lowQualScore : 0000 00 11 3 4 0 0 11 000 0
lowQualScore : .... .. .. . . . . .. ... .
lowQualScore : 8888 55 11 0 0 4 4 77 777 4
consensus : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
Reference ( gi|164227 ) : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164233 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164270 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164259 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164213 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTcta
gi|164212 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164326 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAG-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCTAgg
gi|164244 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTTAGACACG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164236 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCACTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164218 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCAAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164216 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164320 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAAGCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TCAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164228 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164311 : AGGCGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGGGC-TAATCGGGCCCGGCT
gi|164305 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164255 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164316 : AGACGAATGATAATGAGACACAATG----CCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164232 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164321 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACAACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164345 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164280 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-TGGATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164354 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGATTGAGC-TAATCGGGCCCGGCTA
gi|164357 : AGACGAATGATAATGAAACACAATG----TCGTATA--CCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TATTCGGGCCCGGCT
gi|164291 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGAA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAACCGGGCCCGGCT
gi|164330 : AGACAAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164249 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATTGGACCCGGCT
gi|164264 : AGACGAATGATAATTAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGGCCCGGCT
gi|164234 : AGACGAATGATAATGAGACACAATG----TCGTTTA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCTA
gi|164343 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---TGACTGAGC-TAATCGGGCCCGg
gi|164221 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGGT-T-GACAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164208 : AGACGAATGCTAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164289 : AGACGAATGATAACGAGACACAATG----TCGTATA--TAAATCATCACGGA--AACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CAACTAAGC-TAATCGGGCCCGGCT
gi|164369 : AGACGAATGATAGTGAGACACAATG----TCGTATA--TCAATCATAACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGgg
gi|164209 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGTCCCCTGGAT-T-GAAAGTCAGACGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164355 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GGCTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATATTCAGACGCA--TAAC---TGACTGAGC-TAATCGGGCCCG
gi|164317 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTTAGACATG--CAAC---CGACTGAGG-TAATCGGGCCCGGCT
gi|164243 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTTGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|164346 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGTAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGAG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164205 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-TATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGACTA
gi|164295 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGT--GACTGTTGCCGGGCGGGG-ATTCGAACTCAGGACCCCTGGAT-T-GATAGTCAGACGCT--TAAC---CGACTGAGC-TAATCGGGCCCGGCTg
gi|164315 : AGACGAATGATAATGAGACACAATG----TCGTATATATCAATCATCACGGA--GACTGTGGCCGGGCGGGGAATTCGAACTCACGACCTCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCTGGCCCGGCT
gi|164271 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCGctag
gi|164367 : AGACGAATGATAATGAGAAACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTAGAACTCACGACCCCTGGAT-T-GATTGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164247 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAACTCACGACCCATGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164240 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAGTCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCATACGCG--TAAC---CGACTGAGC-TAACCGGGCCCG
gi|164328 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGTGGGAGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGACCCG
gi|164318 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGA-ATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACATG--TAAC---CGACTGAGC-TAATCAGGCCCGGCTA
gi|164309 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGG-TAATCGGGGCC
gi|164215 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TTATCGGGCCCG
gi|164248 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGCCGGG--ATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164290 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAAATCACGACCCCTGGAT-T-GATAATCAGATGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164223 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCAGGCGGGGG-TTTGAACTCACGACCCCTGAAT-T-GATAGTCAGATGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164347 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCACCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGTG--TAAC---CGATTGAGC-TAATCGGG
gi|164323 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAA
gi|164276 : AGACAAATGATAATGAGACGCAATG----GCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGCCAGACGCA--TAAC---CGACTGAGC-TAATCGGGTCCGg
gi|164325 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAATCATCTCGGA--GACTGTTGCCGAGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATTGGGCCCGTCTA
gi|164300 : AGACGAATAATAATGAGACGCAATG----ACGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACAGAGC-TAATCGGGCCCGGCT
gi|164267 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGG-ATTCGATCTCACGACCCCTGGAT-T-GATAGTCAGACTCA--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164333 : AGACAAATGATAACGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATCTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--GAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164308 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGTCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGTGCCCG
gi|164220 : AGACGAATGATAATGTGACACAATG----TTGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGATCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTAAGC-TAATCGGGCCCGGCTA
gi|164251 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGAGC-GGGGATTCGAACTCACGACCCCTGGAT-A-GATAGTCAGAAGCG--TAAC---TGACTGAGC-TTATCGGGCCCGGCT
gi|164348 : AGATGAATGATAATGATACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ACTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAAC-TAATCGGGCCC
gi|164241 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGTG--TAAC---TGACTGAGC-TGATCGGGCCCGACT
gi|164222 : AGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GATTGTTGCCGGGCTGGGGATTTGAATTCACGAACCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TCATCGGGCCCGGCT
gi|164242 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCTATCATCACGGA--GACTGTCGCCGGGCGGGA-ATTCGAACTCACGAGCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGATCCGGCTA
gi|164299 : AGTCGAATGACAATGAGACACAATG----TCGTATA--TCGATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATTATCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCT
gi|164206 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGC-GGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTCAGACGCG--AAAC---CGACTGAGC-TTATTGGGCCCG
gi|164340 : AGACGAATGACAATGAGACACAATG----CCGTATG--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAGCTCACGACCCCTGGAT-T-AATAGTCAGATGCA--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164273 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAGTTATCATGGA--GACTGTTGCCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATGGTCAAACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164349 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAATCAACACGGA--GACTGTTGCCGGGTGGGGGGTTCGAACTCACAACCCCTGGAT-T-GATAGTCAGATGCC--TAAC---CGACTTAGC-TAATCAGGCCCGGCT
gi|164258 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TTAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGGTGCG--ATAC---CGACTGAGC-TAATCGAACCCGGCTA
gi|164239 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATAATCACGGA--GACTGTTGCCGGAC-GGGGATTCGAACTCGCGACCCCTGAAT-T-GATAGTCAGAATCG--TAAC---CGACTGAGC-TAATCGGATCCGGCT
gi|164283 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGT-GGGGATTCGAACGCACGTCCCCTTGAT-T-GATAGTCAGTCGCG--TAAC---CGACTGAGC-TAATCGGGCCTGGCT
gi|164364 : AGACGAATGATAATGCGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGACGGGCGGGG-ATTCAAACTCACGGCCCCTGGAT-T-GATAGTCAGACAGG--TAAC---CGATTGAGC-TAATTGGGCCCGGCTcta
gi|164253 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGC-GGGGACTTGAACTCACGATCCCTGGAT-T-GATAGTCAGCCGCT--AAAC---CGACTAAGC-TAATCAGACCCGGCT
gi|164185 : AGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAAATCACGACCCCTGTAT-T-GATAGTCAGACGCG--CAAC---CGACTGAGC-T
gi|164184 : atAGACGAATGGTAATGAGACACAATG----TCGTATA--TCAGTCACCACGAG--GACTGTTGCCGGGCGGGG-ATTCGAACTTACGACCCCTGGAT-T-GAAATTCAGACGCG--TAAC---CGATTGAGC-TAATCGGGCCCG
gi|164362 : acAGACGAATGATTATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCACTAGCT-T-GATAGTCAGACGCG--TATT---CGACTCAGC-TTATCGGGCCCG
gi|164306 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCCGGAT-T-GATAGACAGGCATG--TTAC---CGACTTAGC-TAATCGGG
gi|164363 : AGACGAATGATAATGAGACACAATG----TCGTATA--GCAATCATCACGGA--AACTGTTACCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACCAG--TTAC---CGACTttc
gi|164327 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAAACATCACGGA--GATTGTGGCCGAGC-GGGGATTCGAACTCACGATCTCTGGAT-T-GACAGTCAGACGCGC-TAA----CGACTGAGC-TTATCGGG
gi|164296 : AGACGAATGACAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTGGCCGGGT-GGGGATTCGAACTCACGACCTCTGGAT-T-GAAAGTCAGATGCGC-TAA----TGACGGATC-TTATCGGATCCGG
gi|164312 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTGTCATGGA--GAGTGTGACCGGTCGGCG-ATTCGAACTCACGACCCTTAAAC-T-GATAGCCAGACGTG--CTAC---CGACTGAGC-TAATCGGGTCCGtct
gi|164256 : AGACAAATGATAATGAGACGCAATG----ACGTATA--TCAAACATCACGGA--GATAGTGGCCGAGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-GATAGTCAGACACGCTTA-----CGACTGAGT-TTATCGGGCCCcc
gi|164285 : AGACGAATAATACAGAGACGCAATG----TCGTATA--TTAATCATCACAGA--GATTGTGGCCGGGC-GGGGATTCGAACTCACGACCTCTGAAT-T-GATA---------G--TAAC---CGACTGAGC-TAATCGGGCCatct
gi|164370 : AGACGAATCATAATGAGACACAATG----TCATATA--TCAACCATCACGGA--TATTGTGGCCGGGC-GGGGATTCGAACTCTTGA-CCCTGGAT-T-GATAGTCAGACG-----AACTAACGATCGGGC-TTATCGGGCCCG
gi|164352 : AGACGAATGATAATGAGACGCAATG----TCGTATT--ACAACCATCACGGA--GACAGTGGTCGGGC-TGGGATTCGAACTCACGAACCCTGGAT-T-GATAGTCAGACGCGC-TAA----CAACTGAGC-T
gi|164262 : AGACGAATGATAATGAGACACAGTG----TCGTATA--TCAATCACCACAAA--GAATGTGGCCGGGC-GGGGATTCGAACCAACTACGCCTGGCT-T-TATGATCAGACGCA--CTAC---TGACTGAGC-TTACCGGGTCCGGCT
gi|163603 : AGACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGCGGGTC
gi|163604 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaagcgcgattgactatcaatccaatggtcatgcgtttgaatcccctcccggcaacactctgtatatctatAGACGAATCCCATTGAGACGCAATG----TCGTATA--ACAATTAACACGGAATGA--GTGGCTGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGAGGGTCCGTCTAgtctag
gi|163611 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccgggctaagacggaagcgcgattgactatcaatccaacggtcatgcgttcgaatcccctcccggccacactctgtatatctatAGACGAATACCAATGAGACGCAATG----CCGTATA--ACAATAAATACGGA--AAGAGTGGCCGGGT-GGGGACTCGAACGCCCAGGCCCTGATT-T-GAAGGTC---------CAAC---CGACTAAGTATAGT-GGGCCCGTCTAg
gi|163608 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccgggctaagacggaagcgcgtttgactatcaatcaaatggtcatgcgttcgaatccccttccggccacactctgtatatctatAGAAGAATCCTAATGAGATGCAATG----TCGCATA--ACAATTAACACGGA--AAAAACGGCCGGGC-GGGGACTCGAACACACGGGTCCT-GATAT-AAAGGTCA---------AAC---CGACTAAAC-TTAGCGGGTCCGTCTAg
gi|163612 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatcgcggttgactatcaatccaatggtcgtgcgttcgaatttcctcccggccacactctgtatatctatAGACGAATCCCAATGAGGC------------GTATA--ACAATTAACACGGAAAGAGTGT--CTGGGCGGGT-ACTCGAACGCACGGGCTCTGATT-T-GAAGGTC---------TAAC---CGACTAAGC-TTAGCGGGCCCGTCTAg
gi|163610 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccgggctaagacggaagcgagtctgaccatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatacatatACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAg
gi|163609 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatacACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGTGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAg
gi|164695 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatacAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|163604 : CAATGGGATTCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCGTTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-
gi|163603 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccgg----TCGTCTA--TAGAT-AT-ACAGA--G--TGTTGCCGGG-AGGGGATTCAAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--agacgcaatgtcgtataacaattaacacggaatgagtggctgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagagggtccgtctag
gi|163610 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaag----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-atcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagcgggtcgtctag
gi|163609 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccgg----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-atcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtctag
gi|163611 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgg----TCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGA-AGGGGATTCGAACGCATGACCATTTGAT-T-GATAGTCAAACGCG--CTTC---CGTCTTAGC-atcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgtgtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtcta
gi|163608 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccggA--GAGTGTGGCCGGG-AGGAAATTCGAACGCACGACCATTGGAT-T-GATAGTCAACCGCG--ataccaatgagacgcaatgccgtataacaataaatacggaaagagtggccgggtggggactcgaacgcccaggccctgatttgaaggtccaaccgactaagtatagtgggcccgtctag
gi|163612 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATGGTCAGACTCG--CTTC---CGTCTTAGC-gtatatctatagaagaatcctaatgagatgcaatgtcgcataacaattaacacggaaaaaacggccgggcggggactcgaacacacgggtcctgatataaaggtcaaaccgactaaacttagcgggtccgtctag
gi|163613 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccggA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATTGCG--CTTC---CGTCTTAGC-gtatacatatagacgaatcccaatgaggcgtataacaattaacacggaaagagtgtctgggcgggtactcgaacgcacgggctctgatttgaaggtctaaccgactaagcttagcgggcccgtctag
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|163751 ): ATCATCATCATCACCAACAACAACAGCATCGTCAACATCATCATCACCATCATCATTTATGCAGTAATAGCGGCATCATCAGTTTAATCAACATCAGTAGCAACAGCTGCAACAGCTAATAAATAATCCCAATCAACAGTATTATCAGCACCACCAAACGGTCAAATCACTAACAACACAACTGTCAGCATAACTATCATTGCAATAGCCTCATATTACAATCACCATT
Unaligned ( gi|163618 ): ATCATCATCATCATCATCATCATCATCAACAATAACATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCANNNNNNNNNNCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCAACATCACCATCATCATCATTATCATCATCATCATCATCATCACCACCAC
Alignments
lowQualScore : 0000 00 11 2 3 0 0 11 000 0
lowQualScore : .... .. .. . . . . .. ... .
lowQualScore : 8888 55 00 9 9 4 4 77 777 4
consensus : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
Reference ( family-16 ) : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|163603 : ----TCGTCTA--TAGAT-AT-ACAGA--G--TGTTGCCGGG-AGGGGATTCAAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--
gi|163603 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaagAGACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGCGGGTCatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagcgggtcgtctag
gi|163604 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaagcgcgattgactatcaatccaatggtcatgcgtttgaatcccctcccggcaacactctgtatatctatCAATGGGATTCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCGTTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-gtctag
gi|163604 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccggAGACGAATCCCATTGAGACGCAATG----TCGTATA--ACAATTAACACGGAATGA--GTGGCTGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGAGGGTCCGTCTAagacgcaatgtcgtataacaattaacacggaatgagtggctgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagagggtccgtctag
gi|163608 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccgggctaagacggaagcgcgattgactatcaatccaacggtcatgcgttcgaatcccctcccggccacactctgtatatctatA--GAGTGTGGCCGGG-AGGAAATTCGAACGCACGACCATTGGAT-T-GATAGTCAACCGCG--g
gi|163608 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatAGAAGAATCCTAATGAGATGCAATG----TCGCATA--ACAATTAACACGGA--AAAAACGGCCGGGC-GGGGACTCGAACACACGGGTCCT-GATAT-AAAGGTCA---------AAC---CGACTAAAC-TTAGCGGGTCCGTCTAgtatatctatagaagaatcctaatgagatgcaatgtcgcataacaattaacacggaaaaaacggccgggcggggactcgaacacacgggtcctgatataaaggtcaaaccgactaaacttagcgggtccgtctag
gi|163609 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatcgcggttgactatcaatccaatggtcgtgcgttcgaatttcctcccggccacactctgtatatctat----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-g
gi|163609 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccggACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGTGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgtgtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtcta
gi|163610 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatac----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-
gi|163610 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccggACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtctag
gi|163611 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatac----TCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGA-AGGGGATTCGAACGCATGACCATTTGAT-T-GATAGTCAAACGCG--CTTC---CGTCTTAGC-g
gi|163611 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccggAGACGAATACCAATGAGACGCAATG----CCGTATA--ACAATAAATACGGA--AAGAGTGGCCGGGT-GGGGACTCGAACGCCCAGGCCCTGATT-T-GAAGGTC---------CAAC---CGACTAAGTATAGT-GGGCCCGTCTAataccaatgagacgcaatgccgtataacaataaatacggaaagagtggccgggtggggactcgaacgcccaggccctgatttgaaggtccaaccgactaagtatagtgggcccgtctag
gi|163612 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccgggctaagacggaagcgcgtttgactatcaatcaaatggtcatgcgttcgaatccccttccggccacactctgtatatctatA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATGGTCAGACTCG--CTTC---CGTCTTAGC-g
gi|163612 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccggAGACGAATCCCAATGAGGC------------GTATA--ACAATTAACACGGAAAGAGTGT--CTGGGCGGGT-ACTCGAACGCACGGGCTCTGATT-T-GAAGGTC---------TAAC---CGACTAAGC-TTAGCGGGCCCGTCTAgtatacatatagacgaatcccaatgaggcgtataacaattaacacggaaagagtgtctgggcgggtactcgaacgcacgggctctgatttgaaggtctaaccgactaagcttagcgggcccgtctag
gi|163613 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccgggctaagacggaagcgagtctgaccatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatacatatA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATTGCG--CTTC---CGTCTTAGC-g
gi|164184 : atcatcatcatcatcatcatcatcatcatcatcaatgataatcagcatcaatcatcataaatcgttcttttatgcagcaacaacagcataattcgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcttcatattataaccaccactccggAGACGAATGGTAATGAGACACAATG----TCGTATA--TCAGTCACCACGAG--GACTGTTGCCGGGCGGGG-ATTCGAACTTACGACCCCTGGAT-T-GAAATTCAGACGCG--TAAC---CGATTGAGC-TAATCGGGCCCGgtatatctatagatgggtcctgat
gi|164185 : acAGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAAATCACGACCCCTGTAT-T-GATAGTCAGACGCG--CAAC---CGACTGAGC-T
gi|164205 : atAGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-TATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGACTA
gi|164206 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGC-GGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTCAGACGCG--AAAC---CGACTGAGC-TTATTGGGCCCGg
gi|164208 : AGACGAATGCTAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164209 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGTCCCCTGGAT-T-GAAAGTCAGACGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164212 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164213 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTgg
gi|164215 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TTATCGGGCCCG
gi|164216 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164218 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCAAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164220 : AGACGAATGATAATGTGACACAATG----TTGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGATCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTAAGC-TAATCGGGCCCGGCTA
gi|164221 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGGT-T-GACAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164222 : AGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GATTGTTGCCGGGCTGGGGATTTGAATTCACGAACCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TCATCGGGCCCGGCT
gi|164223 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCAGGCGGGGG-TTTGAACTCACGACCCCTGAAT-T-GATAGTCAGATGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164227 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164228 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164232 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164233 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164234 : AGACGAATGATAATGAGACACAATG----TCGTTTA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCTA
gi|164236 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCACTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTAg
gi|164239 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATAATCACGGA--GACTGTTGCCGGAC-GGGGATTCGAACTCGCGACCCCTGAAT-T-GATAGTCAGAATCG--TAAC---CGACTGAGC-TAATCGGATCCGGCT
gi|164240 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAGTCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCATACGCG--TAAC---CGACTGAGC-TAACCGGGCCCG
gi|164241 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGTG--TAAC---TGACTGAGC-TGATCGGGCCCGACT
gi|164242 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCTATCATCACGGA--GACTGTCGCCGGGCGGGA-ATTCGAACTCACGAGCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGATCCGGCTA
gi|164243 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTTGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|164244 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTTAGACACG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164247 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAACTCACGACCCATGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164248 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGCCGGG--ATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164249 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATTGGACCCGGCT
gi|164251 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGAGC-GGGGATTCGAACTCACGACCCCTGGAT-A-GATAGTCAGAAGCG--TAAC---TGACTGAGC-TTATCGGGCCCGGCT
gi|164253 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGC-GGGGACTTGAACTCACGATCCCTGGAT-T-GATAGTCAGCCGCT--AAAC---CGACTAAGC-TAATCAGACCCGGCT
gi|164255 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164256 : AGACAAATGATAATGAGACGCAATG----ACGTATA--TCAAACATCACGGA--GATAGTGGCCGAGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-GATAGTCAGACACGCTTA-----CGACTGAGT-TTATCGGGCCC
gi|164258 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TTAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGGTGCG--ATAC---CGACTGAGC-TAATCGAACCCGGCTAatct
gi|164259 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164262 : AGACGAATGATAATGAGACACAGTG----TCGTATA--TCAATCACCACAAA--GAATGTGGCCGGGC-GGGGATTCGAACCAACTACGCCTGGCT-T-TATGATCAGACGCA--CTAC---TGACTGAGC-TTACCGGGTCCGGCTcta
gi|164264 : AGACGAATGATAATTAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGGCCCGGCT
gi|164267 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGG-ATTCGATCTCACGACCCCTGGAT-T-GATAGTCAGACTCA--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164270 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164271 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCG
gi|164273 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAGTTATCATGGA--GACTGTTGCCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATGGTCAAACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164276 : AGACAAATGATAATGAGACGCAATG----GCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGCCAGACGCA--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|164280 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-TGGATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164283 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGT-GGGGATTCGAACGCACGTCCCCTTGAT-T-GATAGTCAGTCGCG--TAAC---CGACTGAGC-TAATCGGGCCTGGCT
gi|164285 : AGACGAATAATACAGAGACGCAATG----TCGTATA--TTAATCATCACAGA--GATTGTGGCCGGGC-GGGGATTCGAACTCACGACCTCTGAAT-T-GATA---------G--TAAC---CGACTGAGC-TAATCGGGCCcta
gi|164289 : AGACGAATGATAACGAGACACAATG----TCGTATA--TAAATCATCACGGA--AACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CAACTAAGC-TAATCGGGCCCGGCT
gi|164290 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAAATCACGACCCCTGGAT-T-GATAATCAGATGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTAgg
gi|164291 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGAA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAACCGGGCCCGGCT
gi|164295 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGT--GACTGTTGCCGGGCGGGG-ATTCGAACTCAGGACCCCTGGAT-T-GATAGTCAGACGCT--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164296 : AGACGAATGACAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTGGCCGGGT-GGGGATTCGAACTCACGACCTCTGGAT-T-GAAAGTCAGATGCGC-TAA----TGACGGATC-TTATCGGATCCGG
gi|164299 : AGTCGAATGACAATGAGACACAATG----TCGTATA--TCGATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATTATCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCTtct
gi|164300 : AGACGAATAATAATGAGACGCAATG----ACGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACAGAGC-TAATCGGGCCCGGCT
gi|164305 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164306 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCCGGAT-T-GATAGACAGGCATG--TTAC---CGACTTAGC-TAATCGGG
gi|164308 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGTCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGTGCCCGttc
gi|164309 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGG-TAATCGGGGCC
gi|164311 : AGGCGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGGGC-TAATCGGGCCCGGCT
gi|164312 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTGTCATGGA--GAGTGTGACCGGTCGGCG-ATTCGAACTCACGACCCTTAAAC-T-GATAGCCAGACGTG--CTAC---CGACTGAGC-TAATCGGGTCCG
gi|164315 : AGACGAATGATAATGAGACACAATG----TCGTATATATCAATCATCACGGA--GACTGTGGCCGGGCGGGGAATTCGAACTCACGACCTCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCTGGCCCGGCTcc
gi|164316 : AGACGAATGATAATGAGACACAATG----CCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCTctag
gi|164317 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTTAGACATG--CAAC---CGACTGAGG-TAATCGGGCCCGGCT
gi|164318 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGA-ATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACATG--TAAC---CGACTGAGC-TAATCAGGCCCGGCTA
gi|164320 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAAGCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TCAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164321 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACAACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164323 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAA
gi|164325 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAATCATCTCGGA--GACTGTTGCCGAGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATTGGGCCCGTCTAg
gi|164326 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAG-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCTA
gi|164327 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAAACATCACGGA--GATTGTGGCCGAGC-GGGGATTCGAACTCACGATCTCTGGAT-T-GACAGTCAGACGCGC-TAA----CGACTGAGC-TTATCGGG
gi|164328 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGTGGGAGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGACCCG
gi|164330 : AGACAAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164333 : AGACAAATGATAACGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATCTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--GAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164340 : AGACGAATGACAATGAGACACAATG----CCGTATG--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAGCTCACGACCCCTGGAT-T-AATAGTCAGATGCA--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164343 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---TGACTGAGC-TAATCGGGCCCG
gi|164345 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164346 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGTAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGAG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164347 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCACCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGTG--TAAC---CGATTGAGC-TAATCGGG
gi|164348 : AGATGAATGATAATGATACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ACTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAAC-TAATCGGGCCC
gi|164349 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAATCAACACGGA--GACTGTTGCCGGGTGGGGGGTTCGAACTCACAACCCCTGGAT-T-GATAGTCAGATGCC--TAAC---CGACTTAGC-TAATCAGGCCCGGCT
gi|164352 : AGACGAATGATAATGAGACGCAATG----TCGTATT--ACAACCATCACGGA--GACAGTGGTCGGGC-TGGGATTCGAACTCACGAACCCTGGAT-T-GATAGTCAGACGCGC-TAA----CAACTGAGC-T
gi|164354 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGATTGAGC-TAATCGGGCCCGGCTA
gi|164355 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GGCTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATATTCAGACGCA--TAAC---TGACTGAGC-TAATCGGGCCCG
gi|164357 : AGACGAATGATAATGAAACACAATG----TCGTATA--CCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TATTCGGGCCCGGCT
gi|164362 : AGACGAATGATTATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCACTAGCT-T-GATAGTCAGACGCG--TATT---CGACTCAGC-TTATCGGGCCCG
gi|164363 : AGACGAATGATAATGAGACACAATG----TCGTATA--GCAATCATCACGGA--AACTGTTACCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACCAG--TTAC---CGACT
gi|164364 : AGACGAATGATAATGCGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGACGGGCGGGG-ATTCAAACTCACGGCCCCTGGAT-T-GATAGTCAGACAGG--TAAC---CGATTGAGC-TAATTGGGCCCGGCT
gi|164367 : AGACGAATGATAATGAGAAACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTAGAACTCACGACCCCTGGAT-T-GATTGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164369 : AGACGAATGATAGTGAGACACAATG----TCGTATA--TCAATCATAACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164370 : AGACGAATCATAATGAGACACAATG----TCATATA--TCAACCATCACGGA--TATTGTGGCCGGGC-GGGGATTCGAACTCTTGA-CCCTGGAT-T-GATAGTCAGACG-----AACTAACGATCGGGC-TTATCGGGCCCG
gi|164695 : AATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|163751 ): ATCATCATCATCACCAACAACAACAGCATCGTCAACATCATCATCACCATCATCATTTATGCAGTAATAGCGGCATCATCAGTTTAATCAACATCAGTAGCAACAGCTGCAACAGCTAATAAATAATCCCAATCAACAGTATTATCAGCACCACCAAACGGTCAAATCACTAACAACACAACTGTCAGCATAACTATCATTGCAATAGCCTCATATTACAATCACCATT
Unaligned ( gi|163618 ): ATCATCATCATCATCATCATCATCATCAACAATAACATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCANNNNNNNNNNCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCAACATCACCATCATCATCATTATCATCATCATCATCATCATCACCACCAC
Alignments
lowQualScore : 0000 00 11 2 3 0 0 11 000 0
lowQualScore : .... .. .. . . . . .. ... .
lowQualScore : 8888 55 00 9 9 4 4 77 777 4
consensus : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
Reference ( family-16 ) : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|163603 : ----TCGTCTA--TAGAT-AT-ACAGA--G--TGTTGCCGGG-AGGGGATTCAAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--
gi|163603 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaagAGACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGCGGGTCatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagcgggtcgtctag
gi|163604 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaagcgcgattgactatcaatccaatggtcatgcgtttgaatcccctcccggcaacactctgtatatctatCAATGGGATTCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCGTTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-gtctag
gi|163604 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccggAGACGAATCCCATTGAGACGCAATG----TCGTATA--ACAATTAACACGGAATGA--GTGGCTGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGAGGGTCCGTCTAagacgcaatgtcgtataacaattaacacggaatgagtggctgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagagggtccgtctag
gi|163608 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccgggctaagacggaagcgcgattgactatcaatccaacggtcatgcgttcgaatcccctcccggccacactctgtatatctatA--GAGTGTGGCCGGG-AGGAAATTCGAACGCACGACCATTGGAT-T-GATAGTCAACCGCG--g
gi|163608 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatAGAAGAATCCTAATGAGATGCAATG----TCGCATA--ACAATTAACACGGA--AAAAACGGCCGGGC-GGGGACTCGAACACACGGGTCCT-GATAT-AAAGGTCA---------AAC---CGACTAAAC-TTAGCGGGTCCGTCTAgtatatctatagaagaatcctaatgagatgcaatgtcgcataacaattaacacggaaaaaacggccgggcggggactcgaacacacgggtcctgatataaaggtcaaaccgactaaacttagcgggtccgtctag
gi|163609 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatcgcggttgactatcaatccaatggtcgtgcgttcgaatttcctcccggccacactctgtatatctat----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-g
gi|163609 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccggACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGTGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgtgtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtcta
gi|163610 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatac----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-
gi|163610 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccggACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtctag
gi|163611 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatac----TCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGA-AGGGGATTCGAACGCATGACCATTTGAT-T-GATAGTCAAACGCG--CTTC---CGTCTTAGC-g
gi|163611 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccggAGACGAATACCAATGAGACGCAATG----CCGTATA--ACAATAAATACGGA--AAGAGTGGCCGGGT-GGGGACTCGAACGCCCAGGCCCTGATT-T-GAAGGTC---------CAAC---CGACTAAGTATAGT-GGGCCCGTCTAataccaatgagacgcaatgccgtataacaataaatacggaaagagtggccgggtggggactcgaacgcccaggccctgatttgaaggtccaaccgactaagtatagtgggcccgtctag
gi|163612 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccgggctaagacggaagcgcgtttgactatcaatcaaatggtcatgcgttcgaatccccttccggccacactctgtatatctatA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATGGTCAGACTCG--CTTC---CGTCTTAGC-g
gi|163612 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccggAGACGAATCCCAATGAGGC------------GTATA--ACAATTAACACGGAAAGAGTGT--CTGGGCGGGT-ACTCGAACGCACGGGCTCTGATT-T-GAAGGTC---------TAAC---CGACTAAGC-TTAGCGGGCCCGTCTAgtatacatatagacgaatcccaatgaggcgtataacaattaacacggaaagagtgtctgggcgggtactcgaacgcacgggctctgatttgaaggtctaaccgactaagcttagcgggcccgtctag
gi|163613 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccgggctaagacggaagcgagtctgaccatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatacatatA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATTGCG--CTTC---CGTCTTAGC-g
gi|164184 : atcatcatcatcatcatcatcatcatcatcatcaatgataatcagcatcaatcatcataaatcgttcttttatgcagcaacaacagcataattcgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcttcatattataaccaccactccggAGACGAATGGTAATGAGACACAATG----TCGTATA--TCAGTCACCACGAG--GACTGTTGCCGGGCGGGG-ATTCGAACTTACGACCCCTGGAT-T-GAAATTCAGACGCG--TAAC---CGATTGAGC-TAATCGGGCCCGgtatatctatagatgggtcctgat
gi|164185 : acAGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAAATCACGACCCCTGTAT-T-GATAGTCAGACGCG--CAAC---CGACTGAGC-T
gi|164205 : atAGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-TATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGACTA
gi|164206 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGC-GGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTCAGACGCG--AAAC---CGACTGAGC-TTATTGGGCCCGg
gi|164208 : AGACGAATGCTAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164209 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGTCCCCTGGAT-T-GAAAGTCAGACGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164212 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164213 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTgg
gi|164215 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TTATCGGGCCCG
gi|164216 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164218 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCAAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164220 : AGACGAATGATAATGTGACACAATG----TTGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGATCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTAAGC-TAATCGGGCCCGGCTA
gi|164221 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGGT-T-GACAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164222 : AGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GATTGTTGCCGGGCTGGGGATTTGAATTCACGAACCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TCATCGGGCCCGGCT
gi|164223 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCAGGCGGGGG-TTTGAACTCACGACCCCTGAAT-T-GATAGTCAGATGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164227 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164228 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164232 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164233 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164234 : AGACGAATGATAATGAGACACAATG----TCGTTTA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCTA
gi|164236 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCACTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTAg
gi|164239 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATAATCACGGA--GACTGTTGCCGGAC-GGGGATTCGAACTCGCGACCCCTGAAT-T-GATAGTCAGAATCG--TAAC---CGACTGAGC-TAATCGGATCCGGCT
gi|164240 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAGTCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCATACGCG--TAAC---CGACTGAGC-TAACCGGGCCCG
gi|164241 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGTG--TAAC---TGACTGAGC-TGATCGGGCCCGACT
gi|164242 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCTATCATCACGGA--GACTGTCGCCGGGCGGGA-ATTCGAACTCACGAGCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGATCCGGCTA
gi|164243 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTTGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|164244 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTTAGACACG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164247 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAACTCACGACCCATGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164248 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGCCGGG--ATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164249 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATTGGACCCGGCT
gi|164251 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGAGC-GGGGATTCGAACTCACGACCCCTGGAT-A-GATAGTCAGAAGCG--TAAC---TGACTGAGC-TTATCGGGCCCGGCT
gi|164253 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGC-GGGGACTTGAACTCACGATCCCTGGAT-T-GATAGTCAGCCGCT--AAAC---CGACTAAGC-TAATCAGACCCGGCT
gi|164255 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164256 : AGACAAATGATAATGAGACGCAATG----ACGTATA--TCAAACATCACGGA--GATAGTGGCCGAGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-GATAGTCAGACACGCTTA-----CGACTGAGT-TTATCGGGCCC
gi|164258 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TTAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGGTGCG--ATAC---CGACTGAGC-TAATCGAACCCGGCTAatct
gi|164259 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164262 : AGACGAATGATAATGAGACACAGTG----TCGTATA--TCAATCACCACAAA--GAATGTGGCCGGGC-GGGGATTCGAACCAACTACGCCTGGCT-T-TATGATCAGACGCA--CTAC---TGACTGAGC-TTACCGGGTCCGGCTcta
gi|164264 : AGACGAATGATAATTAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGGCCCGGCT
gi|164267 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGG-ATTCGATCTCACGACCCCTGGAT-T-GATAGTCAGACTCA--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164270 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164271 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCG
gi|164273 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAGTTATCATGGA--GACTGTTGCCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATGGTCAAACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164276 : AGACAAATGATAATGAGACGCAATG----GCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGCCAGACGCA--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|164280 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-TGGATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164283 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGT-GGGGATTCGAACGCACGTCCCCTTGAT-T-GATAGTCAGTCGCG--TAAC---CGACTGAGC-TAATCGGGCCTGGCT
gi|164285 : AGACGAATAATACAGAGACGCAATG----TCGTATA--TTAATCATCACAGA--GATTGTGGCCGGGC-GGGGATTCGAACTCACGACCTCTGAAT-T-GATA---------G--TAAC---CGACTGAGC-TAATCGGGCCcta
gi|164289 : AGACGAATGATAACGAGACACAATG----TCGTATA--TAAATCATCACGGA--AACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CAACTAAGC-TAATCGGGCCCGGCT
gi|164290 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAAATCACGACCCCTGGAT-T-GATAATCAGATGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTAgg
gi|164291 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGAA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAACCGGGCCCGGCT
gi|164295 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGT--GACTGTTGCCGGGCGGGG-ATTCGAACTCAGGACCCCTGGAT-T-GATAGTCAGACGCT--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164296 : AGACGAATGACAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTGGCCGGGT-GGGGATTCGAACTCACGACCTCTGGAT-T-GAAAGTCAGATGCGC-TAA----TGACGGATC-TTATCGGATCCGG
gi|164299 : AGTCGAATGACAATGAGACACAATG----TCGTATA--TCGATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATTATCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCTtct
gi|164300 : AGACGAATAATAATGAGACGCAATG----ACGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACAGAGC-TAATCGGGCCCGGCT
gi|164305 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164306 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCCGGAT-T-GATAGACAGGCATG--TTAC---CGACTTAGC-TAATCGGG
gi|164308 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGTCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGTGCCCGttc
gi|164309 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGG-TAATCGGGGCC
gi|164311 : AGGCGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGGGC-TAATCGGGCCCGGCT
gi|164312 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTGTCATGGA--GAGTGTGACCGGTCGGCG-ATTCGAACTCACGACCCTTAAAC-T-GATAGCCAGACGTG--CTAC---CGACTGAGC-TAATCGGGTCCG
gi|164315 : AGACGAATGATAATGAGACACAATG----TCGTATATATCAATCATCACGGA--GACTGTGGCCGGGCGGGGAATTCGAACTCACGACCTCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCTGGCCCGGCTcc
gi|164316 : AGACGAATGATAATGAGACACAATG----CCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCTctag
gi|164317 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTTAGACATG--CAAC---CGACTGAGG-TAATCGGGCCCGGCT
gi|164318 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGA-ATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACATG--TAAC---CGACTGAGC-TAATCAGGCCCGGCTA
gi|164320 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAAGCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TCAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164321 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACAACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164323 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAA
gi|164325 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAATCATCTCGGA--GACTGTTGCCGAGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATTGGGCCCGTCTAg
gi|164326 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAG-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCTA
gi|164327 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAAACATCACGGA--GATTGTGGCCGAGC-GGGGATTCGAACTCACGATCTCTGGAT-T-GACAGTCAGACGCGC-TAA----CGACTGAGC-TTATCGGG
gi|164328 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGTGGGAGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGACCCG
gi|164330 : AGACAAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164333 : AGACAAATGATAACGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATCTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--GAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164340 : AGACGAATGACAATGAGACACAATG----CCGTATG--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAGCTCACGACCCCTGGAT-T-AATAGTCAGATGCA--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164343 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---TGACTGAGC-TAATCGGGCCCG
gi|164345 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164346 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGTAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGAG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164347 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCACCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGTG--TAAC---CGATTGAGC-TAATCGGG
gi|164348 : AGATGAATGATAATGATACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ACTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAAC-TAATCGGGCCC
gi|164349 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAATCAACACGGA--GACTGTTGCCGGGTGGGGGGTTCGAACTCACAACCCCTGGAT-T-GATAGTCAGATGCC--TAAC---CGACTTAGC-TAATCAGGCCCGGCT
gi|164352 : AGACGAATGATAATGAGACGCAATG----TCGTATT--ACAACCATCACGGA--GACAGTGGTCGGGC-TGGGATTCGAACTCACGAACCCTGGAT-T-GATAGTCAGACGCGC-TAA----CAACTGAGC-T
gi|164354 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGATTGAGC-TAATCGGGCCCGGCTA
gi|164355 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GGCTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATATTCAGACGCA--TAAC---TGACTGAGC-TAATCGGGCCCG
gi|164357 : AGACGAATGATAATGAAACACAATG----TCGTATA--CCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TATTCGGGCCCGGCT
gi|164362 : AGACGAATGATTATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCACTAGCT-T-GATAGTCAGACGCG--TATT---CGACTCAGC-TTATCGGGCCCG
gi|164363 : AGACGAATGATAATGAGACACAATG----TCGTATA--GCAATCATCACGGA--AACTGTTACCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACCAG--TTAC---CGACT
gi|164364 : AGACGAATGATAATGCGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGACGGGCGGGG-ATTCAAACTCACGGCCCCTGGAT-T-GATAGTCAGACAGG--TAAC---CGATTGAGC-TAATTGGGCCCGGCT
gi|164367 : AGACGAATGATAATGAGAAACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTAGAACTCACGACCCCTGGAT-T-GATTGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164369 : AGACGAATGATAGTGAGACACAATG----TCGTATA--TCAATCATAACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164370 : AGACGAATCATAATGAGACACAATG----TCATATA--TCAACCATCACGGA--TATTGTGGCCGGGC-GGGGATTCGAACTCTTGA-CCCTGGAT-T-GATAGTCAGACG-----AACTAACGATCGGGC-TTATCGGGCCCG
gi|164695 : AATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
blockSeqs : AT A G CT
blockSeqs : AA A G C
blockSeqs : . A G C
blockSeqs : . A A C
blockSeqs : . A G .
blockSeqs : . A G .
blockSeqs : . G G .
blockSeqs : . A G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . A G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . T G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . A G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G A .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . A G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G G .
blockSeqs : . G . .
blockSeqs : . G . .
blockSeqs : . G . .
blockSeqs : . G . .
blockSeqs : . G . .
blockSeqs : . G . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqCons :
originalCons : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
finalCons : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|163751 ): ATCATCATCATCACCAACAACAACAGCATCGTCAACATCATCATCACCATCATCATTTATGCAGTAATAGCGGCATCATCAGTTTAATCAACATCAGTAGCAACAGCTGCAACAGCTAATAAATAATCCCAATCAACAGTATTATCAGCACCACCAAACGGTCAAATCACTAACAACACAACTGTCAGCATAACTATCATTGCAATAGCCTCATATTACAATCACCATT
Unaligned ( gi|163618 ): ATCATCATCATCATCATCATCATCATCAACAATAACATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCANNNNNNNNNNCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCAACATCACCATCATCATCATTATCATCATCATCATCATCATCACCACCAC
Alignments
lowQualScore : 0000 00 11 2 3 0 0 11 000 0
lowQualScore : .... .. .. . . . . .. ... .
lowQualScore : 8888 55 00 9 9 4 4 77 777 4
consensus : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
Reference ( family-16 ) : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|163603 : ----TCGTCTA--TAGAT-AT-ACAGA--G--TGTTGCCGGG-AGGGGATTCAAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--
gi|163603 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaagAGACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGCGGGTCatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagcgggtcgtctag
gi|163604 : attatcattattatcattatcatcatcatcatcgatcattataatcatcaatcatcatcaatcgttattgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatctcatagttaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggataagacgaaagcgcgattgactatcaatccaatggtcatgcgtttgaatcccctcccggcaacactctgtatatctatCAATGGGATTCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCGTTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-gtctag
gi|163604 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccggAGACGAATCCCATTGAGACGCAATG----TCGTATA--ACAATTAACACGGAATGA--GTGGCTGGGC-GGGGACTCGAACGCACGGGCCCTGATT-T-GAAGATCA---------AAC---CGACTAAGC-TTAGAGGGTCCGTCTAagacgcaatgtcgtataacaattaacacggaatgagtggctgggcggggactcgaacgcacgggccctgatttgaagatcaaaccgactaagcttagagggtccgtctag
gi|163608 : atcatcatcatcatcattatcatcatcatcatcaatcataatcatcatcaatcatcatcaatcgtttttgtatgcagcaacaacagcataatctgtttaatcaatatcagtagcaacagatggtgcagcactataattatcacagtcagctgtattaacagaattatctcatagtcaaatcactaacaacacaactatcattataaatatcaactcaatatcatcatataataaccaccactccgggctaagacggaagcgcgattgactatcaatccaacggtcatgcgttcgaatcccctcccggccacactctgtatatctatA--GAGTGTGGCCGGG-AGGAAATTCGAACGCACGACCATTGGAT-T-GATAGTCAACCGCG--g
gi|163608 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatAGAAGAATCCTAATGAGATGCAATG----TCGCATA--ACAATTAACACGGA--AAAAACGGCCGGGC-GGGGACTCGAACACACGGGTCCT-GATAT-AAAGGTCA---------AAC---CGACTAAAC-TTAGCGGGTCCGTCTAgtatatctatagaagaatcctaatgagatgcaatgtcgcataacaattaacacggaaaaaacggccgggcggggactcgaacacacgggtcctgatataaaggtcaaaccgactaaacttagcgggtccgtctag
gi|163609 : atcattatcatcattatcattatcattatcatcaatgataatcatcatcaatcatcatcaatcgttattttatgcagcaacaacagcataatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcaaagtcaactgtattaacagaataatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcatcatattataaacaccactccgggctaagacggaatcgcggttgactatcaatccaatggtcgtgcgttcgaatttcctcccggccacactctgtatatctat----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-g
gi|163609 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccggACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGTGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgtgtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtcta
gi|163610 : atcattattatcatcatcatcatcatcatcatcaatcataatcatcctcaatcataatcaatcattattttatgcagcaacaacagcattatttgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacaatcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataaccaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatac----TCGTGTA--TAGAT-AT-ACAGA--G--TGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATCGCG--CTTC---CGTCTTAGC-
gi|163610 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccggACGAATCCCAATGAGACGCAATG----TCGTATA--ACAATTAACACGGA--AAGAGTGGCCGGGC-GGGGACTCGAACGCACGGGTCCTGATT-T-AAAGGTCA---------AAC---CGACTAAGC-TTAGCGGGTCCGTCTAatcccaatgagacgcaatgtcgtataacaattaacacggaaagagtggccgggcggggactcgaacgcacgggtcctgatttaaaggtcaaaccgactaagcttagcgggtccgtctag
gi|163611 : ataattatcatcatcaacatcatcatcatcatcaatcataatcatcatcaatcataatcaatcgttattttatgcagcaacagcagcatattttgtttaatcaatatcagaagcaatacatgtagcagcactataattatcacattcaactgcattaacagaatcatcaactgtcattataaatatcatctcaatatcatcatattataatcaccactccgggctaagacggaagcgcgattgactatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatatctatac----TCGTCTA--TAGAT-AT-ACAGA--G--TGTGGCCGGA-AGGGGATTCGAACGCATGACCATTTGAT-T-GATAGTCAAACGCG--CTTC---CGTCTTAGC-g
gi|163611 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccggAGACGAATACCAATGAGACGCAATG----CCGTATA--ACAATAAATACGGA--AAGAGTGGCCGGGT-GGGGACTCGAACGCCCAGGCCCTGATT-T-GAAGGTC---------CAAC---CGACTAAGTATAGT-GGGCCCGTCTAataccaatgagacgcaatgccgtataacaataaatacggaaagagtggccgggtggggactcgaacgcccaggccctgatttgaaggtccaaccgactaagtatagtgggcccgtctag
gi|163612 : accaccattaccattatctgcatcattatcatcatcatcgtcgtcatcaatcatcatcagtcgttattgtatgcagcaacaacagcataatgtgtttaatcaatatcagtagcaacaatgtaacagcactataattatcacagtcaactgtattaacagaatcatcgcaaggtgaaatcactaacaacacaactgtcattataaatatcatcttaatatcgtcatattataaccaccactccgggctaagacggaagcgcgtttgactatcaatcaaatggtcatgcgttcgaatccccttccggccacactctgtatatctatA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATGGTCAGACTCG--CTTC---CGTCTTAGC-g
gi|163612 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccggAGACGAATCCCAATGAGGC------------GTATA--ACAATTAACACGGAAAGAGTGT--CTGGGCGGGT-ACTCGAACGCACGGGCTCTGATT-T-GAAGGTC---------TAAC---CGACTAAGC-TTAGCGGGCCCGTCTAgtatacatatagacgaatcccaatgaggcgtataacaattaacacggaaagagtgtctgggcgggtactcgaacgcacgggctctgatttgaaggtctaaccgactaagcttagcgggcccgtctag
gi|163613 : accattatctgcatcattatcataatcattatcaatcataatcatcatcaatcatcatcaatcgttattgtatgcagcaacaacagaataatcaatttgtaactgtattaatcaatttgcaactgtattaacagaattatcgcatagtcaaatcactaacaacacaactgtcattataaatatcatctcaatatcgtcatattataaccaccactccgggctaagacggaagcgagtctgaccatcaatccaatggtcatgcgttcgaatcccctcccggccacactctgtatacatatA--GAGTGTGGCCGGG-AGGGGATTCGAACGCATGACCATTGGAT-T-GATAGTCAATTGCG--CTTC---CGTCTTAGC-g
gi|164184 : atcatcatcatcatcatcatcatcatcatcatcaatgataatcagcatcaatcatcataaatcgttcttttatgcagcaacaacagcataattcgtttaatcaatatcagtagcaacagatgtagcagcactataattatcacagtcaactgtattaacagaatcatcaactgtcattataaatatcatctcaatatcttcatattataaccaccactccggAGACGAATGGTAATGAGACACAATG----TCGTATA--TCAGTCACCACGAG--GACTGTTGCCGGGCGGGG-ATTCGAACTTACGACCCCTGGAT-T-GAAATTCAGACGCG--TAAC---CGATTGAGC-TAATCGGGCCCGgtatatctatagatgggtcctgat
gi|164185 : acAGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAAATCACGACCCCTGTAT-T-GATAGTCAGACGCG--CAAC---CGACTGAGC-T
gi|164205 : atAGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-TATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGACTA
gi|164206 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGC-GGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTCAGACGCG--AAAC---CGACTGAGC-TTATTGGGCCCGg
gi|164208 : AGACGAATGCTAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164209 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGTCCCCTGGAT-T-GAAAGTCAGACGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164212 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164213 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTgg
gi|164215 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TTATCGGGCCCG
gi|164216 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164218 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCAAACTCACGACCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164220 : AGACGAATGATAATGTGACACAATG----TTGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGATCCCTGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTAAGC-TAATCGGGCCCGGCTA
gi|164221 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGGT-T-GACAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164222 : AGACGAATGCTAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GATTGTTGCCGGGCTGGGGATTTGAATTCACGAACCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TCATCGGGCCCGGCT
gi|164223 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCAGGCGGGGG-TTTGAACTCACGACCCCTGAAT-T-GATAGTCAGATGTG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164227 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164228 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164232 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCT
gi|164233 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164234 : AGACGAATGATAATGAGACACAATG----TCGTTTA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCTA
gi|164236 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCACTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTAg
gi|164239 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATAATCACGGA--GACTGTTGCCGGAC-GGGGATTCGAACTCGCGACCCCTGAAT-T-GATAGTCAGAATCG--TAAC---CGACTGAGC-TAATCGGATCCGGCT
gi|164240 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAGTCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCATACGCG--TAAC---CGACTGAGC-TAACCGGGCCCG
gi|164241 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGTG--TAAC---TGACTGAGC-TGATCGGGCCCGACT
gi|164242 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCTATCATCACGGA--GACTGTCGCCGGGCGGGA-ATTCGAACTCACGAGCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGT-TAATCGGATCCGGCTA
gi|164243 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GAATGTTGCCGGGCGGGGGATTTGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|164244 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTTAGACACG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164247 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAACTCACGACCCATGGAT-T-GAAAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164248 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGCCGGG--ATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164249 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATTGGACCCGGCT
gi|164251 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGAGC-GGGGATTCGAACTCACGACCCCTGGAT-A-GATAGTCAGAAGCG--TAAC---TGACTGAGC-TTATCGGGCCCGGCT
gi|164253 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGC-GGGGACTTGAACTCACGATCCCTGGAT-T-GATAGTCAGCCGCT--AAAC---CGACTAAGC-TAATCAGACCCGGCT
gi|164255 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164256 : AGACAAATGATAATGAGACGCAATG----ACGTATA--TCAAACATCACGGA--GATAGTGGCCGAGCGGGG-ATTCGAACTCACGACCCCTTGAT-T-GATAGTCAGACACGCTTA-----CGACTGAGT-TTATCGGGCCC
gi|164258 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TTAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGGTGCG--ATAC---CGACTGAGC-TAATCGAACCCGGCTAatct
gi|164259 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164262 : AGACGAATGATAATGAGACACAGTG----TCGTATA--TCAATCACCACAAA--GAATGTGGCCGGGC-GGGGATTCGAACCAACTACGCCTGGCT-T-TATGATCAGACGCA--CTAC---TGACTGAGC-TTACCGGGTCCGGCTcta
gi|164264 : AGACGAATGATAATTAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGGCCCGGCT
gi|164267 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGG-ATTCGATCTCACGACCCCTGGAT-T-GATAGTCAGACTCA--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164270 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164271 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACAGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGATGCG--TAAC---CGACTGAGC-TAATCAGGCCCG
gi|164273 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAGTTATCATGGA--GACTGTTGCCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATGGTCAAACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164276 : AGACAAATGATAATGAGACGCAATG----GCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGCCAGACGCA--TAAC---CGACTGAGC-TAATCGGGTCCG
gi|164280 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-TGGATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164283 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGT-GGGGATTCGAACGCACGTCCCCTTGAT-T-GATAGTCAGTCGCG--TAAC---CGACTGAGC-TAATCGGGCCTGGCT
gi|164285 : AGACGAATAATACAGAGACGCAATG----TCGTATA--TTAATCATCACAGA--GATTGTGGCCGGGC-GGGGATTCGAACTCACGACCTCTGAAT-T-GATA---------G--TAAC---CGACTGAGC-TAATCGGGCCcta
gi|164289 : AGACGAATGATAACGAGACACAATG----TCGTATA--TAAATCATCACGGA--AACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CAACTAAGC-TAATCGGGCCCGGCT
gi|164290 : AAACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCTGGGCGGGG-ATTCAAAATCACGACCCCTGGAT-T-GATAATCAGATGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTAgg
gi|164291 : AGACGAATGATAATGAGACACAATG----TCATATA--TCAATCATCACGAA--GACTGTTGCCGGGCAGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAACCGGGCCCGGCT
gi|164295 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGT--GACTGTTGCCGGGCGGGG-ATTCGAACTCAGGACCCCTGGAT-T-GATAGTCAGACGCT--TAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164296 : AGACGAATGACAATGAGACACAATG----TCATATA--TCAATCATCACGGA--GACTGTGGCCGGGT-GGGGATTCGAACTCACGACCTCTGGAT-T-GAAAGTCAGATGCGC-TAA----TGACGGATC-TTATCGGATCCGG
gi|164299 : AGTCGAATGACAATGAGACACAATG----TCGTATA--TCGATCATCACGGA--GACTATTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATTATCAGACGCG--TAAC---CGACTGAGT-TAATCGGGCCCGGCTtct
gi|164300 : AGACGAATAATAATGAGACGCAATG----ACGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACAGAGC-TAATCGGGCCCGGCT
gi|164305 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164306 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCCGGAT-T-GATAGACAGGCATG--TTAC---CGACTTAGC-TAATCGGG
gi|164308 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--AACTGTTGTCGGGCGGGG-ATTTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGTGCCCGttc
gi|164309 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGG-TAATCGGGGCC
gi|164311 : AGGCGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGATCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGGGC-TAATCGGGCCCGGCT
gi|164312 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATTGTCATGGA--GAGTGTGACCGGTCGGCG-ATTCGAACTCACGACCCTTAAAC-T-GATAGCCAGACGTG--CTAC---CGACTGAGC-TAATCGGGTCCG
gi|164315 : AGACGAATGATAATGAGACACAATG----TCGTATATATCAATCATCACGGA--GACTGTGGCCGGGCGGGGAATTCGAACTCACGACCTCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCTGGCCCGGCTcc
gi|164316 : AGACGAATGATAATGAGACACAATG----CCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCAGGCCCGGCTctag
gi|164317 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACCCACGACCCCTGGAT-T-GATAGTTAGACATG--CAAC---CGACTGAGG-TAATCGGGCCCGGCT
gi|164318 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCAGGCGGGA-ATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACATG--TAAC---CGACTGAGC-TAATCAGGCCCGGCTA
gi|164320 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAAGCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TCAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164321 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCAGGGGATTCGAACTCACAACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164323 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAA
gi|164325 : AGACGAATGATAATGAGACACAATG----TTGTATA--TCAATCATCTCGGA--GACTGTTGCCGAGTGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATTGGGCCCGTCTAg
gi|164326 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAG-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCTA
gi|164327 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAAACATCACGGA--GATTGTGGCCGAGC-GGGGATTCGAACTCACGATCTCTGGAT-T-GACAGTCAGACGCGC-TAA----CGACTGAGC-TTATCGGG
gi|164328 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGTGGGAGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TTATCGGACCCG
gi|164330 : AGACAAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGTCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAATCAGACGCG--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164333 : AGACAAATGATAACGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATCTGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCA--GAAC---CGACTGAGC-TAATCGGGCCCGGCT
gi|164340 : AGACGAATGACAATGAGACACAATG----CCGTATG--TCAATCATCACGGA--GACTGTTGCCGGGCGGGA-ATTCGAGCTCACGACCCCTGGAT-T-AATAGTCAGATGCA--TAAC---CGACTGAGC-TAATCGGACCCGGCT
gi|164343 : AGACGAATGAAAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---TGACTGAGC-TAATCGGGCCCG
gi|164345 : AGATGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164346 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGTAGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGAG--TAAC---CGACTGAGC-TAATCGGGCCC
gi|164347 : AGACGAATGATAATGAGACGCAATG----TCGTATA--TCAATCACCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGTG--TAAC---CGATTGAGC-TAATCGGG
gi|164348 : AGATGAATGATAATGATACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ACTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAAC-TAATCGGGCCC
gi|164349 : AGACAAATGATAATGAGACGCAATG----TCGTATA--TCAATCAACACGGA--GACTGTTGCCGGGTGGGGGGTTCGAACTCACAACCCCTGGAT-T-GATAGTCAGATGCC--TAAC---CGACTTAGC-TAATCAGGCCCGGCT
gi|164352 : AGACGAATGATAATGAGACGCAATG----TCGTATT--ACAACCATCACGGA--GACAGTGGTCGGGC-TGGGATTCGAACTCACGAACCCTGGAT-T-GATAGTCAGACGCGC-TAA----CAACTGAGC-T
gi|164354 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGTGGGGGATTCGAACTCATGACCCCTGGAT-T-GATAGTCAGACGCA--TAAC---CGATTGAGC-TAATCGGGCCCGGCTA
gi|164355 : AGACGAATGATAATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GGCTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATATTCAGACGCA--TAAC---TGACTGAGC-TAATCGGGCCCG
gi|164357 : AGACGAATGATAATGAAACACAATG----TCGTATA--CCAATCATCACGGA--GACTGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TATTCGGGCCCGGCT
gi|164362 : AGACGAATGATTATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGC-GGGGATTCGAACTCACGACCACTAGCT-T-GATAGTCAGACGCG--TATT---CGACTCAGC-TTATCGGGCCCG
gi|164363 : AGACGAATGATAATGAGACACAATG----TCGTATA--GCAATCATCACGGA--AACTGTTACCGGGC-GGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACCAG--TTAC---CGACT
gi|164364 : AGACGAATGATAATGCGACACAATG----TCGTATA--TCAATTATCACGGA--GACTGTTGACGGGCGGGG-ATTCAAACTCACGGCCCCTGGAT-T-GATAGTCAGACAGG--TAAC---CGATTGAGC-TAATTGGGCCCGGCT
gi|164367 : AGACGAATGATAATGAGAAACAATG----TCATATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTAGAACTCACGACCCCTGGAT-T-GATTGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCGGCTA
gi|164369 : AGACGAATGATAGTGAGACACAATG----TCGTATA--TCAATCATAACGGA--GAATGTTGCCGGGCGGGGGATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGCCCG
gi|164370 : AGACGAATCATAATGAGACACAATG----TCATATA--TCAACCATCACGGA--TATTGTGGCCGGGC-GGGGATTCGAACTCTTGA-CCCTGGAT-T-GATAGTCAGACG-----AACTAACGATCGGGC-TTATCGGGCCCG
gi|164695 : AATGAGACACAATG----TCGTATA--TCAATCATCACGGA--GACTGTTGCCGGGCGGGG-ATTCGAACTCACGACCCCTGGAT-T-GATAGTCAGACGCG--TAAC---CGACTGAGC-TAATCGGGTCCG
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|163751 ): ATCATCATCATCACCAACAACAACAGCATCGTCAACATCATCATCACCATCATCATTTATGCAGTAATAGCGGCATCATCAGTTTAATCAACATCAGTAGCAACAGCTGCAACAGCTAATAAATAATCCCAATCAACAGTATTATCAGCACCACCAAACGGTCAAATCACTAACAACACAACTGTCAGCATAACTATCATTGCAATAGCCTCATATTACAATCACCATT
Unaligned ( gi|163618 ): ATCATCATCATCATCATCATCATCATCAACAATAACATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCANNNNNNNNNNCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCACCAACATCACCATCATCATCATTATCATCATCATCATCATCATCACCACCAC