lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 44444444444444444444444444444444444444444444444444444444444444444444444 2
lowQualScore : 00 00 0 00 00 11 777 0 3 55 0 00 7 1 1 1 44 333 333 33333333333333333333333333333333333333333333333333333333333333333333333 4 7 8 6
lowQualScore : .. .. . .. .. .. ... . . .. . .. . . . . .. ... ... ....................................................................... . . . .
lowQualScore : 66 66 4 55 55 00 444 4 4 77 8 77 7 1 3 1 99 777 777 00000000000000000000000000000000000000000000000000000000000000000000000 7 1 8 0
consensus : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--CAATATCTCG-TTTTCA-ATTATCTTA-ACTTCCATTCAT---C---TCAG-----------GAACA-AAAT-AA----A----------------A------------T------------TCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
Reference ( gi|19646 ) : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAATGCTCGT-GTATTCACGCAAAATCTCG--CAATGTCTCG-TTTTTA-ATTATCTTC-ACTTCCATTCAT---C---TCAG-----------G----------------A----------------A------------T------------TCTTACACTGCAGAAATGAAATTGTCATCGAAACAATACCAT
gi|19650 : ACCAAGGGATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--GT--G---T-GAACGCTGGC-GTATTCATGCAAATTCTTG--CAATATCTTG-TTTTTA-GTTATCTTA-ACTTCCATTCAT---C---TCAG-----------GAACACAAATCAA----A----------------A------------C------------TCTTACACTGCAG-AATGAAATTGTCATCAAAACAATACCAT
gi|19617 : ACCAAGGAATTATATA--GAGAAGGAAAGACAACTGAT--T-GAGAT--T--GA--G---T-GAACGCTCGC-GTATTCACGGAAAATCTCG--CAATATCTCG-TTTTTA-TTTATCTTA-ACGTCCATTTAT---C---TCAG-----------G----------------A----------------ATACAAATCAAACT------------TCTTACACTGCAG-AATGAAATTGTCACCAAAACAATACCAT
gi|19633 : ttACCAAAGAATTATATA--GAGAAGGAAGGGCAACTGAT--T-GAGAT--T--TT--A---T-GAACGCTCGC-GTATTCTCTCAAAATCTCG--CAGTATCTCG-TTTTCA-ATTATCTTA-ACTTCCATTCAT---C---TCAG-----------GAACGTGACAAATTAA-A----------------A------------T------------TCTTACATTGCAT-AATGAAATTCTCATCAAAACAATACCAT
gi|19595 : tACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--AG--G---T-GAATGCTGGC-ATATTCATGCAAGATCTCG--CAACATCCTG-TTTTTA-ATTAACTTA-ACTTCCATTCAT---C---TCAAATCT-------A----------------A----------------A------------T------------TCTTACATTGCAG-AATGAAATTCTCATCAAAACA
gi|19612 : tcatatctACCATGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-AAGAT--T--TT--G---T-GAACGCTTCT-GTATTCACTAAAAATCTGG--CATTATCTTG-TTTTCA-ACTCTCTTA-ACTTCCATTCAC---C---TCAG-----------G----------------A----------------A------------CACAAATCAAAACTCTTACATTGCAGAA-TGAAATTATCATCAAAACAATACCAT
gi|19623 : ttACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAATGATTGT-GTATTCA----------CG--CAATATCTCG-TTTTCA-ATTATCTTA-AATCCCATTCAT---C---TAAG-----------GAACACAAATCAA----A----------------A------------T------------TCTTACATTGCTG-AATGAAATTCTCATCAAAATAATACCAT
gi|19656 : tATCAAGGAATTATATA--GAGAAAGAAATGCAACTGAC--T-GAGAG--T--TT--C---T-AAACGCTCGC-ATATTCACGCAAAATCTCA-------------TTTTCA-ATCATCTTA-ACTTCCATTCAC---C---TCAT-----------G----------------ATCCAACACAAATTAAGA------------T------------TGTTACATTGCAGAAG-GAAATTCTCATCAAAACAATACCAT
gi|19624 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAATTAAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTTG--CAATATCTCG-TTTTCA-ATTGTCTT
gi|19655 : tACCAATGAATTATAAA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--GT--G---T-GAACGCTCGC-TTATTCACGCAAAATCTCA--CAATATCTCG-TTTTTA-ATTATCTTA-AATTCCAa
gi|19652 : ATCAAGGATTTCTATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAATATCTCG--CAATATCTTG-TTTTCA-ATTGTCTT
gi|19582 : ATCAAGACATTATATG--GAGAAGGAAATGCAACTGAT--T-TAAAT--T--TT--G---T-GAACGCTAGC-GTATTCACACAAAATCTCG--CAATATC---------A-A-TGTCTTTAACTTCCAATCAT---C---TCAG-----------G----------------A----------------A------------a
gi|19649 : ttttgttaatcctATCAAGGAATTATATT--GAGAAAGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-ATATTCACGCAAAATCTCG--CAATATaacaaacaaaa
gi|19654 : ATCAAGGAATTATATA--GTGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTTGC-ATATTCACGCAAAATCTCG--t
gi|19585 : ACCAAGGAATTAAATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--GT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--
gi|19659 : tttctatagcctaaATCAAGGAATTATAAA--GAGAAGGAAAGGCAACTGAC--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCATGCAAAATCT
gi|19644 : ATCAAGGAACTATATA--GAGAAGGAAAAGCAAATGAT--T-GAGGT--T--TT--G---C-GAACGCTCGC-GTATTCACGTAAAATCTTG--CAAT
gi|19575 : ATCAATGCATTATATA--GAGAAAGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAATGCTTGC-GTATTCACACAAAATCTTG--tact
gi|19631 : ttttttttaaaaatccaacccaaATCATGGAATTATATA--GAGAAGGAAATGCAACTGAT--T-GAGAG--T--TA--G---T-GAATGCTCGC-GTATTCACGCAAAATCTTG--
gi|19635 : tATCAAAGAATGATATA--GAGAAGGAATGGCAACTAAT--T-GAGAT--T--TT--G---T-GAATGCTCGC-GTTTTCACGCAAAATCTTG--
gi|19661 : tATCAAGGAATTATATA--GAGAAGAAAAAGTGACAGAT--T-GAGTT--T--TT--G---T-GAATGCTTGC-GTATTCACTTAAAGTCTCA--CAATATCTTG-T
gi|19648 : ACCAAAGAATTATATA--GAGAAGGAAAAGTAACTGAT--T-GAAAT--T--TT--G---T-GAGCGCTCGC-GTATTTACGCAAAATCTCG--
gi|19653 : ATCAAGGAATTATATA--GAGGAGGAAAGGCAACTGTT--T-GAGAT--T--GT--G---T-AAACGCTCGC-ATATTCACGCAAAATCTTG--t
gi|19651 : ACCAAGGAATTATATA--GGAAAGGAAAGGCAAATGGT--T-GAGAT--T--TT--G---T-GAACACTTGC-GTATTAACGCAAAATCT-------TGT-----TTTTTA-ATTATCTT
gi|19660 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GATAG--T--TT--G---T-GAACATTGGC-ATATTCACGCAAAATCTCG--
gi|19657 : ACCAAGGAAATATATA--GAGAAGGAAAAGCAACTGAT--T-GAGAT--T--TT--G---T-GAACACTCGC-GAATTCACGCAAAGTCTTG--
gi|19574 : ACCAAGGAATTATACA--GAGAAGGAAAGGCAACTGAT--T-GGGAT--T--TT--G---C-AAAAGCCCGC-TTATTCACGCAAAA------------TCTTG-TTTTCA-GTTATCTT
gi|19664 : tttattttgtattgtcatttcaATCAAGAAATTATAAA--GAGAAGGATAGGCAACTGGT--T-GATAG--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--aat
gi|19615 : ATTAAGGAATTATATA--GAGAAAGAAATGCAACTGAT--T-GACAG--T--TT--G---T-GAAAACTCGC-GTATTCACGCAAAATCTCG--
gi|19613 : ttACCAAGGACTTATATA--GTGAAGGAAAAGCAACTGAC--T-GAGAT--G--TT--A---T-GAATGCTTGT-GTATTCACGCAAAATCTTG--
gi|19579 : ttACCAAGGACTTATATA--GAAAAGGAAAAGCAACTGAT--T-GAGAT--T--TT--A---T-GAACGTTCGC-GTATTCACGCAAAACCTt
gi|19630 : ttttttctaagttacATCATGGAATTATATA--GAGAAGGAAAGGCAAATGAT--T-GGGAT--T--TT--G---T-GAACGCTCAC-GTATTCACGCTAAATATCagttttaaattttacacaatggaatactctacaaaatgagaccgt
gi|19616 : tACCAAGGGATTATATA--GAGAAGGAAAAACAACTGAT--G-GAAAA--T--TT--G---T-GAACGCTTGC-GTATTCGCGCAAAATCTCG--
gi|19662 : ttATCAATGACTTATATA--GAGTAGAAAAAGCAACTTAT--T-GAGAT--T--T---A---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--CGA
gi|19647 : ACCAAGGACGTATACA--GAGAAGGAAAAGCAACTGAT--T-GAGAT--G--TT--G---T-TAACGCTCGC-ATATTCATGCAATATCTCG--CGAattttt
gi|19663 : ACCAAGGACTTATATA--GAGAAGAAAAAGAAACTGAT--T-GAGAT--G--TT--A---T-CAATGTTTGC-GTATTCACCCAAAATCTCG--CGA
gi|19632 : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--GT--G---T-GAACGCTCGC-GTATT
gi|19596 : tATCAAGGACGTATATA--GAGAAGGAAAAGCAACTGAT--T-GAGAT--G--TT--A---T-GAATGCTTGC-GTTTTCATGTAATATCTCtgca
gi|19600 : ttataattattACCAAGGACTTATATA--GAGAAGGGAAAGCATGTGAT--T-AAGAT--G--TT--A---T-AGACGCTCGC-GTATTTACGCAAAATCTCG--CGAatga
gi|19665 : tatcgctttaaACCAAGGAATTATATA--GAAAAGGAAAGGCAAATGAT--T-GAGAT--T--TT--A---T-GAACACTCGC-ATATTCAC
gi|19636 : ATCAAGGACTTATATATAGAGAAGGAAAAGAAAATGAT--T-GAGATGTTAGTT--A---T-GAACGCTTGC-GTATTCACGCAAAATCTCA--CGA
gi|19629 : tACCAAGGAATTATATG--GAGAAGGAAAGGCATATGAT--T-GATA---T--TG--G---T-GAACGCTTGC-GTATTCACGCA
gi|19608 : tATCAAGGATTTATATA--AAGAAGGAAAAGCAACTCAA--T-GAG-------TT--GACAT-GAACGCTTGC-GTATTCACGC-ATATCTCG--CGA
gi|19569 : cttACCAAAGAATTATACT--GAGATGGAAAAGCAAGTGAT--T-GCGA---T--TT--G---T-AAAAGCTTGC-GTATTCACACAATATCTTG-----TG-----------A-ATTAT----------TATTGGC---C---TTA-------------------------------------------------------------------------CTT----TGCAG-AATGAAATTTTAAACAAAACAAGACCAT
gi|19572 : ttttttttatatcccttACCAACGAGTTATACT--GAGATGGAAAAGCAAGTGAT--T-GGGGT--T--TT--G---T-AAAAGCTTGC-ATATTCACACACTATCTTG--AAAT-------TTTTTA-ATGGCCTT----------------------------------------------------------------------------------------------------ACATTGCAGAAG-GAAATTTTAACCAAAACAAGACCAT
gi|19658 : tcttgtttatttcccttACCAAGGATTTATATT--GAATTGGAAAAGTAATTCAT--T-GAGAT--T--TT--G---T-GAAAACTTGC-ATATTCGCGCAAAATCT
gi|19573 : ACCAAAGAATTATACT--GAGATGGAAAAGTAAGTGAT--T-GGGGT--T--TT--G---T-AAAAGCTTGC-GTGTTCACACACTATCTTG--TGA------G-TTATTA-ATGGCCTT
gi|19571 : ttctttttatattccttACCAAAGAGTTATACT--GAGATGGAAAAACAACTAAT--TTGGG----T--TT--G---T-AAAAGCTTGC-GTATTCACACACTATCTacgttacataacaaaacaagaccat
gi|19601 : ttttttttctatcccttTCAAGGAATTATATA--AAGAAGGAAAGGCAACTGAT--T-GATAT--T--TT--G---T-GAACGCTCGT-GTATTCACGCAAAATCTTG--CAATATCTCG-TTTTTA-ATTATCTTtatgagttattaatgtcctgacgttgcagaagaaaatttgaaacaaaacaagaccat
gi|19607 : tatctttgTCAAGGACTTATATA--AAGAAGGAAAAGCAACTGAT--T-GAGAT--G--TT--A---T-GAACACTCGC-GTATTCACGCAAAATCTGG--CGAa
gi|19696 : cttaagCAAGGAATTATATA--GAGAAGGAAATGCATCTGAT--T-CGGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--CAATATCTCG-TTTTCA-ATTATTTTA-ACTTCCATTTAT---C---CCAG-----------GAATATAAATCAA----A----------------A------------T------------TCTTACATTGCAG-AATGAAATTTTCATCAAAACAATACCATatt
gi|19698 : CAAGGAATTATAGA--GAGAAGGAAAGGCACTTGAT--T-GAGAG--T--TT--G---T-GAACGCTCGC-GTATTCATGCAAAATCTCG--CAATATCTCGTTTTTTA-ATTATCTTA-ACTTCCTTTCAC---C---TCAG-----------GAACACAAATCAA----A----------------A------------T------------TCTTACATTGCAG-AACAAAATTCTCATCAAAACAATACCAT
gi|19622 : CAAGGAATTATATA--GAGATGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GACCGCTTAC-GTATTCGCACAAAATCTCG--CAATATCTTG-TTTTCA-GTTATCTTA-ACTTCCATTCATATACATATCA------------A----------------A----------------A------------T------------TCTTACATTGCAG-AATGAAATTGTAATCAAAACAATACCA
gi|19689 : tgcCAAGGAATTATATA--GAGAAGGAAATGCAACTGAT--T-GAGAT--T--TT--G---T-GAAAGCTCGC-ATTTTCACGCAAAA------------TTTTG-TTTTCA-ATTATCTTC-ACTTTCATTCAT---C---CCAG-----------GCAGGAACATTAATCAAA----------------A------------T------------TCTTACATTGCA-AAAGGAAATTGTCATCAAAACAATACCAT
gi|19628 : CAAGGAATTACAAA--GAGAGGAAAAGGCAACTGAT--T-GGGAT--T--TT--G---T-GAACGCTTGC-GTATTCGCACATAATTTCG--CAATATCTCG-TTTTCA-ATTATCTTT-ACTAACATTCAT---C---TCAG-----------G----------------A----------------A------------CACAAATCAATGATCTTACATTGCAG-AATGAAATTCTAGTCAAAACAA
gi|19692 : tagCAAGGAATTATACA--GAGAAGGAAAGGTAGCTGAT--T-GAGAT--T--TT--G---T-AAACGCTTGC-ATATTCACACAAAATCTCA--CACTATCTCG-TTTACA-ATCAT------CTTCCATTAGT---C---TCGG-----------GAACAAAAATCAA----A----------------A------------T------------TCTTACTTTGCAG-AATAAAATTACCATCAAAACAACACCAT
gi|19704 : CAAGGATTTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--A---T-GAACGCTCGC-GTATTCACGCAAAACCTCG--CAAAATCTCG-TTTTCA-ATAATCTT
gi|19697 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-AAACGCTCTT-GTATTTACACAAAATCTCA--CCATATCTCG-TTTTCA-ATGATCTTa
gi|19679 : CAAGGAATTATATA--GAGAAAGAAAGGCAACTGAT--C-GAGAT--T--TG--G---T-GAACGCTCGT-GTATTCACGAAATAGCTTG--CAATATCTCG-TTTTCA-ATTGTCTTa
gi|19686 : cCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--a
gi|19690 : CAAGGGATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--
gi|19594 : CAAGGAATTATATA--GAGAAGGAAAGACAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCAC-ATATTCACGCAAGA------------TCTTG-TTTTTA-ATTATCTTA-CCTTTCAt
gi|19702 : ttacattttagCAAGGAATTATATA--AAGAAGGAAAGGCAACTGAT--T-GATAT--T--TT--G---T-GAACGCTCGT-GTATTCACGCAAAATCTCG--
gi|19578 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGTTTGT-GTATTTACACAAAA------------TCTCG-TTTTTA-ATTATCTT
gi|19598 : tttttttaatggatgactagCAAGGAATTATATA--AAGAAGGAAAGGTAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTCG--a
gi|19627 : tatgttgctcaagcCAAGGAATTATATA--GAGAAGGAAAGACAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACGCAAAATCTTG--
gi|19678 : taaCAAGGAATTATATA--GAGAAGGAAATGCATCTGAT--T-GAGAT--T--TT--G---T-GAATGCTCGC-GTATTCACACAAAATCTCG--CGA
gi|19703 : cCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAATGCCCAC-TTATTCACGCAAAATCTCG--
gi|19625 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCTT-GTATTTACACAAAATCTCG--
gi|19695 : tagCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTTGC-ATATTGACGCAAAATCTCG--
gi|19634 : CAAGGAATTATATA--GAAAAGGAAAGGCAACTGAT--T-GGGAT--T--TT--G---T-GAATGTTCAT-GTATTTACACAAAATCTCG--
gi|19611 : tagCAAGGATTTATATA--GAGACGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACACTCGC-GTATTCACGCAAAATCTTG--
gi|19603 : ttagCAAGGAATTATATA--GTGAAGGAAATACAACTGAT--T-GAGAG--T--TT--G---T-GAACGTTTGT-GTATTCATGCAAAATCTCG--CAATAT
gi|19694 : cccttaaCAAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--T---T-GAAAGCTTAT-GTATTTACACAAAATCTCG--t
gi|19705 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGAC--T-GAGAT--T--AT--G---T-GAACACTCGC-ATATTCATGCAAAATCTCG--
gi|19576 : CAAGGAATTATATA--CAGAAGGAAAGGCAACTGAC--T-GAGAT--T--GT--G---T-GAACGCTTGC-GTATTCACGCAAAATCT
gi|19610 : tttcttggttataaccagttcCAAGGAATTATATA--GAGATGGATAGGCAACTGAT--T-GAGCT--T--TT--G---T-GAATGCTTGT-GTATTCACGCATAATCT
gi|19701 : ttaaCAACGAATTATATA--AAGAAGGAAAGACAACTGAT--T-GAGAT--T--GT--G---T-GAACGCTCGC-GTATTGACGC-ATATCTCG--CAAT
gi|19688 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGAT--T-GACAG--T--TT--G---T-GAACACTCGC-ATATTCACGCAAAATCTtatcttaat
gi|19691 : CAAAGAATTATATA--GAAAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACAC
gi|19700 : CAAGGAATTATATA--GAGAAGGAAAGGCAAATGAT--T-AAGAT--T--TT--G---T-GAATGCTCAC-ATATTCACGCA
gi|19577 : CAAGAAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGTT--T--TA--G---T-GAACGTTTGT-GTATTTACACACAATCTCG--
gi|19687 : tttttttaatggatgactagCAAGGAATTATATA--GAGAAGGAAAGGCAATGGAG--T-GAGGT--T--TT--G---T-AAACGCTTGC-ATATTCACGCAAAATCTTG--
gi|19676 : CAAGGAATTGTATA--GAGGAGGAAAGGTAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-GTATTCACTCA
gi|19699 : cCAAGGATTTATACA--GAGGAGAAAAGGCAACTGTT--T-GAGAT--T--GT--G---T-GAACGCTCGC-GTATTCACGCAATATCT
gi|19614 : CAAAGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGGT--T--TT--G---T-GAACACTCCC-GTATTCA
gi|19605 : ttaCAAGGAATTATATA--GAGACGGAAACGCAAATGTT--T-GAGAG--T--TT--T---TAGAACACTCAT-GTATTCACGCACAATCTCG--
gi|19718 : ccttaAAGGAATTATATA--GAGAAGGAAATACAACTGAT--T-GACAG--T--TT--G---T-GAATGCTCTC-GTATTCA----------CG--CAATATCTCG-TTTTCA-ATTATTGTG-ACTTCCATTCAC---C---TCAG-----------GAACACAAATAAA----A----------------A------------T------------TCTTTCATTGCAG-AATGAAATTCTCATCAAAACAATACCGT
gi|19719 : AAGGAATTATATA--GAGAAGGAAATGCAATTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-ATATTCACGCAAAATCTCG--CAATATCTCG-TTTTTA-ATTATCTT
gi|19677 : AAGGAATTATATA--GAGAAGGAAAGGCAATTGAT--T-GAGAT--A--TT--G---T-GAACGTTCGC-ATATTCACACAAAATCTTG--TAATATCTTG-TTTTCA-ATTATCTTa
gi|19645 : ctAAGGAATTATATA--GAGAAGGAAAGGCAAATGAT--T-GAGAT--T--TT--A---T-GAACGCTTGC-ATATTCACGCAAAATCTTG--a
gi|19693 : acaAATGACTTGTATA--GAGACTGAAAAGCAACTGAT--T-GAGAT--G--TT--A---T-GAACGCTTGT-GTATTCACACAAAATCT
gi|19606 : caAGGAATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACGCTCGC-ATATTCACGCAAAATCTCG--tatga
gi|19597 : cttactAGGAATTACATA--GAGAAGGAATGGCAAATGAT--T-GAGAT-------------T-GAACGATCGC-ATATTCACTCAAAATCTCA--CACTATCTTG-TTCTAACATTA
gi|19588 : tacatgtcttatAGGAATTATATA--GAGAAGAAAAAGCAATTGAT--T-GAGGT--G--TT--A-----GAATGATCGC-ATATCCACGCAAAATCTCG--cagaatgaaattctcatcaaaacaataccat
gi|19724 : tttgtctgtctaacccGAATTATATA--GAGAAGAAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAACACTCGC-ATATTCACACAAAA------------TCTCG-TTTTCA-GTTATCTTA-ATGTCCATTCAT---C---TCAGAACACAAATCAA----------------A----------------A------------T------------GCTTACATTGCAG-AATGAAATTCTAATTAAAACAATACCATtga
gi|19726 : GAATTATATA--GAGAAGGAAAAGCAACTTAT--T-GAGAT--T--TT--G---T-AAA-GCTTGCAATATTCATGCAAAATCTCA--CAAAATATTT-TTTTCA-ATTATCTGA-ACTTCCAACCAT---C---TCAA-----------GAATACAAATTAA----A----------------A------------T------------TCTTACTTTGCAG-AATGAAATTCTCAACAAAACAAGACC
gi|19725 : GAATTATAAA--GAAAAGGAAAGGCAACTGAT--T-AAGAT--T--TT--G---T-GAAAGCTCGT-GTATTCACGCAAAATCTCG--
gi|19729 : AATTATATA--GAGAAGGAAAGGCAACTGAT--T-GAGAT--T--TT--G---T-GAAAGCTAGC-GTATTCACACAAAATCTCA--CAATATCTCG-TTTTTA-ATTATCTTC-AC
gi|19724 : AAGATAACTGAAAAC-GAGAT--T--TT--GTG-T-GAATATGCGA-GTGTTCA--CAAAATCTCactgcgg
gi|19696 : gaattatatagagaagaaaaggcaactgatt-GAGAT--T--TTGCG---T-GAATACGCGA-GCGTTCA--CAAAATCaatgtccattcatctcagaacacaaatcaaaatgcttacattgcagaatgaaattctaattaaaacaataccat
gi|19719 : caaggaattatatagagaaggaaatgcatctgattcg-GAGAT--T--TT--GCG-T-GAATATGCGA-GCGTTCAC--AAAATCTCAATCAATgcaatatctcgttttcaattattttaacttccatttatcccaggaatataaatcaaaattcttacattgcagaatgaaattttcatcaaaacaataccat
gi|19686 : aaggaattatatagagaaggaaatgca-GAGAT--T--TT--GCG-T-GAATACGCGA-GCGTTCAC--AAAATCTCgcaatatctcgtttttaattatctta
gi|19649 : caaggaattatatagagaaggaaaggcaactgatt-GAGAT--T--TT--GCG-T-GAATATGCGA-GCGTTCAC--AAAATCTCg
gi|19690 : atcaaggaattatattgagaaagaaaggcaactgatt-GAGAT--T--TT--GCG-T-GAATACGCGA-GCGTTCAC--AAAATCTCgcaatatt
gi|19598 : caagggattatatagagaaggaaaggcaactgatt-GAGAT--T--TT--GCG-T-GAATACGCGA-GCGTTCAC--AAAATCTCgt
gi|19606 : tatgttgctcaagccaaggaattatataaagaaggaaaggtaactgatt-GAGAT--T--TT--GCG-T-GAATATGCGA-GCGTTCAC--AAAATCTCg
gi|19678 : cttactaggaattatatagagaaggaaaggcaactgatt-GAGAT--T--TT--GTG-T-GAATACGCGA-GCATTCA--CAAAATCTCg
gi|19585 : ccaaggaattatatagagaaggaaatgcatctgatt-GAGAT--T--TTGCG---T-GAATACGCGA-GCGTTCACAC--AATCTCgcga
gi|19627 : tttctatagcctaaaccaaggaattaaatagagaaggaaaggcaactgattAGAT--T--TT--GCG-T-GAATACGCGA-GCGTTCAC--AAAATCTCg
gi|19659 : taacaaggaattatatagagaaggaaagacaactgattAGAT--T--TT--GCA-T-GAATACGCGA-GCGTTCAC--AAAATCTCtg
gi|19611 : atcaaggaattataaagagaaggaaaggcaactgactAGAT--T--TT--GCG-T-GAATACGCGA-GTGTTCAC--AAAATCTC
gi|19575 : ttagcaaggatttatatagagacggaaaggcaactgattAGAT--T--TT--GTG-T-GAATACGCAA-GCATTCA--CAAAATCTCtg
gi|19635 : ttttttttaaaaatccaacccaaatcaatgcattatatagagaaagaaaggcaactgattAGAT--T--TT--GCG-T-GAAAACGCGA-GCATTCAC--AAAATCTCtg
gi|19657 : tatcaaagaatgatatagagaaggaatggcaactaattAGAC--T--TT--GCG-T-GAATTCGCGA-GTGTTCAC--AAAATCTCtg
gi|19597 : accaaggaaatatatagagaaggaaaagcaactgattCAGAA-TGAAATTCTCATCAAAACAATACCATtg
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|19570 ): TTTTTTTTATATTCCTTACCAATGATTTATACTGAGATGGAAAAGCAAGTGATTTGGGTTTGTAAAAGCTTGCATATTGACACACTATCTTGTGTGTTATTAATGGCCTTGCGTTGCAAAAGGAAATTTTAAACAAAACAAGACCAT
Alignments
lowQualScore : 11111111111 22 1
lowQualScore : 00 0 00 00 000 0 0 0 1 1 66666666666 00 22 3 1 22 1 2
lowQualScore : .. . .. .. ... . . . . . ........... .. .. . . .. . .
lowQualScore : 66 4 66 66 777 4 4 8 1 1 88888888888 88 66 3 9 99 8 7
consensus : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCG-TTTTCAATTATC-TTAACTTCCATTCATCTCAGG----A------ACAC-AAA--T-A-AAAT--TCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
Reference ( family-207 ) : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCG-TTTTCAATTATC-TTAACTTCCATTCATCTCAGG----A------ACA--AAA--T-A-AAAT--TCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
gi|19569 : ACCAAAGAATTATACT--GAGATGGAAAAGCAAGTGATT-GCGA---T--TTG---T-AAAAGCTTGC-GTATTCACACAATATCTTG
gi|19569 : ttttttttatatcccttCTTACTTTGCAG-AATGAAATTTTAAACAAAACAAGACCATtgaattattattggccttactttgcagaatgaaattttaaacaaaacaagaccat
gi|19570 : ttttttttatatcccttaccaaagaattatactgagatggaaaagcaagtgattgcgatttgtaaaagcttgcgtattcacacaatatcttgtgaattattattggcCTTGCGTTGCAA-AAGGAAATTTTAAACAAAACAAGACCAT
gi|19571 : ttttttttatattccttaccaatgatttatactgagatggaaaagcaagtgatttgggtttgtaaaagcttgcatattgacacactatcttgtgtgttattaatggcACCAAAGAGTTATACT--GAGATGGAAAAACAACTAATTTGGG----T--TTG---T-AAAAGCTTGC-GTATTCACACACTATCT
gi|19571 : ttttttttctatccctt--T-A-ATGT--CCTGACGTTGCAG-AAGAAAATTTGAAACAAAACAAGACCATtatgagttattaatgtcctgacgttgcagaagaaaatttgaaacaaaacaagaccat
gi|19572 : ttttttttctatcccttaccaaagagttatactgagatggaaaaacaactaatttgggtttgtaaaagcttgcgtattcacacactatcttatgagttatACCAACGAGTTATACT--GAGATGGAAAAGCAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-ATATTCACACACTATCTTGAAA-T-------TTTTTAATGGCC-TTA
gi|19572 : tcttgtttatttcccttCTTACATTGCAG-AAGGAAATTTTAACCAAAACAAGACCATcattgcagaaggaaattttaaccaaaacaagaccat
gi|19573 : tcttgtttatttcccttaccaacgagttatactgagatggaaaagcaagtgattggggttttgtaaaagcttgcatattcacacactatcttgaaattttttaatggcACCAAAGAATTATACT--GAGATGGAAAAGTAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-GTGTTCACACACTATCTTGTGA-------G-TTATTAATGGCC-TTACGTTACAT--------------A------ACA--AAA--C-A-AGA
gi|19574 : ttctttttatattccttACCAAGGAATTATACA--GAGAAGGAAAGGCAACTGATT-GGGAT--T--TTG---C-AAAAGCCCGC-TTATTCACGCAAA-----------ATCTTG-TTTTCAGTTATC-TTAAccat
gi|19575 : tttattttgtattgtcatttcaATCAATGCATTATATA--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTTGC-GTATTCACACAAAATCTTGt
gi|19576 : ttttttttaaaaatccaacccaaCCAAGGAATTATATA--CAGAAGGAAAGGCAACTGACT-GAGAT--T--GTG---T-GAACGCTTGC-GTATTCACGCAAAATCT
gi|19577 : tttcttggttataaccagttCAAGAAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGTT--T--TAG---T-GAACGTTTGT-GTATTTACACACAATCTCG
gi|19578 : tttttttaatggatgactagCAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAACGTTTGT-GTATTTACACAAA-----------ATCTCG-TTTTTAATTATC-TTA
gi|19579 : tttttttaatggatgactagACCAAGGACTTATATA--GAAAAGGAAAAGCAACTGATT-GAGAT--T--TTA---T-GAACGTTCGC-GTATTCACGCAAAACCT
gi|19582 : ttttttctaagttacATCAAGACATTATATG--GAGAAGGAAATGCAACTGATT-TAAAT--T--TTG---T-GAACGCTAGC-GTATTCACACAAAATCTCGCAA-TA---------TCAA-TGTCTTTAACTTCCAATCATCTCAGG----A------AAAC-AAA--C-A-AAAagttttaaattttacacaatggaatactctacaaaatgagaccgt
gi|19585 : ttttgttaatcctACCAAGGAATTAAATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19588 : tttctatagcctaaACCCAGGAATTATATA--GAGAAGAAAAAGCAATTGATT-GAGGT--G--TTA-----GAATGATCGC-ATATCCACGCAAAATCTCG
gi|19594 : tttgtctgtctaCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCAC-ATATTCACGCAAG-----------ATCTTG-TTTTTAATTATC-TTACCTTTCAtga
gi|19595 : ttacattttagACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--AGG---T-GAATGCTGGC-ATATTCATGCAAGATCTCGCAA-CATCCTG-TTTTTAATTAAC-TTAACTTCCATTCATCTC-------------------AAA--T-CTAAAT--TCTTACATTGCAG-AATGAAATTCTCATCAAAACA
gi|19596 : tcatatctATCAAGGACGTATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAATGCTTGC-GTTTTCATGTAATATCTC
gi|19597 : ttataattattAGGAATTACATA--GAGAAGGAATGGCAAATGATT-GAGAT-----------T-GAACGATCGC-ATATTCACTCAAAATCTCACAC-TATCTTG-TTCT-AA--------------CATT--------------------ACA--GAA--T-G-AAAT--TCT----------------------CATCAAAACAATACCATatga
gi|19598 : tacatgtcttatCCAAGGAATTATATA--AAGAAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19600 : tatgttgctcaagACCAAGGACTTATATA--GAGAAGGGAAAGCATGTGATT-AAGAT--G--TTA---T-AGACGCTCGC-GTATTTACGCAAAATCTCGCGA-
gi|19601 : tatcgctttaaCAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTTGCAA-TATCTCG-TTTTTAATTATC-TTA
gi|19603 : tatctttgtCAAGGAATTATATA--GTGAAGGAAATACAACTGATT-GAGAG--T--TTG---T-GAACGTTTGT-GTATTCATGCAAAATCTCGCAA-TAT
gi|19605 : cccttaaCAAGGAATTATATA--GAGACGGAAACGCAAATGTTT-GAGAG--T--TTT---TAGAACACTCAT-GTATTCACGCACAATCTCGt
gi|19606 : ccttaAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCG
gi|19607 : cttactCAAGGACTTATATA--AAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACACTCGC-GTATTCACGCAAAATCTGGCGA-
gi|19608 : cttaagtATCAAGGATTTATATA--AAGAAGGAAAAGCAACTCAAT-GAG-------TTGACAT-GAACGCTTGC-GTATTCACGC-ATATCTCGCGA-att
gi|19610 : cttCAAGGAATTATATA--GAGATGGATAGGCAACTGATT-GAGCT--T--TTG---T-GAATGCTTGT-GTATTCACGCATAATCT
gi|19611 : ttaaCAAGGATTTATATA--GAGACGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GTATTCACGCAAAATCTTG
gi|19612 : ttagACCATGGAATTATATA--GAGAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAACGCTTCT-GTATTCACTAAAAATCTGGCAT-TATCTTG-TTTTCAACTCTC-TTAACTTCCATTCACCTCAGG----A------ACAC-AAA--TCA-AAAC--TCTTACATTGCAG-AATGAAATTATCATCAAAACAATACCAT
gi|19613 : ttACCAAGGACTTATATA--GTGAAGGAAAAGCAACTGACT-GAGAT--G--TTA---T-GAATGCTTGT-GTATTCACGCAAAATCTTG
gi|19614 : ttCAAAGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGGT--T--TTG---T-GAACACTCCC-GTATTCAt
gi|19615 : ttaAAGGAATTATATA--GAGAAAGAAATGCAACTGATT-GACAG--T--TTG---T-GAAAACTCGC-GTATTCACGCAAAATCTCG
gi|19616 : ttattACCAAGGGATTATATA--GAGAAGGAAAAACAACTGATG-GAAAA--T--TTG---T-GAACGCTTGC-GTATTCGCGCAAAATCTCG
gi|19617 : ttACCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--GAG---T-GAACGCTCGC-GTATTCACGGAAAATCTCGCAA-TATCTCG-TTTTTATTTATC-TTAACGTCCATTTATCTCAGG----A------ATAC-AAA--TCA-AACT--TCTTACACTGCAG-AATGAAATTGTCACCAAAACAATACCAT
gi|19622 : ttCCAAGGAATTATATA--GAGATGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GACCGCTTAC-GTATTCGCACAAAATCTCGCAA-TATCTTG-TTTTCAGTTATC-TTAACTTCCATTCATAT---------------ACA--TAT--C-A-AAAT--TCTTACATTGCAG-AATGAAATTGTAATCAAAACAATACCA
gi|19623 : tgACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGATTGT-GTATTCACGCAA-----------TATCTCG-TTTTCAATTATC-TTAAATCCCATTCATCTAAGG----A------ACAC-AAA--TCA-AAAT--TCTTACATTGCTG-AATGAAATTCTCATCAAAATAATACCAT
gi|19624 : tATCAAGGAATTATATA--GAGAAGGAAAGGCAATTAATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTGCAA-TATCTCG-TTTTCAATTGTC-TTA
gi|19625 : tCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCTT-GTATTTACACAAAATCTCG
gi|19627 : tagCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTG
gi|19628 : taaCAAGGAATTACAAA--GAGAGGAAAAGGCAACTGATT-GGGAT--T--TTG---T-GAACGCTTGC-GTATTCGCACATAATTTCGCAA-TATCTCG-TTTTCAATTATC-TTTACTAACATTCATCTCAGG----A------ACAC-AAA--T---CAATGATCTTACATTGCAG-AATGAAATTCTAGTCAAAACAA
gi|19629 : tagACCAAGGAATTATATG--GAGAAGGAAAGGCATATGATT-GATA---T--TGG---T-GAACGCTTGC-GTATTCACGCA
gi|19630 : tATCATGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GGGAT--T--TTG---T-GAACGCTCAC-GTATTCACGCTAAATATC
gi|19631 : tATCATGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAG--T--TAG---T-GAATGCTCGC-GTATTCACGCAAAATCTTG
gi|19632 : tACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATT
gi|19633 : tACCAAAGAATTATATA--GAGAAGGAAGGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCTCTCAAAATCTCGCAG-TATCTCG-TTTTCAATTATC-TTAACTTCCATTCATCTCAGG----AACGTG-ACA--AAT--T-A-AAAT--TCTTACATTGCAT-AATGAAATTCTCATCAAAACAATACCATtgca
gi|19634 : tCAAGGAATTATATA--GAAAAGGAAAGGCAACTGATT-GGGAT--T--TTG---T-GAATGTTCAT-GTATTTACACAAAATCTCG
gi|19635 : tagATCAAAGAATGATATA--GAGAAGGAATGGCAACTAATT-GAGAT--T--TTG---T-GAATGCTCGC-GTTTTCACGCAAAATCTTG
gi|19636 : tATCAAGGACTTATATATAGAGAAGGAAAAGAAAATGATT-GAGATGTTAGTTA---T-GAACGCTTGC-GTATTCACGCAAAATCTCACGA-
gi|19644 : tATCAAGGAACTATATA--GAGAAGGAAAAGCAAATGATT-GAGGT--T--TTG---C-GAACGCTCGC-GTATTCACGTAAAATCTTGCAA-T
gi|19645 : ACAAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACGCTTGC-ATATTCACGCAAAATCTTGtact
gi|19646 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTCGT-GTATTCACGCAAAATCTCGCAA-TGTCTCG-TTTTTAATTATC-TTCACTTCCATTCATCTCAGG--------------------------AAT--TCTTACACTGCAGAAATGAAATTGTCATCGAAACAATACCAT
gi|19647 : ACCAAGGACGTATACA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTG---T-TAACGCTCGC-ATATTCATGCAATATCTCGCGA-
gi|19648 : ACCAAAGAATTATATA--GAGAAGGAAAAGTAACTGATT-GAAAT--T--TTG---T-GAGCGCTCGC-GTATTTACGCAAAATCTCG
gi|19649 : ATCAAGGAATTATATT--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATt
gi|19650 : ACCAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTGGC-GTATTCATGCAAATTCTTGCAA-TATCTTG-TTTTTAGTTATC-TTAACTTCCATTCATCTCAGG----A------ACAC-AAA--TCA-AAAC--TCTTACACTGCAG-AATGAAATTGTCATCAAAACAATACCATt
gi|19651 : ACCAAGGAATTATATA--GGAAAGGAAAGGCAAATGGTT-GAGAT--T--TTG---T-GAACACTTGC-GTATTAACGCAAAATCTTGT-----------TTTTTAATTATC-TT
gi|19652 : ATCAAGGATTTCTATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAATATCTCGCAA-TATCTTG-TTTTCAATTGTC-TTA
gi|19653 : ATCAAGGAATTATATA--GAGGAGGAAAGGCAACTGTTT-GAGAT--T--GTG---T-AAACGCTCGC-ATATTCACGCAAAATCTTG
gi|19654 : ATCAAGGAATTATATA--GTGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTCACGCAAAATCTCG
gi|19655 : ACCAATGAATTATAAA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-TTATTCACGCAAAATCTCACAA-TATCTCG-TTTTTAATTATC-TTAAATTCCA
gi|19656 : ATCAAGGAATTATATA--GAGAAAGAAATGCAACTGACT-GAGAG--T--TTC---T-AAACGCTCGC-ATATTCACGCAAA-----------ATCTCA-TTTTCAATCATC-TTAACTTCCATTCACCTCATG----ATCCAACACA--AAT--T-A-AGAT--TGTTACATTGCAG-AAGGAAATTCTCATCAAAACAATACCAT
gi|19657 : ACCAAGGAAATATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GAATTCACGCAAAGTCTTG
gi|19658 : ACCAAGGATTTATATT--GAATTGGAAAAGTAATTCATT-GAGAT--T--TTG---T-GAAAACTTGC-ATATTCGCGCAAAATCT
gi|19659 : ATCAAGGAATTATAAA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCT
gi|19660 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GATAG--T--TTG---T-GAACATTGGC-ATATTCACGCAAAATCTCG
gi|19661 : ATCAAGGAATTATATA--GAGAAGAAAAAGTGACAGATT-GAGTT--T--TTG---T-GAATGCTTGC-GTATTCACTTAAAGTCTCACAA-TATCTTG-T
gi|19662 : ATCAATGACTTATATA--GAGTAGAAAAAGCAACTTATT-GAGAT--T--T-A---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCGA-
gi|19663 : ACCAAGGACTTATATA--GAGAAGAAAAAGAAACTGATT-GAGAT--G--TTA---T-CAATGTTTGC-GTATTCACCCAAAATCTCGCGA-attttt
gi|19664 : ATCAAGAAATTATAAA--GAGAAGGATAGGCAACTGGTT-GATAG--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19665 : ACCAAGGAATTATATA--GAAAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACACTCGC-ATATTCAC
gi|19676 : CCAAGGAATTGTATA--GAGGAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACTCA
gi|19677 : CTAAGGAATTATATA--GAGAAGGAAAGGCAATTGATT-GAGAT--A--TTG---T-GAACGTTCGC-ATATTCACACAAAATCTTGTAA-TATCTTG-TTTTCAATTATC-TTA
gi|19678 : CCAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-GAGAT--T--TTG---T-GAATGCTCGC-GTATTCACACAAAATCTCGCGA-
gi|19679 : CCAAGGAATTATATA--GAGAAAGAAAGGCAACTGATC-GAGAT--T--TGG---T-GAACGCTCGT-GTATTCACGAAATAGCTTGCAA-TATCTCG-TTTTCAATTGTC-TTA
gi|19686 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19687 : CAAGGAATTATATA--GAGAAGGAAAGGCAATGGAGT-GAGGT--T--TTG---T-AAACGCTTGC-ATATTCACGCAAAATCTTG
gi|19688 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GACAG--T--TTG---T-GAACACTCGC-ATATTCACGCAAAATCT
gi|19689 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTCGC-ATTTTCACGCAAAATTTTG------------TTTTCAATTATC-TTCACTTTCATTCATCCCAGGCAGGA------ACATTAAT--C-A-AAAT--TCTTACATTGCAA-AAGGAAATTGTCATCAAAACAATACCAT
gi|19690 : CAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19691 : CAAAGAATTATATA--GAAAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACACt
gi|19692 : CAAGGAATTATACA--GAGAAGGAAAGGTAGCTGATT-GAGAT--T--TTG---T-AAACGCTTGC-ATATTCACACAAAATCTCACAC-TATCTCG-TTTACAATCAT------CTTCCATTAGTCTCGGG----A------ACA--AAAATC-A-AAAT--TCTTACTTTGCAG-AATAAAATTACCATCAAAACAACACCAT
gi|19693 : AATGACTTGTATA--GAGACTGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACGCTTGT-GTATTCACACAAAATCT
gi|19694 : caCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTT---T-GAAAGCTTAT-GTATTTACACAAAATCTCGtatga
gi|19695 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTGACGCAAAATCTCG
gi|19696 : CAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-CGGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCG-TTTTCAATTATT-TTAACTTCCATTTATCCCAGG----A------ATAT-AAA--TCA-AAAT--TCTTACATTGCAG-AATGAAATTTTCATCAAAACAATACCAT
gi|19697 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-AAACGCTCTT-GTATTTACACAAAATCTCACCA-TATCTCG-TTTTCAATGATC-TTA
gi|19698 : CAAGGAATTATAGA--GAGAAGGAAAGGCACTTGATT-GAGAG--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCTCGCAA-TATCTCGTTTTTTAATTATC-TTAACTTCCTTTCACCTCAGG----A------ACAC-AAA--TCA-AAAT--TCTTACATTGCAG-AACAAAATTCTCATCAAAACAATACCAT
gi|19699 : CAAGGATTTATACA--GAGGAGAAAAGGCAACTGTTT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAATATCT
gi|19700 : CAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-AAGAT--T--TTG---T-GAATGCTCAC-ATATTCACGCA
gi|19701 : CAACGAATTATATA--AAGAAGGAAAGACAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTGACGC-ATATCTCGCAATTATCT
gi|19702 : CAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTCGtaat
gi|19703 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCCCAC-TTATTCACGCAAAATCTCG
gi|19704 : CAAGGATTTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCACGCAAAACCTCGCAA-AATCTCG-TTTTCAATAATC-TTA
gi|19705 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--ATG---T-GAACACTCGC-ATATTCATGCAAAATCTCG
gi|19718 : AAGGAATTATATA--GAGAAGGAAATACAACTGATT-GACAG--T--TTG---T-GAATGCTCTC-GTATTCA----------CGCAA-TATCTCG-TTTTCAATTATT-GTGACTTCCATTCACCTCAGG----A------ACAC-AAA--TAA-AAAT--TCTTTCATTGCAG-AATGAAATTCTCATCAAAACAATACCGT
gi|19719 : AAGGAATTATATA--GAGAAGGAAATGCAATTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATCTCG-TTTTTAATTATC-TTA
gi|19724 : GAATTATATA--GAGAAGAAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-ATATTCACACAAA-----------ATCTCG-TTTTCAGTTATC-TTAATGTCCATTCATCTCAGA----AC-----ACA--AAT--C-A-AAAT--GCTTACATTGCAG-AATGAAATTCTAATTAAAACAATACCAT
gi|19725 : GAATTATAAA--GAAAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAAAGCTCGT-GTATTCACGCAAAATCTCG
gi|19726 : GAATTATATA--GAGAAGGAAAAGCAACTTATT-GAGAT--T--TTG---T-AAA-GCTTGCAATATTCATGCAAAATCTCACAA-AATATTT-TTTTCAATTATC-TGAACTTCCAACCATCTCAAG----AAT----ACA--AAT--T-A-AAAT--TCTTACTTTGCAG-AATGAAATTCTCAACAAAACAAGACC
gi|19729 : AATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTAGC-GTATTCACACAAAATCTCACAA-TATCTCG-TTTTTAATTATC-TTCAC
Alignments
lowQualScore : 2
lowQualScore : 00 0 00 00 000 0 0 0 1 1 1 9999 333 6 3 2 22 1 1
lowQualScore : .. . .. .. ... . . . . . . .... ... . . . .. . .
lowQualScore : 66 4 66 66 777 4 4 9 1 2 2 4444 999 3 2 1 99 8 6
consensus : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCG-TTTTCA-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAA-TCA-AAAT--TCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
Reference ( family-207 ) : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCG-TTTTCA-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAA-T-A-AAAT--TCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
gi|19569 : ACCAAAGAATTATACT--GAGATGGAAAAGCAAGTGATT-GCGA---T--TTG---T-AAAAGCTTGC-GTATTCACACAATATCTTG
gi|19569 : ttttttttatatcccttCTTACTTTGCAG-AATGAAATTTTAAACAAAACAAGACCATtgaattattattggccttactttgcagaatgaaattttaaacaaaacaagaccat
gi|19570 : ttttttttatatcccttaccaaagaattatactgagatggaaaagcaagtgattgcgatttgtaaaagcttgcgtattcacacaatatcttgtgaattattattggcCTTGCGTTGCAA-AAGGAAATTTTAAACAAAACAAGACCAT
gi|19571 : ttttttttatattccttaccaatgatttatactgagatggaaaagcaagtgatttgggtttgtaaaagcttgcatattgacacactatcttgtgtgttattaatggcACCAAAGAGTTATACT--GAGATGGAAAAACAACTAATTTGGG----T--TTG---T-AAAAGCTTGC-GTATTCACACACTATCT
gi|19571 : ttttttttctatccctt-T-A-ATGT--CCTGACGTTGCAG-AAGAAAATTTGAAACAAAACAAGACCATtatgagttattaatgtcctgacgttgcagaagaaaatttgaaacaaaacaagaccat
gi|19572 : ttttttttctatcccttaccaaagagttatactgagatggaaaaacaactaatttgggtttgtaaaagcttgcgtattcacacactatcttatgagttatACCAACGAGTTATACT--GAGATGGAAAAGCAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-ATATTCACACACTATCTTGAAA-T-------TTTTTA-ATGGCC-TTA
gi|19572 : tcttgtttatttcccttCTTACATTGCAG-AAGGAAATTTTAACCAAAACAAGACCATcattgcagaaggaaattttaaccaaaacaagaccat
gi|19573 : tcttgtttatttcccttaccaacgagttatactgagatggaaaagcaagtgattggggttttgtaaaagcttgcatattcacacactatcttgaaattttttaatggcACCAAAGAATTATACT--GAGATGGAAAAGTAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-GTGTTCACACACTATCTTG
gi|19574 : ttctttttatattccttACCAAGGAATTATACA--GAGAAGGAAAGGCAACTGATT-GGGAT--T--TTG---C-AAAAGCCCGC-TTATTCACGCAAA-----------ATCTTG-TTTTCA-GTTATC-TTAAtgagttattaatggccttacgttacataacaaaacaagaccat
gi|19575 : tttattttgtattgtcatttcaATCAATGCATTATATA--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTTGC-GTATTCACACAAAATCTTGt
gi|19576 : ttttttttaaaaatccaacccaaCCAAGGAATTATATA--CAGAAGGAAAGGCAACTGACT-GAGAT--T--GTG---T-GAACGCTTGC-GTATTCACGCAAAATCT
gi|19577 : tttcttggttataaccagttCAAGAAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGTT--T--TAG---T-GAACGTTTGT-GTATTTACACACAATCTCG
gi|19578 : tttttttaatggatgactagCAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAACGTTTGT-GTATTTACACAAA-----------ATCTCG-TTTTTA-ATTATC-TTA
gi|19579 : tttttttaatggatgactagACCAAGGACTTATATA--GAAAAGGAAAAGCAACTGATT-GAGAT--T--TTA---T-GAACGTTCGC-GTATTCACGCAAAACCT
gi|19582 : ttttttctaagttacATCAAGACATTATATG--GAGAAGGAAATGCAACTGATT-TAAAT--T--TTG---T-GAACGCTAGC-GTATTCACACAAAATCTCGCAA-TA---------TCA-A-TGTCTTTAACTTCCAATCATCTCAGG----AAA---ACAAA-C-A-AAAagttttaaattttacacaatggaatactctacaaaatgagaccgt
gi|19585 : ttttgttaatcctACCAAGGAATTAAATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19588 : tttctatagcctaaACCCAGGAATTATATA--GAGAAGAAAAAGCAATTGATT-GAGGT--G--TTA-----GAATGATCGC-ATATCCACGCAAAATCTCG
gi|19594 : tttgtctgtctaCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCAC-ATATTCACGCAAG-----------ATCTTG-TTTTTA-ATTATC-TTACCTTTCAtga
gi|19595 : ttacattttagACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--AGG---T-GAATGCTGGC-ATATTCATGCAAGATCTCGCAA-CATCCTG-TTTTTA-ATTAAC-TTAACTTCCATTCATCT---------------CAAA-T-CTAAAT--TCTTACATTGCAG-AATGAAATTCTCATCAAAACA
gi|19596 : tcatatctATCAAGGACGTATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAATGCTTGC-GTTTTCATGTAATATCTC
gi|19597 : ttataattattAGGAATTACATA--GAGAAGGAATGGCAAATGATT-GAGAT-----------T-GAACGATCGC-ATATTCACTCAAAATCTCACAC-TATCTTG-TTCTAACATTAatga
gi|19597 : tacatgtcttatT--TCTAACATTACAG-AATGAAATTCTCATCAAAACAATACCATcagaatgaaattctcatcaaaacaataccat
gi|19598 : tacatgtcttataggaattacatagagaaggaatggcaaatgattgagattgaacgatcgcatattcactcaaaatctcacactatcttgCCAAGGAATTATATA--AAGAAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19600 : tatgttgctcaagACCAAGGACTTATATA--GAGAAGGGAAAGCATGTGATT-AAGAT--G--TTA---T-AGACGCTCGC-GTATTTACGCAAAATCTCGCGA-
gi|19601 : tatcgctttaaCAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTTGCAA-TATCTCG-TTTTTA-ATTATC-TTA
gi|19603 : tatctttgtCAAGGAATTATATA--GTGAAGGAAATACAACTGATT-GAGAG--T--TTG---T-GAACGTTTGT-GTATTCATGCAAAATCTCGCAA-TAT
gi|19605 : cccttaaCAAGGAATTATATA--GAGACGGAAACGCAAATGTTT-GAGAG--T--TTT---TAGAACACTCAT-GTATTCACGCACAATCTCGt
gi|19606 : ccttaAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCG
gi|19607 : cttactCAAGGACTTATATA--AAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACACTCGC-GTATTCACGCAAAATCTGGCGA-
gi|19608 : cttaagtATCAAGGATTTATATA--AAGAAGGAAAAGCAACTCAAT-GAG-------TTGACAT-GAACGCTTGC-GTATTCACGC-ATATCTCGCGA-att
gi|19610 : cttCAAGGAATTATATA--GAGATGGATAGGCAACTGATT-GAGCT--T--TTG---T-GAATGCTTGT-GTATTCACGCATAATCT
gi|19611 : ttaaCAAGGATTTATATA--GAGACGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GTATTCACGCAAAATCTTG
gi|19612 : ttagACCATGGAATTATATA--GAGAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAACGCTTCT-GTATTCACTAAAAATCTGGCAT-TATCTTG-TTTTCA-ACTCTC-TTAACTTCCATTCACCTCAGG----AAC---ACAAA-TCA-AAAC--TCTTACATTGCAG-AATGAAATTATCATCAAAACAATACCAT
gi|19613 : ttACCAAGGACTTATATA--GTGAAGGAAAAGCAACTGACT-GAGAT--G--TTA---T-GAATGCTTGT-GTATTCACGCAAAATCTTG
gi|19614 : ttCAAAGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGGT--T--TTG---T-GAACACTCCC-GTATTCAt
gi|19615 : ttaAAGGAATTATATA--GAGAAAGAAATGCAACTGATT-GACAG--T--TTG---T-GAAAACTCGC-GTATTCACGCAAAATCTCG
gi|19616 : ttattACCAAGGGATTATATA--GAGAAGGAAAAACAACTGATG-GAAAA--T--TTG---T-GAACGCTTGC-GTATTCGCGCAAAATCTCG
gi|19617 : ttACCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--GAG---T-GAACGCTCGC-GTATTCACGGAAAATCTCGCAA-TATCTCG-TTTTTA-TTTATC-TTAACGTCCATTTATCTCAGG----AAT---ACAAA-TCA-AACT--TCTTACACTGCAG-AATGAAATTGTCACCAAAACAATACCAT
gi|19622 : ttCCAAGGAATTATATA--GAGATGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GACCGCTTAC-GTATTCGCACAAAATCTCGCAA-TATCTTG-TTTTCA-GTTATC-TTAACTTCCATTCAT-----------AT---ACATA-TCA-AAAT--TCTTACATTGCAG-AATGAAATTGTAATCAAAACAATACCA
gi|19623 : tgACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGATTGT-GTATTCACGCA----------A-TATCTCG-TTTTCA-ATTATC-TTAAATCCCATTCATCTAAGG----AAC---ACAAA-TCA-AAAT--TCTTACATTGCTG-AATGAAATTCTCATCAAAATAATACCAT
gi|19624 : tATCAAGGAATTATATA--GAGAAGGAAAGGCAATTAATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTGCAA-TATCTCG-TTTTCA-ATTGTC-TTA
gi|19625 : tCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCTT-GTATTTACACAAAATCTCG
gi|19627 : tagCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTG
gi|19628 : taaCAAGGAATTACAAA--GAGAGGAAAAGGCAACTGATT-GGGAT--T--TTG---T-GAACGCTTGC-GTATTCGCACATAATTTCGCAA-TATCTCG-TTTTCA-ATTATC-TTTACTAACATTCATCTCAGG----AAC---ACAAA-T---CAATGATCTTACATTGCAG-AATGAAATTCTAGTCAAAACAA
gi|19629 : tagACCAAGGAATTATATG--GAGAAGGAAAGGCATATGATT-GATA---T--TGG---T-GAACGCTTGC-GTATTCACGCA
gi|19630 : tATCATGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GGGAT--T--TTG---T-GAACGCTCAC-GTATTCACGCTAAATATC
gi|19631 : tATCATGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAG--T--TAG---T-GAATGCTCGC-GTATTCACGCAAAATCTTG
gi|19632 : tACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATT
gi|19633 : tACCAAAGAATTATATA--GAGAAGGAAGGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCTCTCAAAATCTCGCAG-TATCTCG-TTTTCA-ATTATC-TTAACTTCCATTCATCTCAGG----AACGTGACAAATT-A-AAAT--TCTTACATTGCAT-AATGAAATTCTCATCAAAACAATACCATtgca
gi|19634 : tCAAGGAATTATATA--GAAAAGGAAAGGCAACTGATT-GGGAT--T--TTG---T-GAATGTTCAT-GTATTTACACAAAATCTCG
gi|19635 : tagATCAAAGAATGATATA--GAGAAGGAATGGCAACTAATT-GAGAT--T--TTG---T-GAATGCTCGC-GTTTTCACGCAAAATCTTG
gi|19636 : tATCAAGGACTTATATATAGAGAAGGAAAAGAAAATGATT-GAGATGTTAGTTA---T-GAACGCTTGC-GTATTCACGCAAAATCTCACGA-
gi|19644 : tATCAAGGAACTATATA--GAGAAGGAAAAGCAAATGATT-GAGGT--T--TTG---C-GAACGCTCGC-GTATTCACGTAAAATCTTGCAA-T
gi|19645 : ACAAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACGCTTGC-ATATTCACGCAAAATCTTGtact
gi|19646 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTCGT-GTATTCACGCAAAATCTCGCAA-TGTCTCG-TTTTTA-ATTATC-TTCACTTCCATTCATCTCAGG---------------------AAT--TCTTACACTGCAGAAATGAAATTGTCATCGAAACAATACCAT
gi|19647 : ACCAAGGACGTATACA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTG---T-TAACGCTCGC-ATATTCATGCAATATCTCGCGA-
gi|19648 : ACCAAAGAATTATATA--GAGAAGGAAAAGTAACTGATT-GAAAT--T--TTG---T-GAGCGCTCGC-GTATTTACGCAAAATCTCG
gi|19649 : ATCAAGGAATTATATT--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATt
gi|19650 : ACCAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTGGC-GTATTCATGCAAATTCTTGCAA-TATCTTG-TTTTTA-GTTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAA-TCA-AAAC--TCTTACACTGCAG-AATGAAATTGTCATCAAAACAATACCATt
gi|19651 : ACCAAGGAATTATATA--GGAAAGGAAAGGCAAATGGTT-GAGAT--T--TTG---T-GAACACTTGC-GTATTAACGCAAAATCTTGT-----------TTTTTA-ATTATC-TT
gi|19652 : ATCAAGGATTTCTATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAATATCTCGCAA-TATCTTG-TTTTCA-ATTGTC-TTA
gi|19653 : ATCAAGGAATTATATA--GAGGAGGAAAGGCAACTGTTT-GAGAT--T--GTG---T-AAACGCTCGC-ATATTCACGCAAAATCTTG
gi|19654 : ATCAAGGAATTATATA--GTGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTCACGCAAAATCTCG
gi|19655 : ACCAATGAATTATAAA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-TTATTCACGCAAAATCTCACAA-TATCTCG-TTTTTA-ATTATC-TTAAATTCCA
gi|19656 : ATCAAGGAATTATATA--GAGAAAGAAATGCAACTGACT-GAGAG--T--TTC---T-AAACGCTCGC-ATATTCACGCAAA-----------ATCTCA-TTTTCA-ATCATC-TTAACTTCCATTCACCTCATGATCCAAC---ACAAATT-A-AGAT--TGTTACATTGCAG-AAGGAAATTCTCATCAAAACAATACCAT
gi|19657 : ACCAAGGAAATATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GAATTCACGCAAAGTCTTG
gi|19658 : ACCAAGGATTTATATT--GAATTGGAAAAGTAATTCATT-GAGAT--T--TTG---T-GAAAACTTGC-ATATTCGCGCAAAATCT
gi|19659 : ATCAAGGAATTATAAA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCT
gi|19660 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GATAG--T--TTG---T-GAACATTGGC-ATATTCACGCAAAATCTCG
gi|19661 : ATCAAGGAATTATATA--GAGAAGAAAAAGTGACAGATT-GAGTT--T--TTG---T-GAATGCTTGC-GTATTCACTTAAAGTCTCACAA-TATCTTG-T
gi|19662 : ATCAATGACTTATATA--GAGTAGAAAAAGCAACTTATT-GAGAT--T--T-A---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCGA-
gi|19663 : ACCAAGGACTTATATA--GAGAAGAAAAAGAAACTGATT-GAGAT--G--TTA---T-CAATGTTTGC-GTATTCACCCAAAATCTCGCGA-attttt
gi|19664 : ATCAAGAAATTATAAA--GAGAAGGATAGGCAACTGGTT-GATAG--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19665 : ACCAAGGAATTATATA--GAAAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACACTCGC-ATATTCAC
gi|19676 : CCAAGGAATTGTATA--GAGGAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACTCA
gi|19677 : CTAAGGAATTATATA--GAGAAGGAAAGGCAATTGATT-GAGAT--A--TTG---T-GAACGTTCGC-ATATTCACACAAAATCTTGTAA-TATCTTG-TTTTCA-ATTATC-TTA
gi|19678 : CCAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-GAGAT--T--TTG---T-GAATGCTCGC-GTATTCACACAAAATCTCGCGA-
gi|19679 : CCAAGGAATTATATA--GAGAAAGAAAGGCAACTGATC-GAGAT--T--TGG---T-GAACGCTCGT-GTATTCACGAAATAGCTTGCAA-TATCTCG-TTTTCA-ATTGTC-TTA
gi|19686 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19687 : CAAGGAATTATATA--GAGAAGGAAAGGCAATGGAGT-GAGGT--T--TTG---T-AAACGCTTGC-ATATTCACGCAAAATCTTG
gi|19688 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GACAG--T--TTG---T-GAACACTCGC-ATATTCACGCAAAATCT
gi|19689 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTCGC-ATTTTCACGCAAAATTTTG------------TTTTCA-ATTATC-TTCACTTTCATTCATCCCAGGCAGGAAC---ATTAA-TCA-AAAT--TCTTACATTGCAA-AAGGAAATTGTCATCAAAACAATACCAT
gi|19690 : CAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19691 : CAAAGAATTATATA--GAAAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACACt
gi|19692 : CAAGGAATTATACA--GAGAAGGAAAGGTAGCTGATT-GAGAT--T--TTG---T-AAACGCTTGC-ATATTCACACAAAATCTCACAC-TATCTCG-TTTACA-ATCAT------CTTCCATTAGTCTCGGG----AAC---AAAAA-TCA-AAAT--TCTTACTTTGCAG-AATAAAATTACCATCAAAACAACACCAT
gi|19693 : AATGACTTGTATA--GAGACTGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACGCTTGT-GTATTCACACAAAATCT
gi|19694 : caCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTT---T-GAAAGCTTAT-GTATTTACACAAAATCTCGtatga
gi|19695 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTGACGCAAAATCTCG
gi|19696 : CAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-CGGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCG-TTTTCA-ATTATT-TTAACTTCCATTTATCCCAGG----AAT---ATAAA-TCA-AAAT--TCTTACATTGCAG-AATGAAATTTTCATCAAAACAATACCAT
gi|19697 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-AAACGCTCTT-GTATTTACACAAAATCTCACCA-TATCTCG-TTTTCA-ATGATC-TTA
gi|19698 : CAAGGAATTATAGA--GAGAAGGAAAGGCACTTGATT-GAGAG--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCTCGCAA-TATCTCGTTTTTTA-ATTATC-TTAACTTCCTTTCACCTCAGG----AAC---ACAAA-TCA-AAAT--TCTTACATTGCAG-AACAAAATTCTCATCAAAACAATACCAT
gi|19699 : CAAGGATTTATACA--GAGGAGAAAAGGCAACTGTTT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAATATCT
gi|19700 : CAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-AAGAT--T--TTG---T-GAATGCTCAC-ATATTCACGCA
gi|19701 : CAACGAATTATATA--AAGAAGGAAAGACAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTGACGC-ATATCTCGCAATTATCT
gi|19702 : CAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTCGtaat
gi|19703 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCCCAC-TTATTCACGCAAAATCTCG
gi|19704 : CAAGGATTTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCACGCAAAACCTCGCAA-AATCTCG-TTTTCA-ATAATC-TTA
gi|19705 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--ATG---T-GAACACTCGC-ATATTCATGCAAAATCTCG
gi|19718 : AAGGAATTATATA--GAGAAGGAAATACAACTGATT-GACAG--T--TTG---T-GAATGCTCTC-GTATTCA----------CGCAA-TATCTCG-TTTTCA-ATTATT-GTGACTTCCATTCACCTCAGG----AAC---ACAAA-TAA-AAAT--TCTTTCATTGCAG-AATGAAATTCTCATCAAAACAATACCGT
gi|19719 : AAGGAATTATATA--GAGAAGGAAATGCAATTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATCTCG-TTTTTA-ATTATC-TTA
gi|19724 : GAATTATATA--GAGAAGAAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-ATATTCACACAAAATCT-----------CG-TTTTCA-GTTATC-TTAATGTCCATTCATCTCA-G----AAC---ACAAA-TCA-AAAT--GCTTACATTGCAG-AATGAAATTCTAATTAAAACAATACCAT
gi|19725 : GAATTATAAA--GAAAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAAAGCTCGT-GTATTCACGCAAAATCTCG
gi|19726 : GAATTATATA--GAGAAGGAAAAGCAACTTATT-GAGAT--T--TTG---T-AAA-GCTTGCAATATTCATGCAAAATCTCACAA-AATATTT-TTTTCA-ATTATC-TGAACTTCCAACCATCTCAAG----AAT---ACAAATT-A-AAAT--TCTTACTTTGCAG-AATGAAATTCTCAACAAAACAAGACC
gi|19729 : AATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTAGC-GTATTCACACAAAATCTCACAA-TATCTCG-TTTTTA-ATTATC-TTCAC
Alignments
lowQualScore : 00 0 00 00 000 0 0 0 1 1 1 9999 333 1 1
lowQualScore : .. . .. .. ... . . . . . . .... ... . .
lowQualScore : 66 4 66 66 777 4 4 9 2 2 2 4444 999 8 6
consensus : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
Reference ( family-207 ) : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
gi|19569 : ACCAAAGAATTATACT--GAGATGGAAAAGCAAGTGATT-GCGA---T--TTG---T-AAAAGCTTGC-GTATTCACACAATATCTTG
gi|19569 : ttttttttatatcccttCTTACTTTGCAG-AATGAAATTTTAAACAAAACAAGACCATtgaattattattggccttactttgcagaatgaaattttaaacaaaacaagaccat
gi|19570 : ttttttttatatcccttaccaaagaattatactgagatggaaaagcaagtgattgcgatttgtaaaagcttgcgtattcacacaatatcttgtgaattattattggcCTTGCGTTGCAA-AAGGAAATTTTAAACAAAACAAGACCAT
gi|19571 : ttttttttatattccttaccaatgatttatactgagatggaaaagcaagtgatttgggtttgtaaaagcttgcatattgacacactatcttgtgtgttattaatggcACCAAAGAGTTATACT--GAGATGGAAAAACAACTAATTTGGG----T--TTG---T-AAAAGCTTGC-GTATTCACACACTATCT
gi|19571 : ttttttttctatcccttATTAATGTCCTGACGTTGCAG-AAGAAAATTTGAAACAAAACAAGACCATtatgagttattaatgtcctgacgttgcagaagaaaatttgaaacaaaacaagaccat
gi|19572 : ttttttttctatcccttaccaaagagttatactgagatggaaaaacaactaatttgggtttgtaaaagcttgcgtattcacacactatcttatgagttACCAACGAGTTATACT--GAGATGGAAAAGCAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-ATATTCACACACTATCTTGAAA-T------TTTTT-A-ATGGCC-TTA
gi|19572 : tcttgtttatttcccttCTTACATTGCAG-AAGGAAATTTTAACCAAAACAAGACCATcattgcagaaggaaattttaaccaaaacaagaccat
gi|19573 : tcttgtttatttcccttaccaacgagttatactgagatggaaaagcaagtgattggggttttgtaaaagcttgcatattcacacactatcttgaaattttttaatggcACCAAAGAATTATACT--GAGATGGAAAAGTAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-GTGTTCACACACTATCTTG
gi|19574 : ttctttttatattccttACCAAGGAATTATACA--GAGAAGGAAAGGCAACTGATT-GGGAT--T--TTG---C-AAAAGCCCGC-TTATTCACGCAAA-----------ATCTTGTTTTC-A-GTTATC-TTAAtgagttattaatggccttacgttacataacaaaacaagaccat
gi|19575 : tttattttgtattgtcatttcaATCAATGCATTATATA--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTTGC-GTATTCACACAAAATCTTGt
gi|19576 : ttttttttaaaaatccaacccaaCCAAGGAATTATATA--CAGAAGGAAAGGCAACTGACT-GAGAT--T--GTG---T-GAACGCTTGC-GTATTCACGCAAAATCT
gi|19577 : tttcttggttataaccagttCAAGAAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGTT--T--TAG---T-GAACGTTTGT-GTATTTACACACAATCTCG
gi|19578 : tttttttaatggatgactagCAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAACGTTTGT-GTATTTACACAAA-----------ATCTCGTTTTT-A-ATTATC-TTA
gi|19579 : tttttttaatggatgactagACCAAGGACTTATATA--GAAAAGGAAAAGCAACTGATT-GAGAT--T--TTA---T-GAACGTTCGC-GTATTCACGCAAAACCT
gi|19582 : ttttttctaagttacATCAAGACATTATATG--GAGAAGGAAATGCAACTGATT-TAAAT--T--TTG---T-GAACGCTAGC-GTATTCACACAAAATCTCGCAA-TA--------TC-A-A-TGTCTTTAACTTCCAATCATCTCAGG----AAA---ACAAA-CAAAAagttttaaattttacacaatggaatactctacaaaatgagaccgt
gi|19585 : ttttgttaatcctACCAAGGAATTAAATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19588 : tttctatagcctaaACCCAGGAATTATATA--GAGAAGAAAAAGCAATTGATT-GAGGT--G--TTA-----GAATGATCGC-ATATCCACGCAAAATCTCG
gi|19594 : tttgtctgtctaCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCAC-ATATTCACGCAAG-----------ATCTTGTTTTT-A-ATTATC-TTACCTTTCAtga
gi|19595 : ttacattttagACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--AGG---T-GAATGCTGGC-ATATTCATGCAAGATCTCGCAA-CATCCTGTTTTT-A-ATTAAC-TTAACTTCCATTCATCT---------------CAAATCTAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACA
gi|19596 : tcatatctATCAAGGACGTATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAATGCTTGC-GTTTTCATGTAATATCTC
gi|19597 : ttataattattAGGAATTACATA--GAGAAGGAATGGCAAATGATT-GAGAT-----------T-GAACGATCGC-ATATTCACTCAAAATCTCACAC-TATCTTGTTCTA-ACATTAatga
gi|19597 : tacatgtcttatTTCTAACATTACAG-AATGAAATTCTCATCAAAACAATACCATcagaatgaaattctcatcaaaacaataccat
gi|19598 : tacatgtcttataggaattacatagagaaggaatggcaaatgattgagattgaacgatcgcatattcactcaaaatctcacactatcttgCCAAGGAATTATATA--AAGAAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19600 : tatgttgctcaagACCAAGGACTTATATA--GAGAAGGGAAAGCATGTGATT-AAGAT--G--TTA---T-AGACGCTCGC-GTATTTACGCAAAATCTCGCGA-
gi|19601 : tatcgctttaaCAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTTGCAA-TATCTCGTTTTT-A-ATTATC-TTA
gi|19603 : tatctttgtCAAGGAATTATATA--GTGAAGGAAATACAACTGATT-GAGAG--T--TTG---T-GAACGTTTGT-GTATTCATGCAAAATCTCGCAA-TAT
gi|19605 : cccttaaCAAGGAATTATATA--GAGACGGAAACGCAAATGTTT-GAGAG--T--TTT---TAGAACACTCAT-GTATTCACGCACAATCTCGt
gi|19606 : ccttaAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCG
gi|19607 : cttactCAAGGACTTATATA--AAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACACTCGC-GTATTCACGCAAAATCTGGCGA-
gi|19608 : cttaagtATCAAGGATTTATATA--AAGAAGGAAAAGCAACTCAAT-GAG-------TTGACAT-GAACGCTTGC-GTATTCACGC-ATATCTCGCGA-att
gi|19610 : cttCAAGGAATTATATA--GAGATGGATAGGCAACTGATT-GAGCT--T--TTG---T-GAATGCTTGT-GTATTCACGCATAATCT
gi|19611 : ttaaCAAGGATTTATATA--GAGACGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GTATTCACGCAAAATCTTG
gi|19612 : ttagACCATGGAATTATATA--GAGAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAACGCTTCT-GTATTCACTAAAAATCTGGCAT-TATCTTGTTTTC-A-ACTCTC-TTAACTTCCATTCACCTCAGG----AAC---ACAAATCAAAACTCTTACATTGCAG-AATGAAATTATCATCAAAACAATACCAT
gi|19613 : ttACCAAGGACTTATATA--GTGAAGGAAAAGCAACTGACT-GAGAT--G--TTA---T-GAATGCTTGT-GTATTCACGCAAAATCTTG
gi|19614 : ttCAAAGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGGT--T--TTG---T-GAACACTCCC-GTATTCAt
gi|19615 : ttaAAGGAATTATATA--GAGAAAGAAATGCAACTGATT-GACAG--T--TTG---T-GAAAACTCGC-GTATTCACGCAAAATCTCG
gi|19616 : ttattACCAAGGGATTATATA--GAGAAGGAAAAACAACTGATG-GAAAA--T--TTG---T-GAACGCTTGC-GTATTCGCGCAAAATCTCG
gi|19617 : ttACCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--GAG---T-GAACGCTCGC-GTATTCACGGAAAATCTCGCAA-TATCTCGTTTTT-A-TTTATC-TTAACGTCCATTTATCTCAGG----AAT---ACAAATCAAACTTCTTACACTGCAG-AATGAAATTGTCACCAAAACAATACCAT
gi|19622 : ttCCAAGGAATTATATA--GAGATGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GACCGCTTAC-GTATTCGCACAAAATCTCGCAA-TATCTTGTTTTC-A-GTTATC-TTAACTTCCATTCAT-----------AT---ACATATCAAAATTCTTACATTGCAG-AATGAAATTGTAATCAAAACAATACCA
gi|19623 : tgACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGATTGT-GTATTCACGCA----------A-TATCTCGTTTTC-A-ATTATC-TTAAATCCCATTCATCTAAGG----AAC---ACAAATCAAAATTCTTACATTGCTG-AATGAAATTCTCATCAAAATAATACCAT
gi|19624 : tATCAAGGAATTATATA--GAGAAGGAAAGGCAATTAATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTGCAA-TATCTCGTTTTC-A-ATTGTC-TTA
gi|19625 : tCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCTT-GTATTTACACAAAATCTCG
gi|19627 : tagCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTG
gi|19628 : taaCAAGGAATTACAAA--GAGAGGAAAAGGCAACTGATT-GGGAT--T--TTG---T-GAACGCTTGC-GTATTCGCACATAATTTCGCAA-TATCTCGTTTTC-A-ATTATC-TTTACTAACATTCATCTCAGG----AAC---ACAAATCAATGATCTTACATTGCAG-AATGAAATTCTAGTCAAAACAA
gi|19629 : tagACCAAGGAATTATATG--GAGAAGGAAAGGCATATGATT-GATA---T--TGG---T-GAACGCTTGC-GTATTCACGCA
gi|19630 : tATCATGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GGGAT--T--TTG---T-GAACGCTCAC-GTATTCACGCTAAATATC
gi|19631 : tATCATGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAG--T--TAG---T-GAATGCTCGC-GTATTCACGCAAAATCTTG
gi|19632 : tACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATT
gi|19633 : tACCAAAGAATTATATA--GAGAAGGAAGGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCTCTCAAAATCTCGCAG-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AACGTGACAAATTAAAATTCTTACATTGCAT-AATGAAATTCTCATCAAAACAATACCATtgca
gi|19634 : tCAAGGAATTATATA--GAAAAGGAAAGGCAACTGATT-GGGAT--T--TTG---T-GAATGTTCAT-GTATTTACACAAAATCTCG
gi|19635 : tagATCAAAGAATGATATA--GAGAAGGAATGGCAACTAATT-GAGAT--T--TTG---T-GAATGCTCGC-GTTTTCACGCAAAATCTTG
gi|19636 : tATCAAGGACTTATATATAGAGAAGGAAAAGAAAATGATT-GAGATGTTAGTTA---T-GAACGCTTGC-GTATTCACGCAAAATCTCACGA-
gi|19644 : tATCAAGGAACTATATA--GAGAAGGAAAAGCAAATGATT-GAGGT--T--TTG---C-GAACGCTCGC-GTATTCACGTAAAATCTTGCAA-T
gi|19645 : ACAAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACGCTTGC-ATATTCACGCAAAATCTTGtact
gi|19646 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTCGT-GTATTCACGCAAAATCTCGCAA-TGTCTCGTTTTT-A-ATTATC-TTCACTTCCATTCATCTCAGG-------------------AATTCTTACACTGCAGAAATGAAATTGTCATCGAAACAATACCAT
gi|19647 : ACCAAGGACGTATACA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTG---T-TAACGCTCGC-ATATTCATGCAATATCTCGCGA-
gi|19648 : ACCAAAGAATTATATA--GAGAAGGAAAAGTAACTGATT-GAAAT--T--TTG---T-GAGCGCTCGC-GTATTTACGCAAAATCTCG
gi|19649 : ATCAAGGAATTATATT--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATt
gi|19650 : ACCAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTGGC-GTATTCATGCAAATTCTTGCAA-TATCTTGTTTTT-A-GTTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAACTCTTACACTGCAG-AATGAAATTGTCATCAAAACAATACCATt
gi|19651 : ACCAAGGAATTATATA--GGAAAGGAAAGGCAAATGGTT-GAGAT--T--TTG---T-GAACACTTGC-GTATTAACGCAAAATCTTGT----------TTTTT-A-ATTATC-TT
gi|19652 : ATCAAGGATTTCTATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAATATCTCGCAA-TATCTTGTTTTC-A-ATTGTC-TTA
gi|19653 : ATCAAGGAATTATATA--GAGGAGGAAAGGCAACTGTTT-GAGAT--T--GTG---T-AAACGCTCGC-ATATTCACGCAAAATCTTG
gi|19654 : ATCAAGGAATTATATA--GTGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTCACGCAAAATCTCG
gi|19655 : ACCAATGAATTATAAA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-TTATTCACGCAAAATCTCACAA-TATCTCGTTTTT-A-ATTATC-TTAAATTCCA
gi|19656 : ATCAAGGAATTATATA--GAGAAAGAAATGCAACTGACT-GAGAG--T--TTC---T-AAACGCTCGC-ATATTCACGCAAA-----------ATCTCATTTTC-A-ATCATC-TTAACTTCCATTCACCTCATGATCCAAC---ACAAATTAAGATTGTTACATTGCAG-AAGGAAATTCTCATCAAAACAATACCAT
gi|19657 : ACCAAGGAAATATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GAATTCACGCAAAGTCTTG
gi|19658 : ACCAAGGATTTATATT--GAATTGGAAAAGTAATTCATT-GAGAT--T--TTG---T-GAAAACTTGC-ATATTCGCGCAAAATCT
gi|19659 : ATCAAGGAATTATAAA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCT
gi|19660 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GATAG--T--TTG---T-GAACATTGGC-ATATTCACGCAAAATCTCG
gi|19661 : ATCAAGGAATTATATA--GAGAAGAAAAAGTGACAGATT-GAGTT--T--TTG---T-GAATGCTTGC-GTATTCACTTAAAGTCTCACAA-TATCTTGT
gi|19662 : ATCAATGACTTATATA--GAGTAGAAAAAGCAACTTATT-GAGAT--T--T-A---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCGA-
gi|19663 : ACCAAGGACTTATATA--GAGAAGAAAAAGAAACTGATT-GAGAT--G--TTA---T-CAATGTTTGC-GTATTCACCCAAAATCTCGCGA-attttt
gi|19664 : ATCAAGAAATTATAAA--GAGAAGGATAGGCAACTGGTT-GATAG--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19665 : ACCAAGGAATTATATA--GAAAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACACTCGC-ATATTCAC
gi|19676 : CCAAGGAATTGTATA--GAGGAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACTCA
gi|19677 : CTAAGGAATTATATA--GAGAAGGAAAGGCAATTGATT-GAGAT--A--TTG---T-GAACGTTCGC-ATATTCACACAAAATCTTGTAA-TATCTTGTTTTC-A-ATTATC-TTA
gi|19678 : CCAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-GAGAT--T--TTG---T-GAATGCTCGC-GTATTCACACAAAATCTCGCGA-
gi|19679 : CCAAGGAATTATATA--GAGAAAGAAAGGCAACTGATC-GAGAT--T--TGG---T-GAACGCTCGT-GTATTCACGAAATAGCTTGCAA-TATCTCGTTTTC-A-ATTGTC-TTA
gi|19686 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19687 : CAAGGAATTATATA--GAGAAGGAAAGGCAATGGAGT-GAGGT--T--TTG---T-AAACGCTTGC-ATATTCACGCAAAATCTTG
gi|19688 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GACAG--T--TTG---T-GAACACTCGC-ATATTCACGCAAAATCT
gi|19689 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTCGC-ATTTTCACGCAAAATTTTG-----------TTTTC-A-ATTATC-TTCACTTTCATTCATCCCAGGCAGGAAC---ATTAATCAAAATTCTTACATTGCAA-AAGGAAATTGTCATCAAAACAATACCAT
gi|19690 : CAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19691 : CAAAGAATTATATA--GAAAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACACt
gi|19692 : CAAGGAATTATACA--GAGAAGGAAAGGTAGCTGATT-GAGAT--T--TTG---T-AAACGCTTGC-ATATTCACACAAAATCTCACAC-TATCTCGTTTAC-A-ATCAT------CTTCCATTAGTCTCGGG----AAC---AAAAATCAAAATTCTTACTTTGCAG-AATAAAATTACCATCAAAACAACACCAT
gi|19693 : AATGACTTGTATA--GAGACTGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACGCTTGT-GTATTCACACAAAATCT
gi|19694 : caCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTT---T-GAAAGCTTAT-GTATTTACACAAAATCTCGtatga
gi|19695 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTGACGCAAAATCTCG
gi|19696 : CAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-CGGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATT-TTAACTTCCATTTATCCCAGG----AAT---ATAAATCAAAATTCTTACATTGCAG-AATGAAATTTTCATCAAAACAATACCAT
gi|19697 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-AAACGCTCTT-GTATTTACACAAAATCTCACCA-TATCTCGTTTTC-A-ATGATC-TTA
gi|19698 : CAAGGAATTATAGA--GAGAAGGAAAGGCACTTGATT-GAGAG--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCTCGCAA-TATCTCGTTTTTTA-ATTATC-TTAACTTCCTTTCACCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AACAAAATTCTCATCAAAACAATACCAT
gi|19699 : CAAGGATTTATACA--GAGGAGAAAAGGCAACTGTTT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAATATCT
gi|19700 : CAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-AAGAT--T--TTG---T-GAATGCTCAC-ATATTCACGCA
gi|19701 : CAACGAATTATATA--AAGAAGGAAAGACAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTGACGC-ATATCTCGCAATTATCT
gi|19702 : CAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTCGtaat
gi|19703 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCCCAC-TTATTCACGCAAAATCTCG
gi|19704 : CAAGGATTTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCACGCAAAACCTCGCAA-AATCTCGTTTTC-A-ATAATC-TTA
gi|19705 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--ATG---T-GAACACTCGC-ATATTCATGCAAAATCTCG
gi|19718 : AAGGAATTATATA--GAGAAGGAAATACAACTGATT-GACAG--T--TTG---T-GAATGCTCTC-GTATTCACGCA----------A-TATCTCGTTTTC-A-ATTATT-GTGACTTCCATTCACCTCAGG----AAC---ACAAATAAAAATTCTTTCATTGCAG-AATGAAATTCTCATCAAAACAATACCGT
gi|19719 : AAGGAATTATATA--GAGAAGGAAATGCAATTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATCTCGTTTTT-A-ATTATC-TTA
gi|19724 : GAATTATATA--GAGAAGAAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-ATATTCACACAAA-----------ATCTCGTTTTC-A-GTTATC-TTAATGTCCATTCATCTCA-G----AAC---ACAAATCAAAATGCTTACATTGCAG-AATGAAATTCTAATTAAAACAATACCAT
gi|19725 : GAATTATAAA--GAAAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAAAGCTCGT-GTATTCACGCAAAATCTCG
gi|19726 : GAATTATATA--GAGAAGGAAAAGCAACTTATT-GAGAT--T--TTG---T-AAA-GCTTGCAATATTCATGCAAAATCTCACAA-AATATTTTTTTC-A-ATTATC-TGAACTTCCAACCATCTCAAG----AAT---ACAAATTAAAATTCTTACTTTGCAG-AATGAAATTCTCAACAAAACAAGACC
gi|19729 : AATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTAGC-GTATTCACACAAAATCTCACAA-TATCTCGTTTTT-A-ATTATC-TTCAC
Alignments
lowQualScore : 00 0 00 00 000 0 0 0 1 1 1 9999 333 1 1
lowQualScore : .. . .. .. ... . . . . . . .... ... . .
lowQualScore : 66 4 66 66 777 4 4 9 2 2 2 4444 999 8 6
consensus : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
Reference ( family-207 ) : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
gi|19569 : ACCAAAGAATTATACT--GAGATGGAAAAGCAAGTGATT-GCGA---T--TTG---T-AAAAGCTTGC-GTATTCACACAATATCTTG
gi|19569 : ttttttttatatcccttCTTACTTTGCAG-AATGAAATTTTAAACAAAACAAGACCATtgaattattattggccttactttgcagaatgaaattttaaacaaaacaagaccat
gi|19570 : ttttttttatatcccttaccaaagaattatactgagatggaaaagcaagtgattgcgatttgtaaaagcttgcgtattcacacaatatcttgtgaattattattggcCTTGCGTTGCAA-AAGGAAATTTTAAACAAAACAAGACCAT
gi|19571 : ttttttttatattccttaccaatgatttatactgagatggaaaagcaagtgatttgggtttgtaaaagcttgcatattgacacactatcttgtgtgttattaatggcACCAAAGAGTTATACT--GAGATGGAAAAACAACTAATTTGGG----T--TTG---T-AAAAGCTTGC-GTATTCACACACTATCT
gi|19571 : ttttttttctatcccttATTAATGTCCTGACGTTGCAG-AAGAAAATTTGAAACAAAACAAGACCATtatgagttattaatgtcctgacgttgcagaagaaaatttgaaacaaaacaagaccat
gi|19572 : ttttttttctatcccttaccaaagagttatactgagatggaaaaacaactaatttgggtttgtaaaagcttgcgtattcacacactatcttatgagttACCAACGAGTTATACT--GAGATGGAAAAGCAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-ATATTCACACACTATCTTGAAA-T------TTTTT-A-ATGGCC-TTA
gi|19572 : tcttgtttatttcccttCTTACATTGCAG-AAGGAAATTTTAACCAAAACAAGACCATcattgcagaaggaaattttaaccaaaacaagaccat
gi|19573 : tcttgtttatttcccttaccaacgagttatactgagatggaaaagcaagtgattggggttttgtaaaagcttgcatattcacacactatcttgaaattttttaatggcACCAAAGAATTATACT--GAGATGGAAAAGTAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-GTGTTCACACACTATCTTG
gi|19574 : ttctttttatattccttACCAAGGAATTATACA--GAGAAGGAAAGGCAACTGATT-GGGAT--T--TTG---C-AAAAGCCCGC-TTATTCACGCAAA-----------ATCTTGTTTTC-A-GTTATC-TTAAtgagttattaatggccttacgttacataacaaaacaagaccat
gi|19575 : tttattttgtattgtcatttcaATCAATGCATTATATA--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTTGC-GTATTCACACAAAATCTTGt
gi|19576 : ttttttttaaaaatccaacccaaCCAAGGAATTATATA--CAGAAGGAAAGGCAACTGACT-GAGAT--T--GTG---T-GAACGCTTGC-GTATTCACGCAAAATCT
gi|19577 : tttcttggttataaccagttCAAGAAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGTT--T--TAG---T-GAACGTTTGT-GTATTTACACACAATCTCG
gi|19578 : tttttttaatggatgactagCAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAACGTTTGT-GTATTTACACAAA-----------ATCTCGTTTTT-A-ATTATC-TTA
gi|19579 : tttttttaatggatgactagACCAAGGACTTATATA--GAAAAGGAAAAGCAACTGATT-GAGAT--T--TTA---T-GAACGTTCGC-GTATTCACGCAAAACCT
gi|19582 : ttttttctaagttacATCAAGACATTATATG--GAGAAGGAAATGCAACTGATT-TAAAT--T--TTG---T-GAACGCTAGC-GTATTCACACAAAATCTCGCAA-TA--------TC-A-A-TGTCTTTAACTTCCAATCATCTCAGG----AAA---ACAAA-CAAAAagttttaaattttacacaatggaatactctacaaaatgagaccgt
gi|19585 : ttttgttaatcctACCAAGGAATTAAATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19588 : tttctatagcctaaACCCAGGAATTATATA--GAGAAGAAAAAGCAATTGATT-GAGGT--G--TTA-----GAATGATCGC-ATATCCACGCAAAATCTCG
gi|19594 : tttgtctgtctaCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCAC-ATATTCACGCAAG-----------ATCTTGTTTTT-A-ATTATC-TTACCTTTCAtga
gi|19595 : ttacattttagACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--AGG---T-GAATGCTGGC-ATATTCATGCAAGATCTCGCAA-CATCCTGTTTTT-A-ATTAAC-TTAACTTCCATTCATCT---------------CAAATCTAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACA
gi|19596 : tcatatctATCAAGGACGTATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAATGCTTGC-GTTTTCATGTAATATCTC
gi|19597 : ttataattattAGGAATTACATA--GAGAAGGAATGGCAAATGATT-GAGAT-----------T-GAACGATCGC-ATATTCACTCAAAATCTCACAC-TATCTTGTTCTA-ACATTAatga
gi|19597 : tacatgtcttatTTCTAACATTACAG-AATGAAATTCTCATCAAAACAATACCATcagaatgaaattctcatcaaaacaataccat
gi|19598 : tacatgtcttataggaattacatagagaaggaatggcaaatgattgagattgaacgatcgcatattcactcaaaatctcacactatcttgCCAAGGAATTATATA--AAGAAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19600 : tatgttgctcaagACCAAGGACTTATATA--GAGAAGGGAAAGCATGTGATT-AAGAT--G--TTA---T-AGACGCTCGC-GTATTTACGCAAAATCTCGCGA-
gi|19601 : tatcgctttaaCAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTTGCAA-TATCTCGTTTTT-A-ATTATC-TTA
gi|19603 : tatctttgtCAAGGAATTATATA--GTGAAGGAAATACAACTGATT-GAGAG--T--TTG---T-GAACGTTTGT-GTATTCATGCAAAATCTCGCAA-TAT
gi|19605 : cccttaaCAAGGAATTATATA--GAGACGGAAACGCAAATGTTT-GAGAG--T--TTT---TAGAACACTCAT-GTATTCACGCACAATCTCGt
gi|19606 : ccttaAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCG
gi|19607 : cttactCAAGGACTTATATA--AAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACACTCGC-GTATTCACGCAAAATCTGGCGA-
gi|19608 : cttaagtATCAAGGATTTATATA--AAGAAGGAAAAGCAACTCAAT-GAG-------TTGACAT-GAACGCTTGC-GTATTCACGC-ATATCTCGCGA-att
gi|19610 : cttCAAGGAATTATATA--GAGATGGATAGGCAACTGATT-GAGCT--T--TTG---T-GAATGCTTGT-GTATTCACGCATAATCT
gi|19611 : ttaaCAAGGATTTATATA--GAGACGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GTATTCACGCAAAATCTTG
gi|19612 : ttagACCATGGAATTATATA--GAGAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAACGCTTCT-GTATTCACTAAAAATCTGGCAT-TATCTTGTTTTC-A-ACTCTC-TTAACTTCCATTCACCTCAGG----AAC---ACAAATCAAAACTCTTACATTGCAG-AATGAAATTATCATCAAAACAATACCAT
gi|19613 : ttACCAAGGACTTATATA--GTGAAGGAAAAGCAACTGACT-GAGAT--G--TTA---T-GAATGCTTGT-GTATTCACGCAAAATCTTG
gi|19614 : ttCAAAGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGGT--T--TTG---T-GAACACTCCC-GTATTCAt
gi|19615 : ttaAAGGAATTATATA--GAGAAAGAAATGCAACTGATT-GACAG--T--TTG---T-GAAAACTCGC-GTATTCACGCAAAATCTCG
gi|19616 : ttattACCAAGGGATTATATA--GAGAAGGAAAAACAACTGATG-GAAAA--T--TTG---T-GAACGCTTGC-GTATTCGCGCAAAATCTCG
gi|19617 : ttACCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--GAG---T-GAACGCTCGC-GTATTCACGGAAAATCTCGCAA-TATCTCGTTTTT-A-TTTATC-TTAACGTCCATTTATCTCAGG----AAT---ACAAATCAAACTTCTTACACTGCAG-AATGAAATTGTCACCAAAACAATACCAT
gi|19622 : ttCCAAGGAATTATATA--GAGATGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GACCGCTTAC-GTATTCGCACAAAATCTCGCAA-TATCTTGTTTTC-A-GTTATC-TTAACTTCCATTCAT-----------AT---ACATATCAAAATTCTTACATTGCAG-AATGAAATTGTAATCAAAACAATACCA
gi|19623 : tgACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGATTGT-GTATTCACGCA----------A-TATCTCGTTTTC-A-ATTATC-TTAAATCCCATTCATCTAAGG----AAC---ACAAATCAAAATTCTTACATTGCTG-AATGAAATTCTCATCAAAATAATACCAT
gi|19624 : tATCAAGGAATTATATA--GAGAAGGAAAGGCAATTAATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTGCAA-TATCTCGTTTTC-A-ATTGTC-TTA
gi|19625 : tCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCTT-GTATTTACACAAAATCTCG
gi|19627 : tagCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTG
gi|19628 : taaCAAGGAATTACAAA--GAGAGGAAAAGGCAACTGATT-GGGAT--T--TTG---T-GAACGCTTGC-GTATTCGCACATAATTTCGCAA-TATCTCGTTTTC-A-ATTATC-TTTACTAACATTCATCTCAGG----AAC---ACAAATCAATGATCTTACATTGCAG-AATGAAATTCTAGTCAAAACAA
gi|19629 : tagACCAAGGAATTATATG--GAGAAGGAAAGGCATATGATT-GATA---T--TGG---T-GAACGCTTGC-GTATTCACGCA
gi|19630 : tATCATGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GGGAT--T--TTG---T-GAACGCTCAC-GTATTCACGCTAAATATC
gi|19631 : tATCATGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAG--T--TAG---T-GAATGCTCGC-GTATTCACGCAAAATCTTG
gi|19632 : tACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATT
gi|19633 : tACCAAAGAATTATATA--GAGAAGGAAGGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCTCTCAAAATCTCGCAG-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AACGTGACAAATTAAAATTCTTACATTGCAT-AATGAAATTCTCATCAAAACAATACCATtgca
gi|19634 : tCAAGGAATTATATA--GAAAAGGAAAGGCAACTGATT-GGGAT--T--TTG---T-GAATGTTCAT-GTATTTACACAAAATCTCG
gi|19635 : tagATCAAAGAATGATATA--GAGAAGGAATGGCAACTAATT-GAGAT--T--TTG---T-GAATGCTCGC-GTTTTCACGCAAAATCTTG
gi|19636 : tATCAAGGACTTATATATAGAGAAGGAAAAGAAAATGATT-GAGATGTTAGTTA---T-GAACGCTTGC-GTATTCACGCAAAATCTCACGA-
gi|19644 : tATCAAGGAACTATATA--GAGAAGGAAAAGCAAATGATT-GAGGT--T--TTG---C-GAACGCTCGC-GTATTCACGTAAAATCTTGCAA-T
gi|19645 : ACAAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACGCTTGC-ATATTCACGCAAAATCTTGtact
gi|19646 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTCGT-GTATTCACGCAAAATCTCGCAA-TGTCTCGTTTTT-A-ATTATC-TTCACTTCCATTCATCTCAGG-------------------AATTCTTACACTGCAGAAATGAAATTGTCATCGAAACAATACCAT
gi|19647 : ACCAAGGACGTATACA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTG---T-TAACGCTCGC-ATATTCATGCAATATCTCGCGA-
gi|19648 : ACCAAAGAATTATATA--GAGAAGGAAAAGTAACTGATT-GAAAT--T--TTG---T-GAGCGCTCGC-GTATTTACGCAAAATCTCG
gi|19649 : ATCAAGGAATTATATT--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATt
gi|19650 : ACCAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTGGC-GTATTCATGCAAATTCTTGCAA-TATCTTGTTTTT-A-GTTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAACTCTTACACTGCAG-AATGAAATTGTCATCAAAACAATACCATt
gi|19651 : ACCAAGGAATTATATA--GGAAAGGAAAGGCAAATGGTT-GAGAT--T--TTG---T-GAACACTTGC-GTATTAACGCAAAATCTTGT----------TTTTT-A-ATTATC-TT
gi|19652 : ATCAAGGATTTCTATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAATATCTCGCAA-TATCTTGTTTTC-A-ATTGTC-TTA
gi|19653 : ATCAAGGAATTATATA--GAGGAGGAAAGGCAACTGTTT-GAGAT--T--GTG---T-AAACGCTCGC-ATATTCACGCAAAATCTTG
gi|19654 : ATCAAGGAATTATATA--GTGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTCACGCAAAATCTCG
gi|19655 : ACCAATGAATTATAAA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-TTATTCACGCAAAATCTCACAA-TATCTCGTTTTT-A-ATTATC-TTAAATTCCA
gi|19656 : ATCAAGGAATTATATA--GAGAAAGAAATGCAACTGACT-GAGAG--T--TTC---T-AAACGCTCGC-ATATTCACGCAAA-----------ATCTCATTTTC-A-ATCATC-TTAACTTCCATTCACCTCATGATCCAAC---ACAAATTAAGATTGTTACATTGCAG-AAGGAAATTCTCATCAAAACAATACCAT
gi|19657 : ACCAAGGAAATATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GAATTCACGCAAAGTCTTG
gi|19658 : ACCAAGGATTTATATT--GAATTGGAAAAGTAATTCATT-GAGAT--T--TTG---T-GAAAACTTGC-ATATTCGCGCAAAATCT
gi|19659 : ATCAAGGAATTATAAA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCT
gi|19660 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GATAG--T--TTG---T-GAACATTGGC-ATATTCACGCAAAATCTCG
gi|19661 : ATCAAGGAATTATATA--GAGAAGAAAAAGTGACAGATT-GAGTT--T--TTG---T-GAATGCTTGC-GTATTCACTTAAAGTCTCACAA-TATCTTGT
gi|19662 : ATCAATGACTTATATA--GAGTAGAAAAAGCAACTTATT-GAGAT--T--T-A---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCGA-
gi|19663 : ACCAAGGACTTATATA--GAGAAGAAAAAGAAACTGATT-GAGAT--G--TTA---T-CAATGTTTGC-GTATTCACCCAAAATCTCGCGA-attttt
gi|19664 : ATCAAGAAATTATAAA--GAGAAGGATAGGCAACTGGTT-GATAG--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19665 : ACCAAGGAATTATATA--GAAAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACACTCGC-ATATTCAC
gi|19676 : CCAAGGAATTGTATA--GAGGAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACTCA
gi|19677 : CTAAGGAATTATATA--GAGAAGGAAAGGCAATTGATT-GAGAT--A--TTG---T-GAACGTTCGC-ATATTCACACAAAATCTTGTAA-TATCTTGTTTTC-A-ATTATC-TTA
gi|19678 : CCAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-GAGAT--T--TTG---T-GAATGCTCGC-GTATTCACACAAAATCTCGCGA-
gi|19679 : CCAAGGAATTATATA--GAGAAAGAAAGGCAACTGATC-GAGAT--T--TGG---T-GAACGCTCGT-GTATTCACGAAATAGCTTGCAA-TATCTCGTTTTC-A-ATTGTC-TTA
gi|19686 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19687 : CAAGGAATTATATA--GAGAAGGAAAGGCAATGGAGT-GAGGT--T--TTG---T-AAACGCTTGC-ATATTCACGCAAAATCTTG
gi|19688 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GACAG--T--TTG---T-GAACACTCGC-ATATTCACGCAAAATCT
gi|19689 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTCGC-ATTTTCACGCAAAATTTTG-----------TTTTC-A-ATTATC-TTCACTTTCATTCATCCCAGGCAGGAAC---ATTAATCAAAATTCTTACATTGCAA-AAGGAAATTGTCATCAAAACAATACCAT
gi|19690 : CAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19691 : CAAAGAATTATATA--GAAAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACACt
gi|19692 : CAAGGAATTATACA--GAGAAGGAAAGGTAGCTGATT-GAGAT--T--TTG---T-AAACGCTTGC-ATATTCACACAAAATCTCACAC-TATCTCGTTTAC-A-ATCAT------CTTCCATTAGTCTCGGG----AAC---AAAAATCAAAATTCTTACTTTGCAG-AATAAAATTACCATCAAAACAACACCAT
gi|19693 : AATGACTTGTATA--GAGACTGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACGCTTGT-GTATTCACACAAAATCT
gi|19694 : caCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTT---T-GAAAGCTTAT-GTATTTACACAAAATCTCGtatga
gi|19695 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTGACGCAAAATCTCG
gi|19696 : CAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-CGGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATT-TTAACTTCCATTTATCCCAGG----AAT---ATAAATCAAAATTCTTACATTGCAG-AATGAAATTTTCATCAAAACAATACCAT
gi|19697 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-AAACGCTCTT-GTATTTACACAAAATCTCACCA-TATCTCGTTTTC-A-ATGATC-TTA
gi|19698 : CAAGGAATTATAGA--GAGAAGGAAAGGCACTTGATT-GAGAG--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCTCGCAA-TATCTCGTTTTTTA-ATTATC-TTAACTTCCTTTCACCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AACAAAATTCTCATCAAAACAATACCAT
gi|19699 : CAAGGATTTATACA--GAGGAGAAAAGGCAACTGTTT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAATATCT
gi|19700 : CAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-AAGAT--T--TTG---T-GAATGCTCAC-ATATTCACGCA
gi|19701 : CAACGAATTATATA--AAGAAGGAAAGACAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTGACGC-ATATCTCGCAATTATCT
gi|19702 : CAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTCGtaat
gi|19703 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCCCAC-TTATTCACGCAAAATCTCG
gi|19704 : CAAGGATTTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCACGCAAAACCTCGCAA-AATCTCGTTTTC-A-ATAATC-TTA
gi|19705 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--ATG---T-GAACACTCGC-ATATTCATGCAAAATCTCG
gi|19718 : AAGGAATTATATA--GAGAAGGAAATACAACTGATT-GACAG--T--TTG---T-GAATGCTCTC-GTATTCACGCA----------A-TATCTCGTTTTC-A-ATTATT-GTGACTTCCATTCACCTCAGG----AAC---ACAAATAAAAATTCTTTCATTGCAG-AATGAAATTCTCATCAAAACAATACCGT
gi|19719 : AAGGAATTATATA--GAGAAGGAAATGCAATTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATCTCGTTTTT-A-ATTATC-TTA
gi|19724 : GAATTATATA--GAGAAGAAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-ATATTCACACAAA-----------ATCTCGTTTTC-A-GTTATC-TTAATGTCCATTCATCTCA-G----AAC---ACAAATCAAAATGCTTACATTGCAG-AATGAAATTCTAATTAAAACAATACCAT
gi|19725 : GAATTATAAA--GAAAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAAAGCTCGT-GTATTCACGCAAAATCTCG
gi|19726 : GAATTATATA--GAGAAGGAAAAGCAACTTATT-GAGAT--T--TTG---T-AAA-GCTTGCAATATTCATGCAAAATCTCACAA-AATATTTTTTTC-A-ATTATC-TGAACTTCCAACCATCTCAAG----AAT---ACAAATTAAAATTCTTACTTTGCAG-AATGAAATTCTCAACAAAACAAGACC
gi|19729 : AATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTAGC-GTATTCACACAAAATCTCACAA-TATCTCGTTTTT-A-ATTATC-TTCAC
blockSeqs : T C T ATCC GTG A T
blockSeqs : . . . CAGG . . T
blockSeqs : . . . . . . T
blockSeqs : . . . . . . C
blockSeqs : . . . . . . C
blockSeqs : . . . . . . A
blockSeqs : . . . . . . G
blockSeqs : . . . . . . G
blockSeqs : . . . . . . C
blockSeqs : . . . . . . C
blockSeqs : . . . . . . C
blockSeqs : . . . . . . G
blockSeqs : . . . . . . G
blockSeqs : . . . . . . C
blockSeqs : . . . . . . G
blockSeqs : . . . . . . A
blockSeqs : . . . . . . T
blockSeqs : . . . . C
blockSeqs : . . . . C
blockSeqs : . . . . C
blockSeqs : . . . . C
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . .
blockSeqCons :
originalCons : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
finalCons : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
Alignments
lowQualScore : 00 0 00 00 000 0 0 0 1 1 1 9999 333 1 1
lowQualScore : .. . .. .. ... . . . . . . .... ... . .
lowQualScore : 66 4 66 66 777 4 4 9 2 2 2 4444 999 8 6
consensus : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
Reference ( family-207 ) : ACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACAATACCAT
gi|19569 : ACCAAAGAATTATACT--GAGATGGAAAAGCAAGTGATT-GCGA---T--TTG---T-AAAAGCTTGC-GTATTCACACAATATCTTG
gi|19569 : ttttttttatatcccttCTTACTTTGCAG-AATGAAATTTTAAACAAAACAAGACCATtgaattattattggccttactttgcagaatgaaattttaaacaaaacaagaccat
gi|19570 : ttttttttatatcccttaccaaagaattatactgagatggaaaagcaagtgattgcgatttgtaaaagcttgcgtattcacacaatatcttgtgaattattattggcCTTGCGTTGCAA-AAGGAAATTTTAAACAAAACAAGACCAT
gi|19571 : ttttttttatattccttaccaatgatttatactgagatggaaaagcaagtgatttgggtttgtaaaagcttgcatattgacacactatcttgtgtgttattaatggcACCAAAGAGTTATACT--GAGATGGAAAAACAACTAATTTGGG----T--TTG---T-AAAAGCTTGC-GTATTCACACACTATCT
gi|19571 : ttttttttctatcccttATTAATGTCCTGACGTTGCAG-AAGAAAATTTGAAACAAAACAAGACCATtatgagttattaatgtcctgacgttgcagaagaaaatttgaaacaaaacaagaccat
gi|19572 : ttttttttctatcccttaccaaagagttatactgagatggaaaaacaactaatttgggtttgtaaaagcttgcgtattcacacactatcttatgagttACCAACGAGTTATACT--GAGATGGAAAAGCAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-ATATTCACACACTATCTTGAAA-T------TTTTT-A-ATGGCC-TTA
gi|19572 : tcttgtttatttcccttCTTACATTGCAG-AAGGAAATTTTAACCAAAACAAGACCATcattgcagaaggaaattttaaccaaaacaagaccat
gi|19573 : tcttgtttatttcccttaccaacgagttatactgagatggaaaagcaagtgattggggttttgtaaaagcttgcatattcacacactatcttgaaattttttaatggcACCAAAGAATTATACT--GAGATGGAAAAGTAAGTGATT-GGGGT--T--TTG---T-AAAAGCTTGC-GTGTTCACACACTATCTTG
gi|19574 : ttctttttatattccttACCAAGGAATTATACA--GAGAAGGAAAGGCAACTGATT-GGGAT--T--TTG---C-AAAAGCCCGC-TTATTCACGCAAA-----------ATCTTGTTTTC-A-GTTATC-TTAAtgagttattaatggccttacgttacataacaaaacaagaccat
gi|19575 : tttattttgtattgtcatttcaATCAATGCATTATATA--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTTGC-GTATTCACACAAAATCTTGt
gi|19576 : ttttttttaaaaatccaacccaaCCAAGGAATTATATA--CAGAAGGAAAGGCAACTGACT-GAGAT--T--GTG---T-GAACGCTTGC-GTATTCACGCAAAATCT
gi|19577 : tttcttggttataaccagttCAAGAAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGTT--T--TAG---T-GAACGTTTGT-GTATTTACACACAATCTCG
gi|19578 : tttttttaatggatgactagCAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAACGTTTGT-GTATTTACACAAA-----------ATCTCGTTTTT-A-ATTATC-TTA
gi|19579 : tttttttaatggatgactagACCAAGGACTTATATA--GAAAAGGAAAAGCAACTGATT-GAGAT--T--TTA---T-GAACGTTCGC-GTATTCACGCAAAACCT
gi|19582 : ttttttctaagttacATCAAGACATTATATG--GAGAAGGAAATGCAACTGATT-TAAAT--T--TTG---T-GAACGCTAGC-GTATTCACACAAAATCTCGCAA-TA--------TC-A-A-TGTCTTTAACTTCCAATCATCTCAGG----AAA---ACAAA-CAAAAagttttaaattttacacaatggaatactctacaaaatgagaccgt
gi|19585 : ttttgttaatcctACCAAGGAATTAAATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19588 : tttctatagcctaaACCCAGGAATTATATA--GAGAAGAAAAAGCAATTGATT-GAGGT--G--TTA-----GAATGATCGC-ATATCCACGCAAAATCTCG
gi|19594 : tttgtctgtctaCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCAC-ATATTCACGCAAG-----------ATCTTGTTTTT-A-ATTATC-TTACCTTTCAtga
gi|19595 : ttacattttagACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--AGG---T-GAATGCTGGC-ATATTCATGCAAGATCTCGCAA-CATCCTGTTTTT-A-ATTAAC-TTAACTTCCATTCATCT---------------CAAATCTAAATTCTTACATTGCAG-AATGAAATTCTCATCAAAACA
gi|19596 : tcatatctATCAAGGACGTATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAATGCTTGC-GTTTTCATGTAATATCTC
gi|19597 : ttataattattAGGAATTACATA--GAGAAGGAATGGCAAATGATT-GAGAT-----------T-GAACGATCGC-ATATTCACTCAAAATCTCACAC-TATCTTGTTCTA-ACATTAatga
gi|19597 : tacatgtcttatTTCTAACATTACAG-AATGAAATTCTCATCAAAACAATACCATcagaatgaaattctcatcaaaacaataccat
gi|19598 : tacatgtcttataggaattacatagagaaggaatggcaaatgattgagattgaacgatcgcatattcactcaaaatctcacactatcttgCCAAGGAATTATATA--AAGAAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19600 : tatgttgctcaagACCAAGGACTTATATA--GAGAAGGGAAAGCATGTGATT-AAGAT--G--TTA---T-AGACGCTCGC-GTATTTACGCAAAATCTCGCGA-
gi|19601 : tatcgctttaaCAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTTGCAA-TATCTCGTTTTT-A-ATTATC-TTA
gi|19603 : tatctttgtCAAGGAATTATATA--GTGAAGGAAATACAACTGATT-GAGAG--T--TTG---T-GAACGTTTGT-GTATTCATGCAAAATCTCGCAA-TAT
gi|19605 : cccttaaCAAGGAATTATATA--GAGACGGAAACGCAAATGTTT-GAGAG--T--TTT---TAGAACACTCAT-GTATTCACGCACAATCTCGt
gi|19606 : ccttaAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCG
gi|19607 : cttactCAAGGACTTATATA--AAGAAGGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACACTCGC-GTATTCACGCAAAATCTGGCGA-
gi|19608 : cttaagtATCAAGGATTTATATA--AAGAAGGAAAAGCAACTCAAT-GAG-------TTGACAT-GAACGCTTGC-GTATTCACGC-ATATCTCGCGA-att
gi|19610 : cttCAAGGAATTATATA--GAGATGGATAGGCAACTGATT-GAGCT--T--TTG---T-GAATGCTTGT-GTATTCACGCATAATCT
gi|19611 : ttaaCAAGGATTTATATA--GAGACGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GTATTCACGCAAAATCTTG
gi|19612 : ttagACCATGGAATTATATA--GAGAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAACGCTTCT-GTATTCACTAAAAATCTGGCAT-TATCTTGTTTTC-A-ACTCTC-TTAACTTCCATTCACCTCAGG----AAC---ACAAATCAAAACTCTTACATTGCAG-AATGAAATTATCATCAAAACAATACCAT
gi|19613 : ttACCAAGGACTTATATA--GTGAAGGAAAAGCAACTGACT-GAGAT--G--TTA---T-GAATGCTTGT-GTATTCACGCAAAATCTTG
gi|19614 : ttCAAAGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGGT--T--TTG---T-GAACACTCCC-GTATTCAt
gi|19615 : ttaAAGGAATTATATA--GAGAAAGAAATGCAACTGATT-GACAG--T--TTG---T-GAAAACTCGC-GTATTCACGCAAAATCTCG
gi|19616 : ttattACCAAGGGATTATATA--GAGAAGGAAAAACAACTGATG-GAAAA--T--TTG---T-GAACGCTTGC-GTATTCGCGCAAAATCTCG
gi|19617 : ttACCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--GAG---T-GAACGCTCGC-GTATTCACGGAAAATCTCGCAA-TATCTCGTTTTT-A-TTTATC-TTAACGTCCATTTATCTCAGG----AAT---ACAAATCAAACTTCTTACACTGCAG-AATGAAATTGTCACCAAAACAATACCAT
gi|19622 : ttCCAAGGAATTATATA--GAGATGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GACCGCTTAC-GTATTCGCACAAAATCTCGCAA-TATCTTGTTTTC-A-GTTATC-TTAACTTCCATTCAT-----------AT---ACATATCAAAATTCTTACATTGCAG-AATGAAATTGTAATCAAAACAATACCA
gi|19623 : tgACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGATTGT-GTATTCACGCA----------A-TATCTCGTTTTC-A-ATTATC-TTAAATCCCATTCATCTAAGG----AAC---ACAAATCAAAATTCTTACATTGCTG-AATGAAATTCTCATCAAAATAATACCAT
gi|19624 : tATCAAGGAATTATATA--GAGAAGGAAAGGCAATTAATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTGCAA-TATCTCGTTTTC-A-ATTGTC-TTA
gi|19625 : tCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCTT-GTATTTACACAAAATCTCG
gi|19627 : tagCAAGGAATTATATA--GAGAAGGAAAGACAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTTG
gi|19628 : taaCAAGGAATTACAAA--GAGAGGAAAAGGCAACTGATT-GGGAT--T--TTG---T-GAACGCTTGC-GTATTCGCACATAATTTCGCAA-TATCTCGTTTTC-A-ATTATC-TTTACTAACATTCATCTCAGG----AAC---ACAAATCAATGATCTTACATTGCAG-AATGAAATTCTAGTCAAAACAA
gi|19629 : tagACCAAGGAATTATATG--GAGAAGGAAAGGCATATGATT-GATA---T--TGG---T-GAACGCTTGC-GTATTCACGCA
gi|19630 : tATCATGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GGGAT--T--TTG---T-GAACGCTCAC-GTATTCACGCTAAATATC
gi|19631 : tATCATGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAG--T--TAG---T-GAATGCTCGC-GTATTCACGCAAAATCTTG
gi|19632 : tACCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATT
gi|19633 : tACCAAAGAATTATATA--GAGAAGGAAGGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCTCTCAAAATCTCGCAG-TATCTCGTTTTC-A-ATTATC-TTAACTTCCATTCATCTCAGG----AACGTGACAAATTAAAATTCTTACATTGCAT-AATGAAATTCTCATCAAAACAATACCATtgca
gi|19634 : tCAAGGAATTATATA--GAAAAGGAAAGGCAACTGATT-GGGAT--T--TTG---T-GAATGTTCAT-GTATTTACACAAAATCTCG
gi|19635 : tagATCAAAGAATGATATA--GAGAAGGAATGGCAACTAATT-GAGAT--T--TTG---T-GAATGCTCGC-GTTTTCACGCAAAATCTTG
gi|19636 : tATCAAGGACTTATATATAGAGAAGGAAAAGAAAATGATT-GAGATGTTAGTTA---T-GAACGCTTGC-GTATTCACGCAAAATCTCACGA-
gi|19644 : tATCAAGGAACTATATA--GAGAAGGAAAAGCAAATGATT-GAGGT--T--TTG---C-GAACGCTCGC-GTATTCACGTAAAATCTTGCAA-T
gi|19645 : ACAAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACGCTTGC-ATATTCACGCAAAATCTTGtact
gi|19646 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCTCGT-GTATTCACGCAAAATCTCGCAA-TGTCTCGTTTTT-A-ATTATC-TTCACTTCCATTCATCTCAGG-------------------AATTCTTACACTGCAGAAATGAAATTGTCATCGAAACAATACCAT
gi|19647 : ACCAAGGACGTATACA--GAGAAGGAAAAGCAACTGATT-GAGAT--G--TTG---T-TAACGCTCGC-ATATTCATGCAATATCTCGCGA-
gi|19648 : ACCAAAGAATTATATA--GAGAAGGAAAAGTAACTGATT-GAAAT--T--TTG---T-GAGCGCTCGC-GTATTTACGCAAAATCTCG
gi|19649 : ATCAAGGAATTATATT--GAGAAAGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATt
gi|19650 : ACCAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTGGC-GTATTCATGCAAATTCTTGCAA-TATCTTGTTTTT-A-GTTATC-TTAACTTCCATTCATCTCAGG----AAC---ACAAATCAAAACTCTTACACTGCAG-AATGAAATTGTCATCAAAACAATACCATt
gi|19651 : ACCAAGGAATTATATA--GGAAAGGAAAGGCAAATGGTT-GAGAT--T--TTG---T-GAACACTTGC-GTATTAACGCAAAATCTTGT----------TTTTT-A-ATTATC-TT
gi|19652 : ATCAAGGATTTCTATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAATATCTCGCAA-TATCTTGTTTTC-A-ATTGTC-TTA
gi|19653 : ATCAAGGAATTATATA--GAGGAGGAAAGGCAACTGTTT-GAGAT--T--GTG---T-AAACGCTCGC-ATATTCACGCAAAATCTTG
gi|19654 : ATCAAGGAATTATATA--GTGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTCACGCAAAATCTCG
gi|19655 : ACCAATGAATTATAAA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-TTATTCACGCAAAATCTCACAA-TATCTCGTTTTT-A-ATTATC-TTAAATTCCA
gi|19656 : ATCAAGGAATTATATA--GAGAAAGAAATGCAACTGACT-GAGAG--T--TTC---T-AAACGCTCGC-ATATTCACGCAAA-----------ATCTCATTTTC-A-ATCATC-TTAACTTCCATTCACCTCATGATCCAAC---ACAAATTAAGATTGTTACATTGCAG-AAGGAAATTCTCATCAAAACAATACCAT
gi|19657 : ACCAAGGAAATATATA--GAGAAGGAAAAGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-GAATTCACGCAAAGTCTTG
gi|19658 : ACCAAGGATTTATATT--GAATTGGAAAAGTAATTCATT-GAGAT--T--TTG---T-GAAAACTTGC-ATATTCGCGCAAAATCT
gi|19659 : ATCAAGGAATTATAAA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCT
gi|19660 : ATCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GATAG--T--TTG---T-GAACATTGGC-ATATTCACGCAAAATCTCG
gi|19661 : ATCAAGGAATTATATA--GAGAAGAAAAAGTGACAGATT-GAGTT--T--TTG---T-GAATGCTTGC-GTATTCACTTAAAGTCTCACAA-TATCTTGT
gi|19662 : ATCAATGACTTATATA--GAGTAGAAAAAGCAACTTATT-GAGAT--T--T-A---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCGA-
gi|19663 : ACCAAGGACTTATATA--GAGAAGAAAAAGAAACTGATT-GAGAT--G--TTA---T-CAATGTTTGC-GTATTCACCCAAAATCTCGCGA-attttt
gi|19664 : ATCAAGAAATTATAAA--GAGAAGGATAGGCAACTGGTT-GATAG--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19665 : ACCAAGGAATTATATA--GAAAAGGAAAGGCAAATGATT-GAGAT--T--TTA---T-GAACACTCGC-ATATTCAC
gi|19676 : CCAAGGAATTGTATA--GAGGAGGAAAGGTAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACTCA
gi|19677 : CTAAGGAATTATATA--GAGAAGGAAAGGCAATTGATT-GAGAT--A--TTG---T-GAACGTTCGC-ATATTCACACAAAATCTTGTAA-TATCTTGTTTTC-A-ATTATC-TTA
gi|19678 : CCAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-GAGAT--T--TTG---T-GAATGCTCGC-GTATTCACACAAAATCTCGCGA-
gi|19679 : CCAAGGAATTATATA--GAGAAAGAAAGGCAACTGATC-GAGAT--T--TGG---T-GAACGCTCGT-GTATTCACGAAATAGCTTGCAA-TATCTCGTTTTC-A-ATTGTC-TTA
gi|19686 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19687 : CAAGGAATTATATA--GAGAAGGAAAGGCAATGGAGT-GAGGT--T--TTG---T-AAACGCTTGC-ATATTCACGCAAAATCTTG
gi|19688 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GACAG--T--TTG---T-GAACACTCGC-ATATTCACGCAAAATCT
gi|19689 : CAAGGAATTATATA--GAGAAGGAAATGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTCGC-ATTTTCACGCAAAATTTTG-----------TTTTC-A-ATTATC-TTCACTTTCATTCATCCCAGGCAGGAAC---ATTAATCAAAATTCTTACATTGCAA-AAGGAAATTGTCATCAAAACAATACCAT
gi|19690 : CAAGGGATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCG
gi|19691 : CAAAGAATTATATA--GAAAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTCGC-GTATTCACACt
gi|19692 : CAAGGAATTATACA--GAGAAGGAAAGGTAGCTGATT-GAGAT--T--TTG---T-AAACGCTTGC-ATATTCACACAAAATCTCACAC-TATCTCGTTTAC-A-ATCAT------CTTCCATTAGTCTCGGG----AAC---AAAAATCAAAATTCTTACTTTGCAG-AATAAAATTACCATCAAAACAACACCAT
gi|19693 : AATGACTTGTATA--GAGACTGAAAAGCAACTGATT-GAGAT--G--TTA---T-GAACGCTTGT-GTATTCACACAAAATCT
gi|19694 : caCAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTT---T-GAAAGCTTAT-GTATTTACACAAAATCTCGtatga
gi|19695 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACGCTTGC-ATATTGACGCAAAATCTCG
gi|19696 : CAAGGAATTATATA--GAGAAGGAAATGCATCTGATT-CGGAT--T--TTG---T-GAACGCTCGC-GTATTCACGCAAAATCTCGCAA-TATCTCGTTTTC-A-ATTATT-TTAACTTCCATTTATCCCAGG----AAT---ATAAATCAAAATTCTTACATTGCAG-AATGAAATTTTCATCAAAACAATACCAT
gi|19697 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-AAACGCTCTT-GTATTTACACAAAATCTCACCA-TATCTCGTTTTC-A-ATGATC-TTA
gi|19698 : CAAGGAATTATAGA--GAGAAGGAAAGGCACTTGATT-GAGAG--T--TTG---T-GAACGCTCGC-GTATTCATGCAAAATCTCGCAA-TATCTCGTTTTTTA-ATTATC-TTAACTTCCTTTCACCTCAGG----AAC---ACAAATCAAAATTCTTACATTGCAG-AACAAAATTCTCATCAAAACAATACCAT
gi|19699 : CAAGGATTTATACA--GAGGAGAAAAGGCAACTGTTT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTCACGCAATATCT
gi|19700 : CAAGGAATTATATA--GAGAAGGAAAGGCAAATGATT-AAGAT--T--TTG---T-GAATGCTCAC-ATATTCACGCA
gi|19701 : CAACGAATTATATA--AAGAAGGAAAGACAACTGATT-GAGAT--T--GTG---T-GAACGCTCGC-GTATTGACGC-ATATCTCGCAATTATCT
gi|19702 : CAAGGAATTATATA--AAGAAGGAAAGGCAACTGATT-GATAT--T--TTG---T-GAACGCTCGT-GTATTCACGCAAAATCTCGtaat
gi|19703 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAATGCCCAC-TTATTCACGCAAAATCTCG
gi|19704 : CAAGGATTTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTA---T-GAACGCTCGC-GTATTCACGCAAAACCTCGCAA-AATCTCGTTTTC-A-ATAATC-TTA
gi|19705 : CAAGGAATTATATA--GAGAAGGAAAGGCAACTGACT-GAGAT--T--ATG---T-GAACACTCGC-ATATTCATGCAAAATCTCG
gi|19718 : AAGGAATTATATA--GAGAAGGAAATACAACTGATT-GACAG--T--TTG---T-GAATGCTCTC-GTATTCACGCA----------A-TATCTCGTTTTC-A-ATTATT-GTGACTTCCATTCACCTCAGG----AAC---ACAAATAAAAATTCTTTCATTGCAG-AATGAAATTCTCATCAAAACAATACCGT
gi|19719 : AAGGAATTATATA--GAGAAGGAAATGCAATTGATT-GAGAT--T--TTG---T-GAACGCTCGC-ATATTCACGCAAAATCTCGCAA-TATCTCGTTTTT-A-ATTATC-TTA
gi|19724 : GAATTATATA--GAGAAGAAAAGGCAACTGATT-GAGAT--T--TTG---T-GAACACTCGC-ATATTCACACAAA-----------ATCTCGTTTTC-A-GTTATC-TTAATGTCCATTCATCTCA-G----AAC---ACAAATCAAAATGCTTACATTGCAG-AATGAAATTCTAATTAAAACAATACCAT
gi|19725 : GAATTATAAA--GAAAAGGAAAGGCAACTGATT-AAGAT--T--TTG---T-GAAAGCTCGT-GTATTCACGCAAAATCTCG
gi|19726 : GAATTATATA--GAGAAGGAAAAGCAACTTATT-GAGAT--T--TTG---T-AAA-GCTTGCAATATTCATGCAAAATCTCACAA-AATATTTTTTTC-A-ATTATC-TGAACTTCCAACCATCTCAAG----AAT---ACAAATTAAAATTCTTACTTTGCAG-AATGAAATTCTCAACAAAACAAGACC
gi|19729 : AATTATATA--GAGAAGGAAAGGCAACTGATT-GAGAT--T--TTG---T-GAAAGCTAGC-GTATTCACACAAAATCTCACAA-TATCTCGTTTTT-A-ATTATC-TTCAC