-GAACGCCAATATATTATCTCGCATAG
gi|50451 : CATAAGCAG-CAATTT-GA-AATCTA-CTTCAC-GAACGCCAGTATAACAGCTAGCATA
gi|50449 : CATAGACAA-CACTTT-GA-AAACTA-CTTCAA-GAACGCCATTATAACATATCACATAG
gi|50443 : CATTGGCAA-CAATTT-GT-TAACTT-TTCCCCCAAACGCAAGTATAACTTCTCGCATAG
gi|50453 : CATAGGCAG-CAATAT-CC-TTACCA-CTCTTG-CAACGACAGTACAACATCTCGCATAG
gi|50452 : CATTGGCAA-CAATGT-GT-TAACTT-CTCCCCCAAACAACAGTATAACTTCTCGCATAG
gi|50454 : ATAGACAG-CAATTT-AC-TGACTA-CTCCCC-AAACGCCAATATAACATTTTGCATAG
gi|50456 : ATGGGCAG-CAATTT-AC-TAACTA-TTCTAC-TAACGCCAGTATAACATCTTGCATAG
gi|50455 : ATAGGCAGACAATTG-AC-TAA-----TCCCC-GAACGCCAGTATAACATATCGCATAG
gi|50457 : ATAGGCAG-ACATTT-GA-AAACTA-CGTCAC-GAACGCCAATATAACATATCACATAG
gi|50458 : TAGGCAG-CAATTT-AC-TAACTA-TGCCCC-GAACGCCAGTATAACATATTGCATA
gi|50459 : TACGCCG-CAACTT-AC-TAACTT-GTCCCC-GAACGCCAATATAACATATCGCAT
gi|50460 : AGACAG-CAATCT-AC-TAACTT-CTCCCC-AAAAGCCAGTATATCACCTCGCATAG
Alignments
lowQualScore : 0 0 0 1 1 1 0
lowQualScore : . . . . . . .
lowQualScore : 7 7 7 4 3 4 3
consensus : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
Reference ( family-448 ) : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
gi|50403 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAGTATAACATATTGCATAG
gi|50404 : CATAGGCAG-CAATTA-AT-TAACTA-CTCCCC-GAACGACAGTATAATATATCGCATAG
gi|50405 : CATAGTCAG-AAATTT-AT-TAACTA-CTCCCC-GAACGCCAGTATAACATCTCGCATAG
gi|50406 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAGCACCAGTATAACATCTCGCATA
gi|50407 : CATAGGCAG-CAATTT-AC-TAAGCA-CTCCCC-GAACGCCAGTATAACATCTCGTATAG
gi|50408 : CATAGGCAG-CAATTT-AC-TCACTA-CTCTCC-GAACGCCAGTATAACATCTCGCAAAG
gi|50409 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATGATATCTCGCATAG
gi|50410 : CATATGCAG-TAATTT-AC-TAACTA-CTCCCC-GAACGTCAATATAACATATCGCTTAG
gi|50411 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTGC-GAAAGCCAATATAACATATCGCAAAG
gi|50412 : CATATGCAG-CAATTT-AC-TTACAA-CTCCTC-GAACGCCAGTATAACATATCGCATA
gi|50413 : CAAAGACAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATAACATGTCGCAT
gi|50414 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATAAATTATCACATAG
gi|50415 : CATAGGCAG-CAATTT-AC-TTGCTA-CTCCAC-GAACGCCAATATAACATCTCGCAT
gi|50416 : CATAGGCAA-CAATTT-AC-TTACTA-TTCCCC-AAACGCCAATATAACATCTTGCATAG
gi|50417 : CATAGGCAG-CAATTTGAA-T-ACTA-CTTCAC-GAACGCCAATATAACATATCACATAG
gi|50418 : CATAGGCAG-CAATTT-TA-AAACTA-CTTCAC-GAACGCCAATATAACATATCGCATA
gi|50419 : CATAGGCAA-CAATTT-AC-TAACTA-TTCCCC-AAACGCCAATAGAACCTCTCGCATAG
gi|50420 : CATAGGCAA-CAAATT-GT-TAATTC-CTCCCC-GAACGCCAGTATAGCATCTTGCATAG
gi|50421 : CATTGGCAG-AAATTT-AC-TAACTA-CTCGAC-GAACGCCAATATAACATATCGCAT
gi|50422 : CATAGGCAG-AAAGTT-AC-TTACTAACTCCCC-GAACGCCAATATACCATATCGCATAG
gi|50423 : CATAGGCAG-CAATTA-AC-TAACTAACTCCAC-GAACGCCAATATACCATAACGCATAG
gi|50424 : CATAGTTAG-CAATTT-AC-TCACTA-CTCCAC-GAACGCCAATATAACATCTCGTATAG
gi|50425 : CATAGGCAG-TAATTG-GT-TAACTA-CTCCCA-AAACGCCAATATATCATCTCGCATAG
gi|50426 : CATAGGCAG-CAATTT-AC-TAACTT-CTCCCC-GGACGCAAGTATTATATCTTGCATAG
gi|50427 : CATAGGCAA-TAATTT-GA-TAACTA-CTCCCC-GAA-ACCAGTATAACATCTTGCATAG
gi|50428 : CATAGGCAG-CAATTT-GA-AAACTA-CTTCAC-CAACGCCAATATAACATATCACATAG
gi|50429 : CATAGGTAG-AAATTT-AC-TAATTA-TTTCCC-AAACGCCAATATAACATATTGCATA
gi|50430 : CATAGGCAG-CCATTT-ACCTAACTA-CTGTAG-GAACGCCAATATAACATATCGCATAG
gi|50431 : CATAGGCAG-AAATTT-AC-TCACTA-CTCTAC-GAACGCCAATTTAACATCTCGCATAG
gi|50432 : CATAGGTAG-AAATTT-GT-TATCTA-CTCCCC-AAACGCCAAGATAACATTTCACATAG
gi|50433 : CATAGGCGG-TAATTC-GA-AAACAA-CTCCAC-GAACGCCAATATAACATATCGCATAG
gi|50434 : CATAGGCAG-CAATTC-AC-TAACAA-CTCCAC-GAACGCCAATTTAACATCTCACAT
gi|50435 : CATTGGTAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATATGATCTCGCATAG
gi|50436 : CATAGGCAG-CAATTA-GT-TAAATA-CTCCCA-AAACGACAATATAACATTTTGCATAG
gi|50437 : CATAAGCAG-CAATTT-GA-AAACTA-CTTCAT-GAACGCCAATATAACATCTTGCATAG
gi|50438 : CATATGCAA-CAATTT-GC-TAACTA-CTCTCC-GAACGCCAATAT---ATCTTGCATAG
gi|50439 : CAAAGGCAG-CAATTT-AC-TAACTA-CTCCAC-TAACGCAAATATGATATCTTGCATAG
gi|50440 : CATAGGAGG-AAATGT-GT-TAATTA-CTCCC--GAACGCCATTATAACATCTCGCATAG
gi|50441 : CATAGGCAG-CAATTT-AC-TAACTA-CT-CCC-GAACGCCATTTAAACATCTTGC
gi|50442 : CATAGGC-G-TAATTT-AT-TAACTA-CTCAAG-GAACGCCAATATATTATCTCGCATAG
gi|50443 : CATTGGCAA-CAATTT-GT-TAACTT-TTCCCCCAAACGCAAGTATAACTTCTCGCATAG
gi|50444 : CATAGGCAG-CAATTG-AC-TAACTA-CTCCAC-GAACGCAAATTTATCATCTCACAT
gi|50445 : CATAGTCAG-AAATTT-AC-TAA-----TCACC-GAACGCCGGTATAACATCTCGCATA
gi|50446 : CATTGGTAG-CAATTT-AC-TAACTA-CTCCCG-AAACGCCAAT-T-ACATCTCACATAG
gi|50447 : CATAGGCAG-CAATTT-CA-AAAATA-CTTCAT-GAACGCCAACATAACATATTGTATAG
gi|50448 : CATAAGCAG-AAAAAT-AC-TAACTA-CTCCCG-AAACGCCAGAATAACATCTCGCAAAG
gi|50449 : CATAGACAA-CACTTT-GA-AAACTA-CTTCAA-GAACGCCATTATAACATATCACATAG
gi|50450 : CATCAACAG-CAATTT-AC-TCACGT-CTCCCT-AAACGCCAGTATAAC-TCTCGCATAG
gi|50451 : CATAAGCAG-CAATTT-GA-AATCTA-CTTCAC-GAACGCCAGTATAACAGCTAGCATA
gi|50452 : CATTGGCAA-CAATGT-GT-TAACTT-CTCCCCCAAACAACAGTATAACTTCTCGCATAG
gi|50453 : CATAGGCAG-CAATAT-CC-TTACCA-CTCTTG-CAACGACAGTACAACATCTCGCATAG
gi|50454 : ATAGACAG-CAATTT-AC-TGACTA-CTCCCC-AAACGCCAATATAACATTTTGCATAG
gi|50455 : ATAGGCAGACAATTG-AC-TAA-----TCCCC-GAACGCCAGTATAACATATCGCATAG
gi|50456 : ATGGGCAG-CAATTT-AC-TAACTA-TTCTAC-TAACGCCAGTATAACATCTTGCATAG
gi|50457 : ATAGGCAG-ACATTT-GA-AAACTA-CGTCAC-GAACGCCAATATAACATATCACATAG
gi|50458 : TAGGCAG-CAATTT-AC-TAACTA-TGCCCC-GAACGCCAGTATAACATATTGCATA
gi|50459 : TACGCCG-CAACTT-AC-TAACTT-GTCCCC-GAACGCCAATATAACATATCGCAT
gi|50460 : AGACAG-CAATCT-AC-TAACTT-CTCCCC-AAAAGCCAGTATATCACCTCGCATAG
Alignments
lowQualScore : 0 0 0 1 1 1 0
lowQualScore : . . . . . . .
lowQualScore : 7 7 7 4 3 4 3
consensus : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
Reference ( family-448 ) : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
gi|50403 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAGTATAACATATTGCATAG
gi|50404 : CATAGGCAG-CAATTA-AT-TAACTA-CTCCCC-GAACGACAGTATAATATATCGCATAG
gi|50405 : CATAGTCAG-AAATTT-AT-TAACTA-CTCCCC-GAACGCCAGTATAACATCTCGCATAG
gi|50406 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAGCACCAGTATAACATCTCGCATA
gi|50407 : CATAGGCAG-CAATTT-AC-TAAGCA-CTCCCC-GAACGCCAGTATAACATCTCGTATAG
gi|50408 : CATAGGCAG-CAATTT-AC-TCACTA-CTCTCC-GAACGCCAGTATAACATCTCGCAAAG
gi|50409 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATGATATCTCGCATAG
gi|50410 : CATATGCAG-TAATTT-AC-TAACTA-CTCCCC-GAACGTCAATATAACATATCGCTTAG
gi|50411 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTGC-GAAAGCCAATATAACATATCGCAAAG
gi|50412 : CATATGCAG-CAATTT-AC-TTACAA-CTCCTC-GAACGCCAGTATAACATATCGCATA
gi|50413 : CAAAGACAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATAACATGTCGCAT
gi|50414 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATAAATTATCACATAG
gi|50415 : CATAGGCAG-CAATTT-AC-TTGCTA-CTCCAC-GAACGCCAATATAACATCTCGCAT
gi|50416 : CATAGGCAA-CAATTT-AC-TTACTA-TTCCCC-AAACGCCAATATAACATCTTGCATAG
gi|50417 : CATAGGCAG-CAATTTGAA-T-ACTA-CTTCAC-GAACGCCAATATAACATATCACATAG
gi|50418 : CATAGGCAG-CAATTT-TA-AAACTA-CTTCAC-GAACGCCAATATAACATATCGCATA
gi|50419 : CATAGGCAA-CAATTT-AC-TAACTA-TTCCCC-AAACGCCAATAGAACCTCTCGCATAG
gi|50420 : CATAGGCAA-CAAATT-GT-TAATTC-CTCCCC-GAACGCCAGTATAGCATCTTGCATAG
gi|50421 : CATTGGCAG-AAATTT-AC-TAACTA-CTCGAC-GAACGCCAATATAACATATCGCAT
gi|50422 : CATAGGCAG-AAAGTT-AC-TTACTAACTCCCC-GAACGCCAATATACCATATCGCATAG
gi|50423 : CATAGGCAG-CAATTA-AC-TAACTAACTCCAC-GAACGCCAATATACCATAACGCATAG
gi|50424 : CATAGTTAG-CAATTT-AC-TCACTA-CTCCAC-GAACGCCAATATAACATCTCGTATAG
gi|50425 : CATAGGCAG-TAATTG-GT-TAACTA-CTCCCA-AAACGCCAATATATCATCTCGCATAG
gi|50426 : CATAGGCAG-CAATTT-AC-TAACTT-CTCCCC-GGACGCAAGTATTATATCTTGCATAG
gi|50427 : CATAGGCAA-TAATTT-GA-TAACTA-CTCCCC-GAA-ACCAGTATAACATCTTGCATAG
gi|50428 : CATAGGCAG-CAATTT-GA-AAACTA-CTTCAC-CAACGCCAATATAACATATCACATAG
gi|50429 : CATAGGTAG-AAATTT-AC-TAATTA-TTTCCC-AAACGCCAATATAACATATTGCATA
gi|50430 : CATAGGCAG-CCATTT-ACCTAACTA-CTGTAG-GAACGCCAATATAACATATCGCATAG
gi|50431 : CATAGGCAG-AAATTT-AC-TCACTA-CTCTAC-GAACGCCAATTTAACATCTCGCATAG
gi|50432 : CATAGGTAG-AAATTT-GT-TATCTA-CTCCCC-AAACGCCAAGATAACATTTCACATAG
gi|50433 : CATAGGCGG-TAATTC-GA-AAACAA-CTCCAC-GAACGCCAATATAACATATCGCATAG
gi|50434 : CATAGGCAG-CAATTC-AC-TAACAA-CTCCAC-GAACGCCAATTTAACATCTCACAT
gi|50435 : CATTGGTAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATATGATCTCGCATAG
gi|50436 : CATAGGCAG-CAATTA-GT-TAAATA-CTCCCA-AAACGACAATATAACATTTTGCATAG
gi|50437 : CATAAGCAG-CAATTT-GA-AAACTA-CTTCAT-GAACGCCAATATAACATCTTGCATAG
gi|50438 : CATATGCAA-CAATTT-GC-TAACTA-CTCTCC-GAACGCCAATAT---ATCTTGCATAG
gi|50439 : CAAAGGCAG-CAATTT-AC-TAACTA-CTCCAC-TAACGCAAATATGATATCTTGCATAG
gi|50440 : CATAGGAGG-AAATGT-GT-TAATTA-CTCCC--GAACGCCATTATAACATCTCGCATAG
gi|50441 : CATAGGCAG-CAATTT-AC-TAACTA-CT-CCC-GAACGCCATTTAAACATCTTGC
gi|50442 : CATAGGC-G-TAATTT-AT-TAACTA-CTCAAG-GAACGCCAATATATTATCTCGCATAG
gi|50443 : CATTGGCAA-CAATTT-GT-TAACTT-TTCCCCCAAACGCAAGTATAACTTCTCGCATAG
gi|50444 : CATAGGCAG-CAATTG-AC-TAACTA-CTCCAC-GAACGCAAATTTATCATCTCACAT
gi|50445 : CATAGTCAG-AAATTT-AC-TAA-----TCACC-GAACGCCGGTATAACATCTCGCATA
gi|50446 : CATTGGTAG-CAATTT-AC-TAACTA-CTCCCG-AAACGCCAAT-T-ACATCTCACATAG
gi|50447 : CATAGGCAG-CAATTT-CA-AAAATA-CTTCAT-GAACGCCAACATAACATATTGTATAG
gi|50448 : CATAAGCAG-AAAAAT-AC-TAACTA-CTCCCG-AAACGCCAGAATAACATCTCGCAAAG
gi|50449 : CATAGACAA-CACTTT-GA-AAACTA-CTTCAA-GAACGCCATTATAACATATCACATAG
gi|50450 : CATCAACAG-CAATTT-AC-TCACGT-CTCCCT-AAACGCCAGTATAAC-TCTCGCATAG
gi|50451 : CATAAGCAG-CAATTT-GA-AATCTA-CTTCAC-GAACGCCAGTATAACAGCTAGCATA
gi|50452 : CATTGGCAA-CAATGT-GT-TAACTT-CTCCCCCAAACAACAGTATAACTTCTCGCATAG
gi|50453 : CATAGGCAG-CAATAT-CC-TTACCA-CTCTTG-CAACGACAGTACAACATCTCGCATAG
gi|50454 : ATAGACAG-CAATTT-AC-TGACTA-CTCCCC-AAACGCCAATATAACATTTTGCATAG
gi|50455 : ATAGGCAGACAATTG-AC-TAA-----TCCCC-GAACGCCAGTATAACATATCGCATAG
gi|50456 : ATGGGCAG-CAATTT-AC-TAACTA-TTCTAC-TAACGCCAGTATAACATCTTGCATAG
gi|50457 : ATAGGCAG-ACATTT-GA-AAACTA-CGTCAC-GAACGCCAATATAACATATCACATAG
gi|50458 : TAGGCAG-CAATTT-AC-TAACTA-TGCCCC-GAACGCCAGTATAACATATTGCATA
gi|50459 : TACGCCG-CAACTT-AC-TAACTT-GTCCCC-GAACGCCAATATAACATATCGCAT
gi|50460 : AGACAG-CAATCT-AC-TAACTT-CTCCCC-AAAAGCCAGTATATCACCTCGCATAG
blockSeqs : A C C
blockSeqs : A C C
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . G .
blockSeqs : . T .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . T .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . A .
blockSeqs : . A .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . C .
blockSeqCons :
originalCons : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
finalCons : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
Alignments
lowQualScore : 0 0 0 1 1 1 0
lowQualScore : . . . . . . .
lowQualScore : 7 7 7 4 3 4 3
consensus : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
Reference ( family-448 ) : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAATATAACATCTCGCATAG
gi|50403 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAACGCCAGTATAACATATTGCATAG
gi|50404 : CATAGGCAG-CAATTA-AT-TAACTA-CTCCCC-GAACGACAGTATAATATATCGCATAG
gi|50405 : CATAGTCAG-AAATTT-AT-TAACTA-CTCCCC-GAACGCCAGTATAACATCTCGCATAG
gi|50406 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCCC-GAGCACCAGTATAACATCTCGCATA
gi|50407 : CATAGGCAG-CAATTT-AC-TAAGCA-CTCCCC-GAACGCCAGTATAACATCTCGTATAG
gi|50408 : CATAGGCAG-CAATTT-AC-TCACTA-CTCTCC-GAACGCCAGTATAACATCTCGCAAAG
gi|50409 : CATAGGCAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATGATATCTCGCATAG
gi|50410 : CATATGCAG-TAATTT-AC-TAACTA-CTCCCC-GAACGTCAATATAACATATCGCTTAG
gi|50411 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTGC-GAAAGCCAATATAACATATCGCAAAG
gi|50412 : CATATGCAG-CAATTT-AC-TTACAA-CTCCTC-GAACGCCAGTATAACATATCGCATA
gi|50413 : CAAAGACAG-CAATTT-AC-TAACTA-CTCCAC-GAACGCCAATATAACATGTCGCAT
gi|50414 : CATAGGCAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATAAATTATCACATAG
gi|50415 : CATAGGCAG-CAATTT-AC-TTGCTA-CTCCAC-GAACGCCAATATAACATCTCGCAT
gi|50416 : CATAGGCAA-CAATTT-AC-TTACTA-TTCCCC-AAACGCCAATATAACATCTTGCATAG
gi|50417 : CATAGGCAG-CAATTTGAA-T-ACTA-CTTCAC-GAACGCCAATATAACATATCACATAG
gi|50418 : CATAGGCAG-CAATTT-TA-AAACTA-CTTCAC-GAACGCCAATATAACATATCGCATA
gi|50419 : CATAGGCAA-CAATTT-AC-TAACTA-TTCCCC-AAACGCCAATAGAACCTCTCGCATAG
gi|50420 : CATAGGCAA-CAAATT-GT-TAATTC-CTCCCC-GAACGCCAGTATAGCATCTTGCATAG
gi|50421 : CATTGGCAG-AAATTT-AC-TAACTA-CTCGAC-GAACGCCAATATAACATATCGCAT
gi|50422 : CATAGGCAG-AAAGTT-AC-TTACTAACTCCCC-GAACGCCAATATACCATATCGCATAG
gi|50423 : CATAGGCAG-CAATTA-AC-TAACTAACTCCAC-GAACGCCAATATACCATAACGCATAG
gi|50424 : CATAGTTAG-CAATTT-AC-TCACTA-CTCCAC-GAACGCCAATATAACATCTCGTATAG
gi|50425 : CATAGGCAG-TAATTG-GT-TAACTA-CTCCCA-AAACGCCAATATATCATCTCGCATAG
gi|50426 : CATAGGCAG-CAATTT-AC-TAACTT-CTCCCC-GGACGCAAGTATTATATCTTGCATAG
gi|50427 : CATAGGCAA-TAATTT-GA-TAACTA-CTCCCC-GAA-ACCAGTATAACATCTTGCATAG
gi|50428 : CATAGGCAG-CAATTT-GA-AAACTA-CTTCAC-CAACGCCAATATAACATATCACATAG
gi|50429 : CATAGGTAG-AAATTT-AC-TAATTA-TTTCCC-AAACGCCAATATAACATATTGCATA
gi|50430 : CATAGGCAG-CCATTT-ACCTAACTA-CTGTAG-GAACGCCAATATAACATATCGCATAG
gi|50431 : CATAGGCAG-AAATTT-AC-TCACTA-CTCTAC-GAACGCCAATTTAACATCTCGCATAG
gi|50432 : CATAGGTAG-AAATTT-GT-TATCTA-CTCCCC-AAACGCCAAGATAACATTTCACATAG
gi|50433 : CATAGGCGG-TAATTC-GA-AAACAA-CTCCAC-GAACGCCAATATAACATATCGCATAG
gi|50434 : CATAGGCAG-CAATTC-AC-TAACAA-CTCCAC-GAACGCCAATTTAACATCTCACAT
gi|50435 : CATTGGTAG-CAATTT-AC-TAACTA-CTCTAC-GAACGCCAATATATGATCTCGCATAG
gi|50436 : CATAGGCAG-CAATTA-GT-TAAATA-CTCCCA-AAACGACAATATAACATTTTGCATAG
gi|50437 : CATAAGCAG-CAATTT-GA-AAACTA-CTTCAT-GAACGCCAATATAACATCTTGCATAG
gi|50438 : CATATGCAA-CAATTT-GC-TAACTA-CTCTCC-GAACGCCAATAT---ATCTTGCATAG
gi|50439 : CAAAGGCAG-CAATTT-AC-TAACTA-CTCCAC-TAACGCAAATATGATATCTTGCATAG
gi|50440 : CATAGGAGG-AAATGT-GT-TAATTA-CTCCC--GAACGCCATTATAACATCTCGCATAG
gi|50441 : CATAGGCAG-CAATTT-AC-TAACTA-CT-CCC-GAACGCCATTTAAACATCTTGC
gi|50442 : CATAGGC-G-TAATTT-AT-TAACTA-CTCAAG-GAACGCCAATATATTATCTCGCATAG
gi|50443 : CATTGGCAA-CAATTT-GT-TAACTT-TTCCCCCAAACGCAAGTATAACTTCTCGCATAG
gi|50444 : CATAGGCAG-CAATTG-AC-TAACTA-CTCCAC-GAACGCAAATTTATCATCTCACAT
gi|50445 : CATAGTCAG-AAATTT-AC-TAA-----TCACC-GAACGCCGGTATAACATCTCGCATA
gi|50446 : CATTGGTAG-CAATTT-AC-TAACTA-CTCCCG-AAACGCCAAT-T-ACATCTCACATAG
gi|50447 : CATAGGCAG-CAATTT-CA-AAAATA-CTTCAT-GAACGCCAACATAACATATTGTATAG
gi|50448 : CATAAGCAG-AAAAAT-AC-TAACTA-CTCCCG-AAACGCCAGAATAACATCTCGCAAAG
gi|50449 : CATAGACAA-CACTTT-GA-AAACTA-CTTCAA-GAACGCCATTATAACATATCACATAG
gi|50450 : CATCAACAG-CAATTT-AC-TCACGT-CTCCCT-AAACGCCAGTATAAC-TCTCGCATAG
gi|50451 : CATAAGCAG-CAATTT-GA-AATCTA-CTTCAC-GAACGCCAGTATAACAGCTAGCATA
gi|50452 : CATTGGCAA-CAATGT-GT-TAACTT-CTCCCCCAAACAACAGTATAACTTCTCGCATAG
gi|50453 : CATAGGCAG-CAATAT-CC-TTACCA-CTCTTG-CAACGACAGTACAACATCTCGCATAG
gi|50454 : ATAGACAG-CAATTT-AC-TGACTA-CTCCCC-AAACGCCAATATAACATTTTGCATAG
gi|50455 : ATAGGCAGACAATTG-AC-TAA-----TCCCC-GAACGCCAGTATAACATATCGCATAG
gi|50456 : ATGGGCAG-CAATTT-AC-TAACTA-TTCTAC-TAACGCCAGTATAACATCTTGCATAG
gi|50457 : ATAGGCAG-ACATTT-GA-AAACTA-CGTCAC-GAACGCCAATATAACATATCACATAG
gi|50458 : TAGGCAG-CAATTT-AC-TAACTA-TGCCCC-GAACGCCAGTATAACATATTGCATA
gi|50459 : TACGCCG-CAACTT-AC-TAACTT-GTCCCC-GAACGCCAATATAACATATCGCAT
gi|50460 : AGACAG-CAATCT-AC-TAACTT-CTCCCC-AAAAGCCAGTATATCACCTCGCATAG